No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0150381 |
| rosa_laevigata | RLG00000010921 RLG00000020494 |
| rosa_multiflora | Rmu_sc0000061.1_g000028 Rmu_sc0002179.1_g000010 Rmu_ssc0000480.1_g000007 |
| rosa_roxburghii | Rroxscaffold_7G00163170 |
| rosa_rugosa | Rorug02G0421100 Rorug06G0337100 |
| rosa_samantha | Rh2AG480200 Rh2BG492300 Rh2CG466500 Rh2DG501200 Rh6AG448900 |
| rosa_wichuraiana | Rw2G039190 Rw6G039100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 108 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 63 |
| AcsI | RAATTY | 1 cut(s) | 50 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 63 |
| AflIII | ACRYGT | 1 cut(s) | 60 |
| AluBI | AGCT | 2 cut(s) | 91, 158 |
| AluI | AGCT | 2 cut(s) | 91, 158 |
| Alw26I | GTCTC | 1 cut(s) | 61 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 17 |
| Ama87I | CYCGRG | 1 cut(s) | 45 |
| ApoI | RAATTY | 1 cut(s) | 50 |
| AvaI | CYCGRG | 1 cut(s) | 45 |
| BaeGI | GKGCMC | 1 cut(s) | 111 |
| BanI | GGYRCC | 1 cut(s) | 108 |
| BcoDI | GTCTC | 1 cut(s) | 61 |
| BmeT110I | CYCGRG | 1 cut(s) | 45 |
| BmiI | GGNNCC | 1 cut(s) | 110 |
| BmsI | GCATC | 2 cut(s) | 70, 144 |
| BsaI | GGTCTC | 1 cut(s) | 61 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 58, 88 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 63 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 63 |
| BseMII | CTCAG | 1 cut(s) | 24 |
| BseSI | GKGCMC | 1 cut(s) | 111 |
| BshNI | GGYRCC | 1 cut(s) | 108 |
| BsiHKCI | CYCGRG | 1 cut(s) | 45 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 63 |
| BsmAI | GTCTC | 1 cut(s) | 61 |
| Bso31I | GGTCTC | 1 cut(s) | 61 |
| BsoBI | CYCGRG | 1 cut(s) | 45 |
| Bsp1286I | GDGCHC | 1 cut(s) | 111 |
| BspCNI | CTCAG | 1 cut(s) | 23 |
| BspLI | GGNNCC | 1 cut(s) | 110 |
| BspQI | GCTCTTC | 2 cut(s) | 98, 165 |
| BspT107I | GGYRCC | 1 cut(s) | 108 |
| BspTNI | GGTCTC | 1 cut(s) | 61 |
| Bst6I | CTCTTC | 2 cut(s) | 98, 165 |
| BstDEI | CTNAG | 1 cut(s) | 10 |
| BstMAI | GTCTC | 1 cut(s) | 61 |
| BstNSI | RCATGY | 1 cut(s) | 64 |
| BstSLI | GKGCMC | 1 cut(s) | 111 |
| BtsIMutI | CAGTG | 1 cut(s) | 18 |
| CaiI | CAGNNNCTG | 1 cut(s) | 17 |
| CviAII | CATG | 2 cut(s) | 61, 97 |
| CviJI | RGCY | 2 cut(s) | 91, 158 |
| CviKI_1 | RGCY | 2 cut(s) | 91, 158 |
| DdeI | CTNAG | 1 cut(s) | 10 |
| Eam1104I | CTCTTC | 2 cut(s) | 98, 165 |
| EarI | CTCTTC | 2 cut(s) | 98, 165 |
| Eco31I | GGTCTC | 1 cut(s) | 61 |
| Eco88I | CYCGRG | 1 cut(s) | 45 |
| EcoRI | GAATTC | 1 cut(s) | 50 |
| FaeI | CATG | 2 cut(s) | 64, 100 |
| FaiI | YATR | 2 cut(s) | 62, 98 |
| FatI | CATG | 2 cut(s) | 60, 96 |
| Hin1II | CATG | 2 cut(s) | 64, 100 |
| HpyAV | CCTTC | 2 cut(s) | 98, 168 |
| HpyF3I | CTNAG | 1 cut(s) | 10 |
| Hsp92II | CATG | 2 cut(s) | 64, 100 |
| LguI | GCTCTTC | 2 cut(s) | 98, 165 |
| LpnPI | CCDG | 2 cut(s) | 30, 129 |
| LweI | GCATC | 2 cut(s) | 70, 144 |
| MboII | GAAGA | 3 cut(s) | 85, 89, 152 |
| MhlI | GDGCHC | 1 cut(s) | 111 |
| MluCI | AATT | 1 cut(s) | 50 |
| MmeI | TCCRAC | 1 cut(s) | 81 |
| MnlI | CCTC | 3 cut(s) | 16, 19, 94 |
| MseI | TTAA | 1 cut(s) | 168 |
| NlaIII | CATG | 2 cut(s) | 64, 100 |
| NlaIV | GGNNCC | 1 cut(s) | 110 |
| NspI | RCATGY | 1 cut(s) | 64 |
| PciI | ACATGT | 1 cut(s) | 60 |
| PciSI | GCTCTTC | 2 cut(s) | 98, 165 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 63 |
| PscI | ACATGT | 1 cut(s) | 60 |
| PspN4I | GGNNCC | 1 cut(s) | 110 |
| PstNI | CAGNNNCTG | 1 cut(s) | 17 |
| SapI | GCTCTTC | 2 cut(s) | 98, 165 |
| SaqAI | TTAA | 1 cut(s) | 168 |
| SduI | GDGCHC | 1 cut(s) | 111 |
| SetI | ASST | 5 cut(s) | 8, 73, 93, 129, 160 |
| SfaNI | GCATC | 2 cut(s) | 70, 144 |
| Sse9I | AATT | 1 cut(s) | 50 |
| TaqI | TCGA | 1 cut(s) | 163 |
| TasI | AATT | 1 cut(s) | 50 |
| Tru1I | TTAA | 1 cut(s) | 168 |
| Tru9I | TTAA | 1 cut(s) | 168 |
| TscAI | CASTG | 1 cut(s) | 18 |
| TspDTI | ATGAA | 1 cut(s) | 85 |
| TspRI | CASTG | 1 cut(s) | 18 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 63 |
| XapI | RAATTY | 1 cut(s) | 50 |
| XceI | RCATGY | 1 cut(s) | 64 |