leucine-rich repeat extensin-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G25550 |
| fragaria_vesca | FvH4_2g30240 |
| malus_domestica | MD08G1135200.v1.1 MD15G1114000.v1.1 |
| prunus_persica | Prupe.1G465200_v2.0.a1 |
| pyrus_communis | pycom08g11410 pycom15g10230 |
| rosa_chinensis | RchiOBHm_Chr6g0312631 |
| rosa_laevigata | RLG00000010309 |
| rosa_multiflora | Rmu_sc0002859.1_g000007 Rmu_sc0034244.1_g000001 Rmu_ssc0000412.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00156630 |
| rosa_rugosa | Rorug06G0398000 |
| rosa_samantha | Rh6AG515300 Rh6BG524800 Rh6CG530200 |
| rosa_wichuraiana | Rw6G044750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 36, 49 |
| AcuI | CTGAAG | 1 cut(s) | 99 |
| AluBI | AGCT | 2 cut(s) | 83, 264 |
| AluI | AGCT | 2 cut(s) | 83, 264 |
| AlwI | GGATC | 2 cut(s) | 36, 49 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 113 |
| AsuC2I | CCSGG | 1 cut(s) | 145 |
| BamHI | GGATCC | 1 cut(s) | 41 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 140, 172 |
| BbsI | GAAGAC | 1 cut(s) | 61 |
| BcnI | CCSGG | 1 cut(s) | 145 |
| Bme1390I | CCNGG | 1 cut(s) | 145 |
| BmiI | GGNNCC | 1 cut(s) | 43 |
| BmrFI | CCNGG | 1 cut(s) | 145 |
| BmsI | GCATC | 1 cut(s) | 126 |
| BpiI | GAAGAC | 1 cut(s) | 61 |
| BpmI | CTGGAG | 1 cut(s) | 84 |
| BpuMI | CCSGG | 1 cut(s) | 145 |
| Bsa29I | ATCGAT | 1 cut(s) | 120 |
| Bse1I | ACTGG | 2 cut(s) | 38, 67 |
| Bse3DI | GCAATG | 1 cut(s) | 138 |
| BseCI | ATCGAT | 1 cut(s) | 120 |
| BseMI | GCAATG | 1 cut(s) | 138 |
| BseMII | CTCAG | 1 cut(s) | 21 |
| BseNI | ACTGG | 2 cut(s) | 38, 67 |
| BshVI | ATCGAT | 1 cut(s) | 120 |
| BsiSI | CCGG | 1 cut(s) | 144 |
| BslFI | GGGAC | 1 cut(s) | 33 |
| BsmFI | GGGAC | 1 cut(s) | 33 |
| Bsp143I | GATC | 2 cut(s) | 41, 121 |
| BspCNI | CTCAG | 1 cut(s) | 20 |
| BspDI | ATCGAT | 1 cut(s) | 120 |
| BspLI | GGNNCC | 1 cut(s) | 43 |
| BspPI | GGATC | 2 cut(s) | 36, 49 |
| BsrDI | GCAATG | 1 cut(s) | 138 |
| BsrI | ACTGG | 2 cut(s) | 38, 67 |
| BssMI | GATC | 2 cut(s) | 41, 121 |
| Bst4CI | ACNGT | 1 cut(s) | 109 |
| BstC8I | GCNNGC | 1 cut(s) | 115 |
| BstDEI | CTNAG | 1 cut(s) | 7 |
| BstKTI | GATC | 2 cut(s) | 44, 124 |
| BstMBI | GATC | 2 cut(s) | 41, 121 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 140 |
| BstSCI | CCNGG | 1 cut(s) | 143 |
| BstV2I | GAAGAC | 1 cut(s) | 61 |
| BstX2I | RGATCY | 1 cut(s) | 41 |
| BstYI | RGATCY | 1 cut(s) | 41 |
| Bsu15I | ATCGAT | 1 cut(s) | 120 |
| BsuTUI | ATCGAT | 1 cut(s) | 120 |
| BtsIMutI | CAGTG | 1 cut(s) | 60 |
| Cac8I | GCNNGC | 1 cut(s) | 115 |
| CaiI | CAGNNNCTG | 1 cut(s) | 113 |
| ClaI | ATCGAT | 1 cut(s) | 120 |
| CviAII | CATG | 1 cut(s) | 131 |
| CviJI | RGCY | 3 cut(s) | 29, 83, 264 |
| CviKI_1 | RGCY | 3 cut(s) | 29, 83, 264 |
| DdeI | CTNAG | 1 cut(s) | 7 |
| DpnI | GATC | 2 cut(s) | 43, 123 |
| DpnII | GATC | 2 cut(s) | 41, 121 |
| Eco57I | CTGAAG | 1 cut(s) | 99 |
| FaeI | CATG | 1 cut(s) | 134 |
| FaiI | YATR | 6 cut(s) | 132, 157, 187, 193, 210, 255 |
| FaqI | GGGAC | 1 cut(s) | 33 |
| FatI | CATG | 1 cut(s) | 130 |
| GsuI | CTGGAG | 1 cut(s) | 84 |
| HapII | CCGG | 1 cut(s) | 144 |
| Hin1II | CATG | 1 cut(s) | 134 |
| HincII | GTYRAC | 1 cut(s) | 165 |
| HindII | GTYRAC | 1 cut(s) | 165 |
| HinfI | GANTC | 3 cut(s) | 66, 151, 196 |
| HpaI | GTTAAC | 1 cut(s) | 165 |
| HpaII | CCGG | 1 cut(s) | 144 |
| Hpy166II | GTNNAC | 1 cut(s) | 165 |
| Hpy188I | TCNGA | 1 cut(s) | 10 |
| Hpy188III | TCNNGA | 1 cut(s) | 86 |
| Hpy8I | GTNNAC | 1 cut(s) | 165 |
| Hpy99I | CGWCG | 1 cut(s) | 92 |
| HpyCH4III | ACNGT | 1 cut(s) | 109 |
| HpyCH4V | TGCA | 2 cut(s) | 54, 285 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 140 |
| HpyF3I | CTNAG | 1 cut(s) | 7 |
| Hsp92II | CATG | 1 cut(s) | 134 |
| KspAI | GTTAAC | 1 cut(s) | 165 |
| Kzo9I | GATC | 2 cut(s) | 41, 121 |
| LpnPI | CCDG | 5 cut(s) | 2, 19, 48, 99, 157 |
| LweI | GCATC | 1 cut(s) | 126 |
| MalI | GATC | 2 cut(s) | 43, 123 |
| MboI | GATC | 2 cut(s) | 41, 121 |
| MboII | GAAGA | 2 cut(s) | 61, 160 |
| MflI | RGATCY | 1 cut(s) | 41 |
| MlyI | GAGTC | 1 cut(s) | 75 |
| MnlI | CCTC | 1 cut(s) | 24 |
| MseI | TTAA | 2 cut(s) | 164, 301 |
| MspI | CCGG | 1 cut(s) | 144 |
| MspR9I | CCNGG | 1 cut(s) | 145 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 140 |
| NciI | CCSGG | 1 cut(s) | 145 |
| NdeII | GATC | 2 cut(s) | 41, 121 |
| NlaIII | CATG | 1 cut(s) | 134 |
| NlaIV | GGNNCC | 1 cut(s) | 43 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 117 |
| PfeI | GAWTC | 2 cut(s) | 151, 196 |
| PleI | GAGTC | 1 cut(s) | 74 |
| PpsI | GAGTC | 1 cut(s) | 74 |
| PspN4I | GGNNCC | 1 cut(s) | 43 |
| PstNI | CAGNNNCTG | 1 cut(s) | 113 |
| PsuI | RGATCY | 1 cut(s) | 41 |
| SaqAI | TTAA | 2 cut(s) | 164, 301 |
| Sau3AI | GATC | 2 cut(s) | 41, 121 |
| SchI | GAGTC | 1 cut(s) | 75 |
| ScrFI | CCNGG | 1 cut(s) | 145 |
| SetI | ASST | 2 cut(s) | 85, 266 |
| SfaNI | GCATC | 1 cut(s) | 126 |
| StyD4I | CCNGG | 1 cut(s) | 143 |
| TaaI | ACNGT | 1 cut(s) | 109 |
| TaqI | TCGA | 2 cut(s) | 87, 120 |
| TfiI | GAWTC | 2 cut(s) | 151, 196 |
| Tru1I | TTAA | 2 cut(s) | 164, 301 |
| Tru9I | TTAA | 2 cut(s) | 164, 301 |
| TscAI | CASTG | 1 cut(s) | 67 |
| TspRI | CASTG | 1 cut(s) | 67 |