Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0000943

Physical Location & Seq

Genomic Coordinates Reverse (-)

68321610 .. 68325125

Gene Structure 3516 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG476300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1101 bp

ATGAACAAACAGAGACGGCCACCGCCGGACCCAGTGGCTGTGAAGGTCACTGTGCCTCTGTTTCCATCCATCTCAACCTCTCCTATACACTGGTTCCGCAGACGGGTGCATAGTGCAGCACATGGGGTTGCTTCTGTTGCTTGTAGCTCGTCGATTGGAGCTGACAAAGTTATCAGCCAGGGTAGGGATGGAACTGTTAAGTGCTGGGATATTGGAGATGGAGGTCTATCCAGGACTCCCTCTGTGACGATCGCGACGAATGCTCACCACTTCTGTAAGCTTTCGTTGGTGAAGAGACCTCATTCTTGTTCTACACAAGTTGACGGGCCAAAGAATCATGACGGAGGTGAGCGGGAGACTACTGGTGCAGATACTCTGGATGATAATGAAGAAAAGGTCCAAGGGTATCTGTCTGAGCAGTCTAGAACCAATGAAGAAAATACTGAAGTTGGAGGATCTAAATACATTGCTATAGCAGGAGAGCAGTCTTCTGAGGTTGAGATTTGGGATCTTAATACTGCAGAAAGGTGTATGCGACTACCTCAAAGCTGTTCTGCTGGCTCCTCAGCTATTTCTACCAAGGAAAGAGGAATGTGCATGGCAGTTCAAGTATTTTTACCATTGGAATCACGGGGATTCCTAAATGTTGTGCCTGGTTATGAGGATGGCTCCATGCTTTGGTGGGATATTAGAAATCCAGGTGTTCCAGTTACATCTGTCAAGTTTCATTCAGAGCCAGTTTTAAGCCTATGCATTGATGGTTCATGCAATGGTGGTATCTCAGGAGCTGCAGATGAAAAAATTATGCTCTACAGTTTGGATAATTCCATGGGTGTGATAAAAAAAGAAATTGATTTGGAGCGACCTGGCATATCAAGCACCTCTATTCGACCTGATGGTAAAATATTTGCAACAGCTGGCTGGGATCACAGAGTGAGCGTATATAACTATCGCAAAGGAAATGCTTTGGCAATATTGAAGTACCACCATGCAACGTGTAATGCAGTCTCTTATTCAACAGATTGTAAGCTAATGGCCTCTGCATCAGAGGACACAGTGGTGGCACTTTGGAAACTCTATACTCCTCAAACCTGGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000075 GO:0000151 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006282 GO:0006810 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0009555 GO:0009636 GO:0009663 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009987 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0010162 GO:0010431 GO:0010496 GO:0010497 GO:0010564 GO:0016043 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0022611 GO:0031323 GO:0031461 GO:0031570 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033554 GO:0034330 GO:0035670 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045216 GO:0045786 GO:0045787 GO:0048229 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048608 GO:0048609 GO:0048700 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051179 GO:0051234 GO:0051239 GO:0051716 GO:0051726 GO:0060255 GO:0061458 GO:0065007 GO:0071156 GO:0071158 GO:0071695 GO:0071840 GO:0072718 GO:0080008 GO:0080090 GO:0080134 GO:0080135 GO:0090068 GO:0090567 GO:0097327 GO:0097439 GO:0099402 GO:1902494 GO:1990234 GO:2000026 GO:2000280 GO:2001020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

366

Amino Acids

39.81

Weight (kDa)

6.27

Isoelectric Point (pI)

41.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_Prp19	PF24814	216 - 359	1e-15	Prp19 WD40 domain
WD40_Gbeta	PF25391	217 - 357	4.5e-06	G protein beta WD-40 repeat protein
WD40_CDC20-Fz	PF24807	218 - 363	4.9e-10	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_2nd	PF25172	219 - 357	2.9e-08	WDR3 second beta-propeller domain
Beta-prop_THOC3	PF25174	220 - 360	8.6e-15	THOC3 beta-propeller domain
Beta-prop_EML_2	PF23414	221 - 361	1.6e-08	Echinoderm microtubule-associated protein second beta-propeller
WD40_WDHD1_1st	PF24817	239 - 361	9.6e-07	WDHD1 first WD40 domain
Beta-prop_WDR36-Utp21_2nd	PF25168	240 - 361	7.2e-08	WDR36/Utp21 second beta-propeller domain
WD40_MABP1-WDR62_2nd	PF24782	251 - 359	6.3e-08	MABP1/WDR62 second WD40 domain
Beta-prop_WDR5	PF25175	289 - 363	1.2e-13	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	291 - 361	3.5e-08	WDR3 first beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000943)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29860
fragaria_vesca	FvH4_2g39120 FvH4_2g39120 FvH4_2g39120 FvH4_2g39120 FvH4_2g39120 FvH4_2g39120 FvH4_2g39120
malus_domestica	MD08G1017100.v1.1 MD15G1016100.v1.1 MD15G1017900.v1.1 MD15G1018000.v1.1
prunus_persica	Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1
pyrus_communis	pycom08g01490 pycom15g01390
rosa_chinensis	RchiOBHm_Chr6g0272131 RchiOBHm_Chr6g0302231
rosa_laevigata	RLG00000011183 RLG00000013699
rosa_multiflora	Rmu_sc0013301.1_g000007 Rmu_sc0027601.1_g000001
rosa_roxburghii	Rroxscaffold_7G00165940 Rroxscaffold_7G00196580
rosa_rugosa	Rorug06G0065900 Rorug06G0313400.1
rosa_samantha	Rh6AG183100 Rh6BG184000 Rh6BG476300 Rh6CG184400 Rh6DG176100 Rh6DG425800
rosa_wichuraiana	Rw4G012510 Rw6G015760 Rw6G036890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	678
AccBSI	CCGCTC	1 cut(s)	352
AccII	CGCG	1 cut(s)	254
AciI	CCGC	3 cut(s)	23, 97, 352
AclWI	GGATC	3 cut(s)	463, 516, 933
AcoI	YGGCCR	1 cut(s)	17
AcuI	CTGAAG	1 cut(s)	465
AdeI	CACNNNGTG	1 cut(s)	934
AfaI	GTAC	1 cut(s)	983
AfiI	CCNNNNNNNGG	3 cut(s)	103, 184, 678
AflIII	ACRYGT	1 cut(s)	995
AgsI	TTSAA	3 cut(s)	608, 979, 1017
AjnI	CCWGG	6 cut(s)	177, 230, 652, 697, 865, 1091
AleI	CACNNNNGTG	1 cut(s)	1058
AluBI	AGCT	8 cut(s)	147, 161, 280, 549, 569, 788, 917, 1030
AluI	AGCT	8 cut(s)	147, 161, 280, 549, 569, 788, 917, 1030
Alw26I	GTCTC	4 cut(s)	7, 289, 350, 1012
AlwI	GGATC	3 cut(s)	463, 516, 933
AlwNI	CAGNNNCTG	2 cut(s)	38, 788
AoxI	GGCC	3 cut(s)	17, 326, 1035
ApeKI	GCWGC	2 cut(s)	116, 788
AspS9I	GGNCC	3 cut(s)	28, 326, 397
AsuHPI	GGTGA	3 cut(s)	257, 301, 359
AvaII	GGWCC	2 cut(s)	28, 397
BbsI	GAAGAC	1 cut(s)	480
BbvCI	CCTCAGC	1 cut(s)	565
BbvI	GCAGC	2 cut(s)	128, 775
BccI	CCATC	7 cut(s)	73, 77, 182, 212, 659, 752, 890
BceAI	ACGGC	1 cut(s)	32
BciT130I	CCWGG	6 cut(s)	179, 232, 654, 699, 867, 1093
BcoDI	GTCTC	4 cut(s)	7, 289, 350, 1012
BfaI	CTAG	1 cut(s)	423
BfmI	CTRYAG	4 cut(s)	471, 519, 789, 811
BisI	GCNGC	2 cut(s)	117, 789
BlsI	GCNGC	2 cut(s)	118, 790
Bme1390I	CCNGG	6 cut(s)	179, 232, 654, 699, 867, 1093
Bme18I	GGWCC	2 cut(s)	28, 397
BmgT120I	GGNCC	3 cut(s)	28, 326, 397
BmiI	GGNNCC	4 cut(s)	30, 95, 562, 670
BmrFI	CCNGG	6 cut(s)	179, 232, 654, 699, 867, 1093
BmrI	ACTGGG	1 cut(s)	26
BmsI	GCATC	1 cut(s)	1052
BmuI	ACTGGG	1 cut(s)	26
BpiI	GAAGAC	1 cut(s)	480
BplI	GAGNNNNNCTC	2 cut(s)	653, 685
Bpu10I	CCTNAGC	1 cut(s)	565
BsaI	GGTCTC	1 cut(s)	289
BsaJI	CCNNGG	5 cut(s)	178, 400, 579, 828, 1092
Bsc4I	CCNNNNNNNGG	3 cut(s)	103, 184, 678
Bse1I	ACTGG	5 cut(s)	32, 95, 367, 707, 737
Bse3DI	GCAATG	2 cut(s)	465, 775
BseBI	CCWGG	6 cut(s)	179, 232, 654, 699, 867, 1093
BseDI	CCNNGG	5 cut(s)	178, 400, 579, 828, 1092
BseGI	GGATG	4 cut(s)	65, 193, 385, 670
BseLI	CCNNNNNNNGG	3 cut(s)	103, 184, 678
BseMI	GCAATG	2 cut(s)	465, 775
BseMII	CTCAG	4 cut(s)	405, 483, 579, 795
BseNI	ACTGG	5 cut(s)	32, 95, 367, 707, 737
BseRI	GAGGAG	2 cut(s)	553, 1074
BseXI	GCAGC	2 cut(s)	128, 775
BseYI	CCCAGC	2 cut(s)	204, 921
BsgI	GTGCAG	2 cut(s)	135, 387
Bsh1236I	CGCG	1 cut(s)	254
Bsh1285I	CGRYCG	1 cut(s)	252
BshFI	GGCC	3 cut(s)	19, 328, 1037
BsiEI	CGRYCG	1 cut(s)	252
BsiSI	CCGG	1 cut(s)	26
BslI	CCNNNNNNNGG	3 cut(s)	103, 184, 678
BsmAI	GTCTC	4 cut(s)	7, 289, 350, 1012
BsmBI	CGTCTC	1 cut(s)	7
BsmI	GAATGC	1 cut(s)	265
BsnI	GGCC	3 cut(s)	19, 328, 1037
Bso31I	GGTCTC	1 cut(s)	289
Bsp143I	GATC	4 cut(s)	249, 455, 508, 925
Bsp19I	CCATGG	1 cut(s)	828
Bsp68I	TCGCGA	1 cut(s)	254
BspACI	CCGC	3 cut(s)	23, 97, 352
BspANI	GGCC	3 cut(s)	19, 328, 1037
BspCNI	CTCAG	4 cut(s)	406, 484, 578, 794
BspFNI	CGCG	1 cut(s)	254
BspHI	TCATGA	1 cut(s)	337
BspLI	GGNNCC	4 cut(s)	30, 95, 562, 670
BspMAI	CTGCAG	2 cut(s)	523, 793
BspPI	GGATC	3 cut(s)	463, 516, 933
BspTNI	GGTCTC	1 cut(s)	289
BsrBI	CCGCTC	1 cut(s)	352
BsrDI	GCAATG	2 cut(s)	465, 775
BsrI	ACTGG	5 cut(s)	32, 95, 367, 707, 737
BssECI	CCNNGG	5 cut(s)	178, 400, 579, 828, 1092
BssMI	GATC	4 cut(s)	249, 455, 508, 925
BssT1I	CCWWGG	3 cut(s)	400, 579, 828
Bst2UI	CCWGG	6 cut(s)	179, 232, 654, 699, 867, 1093
Bst4CI	ACNGT	4 cut(s)	52, 196, 815, 1057
Bst6I	CTCTTC	1 cut(s)	287
BstC8I	GCNNGC	2 cut(s)	559, 919
BstDEI	CTNAG	4 cut(s)	414, 492, 565, 781
BstDSI	CCRYGG	1 cut(s)	828
BstF5I	GGATG	4 cut(s)	65, 193, 385, 670
BstFNI	CGCG	1 cut(s)	254
BstKTI	GATC	4 cut(s)	252, 458, 511, 928
BstMAI	GTCTC	4 cut(s)	7, 289, 350, 1012
BstMBI	GATC	4 cut(s)	249, 455, 508, 925
BstMCI	CGRYCG	1 cut(s)	252
BstMWI	GCNNNNNNNGC	3 cut(s)	137, 260, 876
BstNI	CCWGG	6 cut(s)	179, 232, 654, 699, 867, 1093
BstSCI	CCNGG	6 cut(s)	177, 230, 652, 697, 865, 1091
BstSFI	CTRYAG	4 cut(s)	471, 519, 789, 811
BstUI	CGCG	1 cut(s)	254
BstV1I	GCAGC	2 cut(s)	128, 775
BstV2I	GAAGAC	1 cut(s)	480
BstX2I	RGATCY	2 cut(s)	455, 508
BstYI	RGATCY	2 cut(s)	455, 508
BsuRI	GGCC	3 cut(s)	19, 328, 1037
BtgI	CCRYGG	1 cut(s)	828
BtsCI	GGATG	4 cut(s)	65, 193, 385, 670
BtsIMutI	CAGTG	4 cut(s)	39, 48, 88, 1062
BtuMI	TCGCGA	1 cut(s)	254
Cac8I	GCNNGC	2 cut(s)	559, 919
CaiI	CAGNNNCTG	2 cut(s)	38, 788
CciI	TCATGA	1 cut(s)	337
Cfr13I	GGNCC	3 cut(s)	28, 326, 397
Csp6I	GTAC	1 cut(s)	982
CviAII	CATG	7 cut(s)	122, 338, 598, 673, 765, 829, 989
CviQI	GTAC	1 cut(s)	982
DdeI	CTNAG	4 cut(s)	414, 492, 565, 781
DpnI	GATC	4 cut(s)	251, 457, 510, 927
DpnII	GATC	4 cut(s)	249, 455, 508, 925
DraIII	CACNNNGTG	1 cut(s)	934
EaeI	YGGCCR	1 cut(s)	17
Eam1104I	CTCTTC	1 cut(s)	287
EarI	CTCTTC	1 cut(s)	287
Eco130I	CCWWGG	3 cut(s)	400, 579, 828
Eco31I	GGTCTC	1 cut(s)	289
Eco47I	GGWCC	2 cut(s)	28, 397
Eco57I	CTGAAG	1 cut(s)	465
EcoRII	CCWGG	6 cut(s)	177, 230, 652, 697, 865, 1091
EcoT14I	CCWWGG	3 cut(s)	400, 579, 828
EcoT22I	ATGCAT	1 cut(s)	755
ErhI	CCWWGG	3 cut(s)	400, 579, 828
Esp3I	CGTCTC	1 cut(s)	7
FaeI	CATG	7 cut(s)	125, 341, 601, 676, 768, 832, 992
FatI	CATG	7 cut(s)	121, 337, 597, 672, 764, 828, 988
FauI	CCCGC	1 cut(s)	345
Fnu4HI	GCNGC	2 cut(s)	117, 789
FokI	GGATG	4 cut(s)	52, 200, 392, 677
Fsp4HI	GCNGC	2 cut(s)	117, 789
FspBI	CTAG	1 cut(s)	423
GluI	GCNGC	2 cut(s)	117, 789
GsaI	CCCAGC	2 cut(s)	208, 925
HaeIII	GGCC	3 cut(s)	19, 328, 1037
HapII	CCGG	1 cut(s)	26
Hin1II	CATG	7 cut(s)	125, 341, 601, 676, 768, 832, 992
HincII	GTYRAC	1 cut(s)	322
HindII	GTYRAC	1 cut(s)	322
HindIII	AAGCTT	1 cut(s)	278
HinfI	GANTC	4 cut(s)	235, 334, 626, 636
HpaII	CCGG	1 cut(s)	26
HphI	GGTGA	3 cut(s)	257, 301, 359
Hpy166II	GTNNAC	1 cut(s)	322
Hpy188I	TCNGA	4 cut(s)	415, 493, 733, 1048
Hpy188III	TCNNGA	5 cut(s)	253, 338, 377, 423, 783
Hpy8I	GTNNAC	1 cut(s)	322
Hpy99I	CGWCG	2 cut(s)	154, 259
HpyAV	CCTTC	1 cut(s)	37
HpyCH4III	ACNGT	4 cut(s)	52, 196, 815, 1057
HpyCH4IV	ACGT	1 cut(s)	995
HpyF10VI	GCNNNNNNNGC	3 cut(s)	137, 260, 876
HpyF3I	CTNAG	4 cut(s)	414, 492, 565, 781
HpySE526I	ACGT	1 cut(s)	995
Hsp92II	CATG	7 cut(s)	125, 341, 601, 676, 768, 832, 992
Kzo9I	GATC	4 cut(s)	249, 455, 508, 925
LmnI	GCTCC	5 cut(s)	158, 566, 674, 785, 859
Lsp1109I	GCAGC	2 cut(s)	128, 775
LweI	GCATC	1 cut(s)	1052
MaeI	CTAG	1 cut(s)	423
MaeII	ACGT	1 cut(s)	995
MaeIII	GTNAC	3 cut(s)	46, 244, 709
MalI	GATC	4 cut(s)	251, 457, 510, 927
MbiI	CCGCTC	1 cut(s)	352
MboI	GATC	4 cut(s)	249, 455, 508, 925
MboII	GAAGA	4 cut(s)	304, 401, 446, 480
MflI	RGATCY	2 cut(s)	455, 508
MluCI	AATT	3 cut(s)	801, 823, 849
MlyI	GAGTC	1 cut(s)	229
MmeI	TCCRAC	1 cut(s)	430
Mph1103I	ATGCAT	1 cut(s)	755
MseI	TTAA	3 cut(s)	198, 513, 743
MslI	CAYNNNNRTG	2 cut(s)	833, 1058
MspA1I	CMGCKG	1 cut(s)	917
MspI	CCGG	1 cut(s)	26
MspR9I	CCNGG	6 cut(s)	179, 232, 654, 699, 867, 1093
Mva1269I	GAATGC	1 cut(s)	265
MvaI	CCWGG	6 cut(s)	179, 232, 654, 699, 867, 1093
MvnI	CGCG	1 cut(s)	254
MwoI	GCNNNNNNNGC	3 cut(s)	137, 260, 876
NcoI	CCATGG	1 cut(s)	828
NdeII	GATC	4 cut(s)	249, 455, 508, 925
NlaIII	CATG	7 cut(s)	125, 341, 601, 676, 768, 832, 992
NlaIV	GGNNCC	4 cut(s)	30, 95, 562, 670
NmuCI	GTSAC	2 cut(s)	46, 244
NruI	TCGCGA	1 cut(s)	254
NsiI	ATGCAT	1 cut(s)	755
OliI	CACNNNNGTG	1 cut(s)	1058
PagI	TCATGA	1 cut(s)	337
PcsI	WCGNNNNNNNCGW	1 cut(s)	254
PctI	GAATGC	1 cut(s)	265
PfeI	GAWTC	3 cut(s)	334, 626, 636
PflMI	CCANNNNNTGG	1 cut(s)	678
PfoI	TCCNGGA	1 cut(s)	230
PkrI	GCNGC	2 cut(s)	118, 790
Ple19I	CGATCG	1 cut(s)	252
PleI	GAGTC	1 cut(s)	229
PpsI	GAGTC	1 cut(s)	229
Psp6I	CCWGG	6 cut(s)	177, 230, 652, 697, 865, 1091
PspFI	CCCAGC	2 cut(s)	204, 921
PspGI	CCWGG	6 cut(s)	177, 230, 652, 697, 865, 1091
PspN4I	GGNNCC	4 cut(s)	30, 95, 562, 670
PspPI	GGNCC	3 cut(s)	28, 326, 397
PstI	CTGCAG	2 cut(s)	523, 793
PstNI	CAGNNNCTG	2 cut(s)	38, 788
PsuI	RGATCY	2 cut(s)	455, 508
PvuI	CGATCG	1 cut(s)	252
PvuII	CAGCTG	1 cut(s)	917
RruI	TCGCGA	1 cut(s)	254
RsaI	GTAC	1 cut(s)	983
RsaNI	GTAC	1 cut(s)	982
RseI	CAYNNNNRTG	2 cut(s)	833, 1058
SaqAI	TTAA	3 cut(s)	198, 513, 743
SatI	GCNGC	2 cut(s)	117, 789
Sau3AI	GATC	4 cut(s)	249, 455, 508, 925
Sau96I	GGNCC	3 cut(s)	28, 326, 397
SchI	GAGTC	1 cut(s)	229
ScrFI	CCNGG	6 cut(s)	179, 232, 654, 699, 867, 1093
SfaNI	GCATC	1 cut(s)	1052
SfcI	CTRYAG	4 cut(s)	471, 519, 789, 811
SinI	GGWCC	2 cut(s)	28, 397
SmiMI	CAYNNNNRTG	2 cut(s)	833, 1058
Sse9I	AATT	3 cut(s)	801, 823, 849
SsiI	CCGC	3 cut(s)	23, 97, 352
SspI	AATATT	2 cut(s)	906, 975
SspMI	CTAG	1 cut(s)	423
StyD4I	CCNGG	6 cut(s)	177, 230, 652, 697, 865, 1091
StyI	CCWWGG	3 cut(s)	400, 579, 828
TaaI	ACNGT	4 cut(s)	52, 196, 815, 1057
TaiI	ACGT	1 cut(s)	998
TaqI	TCGA	2 cut(s)	152, 889
TasI	AATT	3 cut(s)	801, 823, 849
TfiI	GAWTC	3 cut(s)	334, 626, 636
Tru1I	TTAA	3 cut(s)	198, 513, 743
Tru9I	TTAA	3 cut(s)	198, 513, 743
TscAI	CASTG	4 cut(s)	39, 55, 95, 1062
TseFI	GTSAC	2 cut(s)	46, 244
TseI	GCWGC	2 cut(s)	116, 788
Tsp45I	GTSAC	2 cut(s)	46, 244
TspDTI	ATGAA	6 cut(s)	17, 402, 447, 716, 753, 810
TspGWI	ACGGA	1 cut(s)	357
TspRI	CASTG	4 cut(s)	39, 55, 95, 1062
Van91I	CCANNNNNTGG	1 cut(s)	678
VpaK11BI	GGWCC	2 cut(s)	28, 397
XbaI	TCTAGA	1 cut(s)	422
XcmI	CCANNNNNNNNNTGG	1 cut(s)	185
XspI	CTAG	1 cut(s)	423
Zsp2I	ATGCAT	1 cut(s)	755

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.