No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48120 AT3G48120 |
| fragaria_vesca | FvH4_5g16290 |
| malus_domestica | MD06G1182300.v1.1 MD14G1188300.v1.1 |
| prunus_persica | Prupe.5G180400_v2.0.a1 |
| pyrus_communis | pycom06g16120 |
| rosa_chinensis | RchiOBHm_Chr7g0179841 |
| rosa_laevigata | RLG00000005319 |
| rosa_multiflora | Rmu_sc0001754.1_g000002 Rmu_sc0004156.1_g000013 Rmu_sc0035735.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00273410 |
| rosa_rugosa | Rorug06G0428800 |
| rosa_samantha | Rh7AG028500 Rh7BG027500 Rh7BG027600 Rh7CG029400 Rh7DG028800 |
| rosa_wichuraiana | Rw7G002280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 11, 341 |
| AcsI | RAATTY | 1 cut(s) | 101 |
| AcuI | CTGAAG | 1 cut(s) | 168 |
| AfaI | GTAC | 1 cut(s) | 366 |
| AfeI | AGCGCT | 1 cut(s) | 162 |
| AgsI | TTSAA | 2 cut(s) | 101, 140 |
| AluBI | AGCT | 2 cut(s) | 186, 233 |
| AluI | AGCT | 2 cut(s) | 186, 233 |
| Alw26I | GTCTC | 1 cut(s) | 200 |
| Aor51HI | AGCGCT | 1 cut(s) | 162 |
| ApeKI | GCWGC | 3 cut(s) | 8, 158, 233 |
| ApoI | RAATTY | 1 cut(s) | 101 |
| AspLEI | GCGC | 1 cut(s) | 163 |
| BbsI | GAAGAC | 1 cut(s) | 156 |
| BbvI | GCAGC | 3 cut(s) | 20, 170, 220 |
| BccI | CCATC | 2 cut(s) | 77, 283 |
| BceAI | ACGGC | 1 cut(s) | 69 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 95, 129 |
| BcoDI | GTCTC | 1 cut(s) | 200 |
| BfaI | CTAG | 1 cut(s) | 122 |
| BfmI | CTRYAG | 1 cut(s) | 6 |
| BfoI | RGCGCY | 1 cut(s) | 164 |
| BisI | GCNGC | 4 cut(s) | 9, 159, 234, 341 |
| BlsI | GCNGC | 4 cut(s) | 10, 160, 235, 342 |
| BmsI | GCATC | 3 cut(s) | 103, 145, 269 |
| BpiI | GAAGAC | 1 cut(s) | 156 |
| BpuEI | CTTGAG | 1 cut(s) | 373 |
| Bse1I | ACTGG | 1 cut(s) | 329 |
| Bse3DI | GCAATG | 1 cut(s) | 255 |
| BseGI | GGATG | 3 cut(s) | 88, 223, 275 |
| BseMI | GCAATG | 1 cut(s) | 255 |
| BseMII | CTCAG | 1 cut(s) | 48 |
| BseNI | ACTGG | 1 cut(s) | 329 |
| BseXI | GCAGC | 3 cut(s) | 20, 170, 220 |
| BsmAI | GTCTC | 1 cut(s) | 200 |
| Bsp143I | GATC | 1 cut(s) | 394 |
| BspACI | CCGC | 2 cut(s) | 11, 341 |
| BspCNI | CTCAG | 1 cut(s) | 49 |
| BspHI | TCATGA | 1 cut(s) | 238 |
| BspMAI | CTGCAG | 1 cut(s) | 10 |
| BsrDI | GCAATG | 1 cut(s) | 255 |
| BsrI | ACTGG | 1 cut(s) | 329 |
| BssMI | GATC | 1 cut(s) | 394 |
| Bst4CI | ACNGT | 1 cut(s) | 293 |
| BstDEI | CTNAG | 1 cut(s) | 57 |
| BstF5I | GGATG | 3 cut(s) | 88, 223, 275 |
| BstH2I | RGCGCY | 1 cut(s) | 164 |
| BstHHI | GCGC | 1 cut(s) | 163 |
| BstKTI | GATC | 1 cut(s) | 397 |
| BstMAI | GTCTC | 1 cut(s) | 200 |
| BstMBI | GATC | 1 cut(s) | 394 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 53 |
| BstSFI | CTRYAG | 1 cut(s) | 6 |
| BstV1I | GCAGC | 3 cut(s) | 20, 170, 220 |
| BstV2I | GAAGAC | 1 cut(s) | 156 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 79 |
| BtsCI | GGATG | 3 cut(s) | 88, 223, 275 |
| BtsIMutI | CAGTG | 1 cut(s) | 298 |
| CciI | TCATGA | 1 cut(s) | 238 |
| CfoI | GCGC | 1 cut(s) | 163 |
| Csp6I | GTAC | 1 cut(s) | 365 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 395 |
| CviAII | CATG | 3 cut(s) | 79, 239, 387 |
| CviJI | RGCY | 6 cut(s) | 56, 186, 233, 274, 340, 348 |
| CviKI_1 | RGCY | 6 cut(s) | 56, 186, 233, 274, 340, 348 |
| CviQI | GTAC | 1 cut(s) | 365 |
| DdeI | CTNAG | 1 cut(s) | 57 |
| DpnI | GATC | 1 cut(s) | 396 |
| DpnII | GATC | 1 cut(s) | 394 |
| Eco47III | AGCGCT | 1 cut(s) | 162 |
| Eco57I | CTGAAG | 1 cut(s) | 168 |
| EcoRI | GAATTC | 1 cut(s) | 101 |
| FaeI | CATG | 3 cut(s) | 82, 242, 390 |
| FaiI | YATR | 6 cut(s) | 80, 176, 240, 284, 388, 401 |
| FatI | CATG | 3 cut(s) | 78, 238, 386 |
| Fnu4HI | GCNGC | 4 cut(s) | 9, 159, 234, 341 |
| FokI | GGATG | 3 cut(s) | 95, 230, 262 |
| Fsp4HI | GCNGC | 4 cut(s) | 9, 159, 234, 341 |
| FspBI | CTAG | 1 cut(s) | 122 |
| GlaI | GCGC | 1 cut(s) | 162 |
| GluI | GCNGC | 4 cut(s) | 9, 159, 234, 341 |
| HaeII | RGCGCY | 1 cut(s) | 164 |
| HhaI | GCGC | 1 cut(s) | 163 |
| Hin1II | CATG | 3 cut(s) | 82, 242, 390 |
| Hin6I | GCGC | 1 cut(s) | 161 |
| HinP1I | GCGC | 1 cut(s) | 161 |
| HindIII | AAGCTT | 1 cut(s) | 184 |
| HinfI | GANTC | 1 cut(s) | 225 |
| Hpy188I | TCNGA | 1 cut(s) | 265 |
| Hpy188III | TCNNGA | 2 cut(s) | 239, 352 |
| HpyAV | CCTTC | 2 cut(s) | 55, 355 |
| HpyCH4III | ACNGT | 1 cut(s) | 293 |
| HpyCH4V | TGCA | 3 cut(s) | 8, 158, 260 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 53 |
| HpyF3I | CTNAG | 1 cut(s) | 57 |
| Hsp92II | CATG | 3 cut(s) | 82, 242, 390 |
| HspAI | GCGC | 1 cut(s) | 161 |
| Kzo9I | GATC | 1 cut(s) | 394 |
| LmnI | GCTCC | 1 cut(s) | 121 |
| LpnPI | CCDG | 1 cut(s) | 310 |
| Lsp1109I | GCAGC | 3 cut(s) | 20, 170, 220 |
| LweI | GCATC | 3 cut(s) | 103, 145, 269 |
| MaeI | CTAG | 1 cut(s) | 122 |
| MalI | GATC | 1 cut(s) | 396 |
| MboI | GATC | 1 cut(s) | 394 |
| MboII | GAAGA | 2 cut(s) | 40, 161 |
| MfeI | CAATTG | 1 cut(s) | 412 |
| MluCI | AATT | 3 cut(s) | 101, 135, 412 |
| MmeI | TCCRAC | 1 cut(s) | 64 |
| MnlI | CCTC | 5 cut(s) | 124, 238, 289, 295, 359 |
| MspA1I | CMGCKG | 1 cut(s) | 11 |
| MunI | CAATTG | 1 cut(s) | 412 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 53 |
| NdeII | GATC | 1 cut(s) | 394 |
| NlaIII | CATG | 3 cut(s) | 82, 242, 390 |
| PagI | TCATGA | 1 cut(s) | 238 |
| PfeI | GAWTC | 1 cut(s) | 225 |
| PkrI | GCNGC | 4 cut(s) | 10, 160, 235, 342 |
| PstI | CTGCAG | 1 cut(s) | 10 |
| RsaI | GTAC | 1 cut(s) | 366 |
| RsaNI | GTAC | 1 cut(s) | 365 |
| SatI | GCNGC | 4 cut(s) | 9, 159, 234, 341 |
| Sau3AI | GATC | 1 cut(s) | 394 |
| SetI | ASST | 6 cut(s) | 188, 235, 300, 306, 366, 385 |
| SfaNI | GCATC | 3 cut(s) | 103, 145, 269 |
| SfcI | CTRYAG | 1 cut(s) | 6 |
| SmlI | CTYRAG | 1 cut(s) | 352 |
| SmoI | CTYRAG | 1 cut(s) | 352 |
| Sse9I | AATT | 3 cut(s) | 101, 135, 412 |
| SsiI | CCGC | 2 cut(s) | 11, 341 |
| SspMI | CTAG | 1 cut(s) | 122 |
| TaaI | ACNGT | 1 cut(s) | 293 |
| TaqI | TCGA | 1 cut(s) | 105 |
| TasI | AATT | 3 cut(s) | 101, 135, 412 |
| TauI | GCSGC | 1 cut(s) | 343 |
| TfiI | GAWTC | 1 cut(s) | 225 |
| TscAI | CASTG | 1 cut(s) | 298 |
| TseI | GCWGC | 3 cut(s) | 8, 158, 233 |
| TspDTI | ATGAA | 2 cut(s) | 47, 375 |
| TspRI | CASTG | 1 cut(s) | 298 |
| XapI | RAATTY | 1 cut(s) | 101 |
| XspI | CTAG | 1 cut(s) | 122 |