Thylakoidal processing peptidase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0136211 RchiOBHm_Chr5g0044941 RchiOBHm_Chr5g0063701 RchiOBHm_Chr7g0238341 |
| rosa_laevigata | RLG00000013631 |
| rosa_multiflora | Rmu_sc0009071.1_g000001 |
| rosa_rugosa | Rorug01G0294300 Rorug07G0312300 |
| rosa_samantha | Rh6BG089100 Rh6CG085300 Rh6CG093700 Rh7DG319400 Rh7DG478000 |
| rosa_wichuraiana | Rw1G006480 Rw4G004840 Rw7G031920 Rw7G037930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 26 |
| AcoI | YGGCCR | 1 cut(s) | 106 |
| AcsI | RAATTY | 2 cut(s) | 40, 150 |
| AcuI | CTGAAG | 1 cut(s) | 330 |
| AfaI | GTAC | 1 cut(s) | 120 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 115 |
| AgsI | TTSAA | 4 cut(s) | 13, 155, 300, 322 |
| AjnI | CCWGG | 1 cut(s) | 114 |
| AluBI | AGCT | 1 cut(s) | 351 |
| AluI | AGCT | 1 cut(s) | 351 |
| AoxI | GGCC | 1 cut(s) | 106 |
| ApoI | RAATTY | 2 cut(s) | 40, 150 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 260, 292 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 201 |
| AsuHPI | GGTGA | 2 cut(s) | 151, 158 |
| BanII | GRGCYC | 1 cut(s) | 115 |
| BccI | CCATC | 3 cut(s) | 226, 297, 344 |
| BceAI | ACGGC | 1 cut(s) | 354 |
| BciT130I | CCWGG | 1 cut(s) | 116 |
| BfmI | CTRYAG | 1 cut(s) | 271 |
| Bme1390I | CCNGG | 1 cut(s) | 116 |
| BmiI | GGNNCC | 3 cut(s) | 177, 198, 293 |
| BmrFI | CCNGG | 1 cut(s) | 116 |
| BsaJI | CCNNGG | 2 cut(s) | 103, 114 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 39, 69 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 115 |
| BseBI | CCWGG | 1 cut(s) | 116 |
| BseDI | CCNNGG | 2 cut(s) | 103, 114 |
| BseGI | GGATG | 1 cut(s) | 99 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 115 |
| BseRI | GAGGAG | 1 cut(s) | 47 |
| BshFI | GGCC | 1 cut(s) | 108 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 115 |
| BsnI | GGCC | 1 cut(s) | 108 |
| Bsp1286I | GDGCHC | 1 cut(s) | 115 |
| BspACI | CCGC | 1 cut(s) | 26 |
| BspANI | GGCC | 1 cut(s) | 108 |
| BspHI | TCATGA | 1 cut(s) | 265 |
| BspLI | GGNNCC | 3 cut(s) | 177, 198, 293 |
| BssECI | CCNNGG | 2 cut(s) | 103, 114 |
| BssT1I | CCWWGG | 1 cut(s) | 103 |
| Bst2UI | CCWGG | 1 cut(s) | 116 |
| Bst4CI | ACNGT | 2 cut(s) | 272, 377 |
| BstF5I | GGATG | 1 cut(s) | 99 |
| BstNI | CCWGG | 1 cut(s) | 116 |
| BstSCI | CCNGG | 1 cut(s) | 114 |
| BstSFI | CTRYAG | 1 cut(s) | 271 |
| BsuRI | GGCC | 1 cut(s) | 108 |
| BtsCI | GGATG | 1 cut(s) | 99 |
| CciI | TCATGA | 1 cut(s) | 265 |
| Csp6I | GTAC | 1 cut(s) | 119 |
| CviAII | CATG | 2 cut(s) | 122, 266 |
| CviJI | RGCY | 6 cut(s) | 108, 113, 178, 219, 351, 369 |
| CviKI_1 | RGCY | 6 cut(s) | 108, 113, 178, 219, 351, 369 |
| CviQI | GTAC | 1 cut(s) | 119 |
| EaeI | YGGCCR | 1 cut(s) | 106 |
| Eco130I | CCWWGG | 1 cut(s) | 103 |
| Eco24I | GRGCYC | 1 cut(s) | 115 |
| Eco57I | CTGAAG | 1 cut(s) | 330 |
| EcoRII | CCWGG | 1 cut(s) | 114 |
| EcoT14I | CCWWGG | 1 cut(s) | 103 |
| EcoT38I | GRGCYC | 1 cut(s) | 115 |
| ErhI | CCWWGG | 1 cut(s) | 103 |
| FaeI | CATG | 2 cut(s) | 125, 269 |
| FaiI | YATR | 5 cut(s) | 123, 170, 189, 222, 267 |
| FatI | CATG | 2 cut(s) | 121, 265 |
| FokI | GGATG | 1 cut(s) | 86 |
| FriOI | GRGCYC | 1 cut(s) | 115 |
| HaeIII | GGCC | 1 cut(s) | 108 |
| Hin1II | CATG | 2 cut(s) | 125, 269 |
| HinfI | GANTC | 1 cut(s) | 260 |
| HphI | GGTGA | 2 cut(s) | 151, 158 |
| Hpy188I | TCNGA | 1 cut(s) | 310 |
| Hpy188III | TCNNGA | 3 cut(s) | 212, 266, 300 |
| HpyAV | CCTTC | 3 cut(s) | 209, 305, 306 |
| HpyCH4III | ACNGT | 2 cut(s) | 272, 377 |
| HpyCH4V | TGCA | 1 cut(s) | 246 |
| Hsp92II | CATG | 2 cut(s) | 125, 269 |
| LmnI | GCTCC | 1 cut(s) | 175 |
| LpnPI | CCDG | 4 cut(s) | 80, 101, 128, 225 |
| MaeIII | GTNAC | 2 cut(s) | 356, 371 |
| MboII | GAAGA | 1 cut(s) | 327 |
| MhlI | GDGCHC | 1 cut(s) | 115 |
| MluCI | AATT | 7 cut(s) | 40, 131, 150, 163, 201, 253, 284 |
| MlyI | GAGTC | 1 cut(s) | 254 |
| MnlI | CCTC | 2 cut(s) | 68, 229 |
| MroXI | GAANNNNTTC | 1 cut(s) | 201 |
| MspR9I | CCNGG | 1 cut(s) | 116 |
| MvaI | CCWGG | 1 cut(s) | 116 |
| NlaIII | CATG | 2 cut(s) | 125, 269 |
| NlaIV | GGNNCC | 3 cut(s) | 177, 198, 293 |
| NmeAIII | GCCGAG | 1 cut(s) | 134 |
| NmuCI | GTSAC | 2 cut(s) | 356, 371 |
| PagI | TCATGA | 1 cut(s) | 265 |
| PdmI | GAANNNNTTC | 1 cut(s) | 201 |
| PleI | GAGTC | 1 cut(s) | 254 |
| PpsI | GAGTC | 1 cut(s) | 254 |
| Psp6I | CCWGG | 1 cut(s) | 114 |
| PspGI | CCWGG | 1 cut(s) | 114 |
| PspN4I | GGNNCC | 3 cut(s) | 177, 198, 293 |
| RsaI | GTAC | 1 cut(s) | 120 |
| RsaNI | GTAC | 1 cut(s) | 119 |
| SchI | GAGTC | 1 cut(s) | 254 |
| ScrFI | CCNGG | 1 cut(s) | 116 |
| SduI | GDGCHC | 1 cut(s) | 115 |
| SetI | ASST | 4 cut(s) | 18, 120, 188, 353 |
| SfcI | CTRYAG | 1 cut(s) | 271 |
| Sse9I | AATT | 7 cut(s) | 40, 131, 150, 163, 201, 253, 284 |
| SsiI | CCGC | 1 cut(s) | 26 |
| StyD4I | CCNGG | 1 cut(s) | 114 |
| StyI | CCWWGG | 1 cut(s) | 103 |
| TaaI | ACNGT | 2 cut(s) | 272, 377 |
| TasI | AATT | 7 cut(s) | 40, 131, 150, 163, 201, 253, 284 |
| TseFI | GTSAC | 2 cut(s) | 356, 371 |
| Tsp45I | GTSAC | 2 cut(s) | 356, 371 |
| TspDTI | ATGAA | 3 cut(s) | 174, 204, 316 |
| XapI | RAATTY | 2 cut(s) | 40, 150 |
| XmnI | GAANNNNTTC | 1 cut(s) | 201 |