Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0010152

Physical Location & Seq

Genomic Coordinates Forward (+)

41020252 .. 41021686

Gene Structure 1435 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG229600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGGGAAGTCTCGGCAGTGCACAGCTATCTTTTTCAGTAGCACTGCCATGGCGCCATCCGCCCCCACAGTCAAAATCCTCACTCCAAATCCAATGCGCTCTGACCAAACAAGGGCAACGCTTCCTGACCAAGCTCGCAGCCAATGCCGGCGACCCATCCGTCGCCAACAAATTGATCTCCAAGTTCCTGTCGAGCTCTCCCAAGTCCACTGCTCTCACCACTCTCTCTTATCTTCTCTCTCCTCACACCACCCACCCTCACCTCTCTTCCCTCGCCCTCCCCTTGTACTCGAAAATCACAGAGGCGTCTTGGTTTGAGTGGAATCCAAAGTTGGTAGCTGCCCTGGTTGCGTTGCTTGATAAACAAGGACGACACAGCCAATCAGAAGCTTTAATCTCCGAGACCATTTCGAAATTAGGCGCCAGAGAACGAGAGCTTGCTCAGTTTCATTGCCAATTGGTGGAGTCGCACTCTAAGTTAAGCTCAAAGCGTGGGTTTGATAGGGCCTATACCTACCTCTATCAGCTTCTTCAGAATTCTAGCTCTGTTTATGTAAAACGCCGAGCTTTTGAATCAATGGTTGGTGGTTTGTGTGCCATGGATAGGCCTCGTGAAGCGGACGATTTGATTGAGGAGATGAGAGTTAAGGGACTGAAGGCGTCGGTTTTCGAGTTCAGGTCTGTGGTTTATGGCTATGGAAGGTTGGGAATGTTTGAAGAAATGCTGAAGATTGTGGACCAAATGGAGAAGCAGGGGTTTGGTGATGATACTATTTGCTCTAACATGATTCTTTCATCATATGGAGCTCATAATGAGCTGGCTGCGATGGCAATGTGGCTTCGAAAAATGAAAGGATCGAGTGTTCCTTTCTCGATTAGGACTTACAATTCAGTGTTGAATTCGTGCCCTACGATTATGGCAATGCTGCAGGAACCGAAAGCTGTTCCGTGTTCAGTTGAAGAACTGACTGGGATTTTGGATGGTGATGAGGCTTTGGTGGTTAAAGAGTTGGTTGGATCGGCAGTTGTGGATGAGGCGATGATGTGGGATTCTACAGAGGCCAAGTTGGATTTGCATGGCATGCATTTGGGTTCAGCTTACTTGGTAATGCTAGAATGGTTTGAGGCAATGCGATGCAGGTTTGACTGTGGGGAATATGTGGTTCCAGCAGAGGTTGTCGTTGTTTGCGGATTGGGAAAGCATAGCAGTGTTAGAGGTGAATCCCCGGTTAAAGATCTGGTTAAAGAGATGATGCGTCGAATGGAAAGTCCGATGAGAATTGATAGGAAGAACGTGGGGTGTTTCATTGCCAAGGGAAGAGCTGTGAAGGACTGGTTATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

447

Amino Acids

49.66

Weight (kDa)

8.38

Isoelectric Point (pI)

39.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17033 AT2G17033 AT2G17033 AT2G17033
fragaria_vesca	FvH4_2g15760
malus_domestica	MD10G1129400.v1.1
prunus_persica	Prupe.8G170200_v2.0.a1
pyrus_communis	pycom05g12240
rosa_chinensis	RchiOBHm_Chr6g0279111
rosa_laevigata	RLG00000013167
rosa_multiflora	Rmu_co8289613.1_g000001 Rmu_sc0002080.1_g000001 Rmu_sc0014203.1_g000023
rosa_roxburghii	Rroxscaffold_7G00189120
rosa_rugosa	Rorug06G0122300
rosa_samantha	Rh6AG231000 Rh6BG235900 Rh6CG238000 Rh6DG229600
rosa_wichuraiana	Rw0G019940 Rw6G020230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	158
Acc36I	ACCTGC	1 cut(s)	1128
AccB1I	GGYRCC	2 cut(s)	51, 419
AccB7I	CCANNNNNTGG	1 cut(s)	460
AciI	CCGC	3 cut(s)	59, 617, 1188
AclWI	GGATC	2 cut(s)	862, 1024
AcsI	RAATTY	2 cut(s)	535, 898
AcuI	CTGAAG	3 cut(s)	515, 674, 746
AcyI	GRCGYC	4 cut(s)	52, 305, 420, 659
AfaI	GTAC	1 cut(s)	287
AfiI	CCNNNNNNNGG	3 cut(s)	111, 460, 603
AgsI	TTSAA	4 cut(s)	572, 716, 898, 959
AjnI	CCWGG	1 cut(s)	342
AjuI	GAANNNNNNNTTGG	4 cut(s)	314, 346, 564, 596
AloI	GAACNNNNNNTCC	2 cut(s)	846, 878
Alw21I	GWGCWC	3 cut(s)	22, 197, 808
Alw26I	GTCTC	2 cut(s)	14, 395
Alw44I	GTGCAC	1 cut(s)	18
AlwI	GGATC	2 cut(s)	862, 1024
AoxI	GGCC	3 cut(s)	504, 605, 1059
ApaLI	GTGCAC	1 cut(s)	18
ApeKI	GCWGC	4 cut(s)	137, 338, 821, 925
ApoI	RAATTY	2 cut(s)	535, 898
ArsI	GACNNNNNNTTYG	4 cut(s)	958, 990, 1252, 1284
AspLEI	GCGC	3 cut(s)	54, 98, 422
AspS9I	GGNCC	2 cut(s)	504, 736
AsuC2I	CCSGG	1 cut(s)	1226
AsuHPI	GGTGA	5 cut(s)	208, 251, 773, 995, 1229
AsuII	TTCGAA	2 cut(s)	410, 841
AvaII	GGWCC	1 cut(s)	736
BaeGI	GKGCMC	2 cut(s)	22, 908
BanI	GGYRCC	2 cut(s)	51, 419
BanII	GRGCYC	2 cut(s)	197, 808
BauI	CACGAG	1 cut(s)	609
Bbv12I	GWGCWC	3 cut(s)	22, 197, 808
BbvI	GCAGC	4 cut(s)	149, 325, 808, 912
BccI	CCATC	4 cut(s)	63, 163, 820, 974
BciT130I	CCWGG	1 cut(s)	344
BcnI	CCSGG	1 cut(s)	1226
BcoDI	GTCTC	2 cut(s)	14, 395
BfaI	CTAG	3 cut(s)	540, 1112, 1342
BfmI	CTRYAG	2 cut(s)	926, 1053
BfoI	RGCGCY	2 cut(s)	55, 423
BfuAI	ACCTGC	1 cut(s)	1128
BglII	AGATCT	1 cut(s)	1234
BisI	GCNGC	4 cut(s)	138, 339, 822, 926
BlsI	GCNGC	4 cut(s)	139, 340, 823, 927
Bme1390I	CCNGG	2 cut(s)	344, 1226
Bme18I	GGWCC	1 cut(s)	736
BmgT120I	GGNCC	2 cut(s)	504, 736
BmiI	GGNNCC	4 cut(s)	53, 421, 933, 1164
BmrFI	CCNGG	2 cut(s)	344, 1226
BmrI	ACTGGG	1 cut(s)	978
BmsI	GCATC	2 cut(s)	1124, 1242
BmuI	ACTGGG	1 cut(s)	978
BplI	GAGNNNNNCTC	2 cut(s)	455, 487
Bpu14I	TTCGAA	2 cut(s)	410, 841
BpuMI	CCSGG	1 cut(s)	1226
BsaHI	GRCGYC	4 cut(s)	52, 305, 420, 659
BsaI	GGTCTC	1 cut(s)	395
BsaJI	CCNNGG	5 cut(s)	47, 342, 597, 1224, 1311
Bsc4I	CCNNNNNNNGG	3 cut(s)	111, 460, 603
Bse118I	RCCGGY	1 cut(s)	146
Bse1I	ACTGG	2 cut(s)	973, 1337
Bse3DI	GCAATG	5 cut(s)	448, 837, 927, 1134, 1305
BseBI	CCWGG	1 cut(s)	344
BseDI	CCNNGG	5 cut(s)	47, 342, 597, 1224, 1311
BseGI	GGATG	4 cut(s)	55, 155, 985, 1036
BseLI	CCNNNNNNNGG	3 cut(s)	111, 460, 603
BseMI	GCAATG	5 cut(s)	448, 837, 927, 1134, 1305
BseMII	CTCAG	1 cut(s)	455
BseNI	ACTGG	2 cut(s)	973, 1337
BseRI	GAGGAG	2 cut(s)	231, 647
BseSI	GKGCMC	2 cut(s)	22, 908
BseXI	GCAGC	4 cut(s)	149, 325, 808, 912
BshFI	GGCC	3 cut(s)	506, 607, 1061
BshNI	GGYRCC	2 cut(s)	51, 419
BsiHKAI	GWGCWC	3 cut(s)	22, 197, 808
BsiSI	CCGG	2 cut(s)	147, 1226
BslFI	GGGAC	1 cut(s)	663
BslI	CCNNNNNNNGG	3 cut(s)	111, 460, 603
BsmAI	GTCTC	2 cut(s)	14, 395
BsmFI	GGGAC	1 cut(s)	663
BsnI	GGCC	3 cut(s)	506, 607, 1061
Bso31I	GGTCTC	1 cut(s)	395
Bsp119I	TTCGAA	2 cut(s)	410, 841
Bsp1286I	GDGCHC	4 cut(s)	22, 197, 808, 908
Bsp143I	GATC	4 cut(s)	174, 854, 1016, 1234
Bsp19I	CCATGG	2 cut(s)	47, 597
BspACI	CCGC	3 cut(s)	59, 617, 1188
BspANI	GGCC	3 cut(s)	506, 607, 1061
BspCNI	CTCAG	1 cut(s)	454
BspLI	GGNNCC	4 cut(s)	53, 421, 933, 1164
BspMAI	CTGCAG	1 cut(s)	930
BspMI	ACCTGC	1 cut(s)	1128
BspPI	GGATC	2 cut(s)	862, 1024
BspQI	GCTCTTC	1 cut(s)	1312
BspT104I	TTCGAA	2 cut(s)	410, 841
BspT107I	GGYRCC	2 cut(s)	51, 419
BspTNI	GGTCTC	1 cut(s)	395
BsrDI	GCAATG	5 cut(s)	448, 837, 927, 1134, 1305
BsrFI	RCCGGY	1 cut(s)	146
BsrI	ACTGG	2 cut(s)	973, 1337
BssAI	RCCGGY	1 cut(s)	146
BssECI	CCNNGG	5 cut(s)	47, 342, 597, 1224, 1311
BssMI	GATC	4 cut(s)	174, 854, 1016, 1234
BssNI	GRCGYC	4 cut(s)	52, 305, 420, 659
BssSI	CACGAG	1 cut(s)	609
BssT1I	CCWWGG	3 cut(s)	47, 597, 1311
Bst2BI	CACGAG	1 cut(s)	609
Bst2UI	CCWGG	1 cut(s)	344
Bst4CI	ACNGT	2 cut(s)	69, 1148
Bst6I	CTCTTC	2 cut(s)	271, 1312
BstACI	GRCGYC	4 cut(s)	52, 305, 420, 659
BstAPI	GCANNNNNTGC	2 cut(s)	143, 1081
BstBI	TTCGAA	2 cut(s)	410, 841
BstC8I	GCNNGC	5 cut(s)	135, 148, 438, 819, 1082
BstDEI	CTNAG	2 cut(s)	441, 474
BstDSI	CCRYGG	2 cut(s)	47, 597
BstF5I	GGATG	4 cut(s)	55, 155, 985, 1036
BstH2I	RGCGCY	2 cut(s)	55, 423
BstHHI	GCGC	3 cut(s)	54, 98, 422
BstKTI	GATC	4 cut(s)	177, 857, 1019, 1237
BstMAI	GTCTC	2 cut(s)	14, 395
BstMBI	GATC	4 cut(s)	174, 854, 1016, 1234
BstMWI	GCNNNNNNNGC	5 cut(s)	58, 143, 347, 827, 1081
BstNI	CCWGG	1 cut(s)	344
BstNSI	RCATGY	1 cut(s)	1084
BstSCI	CCNGG	2 cut(s)	342, 1224
BstSFI	CTRYAG	2 cut(s)	926, 1053
BstSLI	GKGCMC	2 cut(s)	22, 908
BstV1I	GCAGC	4 cut(s)	149, 325, 808, 912
BstX2I	RGATCY	1 cut(s)	1234
BstYI	RGATCY	1 cut(s)	1234
BsuRI	GGCC	3 cut(s)	506, 607, 1061
BtgI	CCRYGG	2 cut(s)	47, 597
BtgZI	GCGATG	3 cut(s)	839, 1052, 1147
BtsCI	GGATG	4 cut(s)	55, 155, 985, 1036
BtsI	GCAGTG	4 cut(s)	22, 41, 207, 1213
BtsIMutI	CAGTG	5 cut(s)	22, 41, 207, 897, 1213
BveI	ACCTGC	1 cut(s)	1128
Cac8I	GCNNGC	5 cut(s)	135, 148, 438, 819, 1082
CfoI	GCGC	3 cut(s)	54, 98, 422
Cfr10I	RCCGGY	1 cut(s)	146
Cfr13I	GGNCC	2 cut(s)	504, 736
CseI	GACGC	3 cut(s)	294, 648, 1244
Csp6I	GTAC	1 cut(s)	286
CviAII	CATG	5 cut(s)	48, 598, 784, 1076, 1081
CviQI	GTAC	1 cut(s)	286
DdeI	CTNAG	2 cut(s)	441, 474
DinI	GGCGCC	2 cut(s)	53, 421
DpnI	GATC	4 cut(s)	176, 856, 1018, 1236
DpnII	GATC	4 cut(s)	174, 854, 1016, 1234
DrdI	GACNNNNNNGTC	1 cut(s)	158
DseDI	GACNNNNNNGTC	1 cut(s)	158
Eam1104I	CTCTTC	2 cut(s)	271, 1312
EarI	CTCTTC	2 cut(s)	271, 1312
EciI	GGCGGA	1 cut(s)	48
Ecl136II	GAGCTC	2 cut(s)	195, 806
Eco130I	CCWWGG	3 cut(s)	47, 597, 1311
Eco147I	AGGCCT	1 cut(s)	607
Eco24I	GRGCYC	2 cut(s)	197, 808
Eco31I	GGTCTC	1 cut(s)	395
Eco47I	GGWCC	1 cut(s)	736
Eco53kI	GAGCTC	2 cut(s)	195, 806
Eco57I	CTGAAG	3 cut(s)	515, 674, 746
EcoICRI	GAGCTC	2 cut(s)	195, 806
EcoO109I	RGGNCCY	1 cut(s)	504
EcoRI	GAATTC	2 cut(s)	535, 898
EcoRII	CCWGG	1 cut(s)	342
EcoT14I	CCWWGG	3 cut(s)	47, 597, 1311
EcoT22I	ATGCAT	1 cut(s)	1086
EcoT38I	GRGCYC	2 cut(s)	197, 808
EgeI	GGCGCC	2 cut(s)	53, 421
EheI	GGCGCC	2 cut(s)	53, 421
ErhI	CCWWGG	3 cut(s)	47, 597, 1311
FaeI	CATG	5 cut(s)	51, 601, 787, 1079, 1084
FaqI	GGGAC	1 cut(s)	663
FatI	CATG	5 cut(s)	47, 597, 783, 1075, 1080
FauNDI	CATATG	1 cut(s)	799
Fnu4HI	GCNGC	4 cut(s)	138, 339, 822, 926
FokI	GGATG	4 cut(s)	42, 142, 992, 1043
FriOI	GRGCYC	2 cut(s)	197, 808
Fsp4HI	GCNGC	4 cut(s)	138, 339, 822, 926
FspBI	CTAG	3 cut(s)	540, 1112, 1342
GlaI	GCGC	3 cut(s)	53, 97, 421
GluI	GCNGC	4 cut(s)	138, 339, 822, 926
HaeII	RGCGCY	2 cut(s)	55, 423
HaeIII	GGCC	3 cut(s)	506, 607, 1061
HapII	CCGG	2 cut(s)	147, 1226
HgaI	GACGC	3 cut(s)	294, 648, 1244
HhaI	GCGC	3 cut(s)	54, 98, 422
Hin1I	GRCGYC	4 cut(s)	52, 305, 420, 659
Hin1II	CATG	5 cut(s)	51, 601, 787, 1079, 1084
Hin6I	GCGC	3 cut(s)	52, 96, 420
HinP1I	GCGC	3 cut(s)	52, 96, 420
HindIII	AAGCTT	1 cut(s)	387
HinfI	GANTC	6 cut(s)	322, 464, 572, 787, 1049, 1220
HpaII	CCGG	2 cut(s)	147, 1226
HphI	GGTGA	5 cut(s)	208, 251, 773, 995, 1229
Hpy166II	GTNNAC	3 cut(s)	20, 207, 736
Hpy188I	TCNGA	5 cut(s)	102, 385, 400, 534, 1272
Hpy188III	TCNNGA	3 cut(s)	124, 611, 871
Hpy8I	GTNNAC	3 cut(s)	20, 207, 736
Hpy99I	CGWCG	3 cut(s)	164, 664, 1260
HpyAV	CCTTC	3 cut(s)	649, 693, 1321
HpyCH4III	ACNGT	2 cut(s)	69, 1148
HpyCH4IV	ACGT	1 cut(s)	1293
HpyCH4V	TGCA	5 cut(s)	20, 928, 1075, 1084, 1137
HpyF10VI	GCNNNNNNNGC	5 cut(s)	58, 143, 347, 827, 1081
HpyF3I	CTNAG	2 cut(s)	441, 474
HpySE526I	ACGT	1 cut(s)	1293
Hsp92I	GRCGYC	4 cut(s)	52, 305, 420, 659
Hsp92II	CATG	5 cut(s)	51, 601, 787, 1079, 1084
HspAI	GCGC	3 cut(s)	52, 96, 420
KasI	GGCGCC	2 cut(s)	51, 419
KroI	GCCGGC	1 cut(s)	146
KroNI	GCCGGC	1 cut(s)	148
Kzo9I	GATC	4 cut(s)	174, 854, 1016, 1234
LguI	GCTCTTC	1 cut(s)	1312
LmnI	GCTCC	1 cut(s)	803
Lsp1109I	GCAGC	4 cut(s)	149, 325, 808, 912
LweI	GCATC	2 cut(s)	1124, 1242
MaeI	CTAG	3 cut(s)	540, 1112, 1342
MaeII	ACGT	1 cut(s)	1293
MalI	GATC	4 cut(s)	176, 856, 1018, 1236
MboI	GATC	4 cut(s)	174, 854, 1016, 1234
MboII	GAAGA	8 cut(s)	224, 258, 521, 728, 739, 971, 1300, 1329
MfeI	CAATTG	1 cut(s)	455
MflI	RGATCY	1 cut(s)	1234
MhlI	GDGCHC	4 cut(s)	22, 197, 808, 908
MluCI	AATT	7 cut(s)	170, 413, 455, 535, 886, 898, 1278
Mly113I	GGCGCC	2 cut(s)	52, 420
MlyI	GAGTC	1 cut(s)	473
MmeI	TCCRAC	2 cut(s)	994, 1047
Mph1103I	ATGCAT	1 cut(s)	1086
MroNI	GCCGGC	1 cut(s)	146
MseI	TTAA	6 cut(s)	392, 479, 645, 1002, 1230, 1242
MslI	CAYNNNNRTG	2 cut(s)	46, 1206
MspI	CCGG	2 cut(s)	147, 1226
MspR9I	CCNGG	2 cut(s)	344, 1226
MunI	CAATTG	1 cut(s)	455
MvaI	CCWGG	1 cut(s)	344
MwoI	GCNNNNNNNGC	5 cut(s)	58, 143, 347, 827, 1081
NaeI	GCCGGC	1 cut(s)	148
NarI	GGCGCC	2 cut(s)	52, 420
NciI	CCSGG	1 cut(s)	1226
NcoI	CCATGG	2 cut(s)	47, 597
NdeI	CATATG	1 cut(s)	799
NdeII	GATC	4 cut(s)	174, 854, 1016, 1234
NgoMIV	GCCGGC	1 cut(s)	146
NlaIII	CATG	5 cut(s)	51, 601, 787, 1079, 1084
NlaIV	GGNNCC	4 cut(s)	53, 421, 933, 1164
NmeAIII	GCCGAG	1 cut(s)	587
NsiI	ATGCAT	1 cut(s)	1086
NspI	RCATGY	1 cut(s)	1084
NspV	TTCGAA	2 cut(s)	410, 841
PaeI	GCATGC	1 cut(s)	1084
PceI	AGGCCT	1 cut(s)	607
PciSI	GCTCTTC	1 cut(s)	1312
PcsI	WCGNNNNNNNCGW	1 cut(s)	908
PdiI	GCCGGC	1 cut(s)	148
PfeI	GAWTC	5 cut(s)	322, 572, 787, 1049, 1220
PflMI	CCANNNNNTGG	1 cut(s)	460
PkrI	GCNGC	4 cut(s)	139, 340, 823, 927
PleI	GAGTC	1 cut(s)	472
PluTI	GGCGCC	2 cut(s)	55, 423
PpsI	GAGTC	1 cut(s)	472
Psp124BI	GAGCTC	2 cut(s)	197, 808
Psp6I	CCWGG	1 cut(s)	342
PspGI	CCWGG	1 cut(s)	342
PspN4I	GGNNCC	4 cut(s)	53, 421, 933, 1164
PspPI	GGNCC	2 cut(s)	504, 736
PstI	CTGCAG	1 cut(s)	930
PsuI	RGATCY	1 cut(s)	1234
RsaI	GTAC	1 cut(s)	287
RsaNI	GTAC	1 cut(s)	286
RseI	CAYNNNNRTG	2 cut(s)	46, 1206
SacI	GAGCTC	2 cut(s)	197, 808
SapI	GCTCTTC	1 cut(s)	1312
SaqAI	TTAA	6 cut(s)	392, 479, 645, 1002, 1230, 1242
SatI	GCNGC	4 cut(s)	138, 339, 822, 926
Sau3AI	GATC	4 cut(s)	174, 854, 1016, 1234
Sau96I	GGNCC	2 cut(s)	504, 736
SchI	GAGTC	1 cut(s)	473
ScrFI	CCNGG	2 cut(s)	344, 1226
SduI	GDGCHC	4 cut(s)	22, 197, 808, 908
SfaNI	GCATC	2 cut(s)	1124, 1242
SfcI	CTRYAG	2 cut(s)	926, 1053
SfoI	GGCGCC	2 cut(s)	53, 421
SfuI	TTCGAA	2 cut(s)	410, 841
SinI	GGWCC	1 cut(s)	736
SmiMI	CAYNNNNRTG	2 cut(s)	46, 1206
SphI	GCATGC	1 cut(s)	1084
Sse9I	AATT	7 cut(s)	170, 413, 455, 535, 886, 898, 1278
SseBI	AGGCCT	1 cut(s)	607
SsiI	CCGC	3 cut(s)	59, 617, 1188
SspDI	GGCGCC	2 cut(s)	51, 419
SspMI	CTAG	3 cut(s)	540, 1112, 1342
SstI	GAGCTC	2 cut(s)	197, 808
StuI	AGGCCT	1 cut(s)	607
StyD4I	CCNGG	2 cut(s)	342, 1224
StyI	CCWWGG	3 cut(s)	47, 597, 1311
TaaI	ACNGT	2 cut(s)	69, 1148
TaiI	ACGT	1 cut(s)	1296
TaqI	TCGA	8 cut(s)	191, 290, 410, 669, 841, 857, 872, 1258
TasI	AATT	7 cut(s)	170, 413, 455, 535, 886, 898, 1278
TatI	WGTACW	1 cut(s)	285
TfiI	GAWTC	5 cut(s)	322, 572, 787, 1049, 1220
Tru1I	TTAA	6 cut(s)	392, 479, 645, 1002, 1230, 1242
Tru9I	TTAA	6 cut(s)	392, 479, 645, 1002, 1230, 1242
TscAI	CASTG	5 cut(s)	22, 48, 214, 897, 1213
TseI	GCWGC	4 cut(s)	137, 338, 821, 925
TspDTI	ATGAA	4 cut(s)	437, 783, 863, 1294
TspGWI	ACGGA	2 cut(s)	148, 936
TspRI	CASTG	5 cut(s)	22, 48, 214, 897, 1213
Van91I	CCANNNNNTGG	1 cut(s)	460
VneI	GTGCAC	1 cut(s)	18
VpaK11BI	GGWCC	1 cut(s)	736
XapI	RAATTY	2 cut(s)	535, 898
XceI	RCATGY	1 cut(s)	1084
XspI	CTAG	3 cut(s)	540, 1112, 1342
Zsp2I	ATGCAT	1 cut(s)	1086

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.