Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005182

Physical Location & Seq

Genomic Coordinates Forward (+)

48917225 .. 48920958

Gene Structure 3734 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0337100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGTGTAAAACCTTATCCCCCGAGTGTGAAGCCAAAACCCTTGGCAAAAACCCCCCAACAAAAGATGCCCACAGCGGAGCAATGAAACGAATATGGAGGCTCTCCGACGCGGCCCAATCCGAGCTCTTCAGCCGCCACCGATGCTCCCCTAAACCCAAAACCCTAACCCCCTACACTTACACCCTCACCAACTCCGCCAATTTCAGATTCACTCGCGACGTCGTCAACAATGCCCAGAACCCGCCTCCTTCTCCTCCACCCAACTCCTTCTCAAGCGTCATCGCTCTCTTCACCGACCAGCCCAGCCCACAAGAGACCAGGGCCCGGGAGGATCTGGCCCGCAAGATCAAGCAGCTGAGGGCGGAGCTGGTTCAGAGCGCCGGCGATTCGGAGAAGATTGTTAGGGTTTTGGAGGAGAAGGGCTGTGAGTTTTTGTGGAGCAGTAATTTTAAGGATGTAATTCCTATTGTGGAGCTTATGCATCAGTTGCGTCATTGGCCTCATTTGGCCCTGGAGGTTTTTAATTGGAGAAGAAATCAGGCGGATGGTGGCACTCCTATGACGGCTGAGGAGTATACCAAGGCTATTACATTTGCAGGTAAAATTAAGAATGTTCAACTTGCCCTCGAGTTATTCGATGAAGCTGTAAACAAGCGGATCAAGACAACTTCTATGTATAATGCACTCATGAGTGCTTATGTGCTCAATGGCCATACTGCTAAATGTCAGTCTTTGTTTCGGGACCTCAAGAGGGAACAGTATATCAGACCTACCATTGTGACATACAACATTCTCATTTCCGTCTTTGGTCGATTGATGCTAGTTGATCATATGGAGGCAACTCTTCGGAGGTTAAAGGAATCAGATCTCTCCCCTAATTTAGGCACATACAATAATTTAATTGCTGGATACATTACTGCTTGGATGTGGGATAGAATGGAAAAAACTTTCGGAATGATGAAGGCAGGCCCTGTTAGTCCTGATATTAGCACCTACTTGCTAATGCTTCGAGGATATGCACATTCAGGTAATCTGGTAAAGATGGAGGAGACGTATGAGTTGGTGAAACATCATGTAAACGACAAGGAAATCCCATTGATAAGGGCTATGATATGTGCATATTGCAGTAGTTCTGTCACAGACAGAGTGCAAAAAATACACACACTGATGAACCTTATTCCAGAAAATCAATACAGGCCTTGGTTGAATGTAATGCTGATTAGGGTTTATGCTCAAGAGGATTGTTTTGAGGCGATGGAGAGGTCAATAAATGAAGCATTTGAGCGCAAAACCTCCGTACATACTGCCGGTTTGATGCGATCTATAGTTGCGAGTTATTTCAGATGCAAAGAGGTGGACAGACTAGCACATTTTGTGAAGCGTGCAGAATGTGCTAGGTGGAGAATTTGCCGGTCCCTATATCACTGTAAGATGGTCATGTATGCATCAGAACAGCGCTTAGAAGAAATGGAGAATGTCCTTGGTGAGATGGCGTGTTTTAAGTTGGATCGCACGAAGAAAACATTTTGGATATTGTACCATGCCTACTCTAGTTGTGGTCAAAGAAATAAGGTTGCACAAGTATTAGGATCAATGTGGAAGCATGGTTATGAAGTTCCATTGGAGGTATTGTCATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like FBA_1

Protein Analysis

546

Amino Acids

62.93

Weight (kDa)

9.14

Isoelectric Point (pI)

44.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	211 - 270	1.9e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	223 - 269	7.8e-08	PPR repeat family
PPR_2	PF13041	292 - 341	1.2e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005182)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g14300 FvH4_3g19610 FvH4_4g30860 FvH4_5g18841
rosa_chinensis	RchiOBHm_Chr1g0357401 RchiOBHm_Chr2g0112171 RchiOBHm_Chr2g0125391 RchiOBHm_Chr5g0054711 RchiOBHm_Chr5g0064471 RchiOBHm_Chr6g0271351 RchiOBHm_Chr7g0191401 RchiOBHm_Chr7g0214711
rosa_laevigata	RLG00000017451 RLG00000022476
rosa_multiflora	Rmu_sc0000331.1_g000014 Rmu_sc0000795.1_g000108 Rmu_sc0004866.1_g000026 Rmu_sc0005111.1_g000002 Rmu_sc0006642.1_g000002 Rmu_sc0006695.1_g000080 Rmu_sc0009740.1_g000002 Rmu_sc0021244.1_g000001 Rmu_sc0042233.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019300 Rroxscaffold_2G00085360
rosa_rugosa	Rorug04G0054100 Rorug05G0017000 Rorug06G0337100 Rorug07G0115500
rosa_samantha	Rh6AG133600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	222
Acc36I	ACCTGC	1 cut(s)	587
AccI	GTMKAC	1 cut(s)	575
AccII	CGCG	2 cut(s)	110, 216
AciI	CCGC	9 cut(s)	75, 110, 133, 195, 242, 340, 362, 542, 655
AclWI	GGATC	4 cut(s)	339, 665, 1515, 1597
AcoI	YGGCCR	1 cut(s)	709
AcsI	RAATTY	1 cut(s)	1404
AcuI	CTGAAG	1 cut(s)	112
AcyI	GRCGYC	1 cut(s)	219
AfaI	GTAC	2 cut(s)	1299, 1538
AfeI	AGCGCT	1 cut(s)	1457
AfiI	CCNNNNNNNGG	3 cut(s)	324, 751, 881
AgsI	TTSAA	2 cut(s)	617, 1207
AjnI	CCWGG	2 cut(s)	317, 510
AjuI	GAANNNNNNNTTGG	2 cut(s)	191, 223
AluBI	AGCT	5 cut(s)	124, 355, 367, 475, 644
AluI	AGCT	5 cut(s)	124, 355, 367, 475, 644
Alw21I	GWGCWC	2 cut(s)	126, 705
Alw26I	GTCTC	2 cut(s)	308, 1043
AlwI	GGATC	4 cut(s)	339, 665, 1515, 1597
AlwNI	CAGNNNCTG	1 cut(s)	971
Ama87I	CYCGRG	3 cut(s)	20, 324, 626
Aor51HI	AGCGCT	1 cut(s)	1457
AoxI	GGCC	8 cut(s)	111, 321, 336, 497, 507, 709, 967, 1196
ApaI	GGGCCC	1 cut(s)	325
ApeKI	GCWGC	1 cut(s)	352
ApoI	RAATTY	1 cut(s)	1404
AspLEI	GCGC	3 cut(s)	380, 1287, 1458
AspS9I	GGNCC	8 cut(s)	112, 321, 322, 337, 508, 742, 968, 1413
AsuC2I	CCSGG	2 cut(s)	325, 326
AsuHPI	GGTGA	4 cut(s)	178, 283, 1075, 1496
AvaI	CYCGRG	3 cut(s)	20, 324, 626
AvaII	GGWCC	2 cut(s)	742, 1413
BaeGI	GKGCMC	1 cut(s)	325
BalI	TGGCCA	1 cut(s)	711
BanII	GRGCYC	2 cut(s)	126, 325
Bbv12I	GWGCWC	2 cut(s)	126, 705
BbvCI	CCTCAGC	2 cut(s)	356, 567
BbvI	GCAGC	1 cut(s)	364
BccI	CCATC	5 cut(s)	539, 1036, 1249, 1426, 1483
BceAI	ACGGC	1 cut(s)	579
BciT130I	CCWGG	2 cut(s)	319, 512
BciVI	GTATCC	1 cut(s)	902
BclI	TGATCA	1 cut(s)	826
BcnI	CCSGG	2 cut(s)	325, 326
BcoDI	GTCTC	2 cut(s)	308, 1043
BfaI	CTAG	4 cut(s)	821, 1364, 1395, 1551
BfmI	CTRYAG	1 cut(s)	1323
BfoI	RGCGCY	2 cut(s)	381, 1459
BfuAI	ACCTGC	1 cut(s)	587
BfuI	GTATCC	1 cut(s)	902
BglII	AGATCT	1 cut(s)	865
BisI	GCNGC	3 cut(s)	111, 133, 353
BlsI	GCNGC	3 cut(s)	112, 134, 354
Bme1390I	CCNGG	4 cut(s)	319, 325, 326, 512
Bme18I	GGWCC	2 cut(s)	742, 1413
BmeT110I	CYCGRG	3 cut(s)	20, 324, 626
BmgT120I	GGNCC	8 cut(s)	112, 321, 322, 337, 508, 742, 968, 1413
BmiI	GGNNCC	3 cut(s)	323, 743, 1415
BmrFI	CCNGG	4 cut(s)	319, 325, 326, 512
BmsI	GCATC	7 cut(s)	55, 131, 490, 807, 1305, 1334, 1454
BpmI	CTGGAG	1 cut(s)	533
Bpu10I	CCTNAGC	2 cut(s)	356, 567
BpuEI	CTTGAG	3 cut(s)	256, 731, 1218
BpuMI	CCSGG	2 cut(s)	325, 326
BsaHI	GRCGYC	1 cut(s)	219
BsaI	GGTCTC	1 cut(s)	308
BsaJI	CCNNGG	7 cut(s)	40, 318, 324, 510, 579, 1199, 1480
BsaXI	ACNNNNNCTCC	5 cut(s)	128, 158, 1037, 1067, 1616
Bsc4I	CCNNNNNNNGG	3 cut(s)	324, 751, 881
Bse118I	RCCGGY	3 cut(s)	380, 1307, 1410
Bse3DI	GCAATG	1 cut(s)	87
BseBI	CCWGG	2 cut(s)	319, 512
BseDI	CCNNGG	7 cut(s)	40, 318, 324, 510, 579, 1199, 1480
BseGI	GGATG	3 cut(s)	460, 550, 930
BseLI	CCNNNNNNNGG	3 cut(s)	324, 751, 881
BseMI	GCAATG	1 cut(s)	87
BseMII	CTCAG	2 cut(s)	347, 558
BseRI	GAGGAG	4 cut(s)	243, 428, 584, 1061
BseSI	GKGCMC	1 cut(s)	325
BseXI	GCAGC	1 cut(s)	364
BseYI	CCCAGC	1 cut(s)	302
BsgI	GTGCAG	1 cut(s)	1404
Bsh1236I	CGCG	2 cut(s)	110, 216
BshFI	GGCC	8 cut(s)	113, 323, 338, 499, 509, 711, 969, 1198
BsiHKAI	GWGCWC	2 cut(s)	126, 705
BsiHKCI	CYCGRG	3 cut(s)	20, 324, 626
BsiSI	CCGG	4 cut(s)	325, 381, 1308, 1411
BslFI	GGGAC	2 cut(s)	755, 1399
BslI	CCNNNNNNNGG	3 cut(s)	324, 751, 881
BsmAI	GTCTC	2 cut(s)	308, 1043
BsmBI	CGTCTC	1 cut(s)	1043
BsmFI	GGGAC	2 cut(s)	755, 1399
BsnI	GGCC	8 cut(s)	113, 323, 338, 499, 509, 711, 969, 1198
Bso31I	GGTCTC	1 cut(s)	308
BsoBI	CYCGRG	3 cut(s)	20, 324, 626
Bsp120I	GGGCCC	1 cut(s)	321
Bsp1286I	GDGCHC	3 cut(s)	126, 325, 705
Bsp143I	GATC	8 cut(s)	331, 345, 657, 826, 865, 1319, 1507, 1589
Bsp68I	TCGCGA	1 cut(s)	216
BspACI	CCGC	9 cut(s)	75, 110, 133, 195, 242, 340, 362, 542, 655
BspANI	GGCC	8 cut(s)	113, 323, 338, 499, 509, 711, 969, 1198
BspCNI	CTCAG	2 cut(s)	348, 559
BspFNI	CGCG	2 cut(s)	110, 216
BspHI	TCATGA	2 cut(s)	687, 1637
BspLI	GGNNCC	3 cut(s)	323, 743, 1415
BspMI	ACCTGC	1 cut(s)	587
BspPI	GGATC	4 cut(s)	339, 665, 1515, 1597
BspQI	GCTCTTC	1 cut(s)	131
BspTNI	GGTCTC	1 cut(s)	308
BsrDI	GCAATG	1 cut(s)	87
BsrFI	RCCGGY	3 cut(s)	380, 1307, 1410
BssAI	RCCGGY	3 cut(s)	380, 1307, 1410
BssECI	CCNNGG	7 cut(s)	40, 318, 324, 510, 579, 1199, 1480
BssMI	GATC	8 cut(s)	331, 345, 657, 826, 865, 1319, 1507, 1589
BssNAI	GTATAC	1 cut(s)	576
BssNI	GRCGYC	1 cut(s)	219
BssT1I	CCWWGG	4 cut(s)	40, 579, 1199, 1480
Bst1107I	GTATAC	1 cut(s)	576
Bst2UI	CCWGG	2 cut(s)	319, 512
Bst4CI	ACNGT	2 cut(s)	759, 1427
Bst6I	CTCTTC	3 cut(s)	131, 293, 849
BstACI	GRCGYC	1 cut(s)	219
BstAPI	GCANNNNNTGC	2 cut(s)	487, 1391
BstC8I	GCNNGC	4 cut(s)	340, 382, 967, 1383
BstDEI	CTNAG	3 cut(s)	356, 567, 1459
BstENI	CCTNNNNNAGG	1 cut(s)	879
BstF5I	GGATG	3 cut(s)	460, 550, 930
BstFNI	CGCG	2 cut(s)	110, 216
BstH2I	RGCGCY	2 cut(s)	381, 1459
BstHHI	GCGC	3 cut(s)	380, 1287, 1458
BstKTI	GATC	8 cut(s)	334, 348, 660, 829, 868, 1322, 1510, 1592
BstMAI	GTCTC	2 cut(s)	308, 1043
BstMBI	GATC	8 cut(s)	331, 345, 657, 826, 865, 1319, 1507, 1589
BstMWI	GCNNNNNNNGC	4 cut(s)	141, 487, 496, 1391
BstNI	CCWGG	2 cut(s)	319, 512
BstSCI	CCNGG	4 cut(s)	317, 323, 324, 510
BstSFI	CTRYAG	1 cut(s)	1323
BstSLI	GKGCMC	1 cut(s)	325
BstUI	CGCG	2 cut(s)	110, 216
BstV1I	GCAGC	1 cut(s)	364
BstX2I	RGATCY	2 cut(s)	331, 865
BstYI	RGATCY	2 cut(s)	331, 865
BstZ17I	GTATAC	1 cut(s)	576
BsuI	GTATCC	1 cut(s)	902
BsuRI	GGCC	8 cut(s)	113, 323, 338, 499, 509, 711, 969, 1198
BtgZI	GCGATG	2 cut(s)	265, 1268
BtsCI	GGATG	3 cut(s)	460, 550, 930
BtsIMutI	CAGTG	2 cut(s)	1163, 1423
BtuMI	TCGCGA	1 cut(s)	216
BveI	ACCTGC	1 cut(s)	587
Cac8I	GCNNGC	4 cut(s)	340, 382, 967, 1383
CaiI	CAGNNNCTG	1 cut(s)	971
CciI	TCATGA	2 cut(s)	687, 1637
CfoI	GCGC	3 cut(s)	380, 1287, 1458
Cfr10I	RCCGGY	3 cut(s)	380, 1307, 1410
Cfr13I	GGNCC	8 cut(s)	112, 321, 322, 337, 508, 742, 968, 1413
Cfr9I	CCCGGG	1 cut(s)	324
CseI	GACGC	3 cut(s)	116, 265, 479
Csp6I	GTAC	2 cut(s)	1298, 1537
CviAII	CATG	6 cut(s)	688, 1073, 1438, 1541, 1604, 1638
CviQI	GTAC	2 cut(s)	1298, 1537
DdeI	CTNAG	3 cut(s)	356, 567, 1459
DpnI	GATC	8 cut(s)	333, 347, 659, 828, 867, 1321, 1509, 1591
DpnII	GATC	8 cut(s)	331, 345, 657, 826, 865, 1319, 1507, 1589
EaeI	YGGCCR	1 cut(s)	709
Eam1104I	CTCTTC	3 cut(s)	131, 293, 849
EarI	CTCTTC	3 cut(s)	131, 293, 849
EciI	GGCGGA	3 cut(s)	184, 377, 557
Ecl136II	GAGCTC	1 cut(s)	124
Eco130I	CCWWGG	4 cut(s)	40, 579, 1199, 1480
Eco147I	AGGCCT	1 cut(s)	1198
Eco24I	GRGCYC	2 cut(s)	126, 325
Eco31I	GGTCTC	1 cut(s)	308
Eco47I	GGWCC	2 cut(s)	742, 1413
Eco47III	AGCGCT	1 cut(s)	1457
Eco53kI	GAGCTC	1 cut(s)	124
Eco57I	CTGAAG	1 cut(s)	112
Eco88I	CYCGRG	3 cut(s)	20, 324, 626
EcoICRI	GAGCTC	1 cut(s)	124
EcoNI	CCTNNNNNAGG	1 cut(s)	879
EcoO109I	RGGNCCY	3 cut(s)	321, 742, 968
EcoRII	CCWGG	2 cut(s)	317, 510
EcoT14I	CCWWGG	4 cut(s)	40, 579, 1199, 1480
EcoT22I	ATGCAT	2 cut(s)	483, 1447
EcoT38I	GRGCYC	2 cut(s)	126, 325
ErhI	CCWWGG	4 cut(s)	40, 579, 1199, 1480
Esp3I	CGTCTC	1 cut(s)	1043
FaeI	CATG	6 cut(s)	691, 1076, 1441, 1544, 1607, 1641
FaqI	GGGAC	2 cut(s)	755, 1399
FatI	CATG	6 cut(s)	687, 1072, 1437, 1540, 1603, 1637
FauI	CCCGC	2 cut(s)	249, 347
FauNDI	CATATG	1 cut(s)	831
FbaI	TGATCA	1 cut(s)	826
FblI	GTMKAC	1 cut(s)	575
Fnu4HI	GCNGC	3 cut(s)	111, 133, 353
FokI	GGATG	3 cut(s)	467, 557, 937
FriOI	GRGCYC	2 cut(s)	126, 325
Fsp4HI	GCNGC	3 cut(s)	111, 133, 353
FspBI	CTAG	4 cut(s)	821, 1364, 1395, 1551
GlaI	GCGC	3 cut(s)	379, 1286, 1457
GluI	GCNGC	3 cut(s)	111, 133, 353
GsaI	CCCAGC	1 cut(s)	306
GsuI	CTGGAG	1 cut(s)	533
HaeII	RGCGCY	2 cut(s)	381, 1459
HaeIII	GGCC	8 cut(s)	113, 323, 338, 499, 509, 711, 969, 1198
HapII	CCGG	4 cut(s)	325, 381, 1308, 1411
HgaI	GACGC	3 cut(s)	116, 265, 479
HhaI	GCGC	3 cut(s)	380, 1287, 1458
Hin1I	GRCGYC	1 cut(s)	219
Hin1II	CATG	6 cut(s)	691, 1076, 1441, 1544, 1607, 1641
Hin6I	GCGC	3 cut(s)	378, 1285, 1456
HinP1I	GCGC	3 cut(s)	378, 1285, 1456
HincII	GTYRAC	1 cut(s)	226
HindII	GTYRAC	1 cut(s)	226
HinfI	GANTC	3 cut(s)	207, 386, 860
HpaII	CCGG	4 cut(s)	325, 381, 1308, 1411
HphI	GGTGA	4 cut(s)	178, 283, 1075, 1496
Hpy166II	GTNNAC	5 cut(s)	226, 576, 649, 1078, 1357
Hpy188III	TCNNGA	9 cut(s)	215, 661, 688, 740, 748, 980, 1181, 1235, 1638
Hpy8I	GTNNAC	5 cut(s)	226, 576, 649, 1078, 1357
Hpy99I	CGWCG	3 cut(s)	110, 221, 224
HpyAV	CCTTC	4 cut(s)	258, 277, 412, 955
HpyCH4III	ACNGT	2 cut(s)	759, 1427
HpyCH4IV	ACGT	2 cut(s)	219, 1052
HpyF10VI	GCNNNNNNNGC	4 cut(s)	141, 487, 496, 1391
HpyF3I	CTNAG	3 cut(s)	356, 567, 1459
HpySE526I	ACGT	2 cut(s)	219, 1052
Hsp92I	GRCGYC	1 cut(s)	219
Hsp92II	CATG	6 cut(s)	691, 1076, 1441, 1544, 1607, 1641
HspAI	GCGC	3 cut(s)	378, 1285, 1456
KroI	GCCGGC	1 cut(s)	380
KroNI	GCCGGC	1 cut(s)	382
Ksp22I	TGATCA	1 cut(s)	826
Kzo9I	GATC	8 cut(s)	331, 345, 657, 826, 865, 1319, 1507, 1589
LguI	GCTCTTC	1 cut(s)	131
LmnI	GCTCC	5 cut(s)	77, 149, 364, 438, 472
Lsp1109I	GCAGC	1 cut(s)	364
LweI	GCATC	7 cut(s)	55, 131, 490, 807, 1305, 1334, 1454
MaeI	CTAG	4 cut(s)	821, 1364, 1395, 1551
MaeII	ACGT	2 cut(s)	219, 1052
MaeIII	GTNAC	2 cut(s)	778, 1135
MalI	GATC	8 cut(s)	333, 347, 659, 828, 867, 1321, 1509, 1591
MboI	GATC	8 cut(s)	331, 345, 657, 826, 865, 1319, 1507, 1589
MboII	GAAGA	7 cut(s)	118, 280, 406, 543, 836, 1475, 1528
MflI	RGATCY	2 cut(s)	331, 865
MhlI	GDGCHC	3 cut(s)	126, 325, 705
MlsI	TGGCCA	1 cut(s)	711
MluCI	AATT	9 cut(s)	199, 445, 459, 523, 603, 877, 895, 900, 1404
MluNI	TGGCCA	1 cut(s)	711
MmeI	TCCRAC	2 cut(s)	129, 1485
Mox20I	TGGCCA	1 cut(s)	711
Mph1103I	ATGCAT	2 cut(s)	483, 1447
MreI	CGCCGGCG	1 cut(s)	380
MroNI	GCCGGC	1 cut(s)	380
MscI	TGGCCA	1 cut(s)	711
MseI	TTAA	6 cut(s)	450, 522, 606, 854, 899, 1500
MslI	CAYNNNNRTG	3 cut(s)	557, 1166, 1608
Msp20I	TGGCCA	1 cut(s)	711
MspA1I	CMGCKG	2 cut(s)	75, 355
MspI	CCGG	4 cut(s)	325, 381, 1308, 1411
MspR9I	CCNGG	4 cut(s)	319, 325, 326, 512
MvaI	CCWGG	2 cut(s)	319, 512
MvnI	CGCG	2 cut(s)	110, 216
MwoI	GCNNNNNNNGC	4 cut(s)	141, 487, 496, 1391
NaeI	GCCGGC	1 cut(s)	382
NciI	CCSGG	2 cut(s)	325, 326
NdeI	CATATG	1 cut(s)	831
NdeII	GATC	8 cut(s)	331, 345, 657, 826, 865, 1319, 1507, 1589
NgoMIV	GCCGGC	1 cut(s)	380
NlaIII	CATG	6 cut(s)	691, 1076, 1441, 1544, 1607, 1641
NlaIV	GGNNCC	3 cut(s)	323, 743, 1415
NmuCI	GTSAC	2 cut(s)	778, 1135
NruI	TCGCGA	1 cut(s)	216
NsiI	ATGCAT	2 cut(s)	483, 1447
PaeR7I	CTCGAG	1 cut(s)	626
PagI	TCATGA	2 cut(s)	687, 1637
PceI	AGGCCT	1 cut(s)	1198
PciSI	GCTCTTC	1 cut(s)	131
PcsI	WCGNNNNNNNCGW	1 cut(s)	633
PdiI	GCCGGC	1 cut(s)	382
PfeI	GAWTC	3 cut(s)	207, 386, 860
PflFI	GACNNNGTC	1 cut(s)	221
PkrI	GCNGC	3 cut(s)	112, 134, 354
PpuMI	RGGWCCY	1 cut(s)	742
Psp124BI	GAGCTC	1 cut(s)	126
Psp5II	RGGWCCY	1 cut(s)	742
Psp6I	CCWGG	2 cut(s)	317, 510
PspFI	CCCAGC	1 cut(s)	302
PspGI	CCWGG	2 cut(s)	317, 510
PspN4I	GGNNCC	3 cut(s)	323, 743, 1415
PspOMI	GGGCCC	1 cut(s)	321
PspPI	GGNCC	8 cut(s)	112, 321, 322, 337, 508, 742, 968, 1413
PspPPI	RGGWCCY	1 cut(s)	742
PspXI	VCTCGAGB	1 cut(s)	626
PstNI	CAGNNNCTG	1 cut(s)	971
PsuI	RGATCY	2 cut(s)	331, 865
PsyI	GACNNNGTC	1 cut(s)	221
PvuII	CAGCTG	1 cut(s)	355
RruI	TCGCGA	1 cut(s)	216
RsaI	GTAC	2 cut(s)	1299, 1538
RsaNI	GTAC	2 cut(s)	1298, 1537
RseI	CAYNNNNRTG	3 cut(s)	557, 1166, 1608
SacI	GAGCTC	1 cut(s)	126
SapI	GCTCTTC	1 cut(s)	131
SaqAI	TTAA	6 cut(s)	450, 522, 606, 854, 899, 1500
SatI	GCNGC	3 cut(s)	111, 133, 353
Sau3AI	GATC	8 cut(s)	331, 345, 657, 826, 865, 1319, 1507, 1589
Sau96I	GGNCC	8 cut(s)	112, 321, 322, 337, 508, 742, 968, 1413
ScrFI	CCNGG	4 cut(s)	319, 325, 326, 512
SduI	GDGCHC	3 cut(s)	126, 325, 705
SfaNI	GCATC	7 cut(s)	55, 131, 490, 807, 1305, 1334, 1454
SfcI	CTRYAG	1 cut(s)	1323
Sfr274I	CTCGAG	1 cut(s)	626
SgrAI	CRCCGGYG	1 cut(s)	380
SinI	GGWCC	2 cut(s)	742, 1413
SlaI	CTCGAG	1 cut(s)	626
SmaI	CCCGGG	1 cut(s)	326
SmiMI	CAYNNNNRTG	3 cut(s)	557, 1166, 1608
SmlI	CTYRAG	4 cut(s)	271, 626, 746, 1233
SmoI	CTYRAG	4 cut(s)	271, 626, 746, 1233
Sse9I	AATT	9 cut(s)	199, 445, 459, 523, 603, 877, 895, 900, 1404
SseBI	AGGCCT	1 cut(s)	1198
SsiI	CCGC	9 cut(s)	75, 110, 133, 195, 242, 340, 362, 542, 655
SspMI	CTAG	4 cut(s)	821, 1364, 1395, 1551
SstI	GAGCTC	1 cut(s)	126
StuI	AGGCCT	1 cut(s)	1198
StyD4I	CCNGG	4 cut(s)	317, 323, 324, 510
StyI	CCWWGG	4 cut(s)	40, 579, 1199, 1480
TaaI	ACNGT	2 cut(s)	759, 1427
TaiI	ACGT	2 cut(s)	222, 1055
TaqI	TCGA	4 cut(s)	627, 636, 811, 1009
TasI	AATT	9 cut(s)	199, 445, 459, 523, 603, 877, 895, 900, 1404
TauI	GCSGC	2 cut(s)	113, 135
TfiI	GAWTC	3 cut(s)	207, 386, 860
Tru1I	TTAA	6 cut(s)	450, 522, 606, 854, 899, 1500
Tru9I	TTAA	6 cut(s)	450, 522, 606, 854, 899, 1500
TscAI	CASTG	2 cut(s)	1170, 1430
TseFI	GTSAC	2 cut(s)	778, 1135
TseI	GCWGC	1 cut(s)	352
Tsp45I	GTSAC	2 cut(s)	778, 1135
TspDTI	ATGAA	6 cut(s)	98, 654, 974, 1184, 1287, 1626
TspGWI	ACGGA	2 cut(s)	790, 1285
TspMI	CCCGGG	1 cut(s)	324
TspRI	CASTG	2 cut(s)	1170, 1430
Tth111I	GACNNNGTC	1 cut(s)	221
VpaK11BI	GGWCC	2 cut(s)	742, 1413
XagI	CCTNNNNNAGG	1 cut(s)	879
XapI	RAATTY	1 cut(s)	1404
XhoI	CTCGAG	1 cut(s)	626
XmaI	CCCGGG	1 cut(s)	324
XmiI	GTMKAC	1 cut(s)	575
XspI	CTAG	4 cut(s)	821, 1364, 1395, 1551
ZraI	GACGTC	1 cut(s)	220
Zsp2I	ATGCAT	2 cut(s)	483, 1447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.