ATPase family associated with various cellular activities (AAA)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0396721 RchiOBHm_Chr5g0040161 RchiOBHm_Chr6g0266481 |
| rosa_laevigata | RLG00000013317 RLG00000023273 |
| rosa_multiflora | Rmu_sc0002723.1_g000038 Rmu_sc0005394.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00223570 |
| rosa_rugosa | Rorug01G0150100.1 Rorug04G0116200 |
| rosa_samantha | Rh2CG294500 Rh3DG310500 Rh4AG240800 Rh4BG174500 Rh4BG174600 Rh4BG244000 Rh5DG228500 Rh6AG223000 Rh7AG214700 Rh7AG214800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 220 |
| AccB1I | GGYRCC | 1 cut(s) | 220 |
| AccI | GTMKAC | 1 cut(s) | 162 |
| AciI | CCGC | 1 cut(s) | 46 |
| AfaI | GTAC | 1 cut(s) | 222 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 45 |
| AgsI | TTSAA | 1 cut(s) | 80 |
| AluBI | AGCT | 5 cut(s) | 122, 148, 217, 277, 285 |
| AluI | AGCT | 5 cut(s) | 122, 148, 217, 277, 285 |
| Alw21I | GWGCWC | 1 cut(s) | 150 |
| AoxI | GGCC | 3 cut(s) | 47, 83, 200 |
| ApeKI | GCWGC | 1 cut(s) | 122 |
| Asp718I | GGTACC | 1 cut(s) | 220 |
| BanI | GGYRCC | 1 cut(s) | 220 |
| BanII | GRGCYC | 1 cut(s) | 150 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 60, 92 |
| Bbv12I | GWGCWC | 1 cut(s) | 150 |
| BbvI | GCAGC | 1 cut(s) | 109 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 244, 278 |
| BfaI | CTAG | 2 cut(s) | 12, 51 |
| BfmI | CTRYAG | 2 cut(s) | 204, 286 |
| BisI | GCNGC | 2 cut(s) | 47, 123 |
| BlsI | GCNGC | 2 cut(s) | 48, 124 |
| BmiI | GGNNCC | 1 cut(s) | 222 |
| BmsI | GCATC | 1 cut(s) | 25 |
| BpmI | CTGGAG | 1 cut(s) | 187 |
| BpuEI | CTTGAG | 3 cut(s) | 5, 75, 268 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 45 |
| Bse1I | ACTGG | 1 cut(s) | 170 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 45 |
| BseNI | ACTGG | 1 cut(s) | 170 |
| BseRI | GAGGAG | 1 cut(s) | 265 |
| BseXI | GCAGC | 1 cut(s) | 109 |
| BshFI | GGCC | 3 cut(s) | 49, 85, 202 |
| BshNI | GGYRCC | 1 cut(s) | 220 |
| BsiHKAI | GWGCWC | 1 cut(s) | 150 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 45 |
| BsnI | GGCC | 3 cut(s) | 49, 85, 202 |
| Bsp1286I | GDGCHC | 1 cut(s) | 150 |
| BspACI | CCGC | 1 cut(s) | 46 |
| BspANI | GGCC | 3 cut(s) | 49, 85, 202 |
| BspLI | GGNNCC | 1 cut(s) | 222 |
| BspT107I | GGYRCC | 1 cut(s) | 220 |
| BsrI | ACTGG | 1 cut(s) | 170 |
| Bst4CI | ACNGT | 1 cut(s) | 290 |
| BstNSI | RCATGY | 1 cut(s) | 61 |
| BstSFI | CTRYAG | 2 cut(s) | 204, 286 |
| BstV1I | GCAGC | 1 cut(s) | 109 |
| BsuRI | GGCC | 3 cut(s) | 49, 85, 202 |
| Csp6I | GTAC | 1 cut(s) | 221 |
| CviAII | CATG | 1 cut(s) | 58 |
| CviJI | RGCY | 9 cut(s) | 5, 49, 85, 122, 148, 202, 217, 277, 285 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 49, 85, 122, 148, 202, 217, 277, 285 |
| CviQI | GTAC | 1 cut(s) | 221 |
| Ecl136II | GAGCTC | 1 cut(s) | 148 |
| Eco147I | AGGCCT | 1 cut(s) | 202 |
| Eco24I | GRGCYC | 1 cut(s) | 150 |
| Eco53kI | GAGCTC | 1 cut(s) | 148 |
| EcoICRI | GAGCTC | 1 cut(s) | 148 |
| EcoT38I | GRGCYC | 1 cut(s) | 150 |
| FaeI | CATG | 1 cut(s) | 61 |
| FaiI | YATR | 5 cut(s) | 59, 63, 119, 206, 281 |
| FatI | CATG | 1 cut(s) | 57 |
| FblI | GTMKAC | 1 cut(s) | 162 |
| Fnu4HI | GCNGC | 2 cut(s) | 47, 123 |
| FriOI | GRGCYC | 1 cut(s) | 150 |
| Fsp4HI | GCNGC | 2 cut(s) | 47, 123 |
| FspBI | CTAG | 2 cut(s) | 12, 51 |
| GluI | GCNGC | 2 cut(s) | 47, 123 |
| GsuI | CTGGAG | 1 cut(s) | 187 |
| HaeIII | GGCC | 3 cut(s) | 49, 85, 202 |
| Hin1II | CATG | 1 cut(s) | 61 |
| Hpy166II | GTNNAC | 1 cut(s) | 163 |
| Hpy8I | GTNNAC | 1 cut(s) | 163 |
| HpyAV | CCTTC | 1 cut(s) | 230 |
| HpyCH4III | ACNGT | 1 cut(s) | 290 |
| HpyCH4V | TGCA | 1 cut(s) | 125 |
| Hsp92II | CATG | 1 cut(s) | 61 |
| KpnI | GGTACC | 1 cut(s) | 224 |
| LmnI | GCTCC | 1 cut(s) | 252 |
| LpnPI | CCDG | 3 cut(s) | 151, 203, 237 |
| Lsp1109I | GCAGC | 1 cut(s) | 109 |
| LweI | GCATC | 1 cut(s) | 25 |
| MaeI | CTAG | 2 cut(s) | 12, 51 |
| MboII | GAAGA | 2 cut(s) | 68, 118 |
| MhlI | GDGCHC | 1 cut(s) | 150 |
| MluCI | AATT | 2 cut(s) | 27, 209 |
| MmeI | TCCRAC | 1 cut(s) | 213 |
| MnlI | CCTC | 1 cut(s) | 243 |
| MseI | TTAA | 3 cut(s) | 41, 197, 212 |
| NlaIII | CATG | 1 cut(s) | 61 |
| NlaIV | GGNNCC | 1 cut(s) | 222 |
| NspI | RCATGY | 1 cut(s) | 61 |
| PceI | AGGCCT | 1 cut(s) | 202 |
| PkrI | GCNGC | 2 cut(s) | 48, 124 |
| Psp124BI | GAGCTC | 1 cut(s) | 150 |
| PspN4I | GGNNCC | 1 cut(s) | 222 |
| RsaI | GTAC | 1 cut(s) | 222 |
| RsaNI | GTAC | 1 cut(s) | 221 |
| SacI | GAGCTC | 1 cut(s) | 150 |
| SaqAI | TTAA | 3 cut(s) | 41, 197, 212 |
| SatI | GCNGC | 2 cut(s) | 47, 123 |
| SduI | GDGCHC | 1 cut(s) | 150 |
| SetI | ASST | 8 cut(s) | 124, 150, 177, 219, 226, 241, 279, 287 |
| SfaNI | GCATC | 1 cut(s) | 25 |
| SfcI | CTRYAG | 2 cut(s) | 204, 286 |
| SmlI | CTYRAG | 3 cut(s) | 20, 90, 247 |
| SmoI | CTYRAG | 3 cut(s) | 20, 90, 247 |
| Sse9I | AATT | 2 cut(s) | 27, 209 |
| SseBI | AGGCCT | 1 cut(s) | 202 |
| SsiI | CCGC | 1 cut(s) | 46 |
| SspMI | CTAG | 2 cut(s) | 12, 51 |
| SstI | GAGCTC | 1 cut(s) | 150 |
| StuI | AGGCCT | 1 cut(s) | 202 |
| TaaI | ACNGT | 1 cut(s) | 290 |
| TaqI | TCGA | 1 cut(s) | 264 |
| TasI | AATT | 2 cut(s) | 27, 209 |
| TauI | GCSGC | 1 cut(s) | 49 |
| Tru1I | TTAA | 3 cut(s) | 41, 197, 212 |
| Tru9I | TTAA | 3 cut(s) | 41, 197, 212 |
| TseI | GCWGC | 1 cut(s) | 122 |
| TspDTI | ATGAA | 1 cut(s) | 62 |
| XceI | RCATGY | 1 cut(s) | 61 |
| XmiI | GTMKAC | 1 cut(s) | 162 |
| XspI | CTAG | 2 cut(s) | 12, 51 |