Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0010845

Physical Location & Seq

Genomic Coordinates Forward (+)

73991964 .. 73997341

Gene Structure 5378 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG463100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGAGTTTTTAGGTGTCGGAATTCGGAAAAGCTATGGAGGTTTGTGGGCTAAATTGGCAATTTTACTGTTTCTGTGTACTATTGAACGAGCGGTGTGCGATTCCGACTATTTGATTGGGCTCGGGAGCTATGACATCACCGGACCGGCCGCTGATGTCAATATGATGGGGTATGCTAACACGGAGCAGATCGCTTCCGGAGTTCACTTCAGGCTGCGAGCTCGCTCGTTCATTGTGGCGGAGCCGAAGGGCAACCGAGTGGTGTTTGTGAATCTTGATGCTTGCATGGCCTCGCAGCTTGTGAAATTGAAAGTGATTGAGAGGTTGAAGGCAAGGTATGGGGATCTATACACTGAGAAGAATGTAGCTATTAGTGGAATTCACACCCATGCTGGCCCTGGGGGTTATCTACAGTATATTGTGTATATTGTAACATCTCTCGGGTTTGTGCGTCAGTCATTTGATGCCCTTGTTGATGGCATTGAGCAAAGCGTTATTCAAGCCCATGAAAATCTTGCGCCAGGATCAGTTTTTATTAATAAGGGAGAAATCTTAGATGCTGGAGTAAACCGTAGTCCTAGTGCTTATCTCAATAATCCTGCAGCAGAGCGCAGTAAATACAAATATGATGTCGATAAAGAAATGACTCTTCTGAAGTTTGTCGATAATCAATGGGGTCCAGTGGGTAGCTTCAATTGGTTTGCAACTCATGGAACTTCCATGAGTCGGACAAACTCATTAATTAGTGGGGATAACAAGGGTGCTGCTGCACGATTTATGGAAGACTGGTTTGAGGAGAATGGTGGTAGAAGTGCATATTCTGATGATATTGATGCTGCCGATATACCGCGAAGAGTGTCAAACATAGTTTCTGACCATCATGATAATCACCATGAGTTACTGGAGCTTGCTGCATCCTTTCAGTCTCCTCCTGGTAAGCCAGCAACCAGGTCCTTGAGTGTTGCAAGACGTGTCAGGGGTGTACTAAGGCAGGCTAACAAGCCTAGATTTTTTTCTGCCTTTTGTCAATCAAACTGTGGTGATGTGAGCCCAAATGTTCTAGGAGCTTTCTGCACAGATACTGGGCTACCTTGTGATTTCAATCACAGCACCTGTGGTGGGAAGAATGAGTTGTGCTATGGCCGAGGACCGGGTTACCCAGATGAATTTGAAAGTACACGTATTATTGCTGAGAGGCAACTGAGAAAAGCTGTGGATCTTTTCAACAAAGCATCTGAACAGTTGACCGGGAAGATTGAATATCGCCACACTTACCTCAACTTCTCCCAGCTTGAAGTAACCCTTCCCAAGAAGGGGGGAGGTTCTGAGGTGGTAAAGACATGTCCTGCTGCAATGGGATTTGGATTTGCTGCTGGAACCACTGATGGACCTGGAGCTTTTGATTTCAAGCAAGGGGATGATAAGGGAAATCCTTTCTGGAGATTAGTGCGCAATGTACTCAAAACACCAGGCCAGGAACAAATTGATTGTCAGAGTCCAAAGCCAATCTTGCTTGATACTGGTGAAATGAAGCAACCATATGACTGGGCGCCTTCAATACTTCCAATTCAGATCTTCCGGATAGGGCAGCTTGTCATTCTCAGTGTACCTGGAGGTAGTAATCCTGCTTCTCCTTCACTAATTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005794 GO:0006950 GO:0006979 GO:0008150 GO:0009987 GO:0012505 GO:0016020 GO:0019725 GO:0031090 GO:0033554 GO:0034599 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050896 GO:0051716 GO:0055082 GO:0055088 GO:0065007 GO:0065008 GO:0070887 GO:0090156 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko00600 ko01100 ko04071 map00600 map01100 map04071

Pfam Domains

Protein Families

Ceramidase_alk Ceramidse_alk_C

Protein Analysis

549

Amino Acids

60.06

Weight (kDa)

6.83

Isoelectric Point (pI)

42.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ceramidase_alk	PF04734	37 - 538	7.7e-189	Neutral/alkaline non-lysosomal ceramidase, N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010845)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07380 AT1G07380 AT5G58980
fragaria_vesca	FvH4_3g37680
malus_domestica	MD03G1079000.v1.1
prunus_persica	Prupe.6G063600_v2.0.a1
pyrus_communis	pycom03g06300
rosa_chinensis	RchiOBHm_Chr5g0067951
rosa_laevigata	RLG00000035946
rosa_multiflora	Rmu_sc0000435.1_g000039
rosa_roxburghii	Rroxscaffold_1G00012650 Rroxscaffold_1G00013360
rosa_rugosa	Rorug05G0386600 Rorug05G0386700
rosa_samantha	Rh5AG445600 Rh5BG463100 Rh5CG485000 Rh5DG477100
rosa_wichuraiana	Rw0G015370 Rw5G041610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1451
AccB1I	GGYRCC	1 cut(s)	1549
AccBSI	CCGCTC	1 cut(s)	92
AccII	CGCG	1 cut(s)	850
AccIII	TCCGGA	2 cut(s)	197, 1578
AciI	CCGC	4 cut(s)	92, 150, 239, 848
AclWI	GGATC	3 cut(s)	351, 532, 1224
AcoI	YGGCCR	2 cut(s)	147, 1141
AcsI	RAATTY	3 cut(s)	21, 378, 1166
AcuI	CTGAAG	2 cut(s)	193, 674
AcyI	GRCGYC	1 cut(s)	1550
AfaI	GTAC	5 cut(s)	79, 984, 1177, 1458, 1608
AfiI	CCNNNNNNNGG	5 cut(s)	726, 1119, 1150, 1313, 1314
AflIII	ACRYGT	3 cut(s)	970, 1178, 1340
AjiI	CACGTC	1 cut(s)	971
AjnI	CCWGG	8 cut(s)	397, 520, 931, 947, 1390, 1468, 1473, 1609
Alw21I	GWGCWC	1 cut(s)	223
Alw26I	GTCTC	1 cut(s)	930
AlwI	GGATC	3 cut(s)	351, 532, 1224
AlwNI	CAGNNNCTG	2 cut(s)	1082, 1113
Ama87I	CYCGRG	2 cut(s)	122, 440
Aor13HI	TCCGGA	2 cut(s)	197, 1578
AoxI	GGCC	5 cut(s)	147, 288, 394, 1141, 1471
ApoI	RAATTY	3 cut(s)	21, 378, 1166
ArsI	GACNNNNNNTTYG	4 cut(s)	615, 647, 1474, 1506
AseI	ATTAAT	2 cut(s)	537, 740
AspLEI	GCGC	4 cut(s)	520, 612, 1452, 1552
AspS9I	GGNCC	6 cut(s)	143, 395, 677, 951, 1148, 1388
AsuC2I	CCSGG	2 cut(s)	1152, 1249
AsuHPI	GGTGA	4 cut(s)	130, 881, 1052, 1535
AvaI	CYCGRG	2 cut(s)	122, 440
AvaII	GGWCC	5 cut(s)	143, 677, 951, 1148, 1388
BanI	GGYRCC	1 cut(s)	1549
BanII	GRGCYC	3 cut(s)	123, 223, 1052
BarI	GAAGNNNNNNTAC	2 cut(s)	1612, 1644
BbsI	GAAGAC	1 cut(s)	789
Bbv12I	GWGCWC	1 cut(s)	223
BccI	CCATC	4 cut(s)	160, 470, 885, 1379
BcgI	CGANNNNNNTGC	2 cut(s)	78, 112
BciT130I	CCWGG	8 cut(s)	399, 522, 933, 949, 1392, 1470, 1475, 1611
BcnI	CCSGG	2 cut(s)	1152, 1249
BcoDI	GTCTC	1 cut(s)	930
BfaI	CTAG	3 cut(s)	579, 1005, 1061
BfmI	CTRYAG	2 cut(s)	410, 600
BfoI	RGCGCY	1 cut(s)	1553
BglII	AGATCT	1 cut(s)	1572
Bme18I	GGWCC	5 cut(s)	143, 677, 951, 1148, 1388
BmeT110I	CYCGRG	2 cut(s)	122, 440
BmgBI	CACGTC	1 cut(s)	971
BmgT120I	GGNCC	6 cut(s)	143, 395, 677, 951, 1148, 1388
BmiI	GGNNCC	4 cut(s)	243, 678, 1378, 1551
BmrI	ACTGGG	2 cut(s)	1092, 1555
BmsI	GCATC	6 cut(s)	268, 454, 547, 823, 923, 1241
BmuI	ACTGGG	2 cut(s)	1092, 1555
BpiI	GAAGAC	1 cut(s)	789
BpmI	CTGGAG	5 cut(s)	582, 923, 1413, 1459, 1632
BpuEI	CTTGAG	1 cut(s)	976
BpuMI	CCSGG	2 cut(s)	1152, 1249
BsaAI	YACGTR	1 cut(s)	1181
BsaBI	GATNNNNATC	1 cut(s)	1101
BsaHI	GRCGYC	1 cut(s)	1550
BsaJI	CCNNGG	3 cut(s)	397, 398, 1144
BsaWI	WCCGGW	3 cut(s)	140, 197, 1578
Bsc4I	CCNNNNNNNGG	5 cut(s)	726, 1119, 1150, 1313, 1314
Bse118I	RCCGGY	1 cut(s)	145
Bse1I	ACTGG	6 cut(s)	680, 791, 906, 1087, 1525, 1550
Bse3DI	GCAATG	2 cut(s)	1359, 1459
Bse8I	GATNNNNATC	1 cut(s)	1101
BseAI	TCCGGA	2 cut(s)	197, 1578
BseBI	CCWGG	8 cut(s)	399, 522, 933, 949, 1392, 1470, 1475, 1611
BseDI	CCNNGG	3 cut(s)	397, 398, 1144
BseGI	GGATG	2 cut(s)	914, 1423
BseJI	GATNNNNATC	1 cut(s)	1101
BseLI	CCNNNNNNNGG	5 cut(s)	726, 1119, 1150, 1313, 1314
BseMI	GCAATG	2 cut(s)	1359, 1459
BseMII	CTCAG	5 cut(s)	345, 1182, 1193, 1317, 1615
BseNI	ACTGG	6 cut(s)	680, 791, 906, 1087, 1525, 1550
BseRI	GAGGAG	2 cut(s)	809, 918
BseX3I	CGGCCG	1 cut(s)	147
BseYI	CCCAGC	1 cut(s)	1287
BsgI	GTGCAG	2 cut(s)	753, 1057
Bsh1236I	CGCG	1 cut(s)	850
Bsh1285I	CGRYCG	1 cut(s)	150
BshFI	GGCC	5 cut(s)	149, 290, 396, 1143, 1473
BshNI	GGYRCC	1 cut(s)	1549
BsiEI	CGRYCG	1 cut(s)	150
BsiHKAI	GWGCWC	1 cut(s)	223
BsiHKCI	CYCGRG	2 cut(s)	122, 440
BsiSI	CCGG	6 cut(s)	141, 146, 198, 1151, 1248, 1579
BslI	CCNNNNNNNGG	5 cut(s)	726, 1119, 1150, 1313, 1314
BsmAI	GTCTC	1 cut(s)	930
BsnI	GGCC	5 cut(s)	149, 290, 396, 1143, 1473
BsoBI	CYCGRG	2 cut(s)	122, 440
Bsp1286I	GDGCHC	3 cut(s)	123, 223, 1052
Bsp13I	TCCGGA	2 cut(s)	197, 1578
Bsp143I	GATC	5 cut(s)	189, 343, 524, 1216, 1572
BspACI	CCGC	4 cut(s)	92, 150, 239, 848
BspANI	GGCC	5 cut(s)	149, 290, 396, 1143, 1473
BspCNI	CTCAG	5 cut(s)	346, 1183, 1194, 1318, 1614
BspEI	TCCGGA	2 cut(s)	197, 1578
BspFNI	CGCG	1 cut(s)	850
BspHI	TCATGA	1 cut(s)	880
BspLI	GGNNCC	4 cut(s)	243, 678, 1378, 1551
BspMAI	CTGCAG	1 cut(s)	604
BspPI	GGATC	3 cut(s)	351, 532, 1224
BspT107I	GGYRCC	1 cut(s)	1549
BsrBI	CCGCTC	1 cut(s)	92
BsrDI	GCAATG	2 cut(s)	1359, 1459
BsrFI	RCCGGY	1 cut(s)	145
BsrI	ACTGG	6 cut(s)	680, 791, 906, 1087, 1525, 1550
BssAI	RCCGGY	1 cut(s)	145
BssECI	CCNNGG	3 cut(s)	397, 398, 1144
BssMI	GATC	5 cut(s)	189, 343, 524, 1216, 1572
BssNI	GRCGYC	1 cut(s)	1550
Bst2UI	CCWGG	8 cut(s)	399, 522, 933, 949, 1392, 1470, 1475, 1611
Bst4CI	ACNGT	5 cut(s)	69, 414, 572, 1037, 1242
Bst6I	CTCTTC	2 cut(s)	654, 847
BstACI	GRCGYC	1 cut(s)	1550
BstBAI	YACGTR	1 cut(s)	1181
BstC8I	GCNNGC	7 cut(s)	219, 223, 283, 394, 909, 942, 993
BstDEI	CTNAG	7 cut(s)	354, 553, 986, 1191, 1202, 1326, 1601
BstEII	GGTNACC	1 cut(s)	1154
BstF5I	GGATG	2 cut(s)	914, 1423
BstFNI	CGCG	1 cut(s)	850
BstH2I	RGCGCY	1 cut(s)	1553
BstHHI	GCGC	4 cut(s)	520, 612, 1452, 1552
BstKTI	GATC	5 cut(s)	192, 346, 527, 1219, 1575
BstMAI	GTCTC	1 cut(s)	930
BstMBI	GATC	5 cut(s)	189, 343, 524, 1216, 1572
BstMCI	CGRYCG	1 cut(s)	150
BstMWI	GCNNNNNNNGC	3 cut(s)	56, 287, 1510
BstNI	CCWGG	8 cut(s)	399, 522, 933, 949, 1392, 1470, 1475, 1611
BstNSI	RCATGY	1 cut(s)	1344
BstPI	GGTNACC	1 cut(s)	1154
BstSFI	CTRYAG	2 cut(s)	410, 600
BstUI	CGCG	1 cut(s)	850
BstV2I	GAAGAC	1 cut(s)	789
BstX2I	RGATCY	3 cut(s)	343, 1216, 1572
BstXI	CCANNNNNNTGG	1 cut(s)	1545
BstYI	RGATCY	3 cut(s)	343, 1216, 1572
BstZI	CGGCCG	1 cut(s)	147
BsuRI	GGCC	5 cut(s)	149, 290, 396, 1143, 1473
BtrI	CACGTC	1 cut(s)	971
BtsCI	GGATG	2 cut(s)	914, 1423
BtsIMutI	CAGTG	4 cut(s)	351, 687, 1380, 1609
Cac8I	GCNNGC	7 cut(s)	219, 223, 283, 394, 909, 942, 993
CaiI	CAGNNNCTG	2 cut(s)	1082, 1113
CciI	TCATGA	1 cut(s)	880
CfoI	GCGC	4 cut(s)	520, 612, 1452, 1552
Cfr10I	RCCGGY	1 cut(s)	145
Cfr13I	GGNCC	6 cut(s)	143, 395, 677, 951, 1148, 1388
CpoI	CGGWCCG	1 cut(s)	143
CseI	GACGC	1 cut(s)	440
CsiI	ACCWGGT	1 cut(s)	947
Csp6I	GTAC	5 cut(s)	78, 983, 1176, 1457, 1607
CspI	CGGWCCG	1 cut(s)	143
CviAII	CATG	8 cut(s)	286, 389, 506, 710, 721, 881, 893, 1341
CviQI	GTAC	5 cut(s)	78, 983, 1176, 1457, 1607
DdeI	CTNAG	7 cut(s)	354, 553, 986, 1191, 1202, 1326, 1601
DinI	GGCGCC	1 cut(s)	1551
DpnI	GATC	5 cut(s)	191, 345, 526, 1218, 1574
DpnII	GATC	5 cut(s)	189, 343, 524, 1216, 1572
EaeI	YGGCCR	2 cut(s)	147, 1141
EagI	CGGCCG	1 cut(s)	147
Eam1104I	CTCTTC	2 cut(s)	654, 847
EarI	CTCTTC	2 cut(s)	654, 847
EciI	GGCGGA	1 cut(s)	254
Ecl136II	GAGCTC	1 cut(s)	221
EclXI	CGGCCG	1 cut(s)	147
Eco24I	GRGCYC	3 cut(s)	123, 223, 1052
Eco47I	GGWCC	5 cut(s)	143, 677, 951, 1148, 1388
Eco52I	CGGCCG	1 cut(s)	147
Eco53kI	GAGCTC	1 cut(s)	221
Eco57I	CTGAAG	2 cut(s)	193, 674
Eco88I	CYCGRG	2 cut(s)	122, 440
Eco91I	GGTNACC	1 cut(s)	1154
EcoICRI	GAGCTC	1 cut(s)	221
EcoO109I	RGGNCCY	1 cut(s)	951
EcoO65I	GGTNACC	1 cut(s)	1154
EcoRI	GAATTC	2 cut(s)	21, 378
EcoRII	CCWGG	8 cut(s)	397, 520, 931, 947, 1390, 1468, 1473, 1609
EcoT38I	GRGCYC	3 cut(s)	123, 223, 1052
EgeI	GGCGCC	1 cut(s)	1551
EheI	GGCGCC	1 cut(s)	1551
FaeI	CATG	8 cut(s)	289, 392, 509, 713, 724, 884, 896, 1344
FalI	AAGNNNNNCTT	4 cut(s)	1287, 1319, 1493, 1525
FatI	CATG	8 cut(s)	285, 388, 505, 709, 720, 880, 892, 1340
FauNDI	CATATG	1 cut(s)	1540
FokI	GGATG	2 cut(s)	901, 1430
FriOI	GRGCYC	3 cut(s)	123, 223, 1052
FspBI	CTAG	3 cut(s)	579, 1005, 1061
FspI	TGCGCA	1 cut(s)	1451
GlaI	GCGC	4 cut(s)	519, 611, 1451, 1551
GsaI	CCCAGC	1 cut(s)	1291
GsuI	CTGGAG	5 cut(s)	582, 923, 1413, 1459, 1632
HaeII	RGCGCY	1 cut(s)	1553
HaeIII	GGCC	5 cut(s)	149, 290, 396, 1143, 1473
HapII	CCGG	6 cut(s)	141, 146, 198, 1151, 1248, 1579
HgaI	GACGC	1 cut(s)	440
HhaI	GCGC	4 cut(s)	520, 612, 1452, 1552
Hin1I	GRCGYC	1 cut(s)	1550
Hin1II	CATG	8 cut(s)	289, 392, 509, 713, 724, 884, 896, 1344
Hin6I	GCGC	4 cut(s)	518, 610, 1450, 1550
HinP1I	GCGC	4 cut(s)	518, 610, 1450, 1550
HincII	GTYRAC	1 cut(s)	1245
HindII	GTYRAC	1 cut(s)	1245
HinfI	GANTC	5 cut(s)	101, 271, 646, 724, 1495
HpaII	CCGG	6 cut(s)	141, 146, 198, 1151, 1248, 1579
HphI	GGTGA	4 cut(s)	130, 881, 1052, 1535
Hpy166II	GTNNAC	7 cut(s)	78, 205, 568, 983, 1178, 1245, 1607
Hpy188III	TCNNGA	6 cut(s)	124, 198, 275, 881, 1438, 1579
Hpy8I	GTNNAC	7 cut(s)	78, 205, 568, 983, 1178, 1245, 1607
HpyAV	CCTTC	6 cut(s)	241, 322, 1306, 1313, 1563, 1644
HpyCH4III	ACNGT	5 cut(s)	69, 414, 572, 1037, 1242
HpyCH4IV	ACGT	2 cut(s)	970, 1180
HpyCH4V	TGCA	9 cut(s)	285, 602, 704, 770, 815, 914, 965, 1074, 1352
HpyF10VI	GCNNNNNNNGC	3 cut(s)	56, 287, 1510
HpyF3I	CTNAG	7 cut(s)	354, 553, 986, 1191, 1202, 1326, 1601
HpySE526I	ACGT	2 cut(s)	970, 1180
Hsp92I	GRCGYC	1 cut(s)	1550
Hsp92II	CATG	8 cut(s)	289, 392, 509, 713, 724, 884, 896, 1344
HspAI	GCGC	4 cut(s)	518, 610, 1450, 1550
KasI	GGCGCC	1 cut(s)	1549
Kpn2I	TCCGGA	2 cut(s)	197, 1578
Kzo9I	GATC	5 cut(s)	189, 343, 524, 1216, 1572
LmnI	GCTCC	6 cut(s)	126, 184, 241, 904, 1064, 1394
LweI	GCATC	6 cut(s)	268, 454, 547, 823, 923, 1241
MabI	ACCWGGT	1 cut(s)	947
MaeI	CTAG	3 cut(s)	579, 1005, 1061
MaeII	ACGT	2 cut(s)	970, 1180
MaeIII	GTNAC	4 cut(s)	430, 897, 1154, 1297
MalI	GATC	5 cut(s)	191, 345, 526, 1218, 1574
MbiI	CCGCTC	1 cut(s)	92
MboI	GATC	5 cut(s)	189, 343, 524, 1216, 1572
MboII	GAAGA	7 cut(s)	370, 641, 794, 864, 1135, 1264, 1567
MfeI	CAATTG	1 cut(s)	694
MflI	RGATCY	3 cut(s)	343, 1216, 1572
MhlI	GDGCHC	3 cut(s)	123, 223, 1052
Mly113I	GGCGCC	1 cut(s)	1550
MlyI	GAGTC	3 cut(s)	640, 733, 1504
MmeI	TCCRAC	2 cut(s)	129, 707
MroI	TCCGGA	2 cut(s)	197, 1578
MseI	TTAA	2 cut(s)	537, 740
MslI	CAYNNNNRTG	1 cut(s)	387
MspA1I	CMGCKG	1 cut(s)	152
MspI	CCGG	6 cut(s)	141, 146, 198, 1151, 1248, 1579
MunI	CAATTG	1 cut(s)	694
MvaI	CCWGG	8 cut(s)	399, 522, 933, 949, 1392, 1470, 1475, 1611
MvnI	CGCG	1 cut(s)	850
MwoI	GCNNNNNNNGC	3 cut(s)	56, 287, 1510
NarI	GGCGCC	1 cut(s)	1550
NciI	CCSGG	2 cut(s)	1152, 1249
NdeI	CATATG	1 cut(s)	1540
NdeII	GATC	5 cut(s)	189, 343, 524, 1216, 1572
NlaIII	CATG	8 cut(s)	289, 392, 509, 713, 724, 884, 896, 1344
NlaIV	GGNNCC	4 cut(s)	243, 678, 1378, 1551
NmeAIII	GCCGAG	1 cut(s)	1169
NsbI	TGCGCA	1 cut(s)	1451
NspI	RCATGY	1 cut(s)	1344
PagI	TCATGA	1 cut(s)	880
PasI	CCCWGGG	1 cut(s)	398
PciI	ACATGT	1 cut(s)	1340
PfeI	GAWTC	2 cut(s)	101, 271
PleI	GAGTC	3 cut(s)	640, 732, 1503
PluTI	GGCGCC	1 cut(s)	1553
PpsI	GAGTC	3 cut(s)	640, 732, 1503
Ppu21I	YACGTR	1 cut(s)	1181
PpuMI	RGGWCCY	1 cut(s)	951
PscI	ACATGT	1 cut(s)	1340
PshBI	ATTAAT	2 cut(s)	537, 740
Psp124BI	GAGCTC	1 cut(s)	223
Psp5II	RGGWCCY	1 cut(s)	951
Psp6I	CCWGG	8 cut(s)	397, 520, 931, 947, 1390, 1468, 1473, 1609
PspEI	GGTNACC	1 cut(s)	1154
PspFI	CCCAGC	1 cut(s)	1287
PspGI	CCWGG	8 cut(s)	397, 520, 931, 947, 1390, 1468, 1473, 1609
PspN4I	GGNNCC	4 cut(s)	243, 678, 1378, 1551
PspPI	GGNCC	6 cut(s)	143, 395, 677, 951, 1148, 1388
PspPPI	RGGWCCY	1 cut(s)	951
PstI	CTGCAG	1 cut(s)	604
PstNI	CAGNNNCTG	2 cut(s)	1082, 1113
PsuI	RGATCY	3 cut(s)	343, 1216, 1572
RsaI	GTAC	5 cut(s)	79, 984, 1177, 1458, 1608
RsaNI	GTAC	5 cut(s)	78, 983, 1176, 1457, 1607
RseI	CAYNNNNRTG	1 cut(s)	387
Rsr2I	CGGWCCG	1 cut(s)	143
RsrII	CGGWCCG	1 cut(s)	143
SacI	GAGCTC	1 cut(s)	223
SaqAI	TTAA	2 cut(s)	537, 740
Sau3AI	GATC	5 cut(s)	189, 343, 524, 1216, 1572
Sau96I	GGNCC	6 cut(s)	143, 395, 677, 951, 1148, 1388
SchI	GAGTC	3 cut(s)	640, 733, 1504
SduI	GDGCHC	3 cut(s)	123, 223, 1052
SexAI	ACCWGGT	1 cut(s)	947
SfaNI	GCATC	6 cut(s)	268, 454, 547, 823, 923, 1241
SfcI	CTRYAG	2 cut(s)	410, 600
SfoI	GGCGCC	1 cut(s)	1551
SinI	GGWCC	5 cut(s)	143, 677, 951, 1148, 1388
SmiMI	CAYNNNNRTG	1 cut(s)	387
SmlI	CTYRAG	1 cut(s)	955
SmoI	CTYRAG	1 cut(s)	955
SsiI	CCGC	4 cut(s)	92, 150, 239, 848
SspDI	GGCGCC	1 cut(s)	1549
SspMI	CTAG	3 cut(s)	579, 1005, 1061
SstI	GAGCTC	1 cut(s)	223
TaaI	ACNGT	5 cut(s)	69, 414, 572, 1037, 1242
TaiI	ACGT	2 cut(s)	973, 1183
TaqI	TCGA	2 cut(s)	633, 663
TatI	WGTACW	4 cut(s)	77, 982, 1175, 1456
TauI	GCSGC	1 cut(s)	152
TfiI	GAWTC	2 cut(s)	101, 271
Tru1I	TTAA	2 cut(s)	537, 740
Tru9I	TTAA	2 cut(s)	537, 740
TscAI	CASTG	4 cut(s)	358, 687, 1387, 1609
TspDTI	ATGAA	4 cut(s)	220, 522, 1179, 1544
TspGWI	ACGGA	1 cut(s)	197
TspRI	CASTG	4 cut(s)	358, 687, 1387, 1609
VpaK11BI	GGWCC	5 cut(s)	143, 677, 951, 1148, 1388
VspI	ATTAAT	2 cut(s)	537, 740
XapI	RAATTY	3 cut(s)	21, 378, 1166
XceI	RCATGY	1 cut(s)	1344
XcmI	CCANNNNNNNNNTGG	1 cut(s)	395
XspI	CTAG	3 cut(s)	579, 1005, 1061

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.