Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0010845

Physical Location & Seq

Genomic Coordinates Forward (+)

73219258 .. 73223976

Gene Structure 4719 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G041610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGGAGTTTTTAGGTGTCGGAATTCGGAAAAGCTATGGAGGTTTGTGGGCTAAATTGGCAATTTTACTGGTTCTGTGTACTATTGAACGAGCGGTGTGCGATTCCGACTATTTGATTGGGCTCGGGAGCTATGACATCACCGGACCGGCGGCTGATGTCAATATGATGGGGTATGCTAACACGGAGCAGATCGCTTCCGGAGTTCACTTCAGGCTGCGAGCTCGCTCGTTCATTGTGGCGGAGCCGAAGGGCAACCGAGTGGTGTTTGTGAATCTTGATGCTTGCATGGCCTCGCAGCTTGTGAAATTGAAAGTGATTGAGAGGTTGAAGGCAAGGTATGGGGATCTATACACTGAGAAGAATGTAGCTATTAGTGGAATTCACACCCATGCTGGCCCTGGGGGTTATCTACAGTATATTGTGTATATTGTAACATCTCTCGGGTTTGTGCGTCAGTCATTTGATGCCCTTGTTGATGGCATTGAGCAAAGCGTTATTCAAGCCCATGAAAATCTTGCGCCAGGATCAGTTTTTATTAGTAAAGGAGAAATTTTAGATGCTGGAGTAAACCGTAGTCCTAGTGCTTATCTCAATAATCCTGCAGCAGAGCGCAGTAAATACAAATATGATGTCGATAAAGAAATGACTCTTCTGAAGTTTGTCGATAATCAATGGGGTCCAGTGGGTAGCTTCAATTGGTTTGCAACTCATGGAACTTCTATGAGTCGGACAAACTCATTAATTAGTGGGGATAACAAGGGTGCTGCTGCACGATTTATGGAAGACTGGTTTGAGGAGAATGGTGGTAGAAGTGCATATTCTGATGATATTGATGCTGCCGATATACCGCGAAGAGTGTCAAACATAGTTTCTGACCATCATGATAATCACCATGAGTTACTGGAGCTTGCTGCATCCTTTCAGTCTCCTCCTGGTAAGCCAGCAACCAGGTCCTTGAGTGTTGCAAGACGTGTCAGGGGTGTACTAAGGCAGGCTAACAAGCCTAGATTTGTTTCTGCCTTTTGTCAATCAAACTGTGGTGATGTGAGCCCAAATGTTCTAGGAGCTTTCTGCACAGATACTGGGCTACCTTGTGATTTCAATCACAGCACCTGTGGTGGGAAGAATGAGTTGTGCTATGGCCGAGGACCGGGTTACCCAGATGAATTTGAAAGTACACGTATTATTGCTGAGAGGCAACTGAGAAAAGCTGTGGATCTTTTCAACAAAGCATCTGAACAGTTGACCGGGAAGATTGAATATCGCCACACTTACCTCAACTTCTCCCAGCTTGAAGTAACCCTTCCCAAGAAGGGGGGAGGTTCTGAGGTGGTAAAGACATGTCCTGCTGCAATGGGATTTGGATTTGCTGCTGGAACCACTGATGGACCTGGAGCTTTTGATTTCAAGCAAGGGGATGATAAGGGAAATCCTTTCTGGAGATTAGTGCGCAATGTACTCAAAACACCAGGCCAGGAACAAATTGATTGTCAGAGTCCAAAGCCAATCTTGCTTGATACTGGTGAAATGAAGCAACCATATGACTGGGCGCCTTCAATACTTCCAATTCAGATCTTCCGGATAGGGCAGCTTGTCATTCTCAGTGTACCTGGAGAATTTACAACAATGGCTGGTAGGCGGCTCCGTGATGCTGTGAAAACCGTACTGACTAGTGGTGGTCATGGTGGAAATATTCACGTTGTGCTAGCAGGATTGACTAATACTTATTCTCAGTACATTACGACCTTTGAAGAGTACGAAGTGCAGAGATATGAGGGTGCATCCACTCTCTATGGACCACACACGCTAAGTGCCTACATTCAGGAGTTCAAGAAGCTTGCTACAGCTCTCATCAGTAACCAACCTGTCGCATCAGGTCCACAACCCCCAGATCTCCTTGATAAGCAGATAAGCTTGCTTACTCCAGTTGTTATGGATGGAACCCCTGTTGGTGTCAGTTTTGGGGATTGCAGTTCGGATGTGCCTCAAAACTCCACCTTTAAGAGAGGTCATGACATGGTAACAGTTACCTTCTGGTCGGCTTGTCCTCGGAATGACCTATTGACGGAAGGTACATTTGCCCTTGTGGAGATTCTCCATGGAAAGGATACTTGGGTTCCAGCTTACGATGACGATGATTTCTGTCTGCGCTTTAAGTGGTCAAGACCTTCCAAACTCAGTACTAGAAGTCAGGCCACCATGGAATGGAGAATTCCTCAGTCCGCAACTCCCGGCGTATACAGAATTAGGCATTTTGGTGCCTCCAAGAGCCTGGTTGGATCGATTCGCCACTTTACGGGTTCATCTAGTGCTTTTGTGGTAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005794 GO:0006950 GO:0006979 GO:0008150 GO:0009987 GO:0012505 GO:0016020 GO:0019725 GO:0031090 GO:0033554 GO:0034599 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050896 GO:0051716 GO:0055082 GO:0055088 GO:0065007 GO:0065008 GO:0070887 GO:0090156 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko00600 ko01100 ko04071 map00600 map01100 map04071

Pfam Domains

Protein Families

Ceramidase_alk Ceramidse_alk_C

Protein Analysis

775

Amino Acids

84.94

Weight (kDa)

7.0

Isoelectric Point (pI)

39.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ceramidase_alk	PF04734	37 - 608	7e-229	Neutral/alkaline non-lysosomal ceramidase, N-terminal
Ceramidse_alk_C	PF17048	610 - 774	2.1e-54	Neutral/alkaline non-lysosomal ceramidase, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0010845)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07380 AT1G07380 AT5G58980
fragaria_vesca	FvH4_3g37680
malus_domestica	MD03G1079000.v1.1
prunus_persica	Prupe.6G063600_v2.0.a1
pyrus_communis	pycom03g06300
rosa_chinensis	RchiOBHm_Chr5g0067951
rosa_laevigata	RLG00000035946
rosa_multiflora	Rmu_sc0000435.1_g000039
rosa_roxburghii	Rroxscaffold_1G00012650 Rroxscaffold_1G00013360
rosa_rugosa	Rorug05G0386600 Rorug05G0386700
rosa_samantha	Rh5AG445600 Rh5BG463100 Rh5CG485000 Rh5DG477100
rosa_wichuraiana	Rw0G015370 Rw5G041610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1451
AccB1I	GGYRCC	2 cut(s)	1549, 2258
AccB7I	CCANNNNNTGG	1 cut(s)	2205
AccBSI	CCGCTC	1 cut(s)	92
AccI	GTMKAC	1 cut(s)	2238
AccII	CGCG	1 cut(s)	850
AccIII	TCCGGA	2 cut(s)	197, 1578
AciI	CCGC	6 cut(s)	92, 149, 239, 848, 1639, 2223
AclWI	GGATC	4 cut(s)	351, 532, 1224, 2287
AcoI	YGGCCR	1 cut(s)	1141
AcsI	RAATTY	6 cut(s)	21, 378, 549, 1166, 1616, 2211
AcuI	CTGAAG	2 cut(s)	193, 674
AcyI	GRCGYC	1 cut(s)	1550
AdeI	CACNNNGTG	1 cut(s)	1702
AfiI	CCNNNNNNNGG	8 cut(s)	1119, 1150, 1313, 1314, 2065, 2104, 2205, 2296
AflIII	ACRYGT	3 cut(s)	970, 1178, 1340
AhlI	ACTAGT	1 cut(s)	1670
AjiI	CACGTC	1 cut(s)	971
AjnI	CCWGG	9 cut(s)	397, 520, 931, 947, 1390, 1468, 1473, 1609, 2271
AjuI	GAANNNNNNNTTGG	2 cut(s)	2095, 2127
Alw21I	GWGCWC	1 cut(s)	223
Alw26I	GTCTC	1 cut(s)	930
AlwI	GGATC	4 cut(s)	351, 532, 1224, 2287
AlwNI	CAGNNNCTG	2 cut(s)	1082, 1113
Ama87I	CYCGRG	2 cut(s)	122, 440
Aor13HI	TCCGGA	2 cut(s)	197, 1578
AoxI	GGCC	5 cut(s)	288, 394, 1141, 1471, 2193
ApoI	RAATTY	6 cut(s)	21, 378, 549, 1166, 1616, 2211
ArsI	GACNNNNNNTTYG	4 cut(s)	615, 647, 1474, 1506
AseI	ATTAAT	1 cut(s)	740
AspLEI	GCGC	5 cut(s)	520, 612, 1452, 1552, 2151
AspS9I	GGNCC	8 cut(s)	143, 395, 677, 951, 1148, 1388, 1796, 1877
AsuC2I	CCSGG	3 cut(s)	1152, 1249, 2232
AsuHPI	GGTGA	4 cut(s)	130, 881, 1052, 1535
AsuNHI	GCTAGC	1 cut(s)	1705
AvaI	CYCGRG	2 cut(s)	122, 440
AvaII	GGWCC	7 cut(s)	143, 677, 951, 1148, 1388, 1796, 1877
BaeI	ACNNNNGTAYC	2 cut(s)	2100, 2133
BanI	GGYRCC	2 cut(s)	1549, 2258
BanII	GRGCYC	3 cut(s)	123, 223, 1052
BbsI	GAAGAC	1 cut(s)	789
Bbv12I	GWGCWC	1 cut(s)	223
BccI	CCATC	5 cut(s)	160, 470, 885, 1379, 1931
BcgI	CGANNNNNNTGC	2 cut(s)	78, 112
BciT130I	CCWGG	9 cut(s)	399, 522, 933, 949, 1392, 1470, 1475, 1611, 2273
BciVI	GTATCC	1 cut(s)	2101
BcnI	CCSGG	3 cut(s)	1152, 1249, 2232
BcoDI	GTCTC	1 cut(s)	930
BcuI	ACTAGT	1 cut(s)	1670
BfaI	CTAG	7 cut(s)	579, 1005, 1061, 1671, 1706, 2184, 2307
BfmI	CTRYAG	3 cut(s)	410, 600, 1842
BfoI	RGCGCY	1 cut(s)	1553
BfuI	GTATCC	1 cut(s)	2101
BglII	AGATCT	2 cut(s)	1572, 1891
BmcAI	AGTACT	1 cut(s)	2182
Bme18I	GGWCC	7 cut(s)	143, 677, 951, 1148, 1388, 1796, 1877
BmeT110I	CYCGRG	2 cut(s)	122, 440
BmgBI	CACGTC	1 cut(s)	971
BmgT120I	GGNCC	8 cut(s)	143, 395, 677, 951, 1148, 1388, 1796, 1877
BmiI	GGNNCC	8 cut(s)	243, 678, 1378, 1551, 1643, 1942, 2118, 2260
BmrI	ACTGGG	2 cut(s)	1092, 1555
BmsI	GCATC	9 cut(s)	268, 454, 547, 823, 923, 1241, 1639, 1790, 1880
BmtI	GCTAGC	1 cut(s)	1709
BmuI	ACTGGG	2 cut(s)	1092, 1555
BpiI	GAAGAC	1 cut(s)	789
BplI	GAGNNNNNCTC	2 cut(s)	2200, 2232
BpmI	CTGGAG	6 cut(s)	582, 923, 1413, 1459, 1632, 1908
BpuEI	CTTGAG	1 cut(s)	976
BpuMI	CCSGG	3 cut(s)	1152, 1249, 2232
Bsa29I	ATCGAT	1 cut(s)	2282
BsaAI	YACGTR	1 cut(s)	1181
BsaBI	GATNNNNATC	1 cut(s)	1101
BsaHI	GRCGYC	1 cut(s)	1550
BsaJI	CCNNGG	6 cut(s)	397, 398, 1144, 2048, 2098, 2199
BsaWI	WCCGGW	3 cut(s)	140, 197, 1578
Bsc4I	CCNNNNNNNGG	8 cut(s)	1119, 1150, 1313, 1314, 2065, 2104, 2205, 2296
Bse118I	RCCGGY	1 cut(s)	145
Bse1I	ACTGG	8 cut(s)	72, 680, 791, 906, 1087, 1525, 1550, 1925
Bse3DI	GCAATG	2 cut(s)	1359, 1459
Bse8I	GATNNNNATC	1 cut(s)	1101
BseAI	TCCGGA	2 cut(s)	197, 1578
BseBI	CCWGG	9 cut(s)	399, 522, 933, 949, 1392, 1470, 1475, 1611, 2273
BseCI	ATCGAT	1 cut(s)	2282
BseDI	CCNNGG	6 cut(s)	397, 398, 1144, 2048, 2098, 2199
BseGI	GGATG	5 cut(s)	914, 1423, 1781, 1942, 1984
BseJI	GATNNNNATC	1 cut(s)	1101
BseLI	CCNNNNNNNGG	8 cut(s)	1119, 1150, 1313, 1314, 2065, 2104, 2205, 2296
BseMI	GCAATG	2 cut(s)	1359, 1459
BseMII	CTCAG	8 cut(s)	345, 1182, 1193, 1317, 1615, 1745, 2191, 2231
BseNI	ACTGG	8 cut(s)	72, 680, 791, 906, 1087, 1525, 1550, 1925
BseRI	GAGGAG	2 cut(s)	809, 918
BseYI	CCCAGC	1 cut(s)	1287
BsgI	GTGCAG	3 cut(s)	753, 1057, 1784
Bsh1236I	CGCG	1 cut(s)	850
BshFI	GGCC	5 cut(s)	290, 396, 1143, 1473, 2195
BshNI	GGYRCC	2 cut(s)	1549, 2258
BshVI	ATCGAT	1 cut(s)	2282
BsiHKAI	GWGCWC	1 cut(s)	223
BsiHKCI	CYCGRG	2 cut(s)	122, 440
BsiSI	CCGG	7 cut(s)	141, 146, 198, 1151, 1248, 1579, 2232
BslI	CCNNNNNNNGG	8 cut(s)	1119, 1150, 1313, 1314, 2065, 2104, 2205, 2296
BsmAI	GTCTC	1 cut(s)	930
BsnI	GGCC	5 cut(s)	290, 396, 1143, 1473, 2195
BsoBI	CYCGRG	2 cut(s)	122, 440
Bsp1286I	GDGCHC	3 cut(s)	123, 223, 1052
Bsp13I	TCCGGA	2 cut(s)	197, 1578
Bsp143I	GATC	7 cut(s)	189, 343, 524, 1216, 1572, 1891, 2279
Bsp19I	CCATGG	2 cut(s)	2098, 2199
BspACI	CCGC	6 cut(s)	92, 149, 239, 848, 1639, 2223
BspANI	GGCC	5 cut(s)	290, 396, 1143, 1473, 2195
BspCNI	CTCAG	8 cut(s)	346, 1183, 1194, 1318, 1614, 1744, 2190, 2230
BspDI	ATCGAT	1 cut(s)	2282
BspEI	TCCGGA	2 cut(s)	197, 1578
BspFNI	CGCG	1 cut(s)	850
BspHI	TCATGA	2 cut(s)	880, 2011
BspLI	GGNNCC	8 cut(s)	243, 678, 1378, 1551, 1643, 1942, 2118, 2260
BspMAI	CTGCAG	1 cut(s)	604
BspOI	GCTAGC	1 cut(s)	1709
BspPI	GGATC	4 cut(s)	351, 532, 1224, 2287
BspT107I	GGYRCC	2 cut(s)	1549, 2258
BsrBI	CCGCTC	1 cut(s)	92
BsrDI	GCAATG	2 cut(s)	1359, 1459
BsrFI	RCCGGY	1 cut(s)	145
BsrI	ACTGG	8 cut(s)	72, 680, 791, 906, 1087, 1525, 1550, 1925
BssAI	RCCGGY	1 cut(s)	145
BssECI	CCNNGG	6 cut(s)	397, 398, 1144, 2048, 2098, 2199
BssMI	GATC	7 cut(s)	189, 343, 524, 1216, 1572, 1891, 2279
BssNAI	GTATAC	1 cut(s)	2239
BssNI	GRCGYC	1 cut(s)	1550
BssT1I	CCWWGG	2 cut(s)	2098, 2199
Bst1107I	GTATAC	1 cut(s)	2239
Bst2UI	CCWGG	9 cut(s)	399, 522, 933, 949, 1392, 1470, 1475, 1611, 2273
Bst4CI	ACNGT	6 cut(s)	414, 572, 1037, 1242, 1663, 2026
Bst6I	CTCTTC	3 cut(s)	654, 847, 1746
BstACI	GRCGYC	1 cut(s)	1550
BstBAI	YACGTR	1 cut(s)	1181
BstDSI	CCRYGG	2 cut(s)	2098, 2199
BstEII	GGTNACC	1 cut(s)	1154
BstF5I	GGATG	5 cut(s)	914, 1423, 1781, 1942, 1984
BstFNI	CGCG	1 cut(s)	850
BstH2I	RGCGCY	1 cut(s)	1553
BstHHI	GCGC	5 cut(s)	520, 612, 1452, 1552, 2151
BstKTI	GATC	7 cut(s)	192, 346, 527, 1219, 1575, 1894, 2282
BstMAI	GTCTC	1 cut(s)	930
BstMBI	GATC	7 cut(s)	189, 343, 524, 1216, 1572, 1891, 2279
BstMWI	GCNNNNNNNGC	3 cut(s)	56, 287, 1510
BstNI	CCWGG	9 cut(s)	399, 522, 933, 949, 1392, 1470, 1475, 1611, 2273
BstNSI	RCATGY	1 cut(s)	1344
BstPI	GGTNACC	1 cut(s)	1154
BstSFI	CTRYAG	3 cut(s)	410, 600, 1842
BstUI	CGCG	1 cut(s)	850
BstV2I	GAAGAC	1 cut(s)	789
BstX2I	RGATCY	4 cut(s)	343, 1216, 1572, 1891
BstXI	CCANNNNNNTGG	2 cut(s)	1545, 2272
BstYI	RGATCY	4 cut(s)	343, 1216, 1572, 1891
BstZ17I	GTATAC	1 cut(s)	2239
Bsu15I	ATCGAT	1 cut(s)	2282
BsuI	GTATCC	1 cut(s)	2101
BsuRI	GGCC	5 cut(s)	290, 396, 1143, 1473, 2195
BsuTUI	ATCGAT	1 cut(s)	2282
BtgI	CCRYGG	2 cut(s)	2098, 2199
BtrI	CACGTC	1 cut(s)	971
BtsCI	GGATG	5 cut(s)	914, 1423, 1781, 1942, 1984
BtsIMutI	CAGTG	4 cut(s)	351, 687, 1380, 1609
CaiI	CAGNNNCTG	2 cut(s)	1082, 1113
CciI	TCATGA	2 cut(s)	880, 2011
CfoI	GCGC	5 cut(s)	520, 612, 1452, 1552, 2151
Cfr10I	RCCGGY	1 cut(s)	145
Cfr13I	GGNCC	8 cut(s)	143, 395, 677, 951, 1148, 1388, 1796, 1877
ClaI	ATCGAT	1 cut(s)	2282
CpoI	CGGWCCG	1 cut(s)	143
CseI	GACGC	1 cut(s)	440
CsiI	ACCWGGT	1 cut(s)	947
CspI	CGGWCCG	1 cut(s)	143
DinI	GGCGCC	1 cut(s)	1551
DpnI	GATC	7 cut(s)	191, 345, 526, 1218, 1574, 1893, 2281
DpnII	GATC	7 cut(s)	189, 343, 524, 1216, 1572, 1891, 2279
DraIII	CACNNNGTG	1 cut(s)	1702
EaeI	YGGCCR	1 cut(s)	1141
Eam1104I	CTCTTC	3 cut(s)	654, 847, 1746
EarI	CTCTTC	3 cut(s)	654, 847, 1746
EciI	GGCGGA	1 cut(s)	254
Ecl136II	GAGCTC	1 cut(s)	221
Eco130I	CCWWGG	2 cut(s)	2098, 2199
Eco24I	GRGCYC	3 cut(s)	123, 223, 1052
Eco47I	GGWCC	7 cut(s)	143, 677, 951, 1148, 1388, 1796, 1877
Eco53kI	GAGCTC	1 cut(s)	221
Eco57I	CTGAAG	2 cut(s)	193, 674
Eco88I	CYCGRG	2 cut(s)	122, 440
Eco91I	GGTNACC	1 cut(s)	1154
EcoICRI	GAGCTC	1 cut(s)	221
EcoO109I	RGGNCCY	1 cut(s)	951
EcoO65I	GGTNACC	1 cut(s)	1154
EcoRI	GAATTC	3 cut(s)	21, 378, 2211
EcoRII	CCWGG	9 cut(s)	397, 520, 931, 947, 1390, 1468, 1473, 1609, 2271
EcoT14I	CCWWGG	2 cut(s)	2098, 2199
EcoT38I	GRGCYC	3 cut(s)	123, 223, 1052
EgeI	GGCGCC	1 cut(s)	1551
EheI	GGCGCC	1 cut(s)	1551
ErhI	CCWWGG	2 cut(s)	2098, 2199
FalI	AAGNNNNNCTT	4 cut(s)	1287, 1319, 1493, 1525
FauNDI	CATATG	1 cut(s)	1540
FblI	GTMKAC	1 cut(s)	2238
FokI	GGATG	5 cut(s)	901, 1430, 1768, 1949, 1991
FriOI	GRGCYC	3 cut(s)	123, 223, 1052
FspBI	CTAG	7 cut(s)	579, 1005, 1061, 1671, 1706, 2184, 2307
FspI	TGCGCA	1 cut(s)	1451
GlaI	GCGC	5 cut(s)	519, 611, 1451, 1551, 2150
GsaI	CCCAGC	1 cut(s)	1291
GsuI	CTGGAG	6 cut(s)	582, 923, 1413, 1459, 1632, 1908
HaeII	RGCGCY	1 cut(s)	1553
HaeIII	GGCC	5 cut(s)	290, 396, 1143, 1473, 2195
HapII	CCGG	7 cut(s)	141, 146, 198, 1151, 1248, 1579, 2232
HgaI	GACGC	1 cut(s)	440
HhaI	GCGC	5 cut(s)	520, 612, 1452, 1552, 2151
Hin1I	GRCGYC	1 cut(s)	1550
Hin6I	GCGC	5 cut(s)	518, 610, 1450, 1550, 2149
HinP1I	GCGC	5 cut(s)	518, 610, 1450, 1550, 2149
HincII	GTYRAC	1 cut(s)	1245
HindII	GTYRAC	1 cut(s)	1245
HindIII	AAGCTT	2 cut(s)	1835, 1912
HinfI	GANTC	7 cut(s)	101, 271, 646, 724, 1495, 2092, 2284
HpaII	CCGG	7 cut(s)	141, 146, 198, 1151, 1248, 1579, 2232
HphI	GGTGA	4 cut(s)	130, 881, 1052, 1535
Hpy166II	GTNNAC	9 cut(s)	78, 205, 568, 983, 1178, 1245, 1607, 1880, 2239
Hpy8I	GTNNAC	9 cut(s)	78, 205, 568, 983, 1178, 1245, 1607, 1880, 2239
HpyAV	CCTTC	8 cut(s)	241, 322, 1306, 1313, 1563, 2041, 2063, 2178
HpyCH4III	ACNGT	6 cut(s)	414, 572, 1037, 1242, 1663, 2026
HpyCH4IV	ACGT	3 cut(s)	970, 1180, 1698
HpyF10VI	GCNNNNNNNGC	3 cut(s)	56, 287, 1510
HpySE526I	ACGT	3 cut(s)	970, 1180, 1698
Hsp92I	GRCGYC	1 cut(s)	1550
HspAI	GCGC	5 cut(s)	518, 610, 1450, 1550, 2149
KasI	GGCGCC	1 cut(s)	1549
Kpn2I	TCCGGA	2 cut(s)	197, 1578
Kzo9I	GATC	7 cut(s)	189, 343, 524, 1216, 1572, 1891, 2279
LmnI	GCTCC	7 cut(s)	126, 184, 241, 904, 1064, 1394, 1647
LweI	GCATC	9 cut(s)	268, 454, 547, 823, 923, 1241, 1639, 1790, 1880
MabI	ACCWGGT	1 cut(s)	947
MaeI	CTAG	7 cut(s)	579, 1005, 1061, 1671, 1706, 2184, 2307
MaeII	ACGT	3 cut(s)	970, 1180, 1698
MaeIII	GTNAC	7 cut(s)	430, 897, 1154, 1297, 1856, 2020, 2026
MalI	GATC	7 cut(s)	191, 345, 526, 1218, 1574, 1893, 2281
MbiI	CCGCTC	1 cut(s)	92
MboI	GATC	7 cut(s)	189, 343, 524, 1216, 1572, 1891, 2279
MboII	GAAGA	8 cut(s)	370, 641, 794, 864, 1135, 1264, 1567, 1763
MfeI	CAATTG	1 cut(s)	694
MflI	RGATCY	4 cut(s)	343, 1216, 1572, 1891
MhlI	GDGCHC	3 cut(s)	123, 223, 1052
Mly113I	GGCGCC	1 cut(s)	1550
MlyI	GAGTC	3 cut(s)	640, 733, 1504
MmeI	TCCRAC	3 cut(s)	129, 707, 2257
MroI	TCCGGA	2 cut(s)	197, 1578
MseI	TTAA	3 cut(s)	740, 2001, 2154
MslI	CAYNNNNRTG	2 cut(s)	387, 2256
MspI	CCGG	7 cut(s)	141, 146, 198, 1151, 1248, 1579, 2232
MunI	CAATTG	1 cut(s)	694
MvaI	CCWGG	9 cut(s)	399, 522, 933, 949, 1392, 1470, 1475, 1611, 2273
MvnI	CGCG	1 cut(s)	850
MwoI	GCNNNNNNNGC	3 cut(s)	56, 287, 1510
NarI	GGCGCC	1 cut(s)	1550
NciI	CCSGG	3 cut(s)	1152, 1249, 2232
NcoI	CCATGG	2 cut(s)	2098, 2199
NdeI	CATATG	1 cut(s)	1540
NdeII	GATC	7 cut(s)	189, 343, 524, 1216, 1572, 1891, 2279
NheI	GCTAGC	1 cut(s)	1705
NlaIV	GGNNCC	8 cut(s)	243, 678, 1378, 1551, 1643, 1942, 2118, 2260
NmeAIII	GCCGAG	1 cut(s)	1169
NsbI	TGCGCA	1 cut(s)	1451
NspI	RCATGY	1 cut(s)	1344
PagI	TCATGA	2 cut(s)	880, 2011
PasI	CCCWGGG	1 cut(s)	398
PciI	ACATGT	1 cut(s)	1340
PfeI	GAWTC	4 cut(s)	101, 271, 2092, 2284
PflMI	CCANNNNNTGG	1 cut(s)	2205
PleI	GAGTC	3 cut(s)	640, 732, 1503
PluTI	GGCGCC	1 cut(s)	1553
PpsI	GAGTC	3 cut(s)	640, 732, 1503
Ppu21I	YACGTR	1 cut(s)	1181
PpuMI	RGGWCCY	1 cut(s)	951
PscI	ACATGT	1 cut(s)	1340
PshBI	ATTAAT	1 cut(s)	740
Psp124BI	GAGCTC	1 cut(s)	223
Psp5II	RGGWCCY	1 cut(s)	951
Psp6I	CCWGG	9 cut(s)	397, 520, 931, 947, 1390, 1468, 1473, 1609, 2271
PspEI	GGTNACC	1 cut(s)	1154
PspFI	CCCAGC	1 cut(s)	1287
PspGI	CCWGG	9 cut(s)	397, 520, 931, 947, 1390, 1468, 1473, 1609, 2271
PspN4I	GGNNCC	8 cut(s)	243, 678, 1378, 1551, 1643, 1942, 2118, 2260
PspPI	GGNCC	8 cut(s)	143, 395, 677, 951, 1148, 1388, 1796, 1877
PspPPI	RGGWCCY	1 cut(s)	951
PstI	CTGCAG	1 cut(s)	604
PstNI	CAGNNNCTG	2 cut(s)	1082, 1113
PsuI	RGATCY	4 cut(s)	343, 1216, 1572, 1891
RseI	CAYNNNNRTG	2 cut(s)	387, 2256
Rsr2I	CGGWCCG	1 cut(s)	143
RsrII	CGGWCCG	1 cut(s)	143
SacI	GAGCTC	1 cut(s)	223
SaqAI	TTAA	3 cut(s)	740, 2001, 2154
Sau3AI	GATC	7 cut(s)	189, 343, 524, 1216, 1572, 1891, 2279
Sau96I	GGNCC	8 cut(s)	143, 395, 677, 951, 1148, 1388, 1796, 1877
ScaI	AGTACT	1 cut(s)	2182
SchI	GAGTC	3 cut(s)	640, 733, 1504
SduI	GDGCHC	3 cut(s)	123, 223, 1052
SexAI	ACCWGGT	1 cut(s)	947
SfaNI	GCATC	9 cut(s)	268, 454, 547, 823, 923, 1241, 1639, 1790, 1880
SfcI	CTRYAG	3 cut(s)	410, 600, 1842
SfoI	GGCGCC	1 cut(s)	1551
SinI	GGWCC	7 cut(s)	143, 677, 951, 1148, 1388, 1796, 1877
SmiMI	CAYNNNNRTG	2 cut(s)	387, 2256
SmlI	CTYRAG	1 cut(s)	955
SmoI	CTYRAG	1 cut(s)	955
SpeI	ACTAGT	1 cut(s)	1670
SsiI	CCGC	6 cut(s)	92, 149, 239, 848, 1639, 2223
SspDI	GGCGCC	1 cut(s)	1549
SspI	AATATT	1 cut(s)	1693
SspMI	CTAG	7 cut(s)	579, 1005, 1061, 1671, 1706, 2184, 2307
SstI	GAGCTC	1 cut(s)	223
StyI	CCWWGG	2 cut(s)	2098, 2199
TaaI	ACNGT	6 cut(s)	414, 572, 1037, 1242, 1663, 2026
TaiI	ACGT	3 cut(s)	973, 1183, 1701
TaqI	TCGA	3 cut(s)	633, 663, 2282
TatI	WGTACW	6 cut(s)	77, 982, 1175, 1456, 1734, 2180
TauI	GCSGC	2 cut(s)	152, 1642
TfiI	GAWTC	4 cut(s)	101, 271, 2092, 2284
Tru1I	TTAA	3 cut(s)	740, 2001, 2154
Tru9I	TTAA	3 cut(s)	740, 2001, 2154
TscAI	CASTG	4 cut(s)	358, 687, 1387, 1609
TspDTI	ATGAA	5 cut(s)	220, 522, 1179, 1544, 2292
TspGWI	ACGGA	3 cut(s)	197, 1634, 2081
TspRI	CASTG	4 cut(s)	358, 687, 1387, 1609
Van91I	CCANNNNNTGG	1 cut(s)	2205
VpaK11BI	GGWCC	7 cut(s)	143, 677, 951, 1148, 1388, 1796, 1877
VspI	ATTAAT	1 cut(s)	740
XapI	RAATTY	6 cut(s)	21, 378, 549, 1166, 1616, 2211
XceI	RCATGY	1 cut(s)	1344
XcmI	CCANNNNNNNNNTGG	1 cut(s)	395
XmiI	GTMKAC	1 cut(s)	2238
XspI	CTAG	7 cut(s)	579, 1005, 1061, 1671, 1706, 2184, 2307
ZrmI	AGTACT	1 cut(s)	2182

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.