Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0000943

Physical Location & Seq

Genomic Coordinates Forward (+)

60639907 .. 60645863

Gene Structure 5957 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG425800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1131 bp

ATGGAAGAGAGAGATGAGGTTGGGAGGTCTGACCTTGACCTGTACGTGCGAGCTGAAAAGCTCCGGTACGGCGGCGGTGGTGGATTTGCCGGAGGGAGTGAGGGGAGGTCACCGTGCCTCTGTTTCCATCCATCTCAACCTCTCCTATACACTGGTTCCGCAGACGGTGAGTTGCGGATTTGGGACACTCTGCAGAATCGGACGATAGTATCAGCAGGGGTGCATAGTGCAGCACATGGGGTTGCTTCTGTTGCTTGTAGCTCGTCGATTGGAGCTGAAAAAGTTATCAGCCAGGGTAGGGATGGAACTGTTAAGTGCTGGGATATTGGAGATGGAGGTCTATCCAGGACTCCCTCTGTGACGATCGCGACGAATGCTCACCACTTCTGTAAGCTTTCGTTGGTGAAGAGACCTCATTCTTGTTCTACACAAGTTGACGGGCCAAAGCATCATGACGGAGAAAATACTGAAGTTGGAGGATCTAAATACATTGCTATAGCAGGAGAGCAGTCTTCTGAGGTTGAGATTTGGGATCTTAATACTGCAGAAAGGTGTATGCAACTACCTCAAAGCTGTTCTGCTGGCTCCTCAGCTATTTCTACCAAGGAAAGAGGAATGTGCATGGCAGTTCAAGTATTTTTACCATTGGAATCACGGGGATTCCTAAATGTTGTGGCTGGCTATGAGGATGGCTCCATGCTTTGGTGGGATATTAGAAATCCAGGTGTTCCAGTTACATCTGTCAAGTTTCATTCAGAGCCAGTTTTAAGCCTATGCATTGATGGTTCATGCAATGGTGGTATCTCAGGAGCTGCAGATGAAAAAATTATGCTTTACAGTTTGGATAATTCCATGGGTACATGTGTGATAAAAAAAGAAATTGATTTGGAGCGACCTGGCATATCAAGCACCTCTATTCGACCTGATGGTAAAATATTTGCAACAGCTGGCTGGGATCACAGAGTGAGCGTATATAACTATCGCAAAGGAAATGCTTTGGCAATATTGAAGTACCACCATGCAACGTGTAATGCAGTCTCTTATTCAACAGATTGTAAGCTAATGGCCTCTGCATCAGAGGACACAGTGGTGGCACTTTGGAAACTCTATACTCCTCAAACCTGGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000075 GO:0000151 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006282 GO:0006810 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0009555 GO:0009636 GO:0009663 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009987 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0010162 GO:0010431 GO:0010496 GO:0010497 GO:0010564 GO:0016043 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0022611 GO:0031323 GO:0031461 GO:0031570 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033554 GO:0034330 GO:0035670 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045216 GO:0045786 GO:0045787 GO:0048229 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048608 GO:0048609 GO:0048700 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051179 GO:0051234 GO:0051239 GO:0051716 GO:0051726 GO:0060255 GO:0061458 GO:0065007 GO:0071156 GO:0071158 GO:0071695 GO:0071840 GO:0072718 GO:0080008 GO:0080090 GO:0080134 GO:0080135 GO:0090068 GO:0090567 GO:0097327 GO:0097439 GO:0099402 GO:1902494 GO:1990234 GO:2000026 GO:2000280 GO:2001020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

376

Amino Acids

40.45

Weight (kDa)

5.86

Isoelectric Point (pI)

35.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	39 - 117	1.2e-07	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	39 - 111	6.2e-08	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	39 - 124	3.7e-06	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	39 - 130	1.3e-06	WDHD1 first WD40 domain
Beta-prop_TEP1_2nd	PF25047	45 - 110	5.4e-07	TEP-1 second beta-propeller
Beta-prop_WDR3_1st	PF25173	171 - 291	9.8e-06	WDR3 first beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	212 - 368	2.1e-09	WDR3 second beta-propeller domain
WD40_Gbeta	PF25391	223 - 367	4.5e-06	G protein beta WD-40 repeat protein
WD40_Prp19	PF24814	224 - 369	5.7e-16	Prp19 WD40 domain
WD40_CDC20-Fz	PF24807	224 - 373	4e-10	CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd	PF25047	224 - 371	7.7e-07	TEP-1 second beta-propeller
Beta-prop_THOC3	PF25174	225 - 370	7.1e-15	THOC3 beta-propeller domain
Beta-prop_EML_2	PF23414	225 - 371	3.8e-08	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	225 - 371	1.1e-07	WDR36/Utp21 second beta-propeller domain
WD40_WDHD1_1st	PF24817	244 - 371	2.9e-07	WDHD1 first WD40 domain
WD40_MABP1-WDR62_2nd	PF24782	258 - 369	9.8e-09	MABP1/WDR62 second WD40 domain
Beta-prop_WDR5	PF25175	299 - 373	1.3e-13	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	301 - 371	4.1e-08	WDR3 first beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000943)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29860
fragaria_vesca	FvH4_2g39120 FvH4_2g39120 FvH4_2g39120 FvH4_2g39120 FvH4_2g39120 FvH4_2g39120 FvH4_2g39120
malus_domestica	MD08G1017100.v1.1 MD15G1016100.v1.1 MD15G1017900.v1.1 MD15G1018000.v1.1
prunus_persica	Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1 Prupe.1G369900_v2.0.a1
pyrus_communis	pycom08g01490 pycom15g01390
rosa_chinensis	RchiOBHm_Chr6g0272131 RchiOBHm_Chr6g0302231
rosa_laevigata	RLG00000011183 RLG00000013699
rosa_multiflora	Rmu_sc0013301.1_g000007 Rmu_sc0027601.1_g000001
rosa_roxburghii	Rroxscaffold_7G00165940 Rroxscaffold_7G00196580
rosa_rugosa	Rorug06G0065900 Rorug06G0313400.1
rosa_samantha	Rh6AG183100 Rh6BG184000 Rh6BG476300 Rh6CG184400 Rh6DG176100 Rh6DG425800
rosa_wichuraiana	Rw4G012510 Rw6G015760 Rw6G036890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	702
AccII	CGCG	1 cut(s)	368
AciI	CCGC	4 cut(s)	72, 75, 159, 175
AclWI	GGATC	3 cut(s)	487, 540, 963
AcuI	CTGAAG	1 cut(s)	489
AdeI	CACNNNGTG	1 cut(s)	964
AfaI	GTAC	4 cut(s)	44, 68, 859, 1013
AfiI	CCNNNNNNNGG	2 cut(s)	298, 702
AflIII	ACRYGT	2 cut(s)	860, 1025
AgsI	TTSAA	3 cut(s)	632, 1009, 1047
AjnI	CCWGG	5 cut(s)	291, 344, 721, 895, 1121
AleI	CACNNNNGTG	1 cut(s)	1088
Alw26I	GTCTC	2 cut(s)	403, 1042
AlwI	GGATC	3 cut(s)	487, 540, 963
AlwNI	CAGNNNCTG	1 cut(s)	812
AoxI	GGCC	2 cut(s)	440, 1065
ApeKI	GCWGC	2 cut(s)	230, 812
AspS9I	GGNCC	1 cut(s)	440
AsuHPI	GGTGA	4 cut(s)	102, 179, 371, 415
BaeI	ACNNNNGTAYC	4 cut(s)	192, 225, 849, 882
BbsI	GAAGAC	1 cut(s)	504
BbvCI	CCTCAGC	1 cut(s)	589
BbvI	GCAGC	2 cut(s)	242, 799
BccI	CCATC	7 cut(s)	135, 139, 296, 326, 683, 776, 920
BceAI	ACGGC	1 cut(s)	85
BciT130I	CCWGG	5 cut(s)	293, 346, 723, 897, 1123
BcoDI	GTCTC	2 cut(s)	403, 1042
BfmI	CTRYAG	4 cut(s)	191, 495, 543, 813
BisI	GCNGC	3 cut(s)	73, 231, 813
BlsI	GCNGC	3 cut(s)	74, 232, 814
Bme1390I	CCNGG	5 cut(s)	293, 346, 723, 897, 1123
BmgT120I	GGNCC	1 cut(s)	440
BmiI	GGNNCC	3 cut(s)	157, 586, 694
BmrFI	CCNGG	5 cut(s)	293, 346, 723, 897, 1123
BmsI	GCATC	2 cut(s)	457, 1082
BpiI	GAAGAC	1 cut(s)	504
BplI	GAGNNNNNCTC	2 cut(s)	677, 709
Bpu10I	CCTNAGC	1 cut(s)	589
BsaAI	YACGTR	1 cut(s)	46
BsaI	GGTCTC	1 cut(s)	403
BsaJI	CCNNGG	4 cut(s)	292, 603, 852, 1122
BsaWI	WCCGGW	1 cut(s)	63
Bsc4I	CCNNNNNNNGG	2 cut(s)	298, 702
Bse1I	ACTGG	3 cut(s)	157, 731, 761
Bse3DI	GCAATG	2 cut(s)	489, 799
BseBI	CCWGG	5 cut(s)	293, 346, 723, 897, 1123
BseDI	CCNNGG	4 cut(s)	292, 603, 852, 1122
BseGI	GGATG	3 cut(s)	127, 307, 694
BseLI	CCNNNNNNNGG	2 cut(s)	298, 702
BseMI	GCAATG	2 cut(s)	489, 799
BseMII	CTCAG	3 cut(s)	507, 603, 819
BseNI	ACTGG	3 cut(s)	157, 731, 761
BseRI	GAGGAG	2 cut(s)	577, 1104
BseXI	GCAGC	2 cut(s)	242, 799
BseYI	CCCAGC	2 cut(s)	318, 951
BsgI	GTGCAG	1 cut(s)	249
Bsh1236I	CGCG	1 cut(s)	368
Bsh1285I	CGRYCG	1 cut(s)	366
BshFI	GGCC	2 cut(s)	442, 1067
BsiEI	CGRYCG	1 cut(s)	366
BsiSI	CCGG	2 cut(s)	64, 90
BslFI	GGGAC	1 cut(s)	197
BslI	CCNNNNNNNGG	2 cut(s)	298, 702
BsmAI	GTCTC	2 cut(s)	403, 1042
BsmFI	GGGAC	1 cut(s)	197
BsmI	GAATGC	1 cut(s)	379
BsnI	GGCC	2 cut(s)	442, 1067
Bso31I	GGTCTC	1 cut(s)	403
Bsp143I	GATC	4 cut(s)	363, 479, 532, 955
Bsp19I	CCATGG	1 cut(s)	852
Bsp68I	TCGCGA	1 cut(s)	368
BspACI	CCGC	4 cut(s)	72, 75, 159, 175
BspANI	GGCC	2 cut(s)	442, 1067
BspCNI	CTCAG	3 cut(s)	508, 602, 818
BspFNI	CGCG	1 cut(s)	368
BspHI	TCATGA	1 cut(s)	451
BspLI	GGNNCC	3 cut(s)	157, 586, 694
BspMAI	CTGCAG	3 cut(s)	195, 547, 817
BspPI	GGATC	3 cut(s)	487, 540, 963
BspTNI	GGTCTC	1 cut(s)	403
BsrDI	GCAATG	2 cut(s)	489, 799
BsrI	ACTGG	3 cut(s)	157, 731, 761
BssECI	CCNNGG	4 cut(s)	292, 603, 852, 1122
BssMI	GATC	4 cut(s)	363, 479, 532, 955
BssT1I	CCWWGG	2 cut(s)	603, 852
Bst2UI	CCWGG	5 cut(s)	293, 346, 723, 897, 1123
Bst4CI	ACNGT	5 cut(s)	114, 167, 310, 839, 1087
Bst6I	CTCTTC	1 cut(s)	401
BstBAI	YACGTR	1 cut(s)	46
BstC8I	GCNNGC	4 cut(s)	51, 583, 679, 949
BstDEI	CTNAG	3 cut(s)	516, 589, 805
BstDSI	CCRYGG	1 cut(s)	852
BstEII	GGTNACC	1 cut(s)	108
BstF5I	GGATG	3 cut(s)	127, 307, 694
BstFNI	CGCG	1 cut(s)	368
BstKTI	GATC	4 cut(s)	366, 482, 535, 958
BstMAI	GTCTC	2 cut(s)	403, 1042
BstMBI	GATC	4 cut(s)	363, 479, 532, 955
BstMCI	CGRYCG	1 cut(s)	366
BstMWI	GCNNNNNNNGC	3 cut(s)	251, 374, 906
BstNI	CCWGG	5 cut(s)	293, 346, 723, 897, 1123
BstNSI	RCATGY	1 cut(s)	864
BstPI	GGTNACC	1 cut(s)	108
BstSCI	CCNGG	5 cut(s)	291, 344, 721, 895, 1121
BstSFI	CTRYAG	4 cut(s)	191, 495, 543, 813
BstUI	CGCG	1 cut(s)	368
BstV1I	GCAGC	2 cut(s)	242, 799
BstV2I	GAAGAC	1 cut(s)	504
BstX2I	RGATCY	2 cut(s)	479, 532
BstYI	RGATCY	2 cut(s)	479, 532
BsuRI	GGCC	2 cut(s)	442, 1067
BtgI	CCRYGG	1 cut(s)	852
BtsCI	GGATG	3 cut(s)	127, 307, 694
BtsIMutI	CAGTG	2 cut(s)	150, 1092
BtuMI	TCGCGA	1 cut(s)	368
Cac8I	GCNNGC	4 cut(s)	51, 583, 679, 949
CaiI	CAGNNNCTG	1 cut(s)	812
CciI	TCATGA	1 cut(s)	451
Cfr13I	GGNCC	1 cut(s)	440
Csp6I	GTAC	4 cut(s)	43, 67, 858, 1012
CviAII	CATG	8 cut(s)	236, 452, 622, 697, 789, 853, 861, 1019
CviQI	GTAC	4 cut(s)	43, 67, 858, 1012
DdeI	CTNAG	3 cut(s)	516, 589, 805
DpnI	GATC	4 cut(s)	365, 481, 534, 957
DpnII	GATC	4 cut(s)	363, 479, 532, 955
DraIII	CACNNNGTG	1 cut(s)	964
Eam1104I	CTCTTC	1 cut(s)	401
EarI	CTCTTC	1 cut(s)	401
Eco130I	CCWWGG	2 cut(s)	603, 852
Eco31I	GGTCTC	1 cut(s)	403
Eco57I	CTGAAG	1 cut(s)	489
Eco91I	GGTNACC	1 cut(s)	108
EcoO65I	GGTNACC	1 cut(s)	108
EcoRII	CCWGG	5 cut(s)	291, 344, 721, 895, 1121
EcoT14I	CCWWGG	2 cut(s)	603, 852
EcoT22I	ATGCAT	1 cut(s)	779
ErhI	CCWWGG	2 cut(s)	603, 852
FaeI	CATG	8 cut(s)	239, 455, 625, 700, 792, 856, 864, 1022
FaqI	GGGAC	1 cut(s)	197
FatI	CATG	8 cut(s)	235, 451, 621, 696, 788, 852, 860, 1018
Fnu4HI	GCNGC	3 cut(s)	73, 231, 813
FokI	GGATG	3 cut(s)	114, 314, 701
Fsp4HI	GCNGC	3 cut(s)	73, 231, 813
GluI	GCNGC	3 cut(s)	73, 231, 813
GsaI	CCCAGC	2 cut(s)	322, 955
HaeIII	GGCC	2 cut(s)	442, 1067
HapII	CCGG	2 cut(s)	64, 90
Hin1II	CATG	8 cut(s)	239, 455, 625, 700, 792, 856, 864, 1022
HincII	GTYRAC	1 cut(s)	436
HindII	GTYRAC	1 cut(s)	436
HindIII	AAGCTT	1 cut(s)	392
HinfI	GANTC	4 cut(s)	196, 349, 650, 660
HpaII	CCGG	2 cut(s)	64, 90
HphI	GGTGA	4 cut(s)	102, 179, 371, 415
Hpy166II	GTNNAC	1 cut(s)	436
Hpy188I	TCNGA	5 cut(s)	31, 201, 517, 757, 1078
Hpy188III	TCNNGA	3 cut(s)	367, 452, 807
Hpy8I	GTNNAC	1 cut(s)	436
Hpy99I	CGWCG	2 cut(s)	268, 373
HpyCH4III	ACNGT	5 cut(s)	114, 167, 310, 839, 1087
HpyCH4IV	ACGT	2 cut(s)	45, 1025
HpyF10VI	GCNNNNNNNGC	3 cut(s)	251, 374, 906
HpyF3I	CTNAG	3 cut(s)	516, 589, 805
HpySE526I	ACGT	2 cut(s)	45, 1025
Hsp92II	CATG	8 cut(s)	239, 455, 625, 700, 792, 856, 864, 1022
Kzo9I	GATC	4 cut(s)	363, 479, 532, 955
LmnI	GCTCC	6 cut(s)	66, 272, 590, 698, 809, 889
Lsp1109I	GCAGC	2 cut(s)	242, 799
LweI	GCATC	2 cut(s)	457, 1082
MaeII	ACGT	2 cut(s)	45, 1025
MaeIII	GTNAC	3 cut(s)	108, 358, 733
MalI	GATC	4 cut(s)	365, 481, 534, 957
MboI	GATC	4 cut(s)	363, 479, 532, 955
MboII	GAAGA	3 cut(s)	17, 418, 504
MflI	RGATCY	2 cut(s)	479, 532
MluCI	AATT	3 cut(s)	825, 847, 879
MlyI	GAGTC	1 cut(s)	343
MmeI	TCCRAC	1 cut(s)	454
Mph1103I	ATGCAT	1 cut(s)	779
MseI	TTAA	3 cut(s)	312, 537, 767
MslI	CAYNNNNRTG	1 cut(s)	1088
MspA1I	CMGCKG	1 cut(s)	947
MspI	CCGG	2 cut(s)	64, 90
MspR9I	CCNGG	5 cut(s)	293, 346, 723, 897, 1123
Mva1269I	GAATGC	1 cut(s)	379
MvaI	CCWGG	5 cut(s)	293, 346, 723, 897, 1123
MvnI	CGCG	1 cut(s)	368
MwoI	GCNNNNNNNGC	3 cut(s)	251, 374, 906
NcoI	CCATGG	1 cut(s)	852
NdeII	GATC	4 cut(s)	363, 479, 532, 955
NlaIII	CATG	8 cut(s)	239, 455, 625, 700, 792, 856, 864, 1022
NlaIV	GGNNCC	3 cut(s)	157, 586, 694
NmuCI	GTSAC	2 cut(s)	108, 358
NruI	TCGCGA	1 cut(s)	368
NsiI	ATGCAT	1 cut(s)	779
NspI	RCATGY	1 cut(s)	864
OliI	CACNNNNGTG	1 cut(s)	1088
PagI	TCATGA	1 cut(s)	451
PciI	ACATGT	1 cut(s)	860
PcsI	WCGNNNNNNNCGW	1 cut(s)	368
PctI	GAATGC	1 cut(s)	379
PfeI	GAWTC	3 cut(s)	196, 650, 660
PflMI	CCANNNNNTGG	1 cut(s)	702
PfoI	TCCNGGA	1 cut(s)	344
PkrI	GCNGC	3 cut(s)	74, 232, 814
Ple19I	CGATCG	1 cut(s)	366
PleI	GAGTC	1 cut(s)	343
PpsI	GAGTC	1 cut(s)	343
Ppu21I	YACGTR	1 cut(s)	46
PscI	ACATGT	1 cut(s)	860
Psp6I	CCWGG	5 cut(s)	291, 344, 721, 895, 1121
PspEI	GGTNACC	1 cut(s)	108
PspFI	CCCAGC	2 cut(s)	318, 951
PspGI	CCWGG	5 cut(s)	291, 344, 721, 895, 1121
PspN4I	GGNNCC	3 cut(s)	157, 586, 694
PspPI	GGNCC	1 cut(s)	440
PstI	CTGCAG	3 cut(s)	195, 547, 817
PstNI	CAGNNNCTG	1 cut(s)	812
PsuI	RGATCY	2 cut(s)	479, 532
PvuI	CGATCG	1 cut(s)	366
PvuII	CAGCTG	1 cut(s)	947
RruI	TCGCGA	1 cut(s)	368
RsaI	GTAC	4 cut(s)	44, 68, 859, 1013
RsaNI	GTAC	4 cut(s)	43, 67, 858, 1012
RseI	CAYNNNNRTG	1 cut(s)	1088
SaqAI	TTAA	3 cut(s)	312, 537, 767
SatI	GCNGC	3 cut(s)	73, 231, 813
Sau3AI	GATC	4 cut(s)	363, 479, 532, 955
Sau96I	GGNCC	1 cut(s)	440
SchI	GAGTC	1 cut(s)	343
ScrFI	CCNGG	5 cut(s)	293, 346, 723, 897, 1123
SfaNI	GCATC	2 cut(s)	457, 1082
SfcI	CTRYAG	4 cut(s)	191, 495, 543, 813
SmiMI	CAYNNNNRTG	1 cut(s)	1088
Sse9I	AATT	3 cut(s)	825, 847, 879
SsiI	CCGC	4 cut(s)	72, 75, 159, 175
SspI	AATATT	2 cut(s)	936, 1005
StyD4I	CCNGG	5 cut(s)	291, 344, 721, 895, 1121
StyI	CCWWGG	2 cut(s)	603, 852
TaaI	ACNGT	5 cut(s)	114, 167, 310, 839, 1087
TaiI	ACGT	2 cut(s)	48, 1028
TaqI	TCGA	2 cut(s)	266, 919
TasI	AATT	3 cut(s)	825, 847, 879
TauI	GCSGC	1 cut(s)	75
TfiI	GAWTC	3 cut(s)	196, 650, 660
Tru1I	TTAA	3 cut(s)	312, 537, 767
Tru9I	TTAA	3 cut(s)	312, 537, 767
TscAI	CASTG	2 cut(s)	157, 1092
TseFI	GTSAC	2 cut(s)	108, 358
TseI	GCWGC	2 cut(s)	230, 812
Tsp45I	GTSAC	2 cut(s)	108, 358
TspDTI	ATGAA	3 cut(s)	740, 777, 834
TspGWI	ACGGA	1 cut(s)	471
TspRI	CASTG	2 cut(s)	157, 1092
Van91I	CCANNNNNTGG	1 cut(s)	702
XceI	RCATGY	1 cut(s)	864
XcmI	CCANNNNNNNNNTGG	1 cut(s)	299
Zsp2I	ATGCAT	1 cut(s)	779

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.