No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.2G120900_v2.0.a1 |
| rosa_multiflora | Rmu_co8404669.1_g000001 Rmu_sc0000408.1_g000003 Rmu_sc0000953.1_g000019 Rmu_sc0001010.1_g000054 Rmu_sc0001753.1_g000027 Rmu_sc0003722.1_g000055 Rmu_sc0006460.1_g000015 Rmu_sc0007652.1_g000001 Rmu_sc0011579.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00131680 |
| rosa_samantha | Rh1BG331000 Rh1CG345100 Rh1DG362400 Rh2CG012500 Rh3DG360200 Rh4AG205800 Rh4DG228400 Rh5CG327900 Rh7AG067100 Rh7CG080800 Rh7DG081400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AjnI | CCWGG | 1 cut(s) | 191 |
| AluBI | AGCT | 1 cut(s) | 10 |
| AluI | AGCT | 1 cut(s) | 10 |
| Ama87I | CYCGRG | 1 cut(s) | 5 |
| AoxI | GGCC | 1 cut(s) | 176 |
| ApeKI | GCWGC | 2 cut(s) | 10, 89 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 173 |
| AspS9I | GGNCC | 1 cut(s) | 176 |
| AsuHPI | GGTGA | 1 cut(s) | 38 |
| AvaI | CYCGRG | 1 cut(s) | 5 |
| BbvI | GCAGC | 1 cut(s) | 101 |
| BccI | CCATC | 1 cut(s) | 131 |
| BciT130I | CCWGG | 1 cut(s) | 193 |
| BclI | TGATCA | 1 cut(s) | 40 |
| BisI | GCNGC | 2 cut(s) | 11, 90 |
| BlsI | GCNGC | 2 cut(s) | 12, 91 |
| Bme1390I | CCNGG | 1 cut(s) | 193 |
| BmeT110I | CYCGRG | 1 cut(s) | 5 |
| BmgT120I | GGNCC | 1 cut(s) | 176 |
| BmiI | GGNNCC | 1 cut(s) | 177 |
| BmrFI | CCNGG | 1 cut(s) | 193 |
| BpmI | CTGGAG | 1 cut(s) | 138 |
| BsaBI | GATNNNNATC | 1 cut(s) | 39 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 135, 165 |
| Bse8I | GATNNNNATC | 1 cut(s) | 39 |
| BseBI | CCWGG | 1 cut(s) | 193 |
| BseGI | GGATG | 1 cut(s) | 40 |
| BseJI | GATNNNNATC | 1 cut(s) | 39 |
| BseRI | GAGGAG | 2 cut(s) | 74, 95 |
| BseXI | GCAGC | 1 cut(s) | 101 |
| BseYI | CCCAGC | 1 cut(s) | 159 |
| BsgI | GTGCAG | 1 cut(s) | 108 |
| BshFI | GGCC | 1 cut(s) | 178 |
| BsiHKCI | CYCGRG | 1 cut(s) | 5 |
| BsnI | GGCC | 1 cut(s) | 178 |
| BsoBI | CYCGRG | 1 cut(s) | 5 |
| Bsp143I | GATC | 3 cut(s) | 40, 63, 93 |
| BspANI | GGCC | 1 cut(s) | 178 |
| BspLI | GGNNCC | 1 cut(s) | 177 |
| BssMI | GATC | 3 cut(s) | 40, 63, 93 |
| Bst2UI | CCWGG | 1 cut(s) | 193 |
| Bst4CI | ACNGT | 1 cut(s) | 26 |
| Bst6I | CTCTTC | 2 cut(s) | 24, 72 |
| BstF5I | GGATG | 1 cut(s) | 40 |
| BstKTI | GATC | 3 cut(s) | 43, 66, 96 |
| BstMBI | GATC | 3 cut(s) | 40, 63, 93 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 10, 165 |
| BstNI | CCWGG | 1 cut(s) | 193 |
| BstSCI | CCNGG | 1 cut(s) | 191 |
| BstV1I | GCAGC | 1 cut(s) | 101 |
| BsuRI | GGCC | 1 cut(s) | 178 |
| BtsCI | GGATG | 1 cut(s) | 40 |
| Cfr13I | GGNCC | 1 cut(s) | 176 |
| CseI | GACGC | 1 cut(s) | 177 |
| CviJI | RGCY | 3 cut(s) | 10, 116, 178 |
| CviKI_1 | RGCY | 3 cut(s) | 10, 116, 178 |
| DpnI | GATC | 3 cut(s) | 42, 65, 95 |
| DpnII | GATC | 3 cut(s) | 40, 63, 93 |
| Eam1104I | CTCTTC | 2 cut(s) | 24, 72 |
| EarI | CTCTTC | 2 cut(s) | 24, 72 |
| Eco88I | CYCGRG | 1 cut(s) | 5 |
| EcoRII | CCWGG | 1 cut(s) | 191 |
| FbaI | TGATCA | 1 cut(s) | 40 |
| Fnu4HI | GCNGC | 2 cut(s) | 11, 90 |
| FokI | GGATG | 1 cut(s) | 47 |
| Fsp4HI | GCNGC | 2 cut(s) | 11, 90 |
| GluI | GCNGC | 2 cut(s) | 11, 90 |
| GsaI | CCCAGC | 1 cut(s) | 163 |
| GsuI | CTGGAG | 1 cut(s) | 138 |
| HaeIII | GGCC | 1 cut(s) | 178 |
| HgaI | GACGC | 1 cut(s) | 177 |
| HinfI | GANTC | 1 cut(s) | 120 |
| HphI | GGTGA | 1 cut(s) | 38 |
| HpyCH4III | ACNGT | 1 cut(s) | 26 |
| HpyCH4V | TGCA | 2 cut(s) | 89, 168 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 10, 165 |
| Ksp22I | TGATCA | 1 cut(s) | 40 |
| Kzo9I | GATC | 3 cut(s) | 40, 63, 93 |
| LpnPI | CCDG | 3 cut(s) | 102, 145, 178 |
| Lsp1109I | GCAGC | 1 cut(s) | 101 |
| MalI | GATC | 3 cut(s) | 42, 65, 95 |
| MboI | GATC | 3 cut(s) | 40, 63, 93 |
| MboII | GAAGA | 3 cut(s) | 41, 89, 116 |
| MluCI | AATT | 1 cut(s) | 15 |
| MlyI | GAGTC | 1 cut(s) | 129 |
| MmeI | TCCRAC | 1 cut(s) | 34 |
| MnlI | CCTC | 4 cut(s) | 25, 52, 73, 166 |
| MspR9I | CCNGG | 1 cut(s) | 193 |
| MvaI | CCWGG | 1 cut(s) | 193 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 10, 165 |
| NdeII | GATC | 3 cut(s) | 40, 63, 93 |
| NlaIV | GGNNCC | 1 cut(s) | 177 |
| NmeAIII | GCCGAG | 1 cut(s) | 94 |
| PaeR7I | CTCGAG | 1 cut(s) | 5 |
| PkrI | GCNGC | 2 cut(s) | 12, 91 |
| PleI | GAGTC | 1 cut(s) | 128 |
| PpsI | GAGTC | 1 cut(s) | 128 |
| Psp6I | CCWGG | 1 cut(s) | 191 |
| PspFI | CCCAGC | 1 cut(s) | 159 |
| PspGI | CCWGG | 1 cut(s) | 191 |
| PspN4I | GGNNCC | 1 cut(s) | 177 |
| PspPI | GGNCC | 1 cut(s) | 176 |
| PspXI | VCTCGAGB | 1 cut(s) | 5 |
| SatI | GCNGC | 2 cut(s) | 11, 90 |
| Sau3AI | GATC | 3 cut(s) | 40, 63, 93 |
| Sau96I | GGNCC | 1 cut(s) | 176 |
| SchI | GAGTC | 1 cut(s) | 129 |
| ScrFI | CCNGG | 1 cut(s) | 193 |
| SetI | ASST | 3 cut(s) | 12, 153, 197 |
| Sfr274I | CTCGAG | 1 cut(s) | 5 |
| SgeI | CNNG | 7 cut(s) | 17, 19, 82, 86, 129, 172, 184 |
| SlaI | CTCGAG | 1 cut(s) | 5 |
| SmlI | CTYRAG | 1 cut(s) | 5 |
| SmoI | CTYRAG | 1 cut(s) | 5 |
| Sse9I | AATT | 1 cut(s) | 15 |
| StyD4I | CCNGG | 1 cut(s) | 191 |
| TaaI | ACNGT | 1 cut(s) | 26 |
| TaqI | TCGA | 2 cut(s) | 6, 123 |
| TasI | AATT | 1 cut(s) | 15 |
| TseI | GCWGC | 2 cut(s) | 10, 89 |
| XhoI | CTCGAG | 1 cut(s) | 5 |