Rh7AG260900
NAC Family

inactive shikimate kinase like 2

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
26701868 .. 26712221
10354 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG260900.1

Sequence Viewer

Length: 1272 bp
ATGAGCTTTTGGACCCGCGGGGCAAATGACAACCTCTGCCAACAGCCCCGTTCTATTCTTCTTGTAACGGCTCACTTTGAGTCCTCATCCTCGTCTTATCCAACTATCCCTGTTCAATTTCAAGCAGAAATGGCCGCTACCACCACCACTTCCACTGCTTTAATCAACACCTTGCAACCCTCTTCCCTTCAAAAGCTCTCAAGACCCAAATGGACAGTCACCAACCTTTCTCTCCCAACACCTCCGTCTCGCGTTTTGTTCGCAAATGGGTGCCGTTTAAAGACCCCCCTCACTCGTGTCTCCTCCTCTCAAAGTTTCCCCACCGTCCCCGTCACCGTCAAGGACTACGAGTTTCTTGATGGTTCTACTGAGGTGGAATTGAGATTACAGCTGGGGGGACGAAACATCACAAACTCCAGAGACATTTTTGTGGATGCAAATGGCTCCTCTTTAATAATAAAAGTACAGCACTCTGGGTCTTTTGTCACACTTATGGAAACTAATCAACTGTTTGAAAAAATAAAGCCTGCTGAAACAATATGGTATATAGATGAAGATCAGCTAGTAATAAACTTGAAGAAGCAGGATCCAGATTTGAAATGGCCTGACATTGTTGAGTCCTGGGAGTCTTTGACCGTTGGATCTATGCAACTTCTGAAAGCAACGTCAATTTACATTGTTGGCGATTCAACTGAAATCAACCAGAAAGTGGCTCAAGAACTTGCAGTTGGTCTTGGATATACACCACTCACTACGAAGGAGTTGCTGGAAGCATTTGCCAAGCAGAGTGTTGATTCATGGCTGCTTGCTGAAGGTTCTGAATCTGTAGTAGAAGCAGAAAGTGCTATATTAGAAAGTTTAAGTAGTCATGCTAGGGCAGTAATCGGTACATTAGGAGGCCAGCATGGAGCTGCTGGAAGAGCTCATAAATGGCGCCATCTTTATGCAGGATTTACTATCTGGCTGTCACAAACTGATGCTACAGATGAAGATTCTGCAAAGGAAGAGGCCAGGAGTCATATCCAAGATGGTAGAGTAGCTTACTCAAATGCAGACGTTGTTGTCAAGCTACAGGGTTGGGATGTAGATCATGTTAAAACTGTGGCTCAGGCATGCTTGAGTGCACTTAAACAATTAGTTCTGTCAGACAAGAAGCTTCCAGGTAAGAAGAGCCTCTACATACGCTTGGGATGCCGAGGTGACTGGCCAAACATCAAACCTCCTGGGTGGGATCCCTCAGCTGGAGATGATGCATCAGGTGGATTTCAATAA
Functional Annotation

Protein Analysis

423

Amino Acids

46.33

Weight (kDa)

5.69

Isoelectric Point (pI)

39.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1061
AccB1I GGYRCC 2 cut(s) 270, 933
AccB7I CCANNNNNTGG 1 cut(s) 709
AccII CGCG 2 cut(s) 18, 252
AciI CCGC 3 cut(s) 16, 18, 135
AclWI GGATC 5 cut(s) 581, 594, 649, 1226, 1239
AcoI YGGCCR 2 cut(s) 132, 1205
AcuI CTGAAG 1 cut(s) 831
AcyI GRCGYC 1 cut(s) 934
AfaI GTAC 2 cut(s) 465, 889
AfiI CCNNNNNNNGG 2 cut(s) 709, 1241
AgsI TTSAA 8 cut(s) 116, 122, 191, 515, 577, 598, 690, 1268
AjnI CCWGG 4 cut(s) 620, 1010, 1159, 1222
AjuI GAANNNNNNNTTGG 2 cut(s) 711, 743
Alw21I GWGCWC 2 cut(s) 925, 1126
Alw26I GTCTC 3 cut(s) 252, 304, 414
Alw44I GTGCAC 1 cut(s) 1122
AlwI GGATC 5 cut(s) 581, 594, 649, 1226, 1239
AoxI GGCC 5 cut(s) 132, 602, 898, 1008, 1205
ApaLI GTGCAC 1 cut(s) 1122
ApeKI GCWGC 2 cut(s) 802, 911
ArsI GACNNNNNNTTYG 2 cut(s) 201, 233
AspLEI GCGC 1 cut(s) 936
AspS9I GGNCC 1 cut(s) 12
AsuHPI GGTGA 3 cut(s) 211, 325, 1211
AvaII GGWCC 1 cut(s) 12
BaeGI GKGCMC 1 cut(s) 1126
BalI TGGCCA 1 cut(s) 1207
BamHI GGATCC 2 cut(s) 586, 1231
BanI GGYRCC 2 cut(s) 270, 933
BanII GRGCYC 1 cut(s) 925
BarI GAAGNNNNNNTAC 2 cut(s) 1160, 1192
BauI CACGAG 1 cut(s) 294
Bbv12I GWGCWC 2 cut(s) 925, 1126
BbvCI CCTCAGC 1 cut(s) 1237
BbvI GCAGC 2 cut(s) 789, 898
BccI CCATC 3 cut(s) 353, 945, 1022
BceAI ACGGC 2 cut(s) 84, 258
BcgI CGANNNNNNTGC 2 cut(s) 745, 779
BciT130I CCWGG 4 cut(s) 622, 1012, 1161, 1224
BcoDI GTCTC 3 cut(s) 252, 304, 414
BfaI CTAG 2 cut(s) 563, 873
BfmI CTRYAG 3 cut(s) 825, 981, 1070
BfoI RGCGCY 1 cut(s) 937
BisI GCNGC 3 cut(s) 135, 803, 912
BlsI GCNGC 3 cut(s) 136, 804, 913
Bme1390I CCNGG 4 cut(s) 622, 1012, 1161, 1224
Bme18I GGWCC 1 cut(s) 12
BmgT120I GGNCC 1 cut(s) 12
BmiI GGNNCC 6 cut(s) 14, 272, 445, 588, 935, 1233
BmrFI CCNGG 4 cut(s) 622, 1012, 1161, 1224
BmsI GCATC 5 cut(s) 424, 967, 1181, 1240, 1262
BpmI CTGGAG 2 cut(s) 400, 1263
Bpu10I CCTNAGC 2 cut(s) 1107, 1237
BpuEI CTTGAG 3 cut(s) 184, 699, 1138
BsaBI GATNNNNATC 2 cut(s) 555, 1086
BsaHI GRCGYC 1 cut(s) 934
BsaJI CCNNGG 4 cut(s) 16, 621, 1195, 1223
Bsc4I CCNNNNNNNGG 2 cut(s) 709, 1241
Bse1I ACTGG 1 cut(s) 1208
Bse8I GATNNNNATC 2 cut(s) 555, 1086
BseBI CCWGG 4 cut(s) 622, 1012, 1161, 1224
BseDI CCNNGG 4 cut(s) 16, 621, 1195, 1223
BseGI GGATG 4 cut(s) 86, 439, 1087, 1196
BseJI GATNNNNATC 2 cut(s) 555, 1086
BseLI CCNNNNNNNGG 2 cut(s) 709, 1241
BseMII CTCAG 3 cut(s) 360, 1121, 1251
BseNI ACTGG 1 cut(s) 1208
BseRI GAGGAG 3 cut(s) 292, 295, 436
BseSI GKGCMC 1 cut(s) 1126
BseXI GCAGC 2 cut(s) 789, 898
BseYI CCCAGC 1 cut(s) 391
Bsh1236I CGCG 2 cut(s) 18, 252
BshFI GGCC 5 cut(s) 134, 604, 900, 1010, 1207
BshNI GGYRCC 2 cut(s) 270, 933
BsiHKAI GWGCWC 2 cut(s) 925, 1126
BslFI GGGAC 2 cut(s) 311, 411
BslI CCNNNNNNNGG 2 cut(s) 709, 1241
BsmAI GTCTC 3 cut(s) 252, 304, 414
BsmBI CGTCTC 1 cut(s) 252
BsmFI GGGAC 2 cut(s) 311, 411
BsnI GGCC 5 cut(s) 134, 604, 900, 1010, 1207
Bsp1286I GDGCHC 2 cut(s) 925, 1126
Bsp143I GATC 5 cut(s) 556, 586, 641, 1087, 1231
BspACI CCGC 3 cut(s) 16, 18, 135
BspANI GGCC 5 cut(s) 134, 604, 900, 1010, 1207
BspCNI CTCAG 3 cut(s) 361, 1120, 1250
BspFNI CGCG 2 cut(s) 18, 252
BspLI GGNNCC 6 cut(s) 14, 272, 445, 588, 935, 1233
BspPI GGATC 5 cut(s) 581, 594, 649, 1226, 1239
BspQI GCTCTTC 2 cut(s) 913, 1163
BspT107I GGYRCC 2 cut(s) 270, 933
BsrI ACTGG 1 cut(s) 1208
BssECI CCNNGG 4 cut(s) 16, 621, 1195, 1223
BssMI GATC 5 cut(s) 556, 586, 641, 1087, 1231
BssNI GRCGYC 1 cut(s) 934
BssSI CACGAG 1 cut(s) 294
Bst2BI CACGAG 1 cut(s) 294
Bst2UI CCWGG 4 cut(s) 622, 1012, 1161, 1224
Bst4CI ACNGT 6 cut(s) 217, 325, 337, 510, 637, 1102
Bst6I CTCTTC 4 cut(s) 187, 913, 999, 1163
BstACI GRCGYC 1 cut(s) 934
BstAPI GCANNNNNTGC 1 cut(s) 842
BstC8I GCNNGC 4 cut(s) 528, 807, 902, 1114
BstDEI CTNAG 3 cut(s) 369, 1107, 1237
BstDSI CCRYGG 1 cut(s) 16
BstF5I GGATG 4 cut(s) 86, 439, 1087, 1196
BstFNI CGCG 2 cut(s) 18, 252
BstH2I RGCGCY 1 cut(s) 937
BstHHI GCGC 1 cut(s) 936
BstKTI GATC 5 cut(s) 559, 589, 644, 1090, 1234
BstMAI GTCTC 3 cut(s) 252, 304, 414
BstMBI GATC 5 cut(s) 556, 586, 641, 1087, 1231
BstMWI GCNNNNNNNGC 4 cut(s) 131, 842, 920, 1191
BstNI CCWGG 4 cut(s) 622, 1012, 1161, 1224
BstNSI RCATGY 1 cut(s) 1116
BstSCI CCNGG 4 cut(s) 620, 1010, 1159, 1222
BstSFI CTRYAG 3 cut(s) 825, 981, 1070
BstSLI GKGCMC 1 cut(s) 1126
BstUI CGCG 2 cut(s) 18, 252
BstV1I GCAGC 2 cut(s) 789, 898
BstX2I RGATCY 3 cut(s) 586, 641, 1231
BstYI RGATCY 3 cut(s) 586, 641, 1231
BsuRI GGCC 5 cut(s) 134, 604, 900, 1010, 1207
BtgI CCRYGG 1 cut(s) 16
BtsCI GGATG 4 cut(s) 86, 439, 1087, 1196
BtsI GCAGTG 1 cut(s) 153
BtsIMutI CAGTG 1 cut(s) 153
Cac8I GCNNGC 4 cut(s) 528, 807, 902, 1114
CfoI GCGC 1 cut(s) 936
Cfr13I GGNCC 1 cut(s) 12
Cfr42I CCGCGG 1 cut(s) 19
Csp6I GTAC 2 cut(s) 464, 888
CviAII CATG 5 cut(s) 798, 869, 905, 1091, 1113
CviQI GTAC 2 cut(s) 464, 888
DdeI CTNAG 3 cut(s) 369, 1107, 1237
DinI GGCGCC 1 cut(s) 935
DpnI GATC 5 cut(s) 558, 588, 643, 1089, 1233
DpnII GATC 5 cut(s) 556, 586, 641, 1087, 1231
DraI TTTAAA 1 cut(s) 279
DrdI GACNNNNNNGTC 1 cut(s) 1061
DseDI GACNNNNNNGTC 1 cut(s) 1061
EaeI YGGCCR 2 cut(s) 132, 1205
Eam1104I CTCTTC 4 cut(s) 187, 913, 999, 1163
EarI CTCTTC 4 cut(s) 187, 913, 999, 1163
Ecl136II GAGCTC 1 cut(s) 923
Eco24I GRGCYC 1 cut(s) 925
Eco47I GGWCC 1 cut(s) 12
Eco53kI GAGCTC 1 cut(s) 923
Eco57I CTGAAG 1 cut(s) 831
EcoICRI GAGCTC 1 cut(s) 923
EcoRII CCWGG 4 cut(s) 620, 1010, 1159, 1222
EcoT22I ATGCAT 1 cut(s) 1255
EcoT38I GRGCYC 1 cut(s) 925
EgeI GGCGCC 1 cut(s) 935
EheI GGCGCC 1 cut(s) 935
Esp3I CGTCTC 1 cut(s) 252
FaeI CATG 5 cut(s) 801, 872, 908, 1094, 1116
FaqI GGGAC 2 cut(s) 311, 411
FatI CATG 5 cut(s) 797, 868, 904, 1090, 1112
FauI CCCGC 2 cut(s) 11, 23
Fnu4HI GCNGC 3 cut(s) 135, 803, 912
FokI GGATG 4 cut(s) 73, 446, 1094, 1203
FriOI GRGCYC 1 cut(s) 925
Fsp4HI GCNGC 3 cut(s) 135, 803, 912
FspBI CTAG 2 cut(s) 563, 873
GlaI GCGC 1 cut(s) 935
GluI GCNGC 3 cut(s) 135, 803, 912
GsaI CCCAGC 1 cut(s) 395
GsuI CTGGAG 2 cut(s) 400, 1263
HaeII RGCGCY 1 cut(s) 937
HaeIII GGCC 5 cut(s) 134, 604, 900, 1010, 1207
HhaI GCGC 1 cut(s) 936
Hin1I GRCGYC 1 cut(s) 934
Hin1II CATG 5 cut(s) 801, 872, 908, 1094, 1116
Hin6I GCGC 1 cut(s) 934
HinP1I GCGC 1 cut(s) 934
HindIII AAGCTT 1 cut(s) 1154
HinfI GANTC 8 cut(s) 80, 617, 626, 686, 794, 821, 992, 1015
HphI GGTGA 3 cut(s) 211, 325, 1211
Hpy166II GTNNAC 1 cut(s) 1124
Hpy188I TCNGA 3 cut(s) 657, 820, 1147
Hpy188III TCNNGA 5 cut(s) 201, 356, 417, 590, 716
Hpy8I GTNNAC 1 cut(s) 1124
HpyAV CCTTC 3 cut(s) 197, 751, 806
HpyCH4III ACNGT 6 cut(s) 217, 325, 337, 510, 637, 1102
HpyCH4IV ACGT 2 cut(s) 665, 1056
HpyCH4V TGCA 9 cut(s) 175, 437, 649, 725, 947, 998, 1052, 1124, 1253
HpyF10VI GCNNNNNNNGC 4 cut(s) 131, 842, 920, 1191
HpyF3I CTNAG 3 cut(s) 369, 1107, 1237
HpySE526I ACGT 2 cut(s) 665, 1056
Hsp92I GRCGYC 1 cut(s) 934
Hsp92II CATG 5 cut(s) 801, 872, 908, 1094, 1116
HspAI GCGC 1 cut(s) 934
KasI GGCGCC 1 cut(s) 933
KspI CCGCGG 1 cut(s) 19
Kzo9I GATC 5 cut(s) 556, 586, 641, 1087, 1231
LguI GCTCTTC 2 cut(s) 913, 1163
LmnI GCTCC 2 cut(s) 449, 908
Lsp1109I GCAGC 2 cut(s) 789, 898
LweI GCATC 5 cut(s) 424, 967, 1181, 1240, 1262
MaeI CTAG 2 cut(s) 563, 873
MaeII ACGT 2 cut(s) 665, 1056
MaeIII GTNAC 6 cut(s) 64, 217, 331, 484, 966, 1199
MalI GATC 5 cut(s) 558, 588, 643, 1089, 1233
MboI GATC 5 cut(s) 556, 586, 641, 1087, 1231
MboII GAAGA 8 cut(s) 50, 174, 566, 589, 930, 1001, 1016, 1180
MflI RGATCY 3 cut(s) 586, 641, 1231
MhlI GDGCHC 2 cut(s) 925, 1126
MlsI TGGCCA 1 cut(s) 1207
MluCI AATT 4 cut(s) 116, 377, 669, 1133
MluNI TGGCCA 1 cut(s) 1207
Mly113I GGCGCC 1 cut(s) 934
MlyI GAGTC 4 cut(s) 89, 626, 635, 1024
MmeI TCCRAC 2 cut(s) 125, 619
Mox20I TGGCCA 1 cut(s) 1207
Mph1103I ATGCAT 1 cut(s) 1255
MscI TGGCCA 1 cut(s) 1207
MseI TTAA 6 cut(s) 161, 278, 452, 860, 1095, 1128
MslI CAYNNNNRTG 3 cut(s) 428, 491, 942
Msp20I TGGCCA 1 cut(s) 1207
MspA1I CMGCKG 3 cut(s) 18, 391, 1241
MspR9I CCNGG 4 cut(s) 622, 1012, 1161, 1224
MvaI CCWGG 4 cut(s) 622, 1012, 1161, 1224
MvnI CGCG 2 cut(s) 18, 252
MwoI GCNNNNNNNGC 4 cut(s) 131, 842, 920, 1191
NarI GGCGCC 1 cut(s) 934
NdeII GATC 5 cut(s) 556, 586, 641, 1087, 1231
NlaIII CATG 5 cut(s) 801, 872, 908, 1094, 1116
NlaIV GGNNCC 6 cut(s) 14, 272, 445, 588, 935, 1233
NmeAIII GCCGAG 1 cut(s) 1220
NmuCI GTSAC 5 cut(s) 217, 331, 484, 966, 1199
NsiI ATGCAT 1 cut(s) 1255
NspI RCATGY 1 cut(s) 1116
PaeI GCATGC 1 cut(s) 1116
PciSI GCTCTTC 2 cut(s) 913, 1163
PfeI GAWTC 4 cut(s) 686, 794, 821, 992
PflMI CCANNNNNTGG 1 cut(s) 709
PkrI GCNGC 3 cut(s) 136, 804, 913
PleI GAGTC 4 cut(s) 88, 625, 634, 1023
PluTI GGCGCC 1 cut(s) 937
PpsI GAGTC 4 cut(s) 88, 625, 634, 1023
Psp124BI GAGCTC 1 cut(s) 925
Psp6I CCWGG 4 cut(s) 620, 1010, 1159, 1222
PspFI CCCAGC 1 cut(s) 391
PspGI CCWGG 4 cut(s) 620, 1010, 1159, 1222
PspN4I GGNNCC 6 cut(s) 14, 272, 445, 588, 935, 1233
PspPI GGNCC 1 cut(s) 12
PsuI RGATCY 3 cut(s) 586, 641, 1231
PvuII CAGCTG 2 cut(s) 391, 1241
RsaI GTAC 2 cut(s) 465, 889
RsaNI GTAC 2 cut(s) 464, 888
RseI CAYNNNNRTG 3 cut(s) 428, 491, 942
SacI GAGCTC 1 cut(s) 925
SacII CCGCGG 1 cut(s) 19
SapI GCTCTTC 2 cut(s) 913, 1163
SaqAI TTAA 6 cut(s) 161, 278, 452, 860, 1095, 1128
SatI GCNGC 3 cut(s) 135, 803, 912
Sau3AI GATC 5 cut(s) 556, 586, 641, 1087, 1231
Sau96I GGNCC 1 cut(s) 12
SchI GAGTC 4 cut(s) 89, 626, 635, 1024
ScrFI CCNGG 4 cut(s) 622, 1012, 1161, 1224
SduI GDGCHC 2 cut(s) 925, 1126
SfaNI GCATC 5 cut(s) 424, 967, 1181, 1240, 1262
SfcI CTRYAG 3 cut(s) 825, 981, 1070
SfoI GGCGCC 1 cut(s) 935
Sfr303I CCGCGG 1 cut(s) 19
SgrBI CCGCGG 1 cut(s) 19
SinI GGWCC 1 cut(s) 12
SmiMI CAYNNNNRTG 3 cut(s) 428, 491, 942
SmlI CTYRAG 3 cut(s) 199, 714, 1117
SmoI CTYRAG 3 cut(s) 199, 714, 1117
SphI GCATGC 1 cut(s) 1116
Sse9I AATT 4 cut(s) 116, 377, 669, 1133
SsiI CCGC 3 cut(s) 16, 18, 135
SspDI GGCGCC 1 cut(s) 933
SspMI CTAG 2 cut(s) 563, 873
SstI GAGCTC 1 cut(s) 925
StyD4I CCNGG 4 cut(s) 620, 1010, 1159, 1222
TaaI ACNGT 6 cut(s) 217, 325, 337, 510, 637, 1102
TaiI ACGT 2 cut(s) 668, 1059
TasI AATT 4 cut(s) 116, 377, 669, 1133
TatI WGTACW 1 cut(s) 463
TauI GCSGC 1 cut(s) 137
TfiI GAWTC 4 cut(s) 686, 794, 821, 992
Tru1I TTAA 6 cut(s) 161, 278, 452, 860, 1095, 1128
Tru9I TTAA 6 cut(s) 161, 278, 452, 860, 1095, 1128
TscAI CASTG 1 cut(s) 160
TseFI GTSAC 5 cut(s) 217, 331, 484, 966, 1199
TseI GCWGC 2 cut(s) 802, 911
Tsp45I GTSAC 5 cut(s) 217, 331, 484, 966, 1199
TspDTI ATGAA 3 cut(s) 567, 786, 1002
TspGWI ACGGA 1 cut(s) 234
TspRI CASTG 1 cut(s) 160
Van91I CCANNNNNTGG 1 cut(s) 709
VneI GTGCAC 1 cut(s) 1122
VpaK11BI GGWCC 1 cut(s) 12
XceI RCATGY 1 cut(s) 1116
XcmI CCANNNNNNNNNTGG 1 cut(s) 597
XspI CTAG 2 cut(s) 563, 873
Zsp2I ATGCAT 1 cut(s) 1255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.