Niemann-Pick C1
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0443141 RchiOBHm_Chr6g0284841 |
| rosa_laevigata | RLG00000008014 RLG00000012711 RLG00000034684 |
| rosa_roxburghii | Rroxscaffold_1G00068590 |
| rosa_rugosa | Rorug06G0167400 |
| rosa_samantha | Rh2AG448000 Rh3BG307600 Rh4BG390400 Rh4CG426100 Rh5BG126000 Rh6AG280100 Rh6BG280200 Rh6BG370100 Rh6CG282400 Rh6DG259200 Rh6DG275300 Rh6DG275500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 134 |
| AccI | GTMKAC | 1 cut(s) | 123 |
| AclWI | GGATC | 1 cut(s) | 111 |
| AcsI | RAATTY | 1 cut(s) | 110 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 26 |
| AgsI | TTSAA | 1 cut(s) | 155 |
| Alw26I | GTCTC | 1 cut(s) | 6 |
| AlwI | GGATC | 1 cut(s) | 111 |
| ApoI | RAATTY | 1 cut(s) | 110 |
| AspS9I | GGNCC | 1 cut(s) | 6 |
| AsuC2I | CCSGG | 1 cut(s) | 20 |
| AsuHPI | GGTGA | 1 cut(s) | 170 |
| AvaII | GGWCC | 1 cut(s) | 6 |
| BanI | GGYRCC | 1 cut(s) | 134 |
| BcnI | CCSGG | 1 cut(s) | 20 |
| BcoDI | GTCTC | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 1 cut(s) | 20 |
| Bme18I | GGWCC | 1 cut(s) | 6 |
| BmgT120I | GGNCC | 1 cut(s) | 6 |
| BmiI | GGNNCC | 1 cut(s) | 136 |
| BmrFI | CCNGG | 1 cut(s) | 20 |
| BpuMI | CCSGG | 1 cut(s) | 20 |
| BsaWI | WCCGGW | 1 cut(s) | 8 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 26 |
| Bse118I | RCCGGY | 1 cut(s) | 137 |
| BseGI | GGATG | 1 cut(s) | 109 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 26 |
| BseYI | CCCAGC | 1 cut(s) | 44 |
| BshNI | GGYRCC | 1 cut(s) | 134 |
| BsiSI | CCGG | 3 cut(s) | 9, 20, 138 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 26 |
| BsmAI | GTCTC | 1 cut(s) | 6 |
| Bsp143I | GATC | 1 cut(s) | 116 |
| BspLI | GGNNCC | 1 cut(s) | 136 |
| BspPI | GGATC | 1 cut(s) | 111 |
| BspT107I | GGYRCC | 1 cut(s) | 134 |
| BsrFI | RCCGGY | 1 cut(s) | 137 |
| BssAI | RCCGGY | 1 cut(s) | 137 |
| BssMI | GATC | 1 cut(s) | 116 |
| Bst4CI | ACNGT | 1 cut(s) | 40 |
| BstEII | GGTNACC | 1 cut(s) | 158 |
| BstF5I | GGATG | 1 cut(s) | 109 |
| BstKTI | GATC | 1 cut(s) | 119 |
| BstMAI | GTCTC | 1 cut(s) | 6 |
| BstMBI | GATC | 1 cut(s) | 116 |
| BstPI | GGTNACC | 1 cut(s) | 158 |
| BstSCI | CCNGG | 1 cut(s) | 18 |
| BtsCI | GGATG | 1 cut(s) | 109 |
| Cfr10I | RCCGGY | 1 cut(s) | 137 |
| Cfr13I | GGNCC | 1 cut(s) | 6 |
| CviJI | RGCY | 1 cut(s) | 44 |
| CviKI_1 | RGCY | 1 cut(s) | 44 |
| DpnI | GATC | 1 cut(s) | 118 |
| DpnII | GATC | 1 cut(s) | 116 |
| Eco47I | GGWCC | 1 cut(s) | 6 |
| Eco91I | GGTNACC | 1 cut(s) | 158 |
| EcoO65I | GGTNACC | 1 cut(s) | 158 |
| FaiI | YATR | 2 cut(s) | 35, 62 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 55, 87 |
| FblI | GTMKAC | 1 cut(s) | 123 |
| FokI | GGATG | 1 cut(s) | 116 |
| GsaI | CCCAGC | 1 cut(s) | 48 |
| HapII | CCGG | 3 cut(s) | 9, 20, 138 |
| HpaII | CCGG | 3 cut(s) | 9, 20, 138 |
| HphI | GGTGA | 1 cut(s) | 170 |
| Hpy166II | GTNNAC | 2 cut(s) | 6, 124 |
| Hpy188I | TCNGA | 1 cut(s) | 116 |
| Hpy8I | GTNNAC | 2 cut(s) | 6, 124 |
| HpyAV | CCTTC | 1 cut(s) | 149 |
| HpyCH4III | ACNGT | 1 cut(s) | 40 |
| HpyCH4V | TGCA | 1 cut(s) | 99 |
| Kzo9I | GATC | 1 cut(s) | 116 |
| LpnPI | CCDG | 5 cut(s) | 22, 30, 33, 109, 151 |
| MaeIII | GTNAC | 2 cut(s) | 65, 158 |
| MalI | GATC | 1 cut(s) | 118 |
| MboI | GATC | 1 cut(s) | 116 |
| MluCI | AATT | 2 cut(s) | 110, 168 |
| MseI | TTAA | 1 cut(s) | 108 |
| MspI | CCGG | 3 cut(s) | 9, 20, 138 |
| MspR9I | CCNGG | 1 cut(s) | 20 |
| NciI | CCSGG | 1 cut(s) | 20 |
| NdeII | GATC | 1 cut(s) | 116 |
| NlaIV | GGNNCC | 1 cut(s) | 136 |
| NmuCI | GTSAC | 2 cut(s) | 65, 158 |
| PspEI | GGTNACC | 1 cut(s) | 158 |
| PspFI | CCCAGC | 1 cut(s) | 44 |
| PspN4I | GGNNCC | 1 cut(s) | 136 |
| PspPI | GGNCC | 1 cut(s) | 6 |
| SaqAI | TTAA | 1 cut(s) | 108 |
| Sau3AI | GATC | 1 cut(s) | 116 |
| Sau96I | GGNCC | 1 cut(s) | 6 |
| ScrFI | CCNGG | 1 cut(s) | 20 |
| SetI | ASST | 3 cut(s) | 136, 160, 165 |
| SgeI | CNNG | 9 cut(s) | 21, 31, 32, 57, 92, 108, 112, 139, 150 |
| SinI | GGWCC | 1 cut(s) | 6 |
| Sse9I | AATT | 2 cut(s) | 110, 168 |
| StyD4I | CCNGG | 1 cut(s) | 18 |
| TaaI | ACNGT | 1 cut(s) | 40 |
| TasI | AATT | 2 cut(s) | 110, 168 |
| Tru1I | TTAA | 1 cut(s) | 108 |
| Tru9I | TTAA | 1 cut(s) | 108 |
| TseFI | GTSAC | 2 cut(s) | 65, 158 |
| Tsp45I | GTSAC | 2 cut(s) | 65, 158 |
| TspGWI | ACGGA | 1 cut(s) | 109 |
| VpaK11BI | GGWCC | 1 cut(s) | 6 |
| XapI | RAATTY | 1 cut(s) | 110 |
| XmiI | GTMKAC | 1 cut(s) | 123 |