Synaptotagmin-3-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0370471 RchiOBHm_Chr2g0089841 RchiOBHm_Chr7g0237531 RchiOBHm_Chr7g0238251 |
| rosa_laevigata | RLG00000029666 |
| rosa_roxburghii | Rroxscaffold_3G00255990 Rroxscaffold_3G00261430 Rroxscaffold_3G00273570 Rroxscaffold_4G00295690 Rroxscaffold_5G00382900 Rroxscaffold_5G00383610 Rroxscaffold_6G00400840 Rroxscaffold_7G00164670 Rroxscaffold_7G00170930 Rroxscaffold_7G00202310 |
| rosa_samantha | Rh1CG051900 Rh1DG056100 Rh1DG057200 Rh5BG136700 Rh6BG044600 Rh7AG461600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 243 |
| AclWI | GGATC | 1 cut(s) | 472 |
| AcsI | RAATTY | 1 cut(s) | 204 |
| AfaI | GTAC | 1 cut(s) | 5 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 100, 101 |
| AgsI | TTSAA | 1 cut(s) | 388 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 167, 199 |
| AluBI | AGCT | 2 cut(s) | 76, 492 |
| AluI | AGCT | 2 cut(s) | 76, 492 |
| Alw26I | GTCTC | 2 cut(s) | 135, 316 |
| AlwI | GGATC | 1 cut(s) | 472 |
| AoxI | GGCC | 3 cut(s) | 224, 275, 358 |
| ApoI | RAATTY | 1 cut(s) | 204 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 323, 355 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 192 |
| AsuHPI | GGTGA | 1 cut(s) | 487 |
| BccI | CCATC | 3 cut(s) | 61, 334, 421 |
| BcoDI | GTCTC | 2 cut(s) | 135, 316 |
| BfaI | CTAG | 1 cut(s) | 414 |
| BmrI | ACTGGG | 1 cut(s) | 140 |
| BmsI | GCATC | 1 cut(s) | 139 |
| BmuI | ACTGGG | 1 cut(s) | 140 |
| BpmI | CTGGAG | 1 cut(s) | 191 |
| BpuEI | CTTGAG | 2 cut(s) | 62, 413 |
| BsaBI | GATNNNNATC | 1 cut(s) | 234 |
| BsaI | GGTCTC | 2 cut(s) | 135, 316 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 100, 101 |
| Bse1I | ACTGG | 3 cut(s) | 146, 174, 251 |
| Bse8I | GATNNNNATC | 1 cut(s) | 234 |
| BseGI | GGATG | 1 cut(s) | 438 |
| BseJI | GATNNNNATC | 1 cut(s) | 234 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 100, 101 |
| BseMII | CTCAG | 1 cut(s) | 498 |
| BseNI | ACTGG | 3 cut(s) | 146, 174, 251 |
| BseRI | GAGGAG | 1 cut(s) | 33 |
| Bsh1285I | CGRYCG | 1 cut(s) | 238 |
| BshFI | GGCC | 3 cut(s) | 226, 277, 360 |
| BsiEI | CGRYCG | 1 cut(s) | 238 |
| BslFI | GGGAC | 1 cut(s) | 498 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 100, 101 |
| BsmAI | GTCTC | 2 cut(s) | 135, 316 |
| BsmFI | GGGAC | 1 cut(s) | 498 |
| BsnI | GGCC | 3 cut(s) | 226, 277, 360 |
| Bso31I | GGTCTC | 2 cut(s) | 135, 316 |
| Bsp1407I | TGTACA | 1 cut(s) | 3 |
| Bsp143I | GATC | 2 cut(s) | 235, 477 |
| BspANI | GGCC | 3 cut(s) | 226, 277, 360 |
| BspCNI | CTCAG | 1 cut(s) | 499 |
| BspPI | GGATC | 1 cut(s) | 472 |
| BspTNI | GGTCTC | 2 cut(s) | 135, 316 |
| BsrGI | TGTACA | 1 cut(s) | 3 |
| BsrI | ACTGG | 3 cut(s) | 146, 174, 251 |
| BssMI | GATC | 2 cut(s) | 235, 477 |
| BstAUI | TGTACA | 1 cut(s) | 3 |
| BstC8I | GCNNGC | 1 cut(s) | 345 |
| BstDEI | CTNAG | 1 cut(s) | 507 |
| BstF5I | GGATG | 1 cut(s) | 438 |
| BstKTI | GATC | 2 cut(s) | 238, 480 |
| BstMAI | GTCTC | 2 cut(s) | 135, 316 |
| BstMBI | GATC | 2 cut(s) | 235, 477 |
| BstMCI | CGRYCG | 1 cut(s) | 238 |
| BsuRI | GGCC | 3 cut(s) | 226, 277, 360 |
| BtsCI | GGATG | 1 cut(s) | 438 |
| Cac8I | GCNNGC | 1 cut(s) | 345 |
| Csp6I | GTAC | 1 cut(s) | 4 |
| CviAII | CATG | 1 cut(s) | 164 |
| CviJI | RGCY | 9 cut(s) | 76, 157, 226, 250, 277, 347, 360, 492, 506 |
| CviKI_1 | RGCY | 9 cut(s) | 76, 157, 226, 250, 277, 347, 360, 492, 506 |
| CviQI | GTAC | 1 cut(s) | 4 |
| DdeI | CTNAG | 1 cut(s) | 507 |
| DpnI | GATC | 2 cut(s) | 237, 479 |
| DpnII | GATC | 2 cut(s) | 235, 477 |
| Eco31I | GGTCTC | 2 cut(s) | 135, 316 |
| Eco32I | GATATC | 1 cut(s) | 375 |
| EcoRV | GATATC | 1 cut(s) | 375 |
| FaeI | CATG | 1 cut(s) | 167 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 248, 280 |
| FaqI | GGGAC | 1 cut(s) | 498 |
| FatI | CATG | 1 cut(s) | 163 |
| FblI | GTMKAC | 1 cut(s) | 243 |
| FokI | GGATG | 1 cut(s) | 445 |
| FspBI | CTAG | 1 cut(s) | 414 |
| GsuI | CTGGAG | 1 cut(s) | 191 |
| HaeIII | GGCC | 3 cut(s) | 226, 277, 360 |
| Hin1II | CATG | 1 cut(s) | 167 |
| HinfI | GANTC | 2 cut(s) | 82, 511 |
| HphI | GGTGA | 1 cut(s) | 487 |
| Hpy166II | GTNNAC | 2 cut(s) | 60, 244 |
| Hpy188III | TCNNGA | 2 cut(s) | 79, 419 |
| Hpy8I | GTNNAC | 2 cut(s) | 60, 244 |
| HpyAV | CCTTC | 1 cut(s) | 394 |
| HpyCH4V | TGCA | 3 cut(s) | 37, 130, 463 |
| HpyF3I | CTNAG | 1 cut(s) | 507 |
| Hsp92II | CATG | 1 cut(s) | 167 |
| Kzo9I | GATC | 2 cut(s) | 235, 477 |
| LmnI | GCTCC | 1 cut(s) | 20 |
| LpnPI | CCDG | 5 cut(s) | 155, 159, 232, 240, 342 |
| LweI | GCATC | 1 cut(s) | 139 |
| MaeI | CTAG | 1 cut(s) | 414 |
| MaeIII | GTNAC | 1 cut(s) | 179 |
| MalI | GATC | 2 cut(s) | 237, 479 |
| MboI | GATC | 2 cut(s) | 235, 477 |
| MboII | GAAGA | 1 cut(s) | 200 |
| MluCI | AATT | 2 cut(s) | 38, 204 |
| MlyI | GAGTC | 2 cut(s) | 76, 520 |
| MnlI | CCTC | 7 cut(s) | 11, 25, 60, 358, 364, 466, 496 |
| MroXI | GAANNNNTTC | 1 cut(s) | 192 |
| MseI | TTAA | 1 cut(s) | 363 |
| NdeII | GATC | 2 cut(s) | 235, 477 |
| NlaIII | CATG | 1 cut(s) | 167 |
| PdmI | GAANNNNTTC | 1 cut(s) | 192 |
| Ple19I | CGATCG | 1 cut(s) | 238 |
| PleI | GAGTC | 2 cut(s) | 76, 519 |
| PpsI | GAGTC | 2 cut(s) | 76, 519 |
| PvuI | CGATCG | 1 cut(s) | 238 |
| RsaI | GTAC | 1 cut(s) | 5 |
| RsaNI | GTAC | 1 cut(s) | 4 |
| SaqAI | TTAA | 1 cut(s) | 363 |
| Sau3AI | GATC | 2 cut(s) | 235, 477 |
| SchI | GAGTC | 2 cut(s) | 76, 520 |
| SetI | ASST | 8 cut(s) | 36, 78, 285, 356, 386, 393, 477, 494 |
| SfaNI | GCATC | 1 cut(s) | 139 |
| SmlI | CTYRAG | 2 cut(s) | 77, 392 |
| SmoI | CTYRAG | 2 cut(s) | 77, 392 |
| Sse9I | AATT | 2 cut(s) | 38, 204 |
| SspMI | CTAG | 1 cut(s) | 414 |
| TaqI | TCGA | 1 cut(s) | 238 |
| TasI | AATT | 2 cut(s) | 38, 204 |
| TatI | WGTACW | 1 cut(s) | 3 |
| Tru1I | TTAA | 1 cut(s) | 363 |
| Tru9I | TTAA | 1 cut(s) | 363 |
| TspDTI | ATGAA | 1 cut(s) | 180 |
| XapI | RAATTY | 1 cut(s) | 204 |
| XmiI | GTMKAC | 1 cut(s) | 243 |
| XmnI | GAANNNNTTC | 1 cut(s) | 192 |
| XspI | CTAG | 1 cut(s) | 414 |