Rh6BG131500

Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
20515978 .. 20519029
3052 bp
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UTR
Exon/CDS
Intron
Rh6BG131500.1

Sequence Viewer

Length: 519 bp
ATGGGTTACCGAGAATTTGTAATTGTTGATTTAGGGAAGAGGATTGATACTCTGGAGCTGAGCACTATGGAGGATGTTGGTACTTCTTCTGCTCCAAAGAGCTCAAAGAGATGGATTACGAGGAAGAAAACCAGAGCAAAGTTGCTTGCTTGTATACTTACTAGGGCAACAAGGGAACCAATCAAGACACCATGCTTGTTTGGAAGTTTCAATTGCAAGAACCCTGCAGGATACATTAGGGACATTCATTCTACTTTAGCCCATCATCCTGGGGTCTTCCAGAGGATGTACTTAACAAATGCTGCAGTTGTGAAGGAGGCCAATACACTAGGGATGATGTGGCCAAATAGGACACAACCGTTGCACCTGCAGTTAGAACAGTTTGATTTTTATAATGCTACCCCACCAAAACAACCCTGGAGGAGGAAGTTAAACAGCCATGCTAATCTTCTTAAAGAATTTAGTATTACATTTAGGAAGGCAATAAAGATGAAGTGGCAGCACCTCAAGAGGTTTTAG

Protein Analysis

172

Amino Acids

20.02

Weight (kDa)

10.35

Isoelectric Point (pI)

35.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 393
AarI CACCTGC 1 cut(s) 375
Acc36I ACCTGC 1 cut(s) 375
AccI GTMKAC 1 cut(s) 154
AcoI YGGCCR 1 cut(s) 341
AcsI RAATTY 2 cut(s) 14, 458
AfaI GTAC 2 cut(s) 82, 290
AfiI CCNNNNNNNGG 1 cut(s) 423
AgsI TTSAA 1 cut(s) 211
AjnI CCWGG 2 cut(s) 268, 416
AluBI AGCT 2 cut(s) 58, 102
AluI AGCT 2 cut(s) 58, 102
Alw21I GWGCWC 2 cut(s) 65, 104
AoxI GGCC 2 cut(s) 318, 341
ApeKI GCWGC 2 cut(s) 302, 499
ApoI RAATTY 2 cut(s) 14, 458
BalI TGGCCA 1 cut(s) 343
BanII GRGCYC 1 cut(s) 104
BbsI GAAGAC 1 cut(s) 268
Bbv12I GWGCWC 2 cut(s) 65, 104
BbvI GCAGC 2 cut(s) 289, 511
BccI CCATC 2 cut(s) 105, 270
BciT130I CCWGG 2 cut(s) 270, 418
BciVI GTATCC 1 cut(s) 224
BfaI CTAG 2 cut(s) 162, 329
BfmI CTRYAG 3 cut(s) 225, 303, 368
BfuAI ACCTGC 1 cut(s) 375
BfuI GTATCC 1 cut(s) 224
BisI GCNGC 2 cut(s) 303, 500
BlpI GCTNAGC 1 cut(s) 59
BlsI GCNGC 2 cut(s) 304, 501
Bme1390I CCNGG 2 cut(s) 270, 418
BmiI GGNNCC 1 cut(s) 177
BmrFI CCNGG 2 cut(s) 270, 418
BpiI GAAGAC 1 cut(s) 268
BpmI CTGGAG 2 cut(s) 74, 439
Bpu1102I GCTNAGC 1 cut(s) 59
BpuEI CTTGAG 1 cut(s) 491
BsaJI CCNNGG 2 cut(s) 269, 416
Bsc4I CCNNNNNNNGG 1 cut(s) 423
BseBI CCWGG 2 cut(s) 270, 418
BseDI CCNNGG 2 cut(s) 269, 416
BseGI GGATG 4 cut(s) 79, 265, 291, 339
BseLI CCNNNNNNNGG 1 cut(s) 423
BseMII CTCAG 1 cut(s) 50
BseRI GAGGAG 1 cut(s) 436
BseXI GCAGC 2 cut(s) 289, 511
BshFI GGCC 2 cut(s) 320, 343
BsiHKAI GWGCWC 2 cut(s) 65, 104
BslFI GGGAC 1 cut(s) 254
BslI CCNNNNNNNGG 1 cut(s) 423
BsmFI GGGAC 1 cut(s) 254
BsnI GGCC 2 cut(s) 320, 343
Bsp1286I GDGCHC 2 cut(s) 65, 104
Bsp1720I GCTNAGC 1 cut(s) 59
BspANI GGCC 2 cut(s) 320, 343
BspCNI CTCAG 1 cut(s) 51
BspLI GGNNCC 1 cut(s) 177
BspMAI CTGCAG 3 cut(s) 229, 307, 372
BspMI ACCTGC 1 cut(s) 375
BssECI CCNNGG 2 cut(s) 269, 416
BssNAI GTATAC 1 cut(s) 155
Bst1107I GTATAC 1 cut(s) 155
Bst2UI CCWGG 2 cut(s) 270, 418
Bst4CI ACNGT 2 cut(s) 360, 381
Bst6I CTCTTC 1 cut(s) 32
BstC8I GCNNGC 1 cut(s) 147
BstDEI CTNAG 1 cut(s) 59
BstEII GGTNACC 1 cut(s) 5
BstENI CCTNNNNNAGG 1 cut(s) 421
BstF5I GGATG 4 cut(s) 79, 265, 291, 339
BstNI CCWGG 2 cut(s) 270, 418
BstPI GGTNACC 1 cut(s) 5
BstSCI CCNGG 2 cut(s) 268, 416
BstSFI CTRYAG 3 cut(s) 225, 303, 368
BstV1I GCAGC 2 cut(s) 289, 511
BstV2I GAAGAC 1 cut(s) 268
BstXI CCANNNNNNTGG 1 cut(s) 269
BstZ17I GTATAC 1 cut(s) 155
BsuI GTATCC 1 cut(s) 224
BsuRI GGCC 2 cut(s) 320, 343
BtsCI GGATG 4 cut(s) 79, 265, 291, 339
BveI ACCTGC 1 cut(s) 375
Cac8I GCNNGC 1 cut(s) 147
Csp6I GTAC 2 cut(s) 81, 289
CviAII CATG 2 cut(s) 192, 440
CviJI RGCY 6 cut(s) 58, 102, 260, 320, 343, 438
CviKI_1 RGCY 6 cut(s) 58, 102, 260, 320, 343, 438
CviQI GTAC 2 cut(s) 81, 289
DdeI CTNAG 1 cut(s) 59
EaeI YGGCCR 1 cut(s) 341
Eam1104I CTCTTC 1 cut(s) 32
EarI CTCTTC 1 cut(s) 32
Ecl136II GAGCTC 1 cut(s) 102
Eco24I GRGCYC 1 cut(s) 104
Eco53kI GAGCTC 1 cut(s) 102
Eco91I GGTNACC 1 cut(s) 5
EcoICRI GAGCTC 1 cut(s) 102
EcoNI CCTNNNNNAGG 1 cut(s) 421
EcoO65I GGTNACC 1 cut(s) 5
EcoRII CCWGG 2 cut(s) 268, 416
EcoT38I GRGCYC 1 cut(s) 104
FaeI CATG 2 cut(s) 195, 443
FaiI YATR 5 cut(s) 68, 155, 193, 393, 441
FaqI GGGAC 1 cut(s) 254
FatI CATG 2 cut(s) 191, 439
FblI GTMKAC 1 cut(s) 154
Fnu4HI GCNGC 2 cut(s) 303, 500
FokI GGATG 4 cut(s) 86, 252, 298, 346
FriOI GRGCYC 1 cut(s) 104
Fsp4HI GCNGC 2 cut(s) 303, 500
FspBI CTAG 2 cut(s) 162, 329
GluI GCNGC 2 cut(s) 303, 500
GsuI CTGGAG 2 cut(s) 74, 439
HaeIII GGCC 2 cut(s) 320, 343
Hin1II CATG 2 cut(s) 195, 443
Hpy166II GTNNAC 1 cut(s) 155
Hpy188III TCNNGA 4 cut(s) 53, 184, 280, 508
Hpy8I GTNNAC 1 cut(s) 155
HpyAV CCTTC 2 cut(s) 307, 472
HpyCH4III ACNGT 2 cut(s) 360, 381
HpyCH4V TGCA 5 cut(s) 216, 227, 305, 364, 370
HpyF3I CTNAG 1 cut(s) 59
Hsp92II CATG 2 cut(s) 195, 443
LmnI GCTCC 2 cut(s) 55, 97
Lsp1109I GCAGC 2 cut(s) 289, 511
MaeI CTAG 2 cut(s) 162, 329
MaeIII GTNAC 1 cut(s) 5
MboII GAAGA 5 cut(s) 49, 78, 136, 268, 440
MfeI CAATTG 1 cut(s) 211
MhlI GDGCHC 2 cut(s) 65, 104
MlsI TGGCCA 1 cut(s) 343
MluCI AATT 4 cut(s) 14, 21, 211, 458
MluNI TGGCCA 1 cut(s) 343
MnlI CCTC 9 cut(s) 33, 64, 114, 276, 310, 414, 417, 504, 515
Mox20I TGGCCA 1 cut(s) 343
MscI TGGCCA 1 cut(s) 343
MseI TTAA 3 cut(s) 293, 431, 453
Msp20I TGGCCA 1 cut(s) 343
MspR9I CCNGG 2 cut(s) 270, 418
MunI CAATTG 1 cut(s) 211
MvaI CCWGG 2 cut(s) 270, 418
NlaIII CATG 2 cut(s) 195, 443
NlaIV GGNNCC 1 cut(s) 177
PaqCI CACCTGC 1 cut(s) 375
PkrI GCNGC 2 cut(s) 304, 501
PsiI TTATAA 1 cut(s) 393
Psp124BI GAGCTC 1 cut(s) 104
Psp6I CCWGG 2 cut(s) 268, 416
PspEI GGTNACC 1 cut(s) 5
PspGI CCWGG 2 cut(s) 268, 416
PspN4I GGNNCC 1 cut(s) 177
PstI CTGCAG 3 cut(s) 229, 307, 372
RsaI GTAC 2 cut(s) 82, 290
RsaNI GTAC 2 cut(s) 81, 289
SacI GAGCTC 1 cut(s) 104
SaqAI TTAA 3 cut(s) 293, 431, 453
SatI GCNGC 2 cut(s) 303, 500
SbfI CCTGCAGG 1 cut(s) 229
ScrFI CCNGG 2 cut(s) 270, 418
SdaI CCTGCAGG 1 cut(s) 229
SduI GDGCHC 2 cut(s) 65, 104
SetI ASST 5 cut(s) 60, 104, 369, 507, 515
SfcI CTRYAG 3 cut(s) 225, 303, 368
SmlI CTYRAG 1 cut(s) 506
SmoI CTYRAG 1 cut(s) 506
Sse8387I CCTGCAGG 1 cut(s) 229
Sse9I AATT 4 cut(s) 14, 21, 211, 458
SspMI CTAG 2 cut(s) 162, 329
SstI GAGCTC 1 cut(s) 104
StyD4I CCNGG 2 cut(s) 268, 416
TaaI ACNGT 2 cut(s) 360, 381
TasI AATT 4 cut(s) 14, 21, 211, 458
TatI WGTACW 1 cut(s) 288
Tru1I TTAA 3 cut(s) 293, 431, 453
Tru9I TTAA 3 cut(s) 293, 431, 453
TseI GCWGC 2 cut(s) 302, 499
TspDTI ATGAA 2 cut(s) 236, 506
XagI CCTNNNNNAGG 1 cut(s) 421
XapI RAATTY 2 cut(s) 14, 458
XcmI CCANNNNNNNNNTGG 1 cut(s) 414
XmiI GTMKAC 1 cut(s) 154
XspI CTAG 2 cut(s) 162, 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.