AT1G02060

Pentacotripeptide-repeat region of PRORP

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0005468
Physical Location & Seq
Reverse (-)
360918 .. 363142
2225 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G02060.1

Sequence Viewer

Length: 2133 bp
ATGGTATCTTCTGTACCTAAACTCCATGCTTTGTTTGTCTCCAAGTCTCAACCAGTTCTCCGAGCCGCCAAAGTTACCAATGAAGAAAGGTCCACCAAATCAAAACTCGCCAGGTCCTTGGCCCGTGCCGTGAACTCTAACCCGTGGTCGGACGAACTCGAGTCTTCACTATCATCTCTTCATCCGTCCCAAACCATCTCCAGAACCACCGTTCTCCAAACCCTGCGTCTCATCAAGGTCCCTGCGGATGGTCTCCGGTTCTTTGACTGGGTTTCCAACAAGGGGTTTTCTCACAAAGAGCAGTCTTTCTTCCTCATGTTAGAGTTCCTCGGTCGAGCTCGCAATCTCAATGTGGCTCGCAATTTCTTGTTCTCCATCGAGAGAAGGTCTAATGGCTGCGTCAAGCTCCAGGATCGCTACTTCAACAGCTTGATTAGGAGCTACGGGAACGCTGGGCTCTTCCAGGAGTCAGTGAAGCTGTTCCAGACCATGAAGCAGATGGGCATCTCCCCTTCCGTTCTTACCTTCAACAGTCTTCTCTCCATTTTGCTCAAGCGTGGCAGAACTGGAATGGCCCATGACTTGTTCGACGAAATGCGTCGTACCTACGGGGTTACCCCAGACTCCTATACTTTCAATACATTGATAAATGGGTTTTGTAAGAACTCCATGGTCGATGAAGCCTTTAGGATTTTTAAGGATATGGAGCTGTATCATTGCAATCCTGACGTTGTTACATATAACACGATCATCGATGGGTTATGCAGAGCCGGCAAGGTCAAGATTGCACATAATGTTTTGAGTGGAATGTTGAAGAAAGCAACCGATGTGCATCCCAACGTTGTTAGTTACACTACTCTGGTGCGAGGCTATTGTATGAAGCAGGAAATTGATGAAGCAGTGCTTGTGTTTCATGACATGCTGAGTAGAGGGCTGAAACCCAATGCTGTTACTTACAATACTCTGATCAAGGGGCTCTCTGAGGCTCACAGATATGATGAGATCAAAGATATCTTGATTGGAGGGAACGACGCATTTACCACTTTCGCTCCAGATGCCTGCACTTTTAATATTTTGATCAAAGCCCACTGCGATGCTGGTCATTTGGATGCAGCGATGAAGGTGTTCCAAGAAATGCTGAATATGAAGTTGCATCCTGATTCAGCTTCTTATAGTGTTTTGATTCGTACTCTGTGCATGAGAAACGAATTTGATAGAGCTGAGACATTGTTCAATGAGTTATTTGAGAAGGAAGTATTGTTAGGTAAGGATGAATGCAAGCCTCTCGCTGCAGCTTATAACCCAATGTTTGAATACTTATGTGCCAATGGGAAAACAAAACAAGCGGAGAAAGTTTTCAGGCAGCTGATGAAAAGAGGAGTGCAAGATCCGCCCTCTTACAAGACTTTGATAACGGGTCACTGCAGAGAAGGTAAATTCAAGCCTGCTTATGAGCTGTTGGTTCTAATGCTCAGGCGGGAATTTGTACCTGATCTTGAAACTTACGAGTTATTGATTGATGGACTGTTGAAGATAGGTGAAGCTCTTCTTGCTCACGATACCCTACAAAGGATGCTAAGGAGCTCTTATCTTCCTGTTGCAACCACTTTCCATTCTGTACTTGCAGAACTTGCGAAAAGGAAATTTGCTAACGAGTCTTTCTGCTTGGTAACGCTAATGTTGGAAAAACGAATAAGACAGAACATTGATCTTTCAACGCAGGTTGTCAGATTGCTTTTTAGTAGTGCACAGAAAGAGAAGGCATTTCTGATTGTTAGGTTGCTTTATGATAACGGGTATTTGGTTAAGATGGAGGAATTACTTGGTTACCTCTGCGAGAATAGAAAACTACTTGATGCACATACACTTGTTCTGTTTTGTCTGGAAAAAAGTCAAATGGTAGATATCGACACATGCAACACGGTCATAGAAGGACTCTGTAAGCATAAGAGACACTCTGAAGCGTTTAGTTTGTACAATGAATTAGTAGAACTAGGAAACCACCAACAGCTTAGCTGCCACGTGGTTTTGAGGAATGCCTTAGAGGCTGCTGGAAAGTGGGAAGAACTTCAGTTTGTGTCAAAGAGGATGGCTACATTGAGAGAATCAGATGATTGCTCTGTATTAGAATGA

Protein Analysis

710

Amino Acids

80.83

Weight (kDa)

8.68

Isoelectric Point (pI)

37.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 141 - 181 8.7e-09 PPR repeat family
PPR_3 PF13812 141 - 183 1.7e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 171 - 221 7.9e-16 PPR repeat family
PPR_3 PF13812 195 - 252 1.1e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 204 - 236 3.1e-14 PPR repeat
PPR_2 PF13041 207 - 256 1.8e-19 PPR repeat family
PPR PF01535 210 - 236 2e-08 PPR repeat
PPR_long PF17177 224 - 326 1.2e-07 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 240 - 270 6.7e-13 PPR repeat
PPR_2 PF13041 242 - 274 1.5e-08 PPR repeat family
TPR_24 PF23276 256 - 379 4.1e-08 Fungal tetratrico peptide repeats
PPR_3 PF13812 274 - 324 1.3e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 277 - 307 9e-09 PPR repeat
PPR_2 PF13041 279 - 327 1.4e-17 PPR repeat family
PPR PF01535 282 - 312 3.7e-06 PPR repeat
PPR_1 PF12854 350 - 379 2.5e-10 PPR repeat
PPR_2 PF13041 351 - 399 1.6e-15 PPR repeat family
PPR PF01535 355 - 382 4.3e-06 PPR repeat
PPR_2 PF13041 466 - 511 3.1e-09 PPR repeat family
PPR_2 PF13041 635 - 666 1.6e-06 PPR repeat family
PPR PF01535 638 - 666 8.4e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1299
Acc36I ACCTGC 1 cut(s) 1711
AciI CCGC 5 cut(s) 66, 245, 1346, 1391, 1477
AclI AACGTT 1 cut(s) 840
AclWI GGATC 2 cut(s) 420, 1382
AcsI RAATTY 4 cut(s) 1208, 1436, 1481, 1643
AcuI CTGAAG 2 cut(s) 1980, 2054
AcvI CACGTG 1 cut(s) 2023
AfaI GTAC 6 cut(s) 15, 604, 1189, 1488, 1620, 1976
AfiI CCNNNNNNNGG 4 cut(s) 148, 248, 282, 1569
AjnI CCWGG 3 cut(s) 110, 408, 462
Alw21I GWGCWC 3 cut(s) 340, 1586, 1750
Alw26I GTCTC 6 cut(s) 43, 51, 233, 257, 1217, 1945
Alw44I GTGCAC 1 cut(s) 1746
AlwI GGATC 2 cut(s) 420, 1382
Ama87I CYCGRG 1 cut(s) 158
AoxI GGCC 2 cut(s) 120, 573
ApaLI GTGCAC 1 cut(s) 1746
ApeKI GCWGC 7 cut(s) 396, 1112, 1289, 1292, 1363, 2016, 2048
ApoI RAATTY 4 cut(s) 1208, 1436, 1481, 1643
ArsI GACNNNNNNTTYG 2 cut(s) 211, 243
Asp700I GAANNNNTTC 5 cut(s) 479, 1124, 1355, 1545, 2067
AspS9I GGNCC 5 cut(s) 90, 114, 121, 238, 574
AsuHPI GGTGA 1 cut(s) 1550
AvaI CYCGRG 1 cut(s) 158
AvaII GGWCC 3 cut(s) 90, 114, 238
BaeGI GKGCMC 1 cut(s) 1750
BanII GRGCYC 4 cut(s) 340, 459, 978, 1586
BbrPI CACGTG 1 cut(s) 2023
BbsI GAAGAC 2 cut(s) 156, 527
Bbv12I GWGCWC 3 cut(s) 340, 1586, 1750
BbvI GCAGC 7 cut(s) 383, 1124, 1276, 1304, 1375, 2003, 2035
BccI CCATC 8 cut(s) 203, 242, 383, 493, 749, 1514, 1804, 2083
BceAI ACGGC 1 cut(s) 113
BcgI CGANNNNNNTGC 2 cut(s) 1267, 1301
BciT130I CCWGG 3 cut(s) 112, 410, 464
BclI TGATCA 2 cut(s) 966, 1077
BcoDI GTCTC 6 cut(s) 43, 51, 233, 257, 1217, 1945
BfaI CTAG 1 cut(s) 1994
BfmI CTRYAG 2 cut(s) 1290, 1423
BfuAI ACCTGC 1 cut(s) 1711
BglI GCCNNNNNGGC 1 cut(s) 2045
BisI GCNGC 8 cut(s) 66, 397, 1113, 1290, 1293, 1364, 2017, 2049
BlpI GCTNAGC 1 cut(s) 2012
BlsI GCNGC 8 cut(s) 67, 398, 1114, 1291, 1294, 1365, 2018, 2050
Bme1390I CCNGG 3 cut(s) 112, 410, 464
Bme18I GGWCC 3 cut(s) 90, 114, 238
BmeT110I CYCGRG 1 cut(s) 158
BmgT120I GGNCC 5 cut(s) 90, 114, 121, 238, 574
BmiI GGNNCC 1 cut(s) 240
BmrFI CCNGG 3 cut(s) 112, 410, 464
BmrI ACTGGG 1 cut(s) 277
BmsI GCATC 8 cut(s) 513, 841, 1045, 1084, 1099, 1162, 1563, 1846
BmuI ACTGGG 1 cut(s) 277
BpiI GAAGAC 2 cut(s) 156, 527
BpmI CTGGAG 3 cut(s) 184, 392, 1035
Bpu10I CCTNAGC 2 cut(s) 1472, 1577
Bpu1102I GCTNAGC 1 cut(s) 2012
BpuEI CTTGAG 1 cut(s) 536
Bsa29I ATCGAT 1 cut(s) 753
BsaAI YACGTR 1 cut(s) 2023
BsaBI GATNNNNATC 2 cut(s) 503, 831
BsaI GGTCTC 1 cut(s) 257
BsaJI CCNNGG 4 cut(s) 117, 143, 328, 669
BsaWI WCCGGW 1 cut(s) 255
BsaXI ACNNNNNCTCC 6 cut(s) 6, 36, 42, 72, 1033, 1063
Bsc4I CCNNNNNNNGG 4 cut(s) 148, 248, 282, 1569
Bse118I RCCGGY 1 cut(s) 770
Bse1I ACTGG 3 cut(s) 53, 272, 571
Bse3DI GCAATG 1 cut(s) 715
Bse8I GATNNNNATC 2 cut(s) 503, 831
BseBI CCWGG 3 cut(s) 112, 410, 464
BseCI ATCGAT 1 cut(s) 753
BseDI CCNNGG 4 cut(s) 117, 143, 328, 669
BseGI GGATG 8 cut(s) 181, 253, 832, 1114, 1153, 1276, 1578, 2094
BseJI GATNNNNATC 2 cut(s) 503, 831
BseLI CCNNNNNNNGG 4 cut(s) 148, 248, 282, 1569
BseMI GCAATG 1 cut(s) 715
BseMII CTCAG 4 cut(s) 914, 972, 1212, 1486
BseNI ACTGG 3 cut(s) 53, 272, 571
BseRI GAGGAG 1 cut(s) 1392
BseSI GKGCMC 1 cut(s) 1750
BseXI GCAGC 7 cut(s) 383, 1124, 1276, 1304, 1375, 2003, 2035
BseYI CCCAGC 1 cut(s) 452
BsgI GTGCAG 1 cut(s) 1045
Bsh1285I CGRYCG 1 cut(s) 334
BshFI GGCC 2 cut(s) 122, 575
BshVI ATCGAT 1 cut(s) 753
BsiEI CGRYCG 1 cut(s) 334
BsiHKAI GWGCWC 3 cut(s) 340, 1586, 1750
BsiHKCI CYCGRG 1 cut(s) 158
BsiSI CCGG 2 cut(s) 256, 771
BslFI GGGAC 2 cut(s) 172, 224
BslI CCNNNNNNNGG 4 cut(s) 148, 248, 282, 1569
BsmAI GTCTC 6 cut(s) 43, 51, 233, 257, 1217, 1945
BsmBI CGTCTC 1 cut(s) 233
BsmFI GGGAC 2 cut(s) 172, 224
BsmI GAATGC 2 cut(s) 1280, 2041
BsnI GGCC 2 cut(s) 122, 575
Bso31I GGTCTC 1 cut(s) 257
BsoBI CYCGRG 1 cut(s) 158
Bsp1286I GDGCHC 5 cut(s) 340, 459, 978, 1586, 1750
Bsp1407I TGTACA 1 cut(s) 1974
Bsp143I GATC 8 cut(s) 412, 747, 966, 1002, 1077, 1387, 1492, 1708
Bsp1720I GCTNAGC 1 cut(s) 2012
Bsp19I CCATGG 1 cut(s) 669
BspACI CCGC 5 cut(s) 66, 245, 1346, 1391, 1477
BspANI GGCC 2 cut(s) 122, 575
BspCNI CTCAG 4 cut(s) 915, 973, 1213, 1485
BspDI ATCGAT 1 cut(s) 753
BspHI TCATGA 1 cut(s) 913
BspLI GGNNCC 1 cut(s) 240
BspMAI CTGCAG 2 cut(s) 1294, 1427
BspMI ACCTGC 1 cut(s) 1711
BspPI GGATC 2 cut(s) 420, 1382
BspQI GCTCTTC 2 cut(s) 464, 1551
BspTNI GGTCTC 1 cut(s) 257
BsrDI GCAATG 1 cut(s) 715
BsrFI RCCGGY 1 cut(s) 770
BsrGI TGTACA 1 cut(s) 1974
BsrI ACTGG 3 cut(s) 53, 272, 571
BssAI RCCGGY 1 cut(s) 770
BssECI CCNNGG 4 cut(s) 117, 143, 328, 669
BssMI GATC 8 cut(s) 412, 747, 966, 1002, 1077, 1387, 1492, 1708
BssT1I CCWWGG 2 cut(s) 117, 669
Bst2UI CCWGG 3 cut(s) 112, 410, 464
Bst4CI ACNGT 4 cut(s) 211, 533, 1527, 1924
Bst6I CTCTTC 3 cut(s) 183, 464, 1551
BstAPI GCANNNNNTGC 1 cut(s) 1631
BstAUI TGTACA 1 cut(s) 1974
BstBAI YACGTR 1 cut(s) 2023
BstC8I GCNNGC 6 cut(s) 340, 358, 772, 1060, 1280, 1446
BstDEI CTNAG 7 cut(s) 923, 981, 1221, 1472, 1577, 2012, 2041
BstDSI CCRYGG 2 cut(s) 143, 669
BstEII GGTNACC 2 cut(s) 613, 1826
BstF5I GGATG 8 cut(s) 181, 253, 832, 1114, 1153, 1276, 1578, 2094
BstKTI GATC 8 cut(s) 415, 750, 969, 1005, 1080, 1390, 1495, 1711
BstMAI GTCTC 6 cut(s) 43, 51, 233, 257, 1217, 1945
BstMBI GATC 8 cut(s) 412, 747, 966, 1002, 1077, 1387, 1492, 1708
BstMCI CGRYCG 1 cut(s) 334
BstMWI GCNNNNNNNGC 6 cut(s) 771, 1055, 1390, 1550, 1631, 2045
BstNI CCWGG 3 cut(s) 112, 410, 464
BstNSI RCATGY 2 cut(s) 922, 1917
BstPI GGTNACC 2 cut(s) 613, 1826
BstSCI CCNGG 3 cut(s) 110, 408, 462
BstSFI CTRYAG 2 cut(s) 1290, 1423
BstSLI GKGCMC 1 cut(s) 1750
BstV1I GCAGC 7 cut(s) 383, 1124, 1276, 1304, 1375, 2003, 2035
BstV2I GAAGAC 2 cut(s) 156, 527
BstX2I RGATCY 1 cut(s) 1387
BstXI CCANNNNNNTGG 1 cut(s) 118
BstYI RGATCY 1 cut(s) 1387
Bsu15I ATCGAT 1 cut(s) 753
BsuRI GGCC 2 cut(s) 122, 575
BsuTUI ATCGAT 1 cut(s) 753
BtgI CCRYGG 2 cut(s) 143, 669
BtgZI GCGATG 2 cut(s) 1107, 1130
BtsCI GGATG 8 cut(s) 181, 253, 832, 1114, 1153, 1276, 1578, 2094
BtsI GCAGTG 3 cut(s) 906, 1087, 1420
BtsIMutI CAGTG 4 cut(s) 477, 906, 1087, 1420
BveI ACCTGC 1 cut(s) 1711
Cac8I GCNNGC 6 cut(s) 340, 358, 772, 1060, 1280, 1446
CciI TCATGA 1 cut(s) 913
Cfr10I RCCGGY 1 cut(s) 770
Cfr13I GGNCC 5 cut(s) 90, 114, 121, 238, 574
ClaI ATCGAT 1 cut(s) 753
CseI GACGC 4 cut(s) 215, 388, 587, 1040
Csp6I GTAC 6 cut(s) 14, 603, 1188, 1487, 1619, 1975
CviAII CATG 9 cut(s) 26, 316, 490, 578, 670, 914, 919, 1198, 1914
CviQI GTAC 6 cut(s) 14, 603, 1188, 1487, 1619, 1975
DdeI CTNAG 7 cut(s) 923, 981, 1221, 1472, 1577, 2012, 2041
DpnI GATC 8 cut(s) 414, 749, 968, 1004, 1079, 1389, 1494, 1710
DpnII GATC 8 cut(s) 412, 747, 966, 1002, 1077, 1387, 1492, 1708
Eam1104I CTCTTC 3 cut(s) 183, 464, 1551
EarI CTCTTC 3 cut(s) 183, 464, 1551
EciI GGCGGA 1 cut(s) 1380
Ecl136II GAGCTC 2 cut(s) 338, 1584
Eco130I CCWWGG 2 cut(s) 117, 669
Eco24I GRGCYC 4 cut(s) 340, 459, 978, 1586
Eco31I GGTCTC 1 cut(s) 257
Eco32I GATATC 2 cut(s) 1012, 1906
Eco47I GGWCC 3 cut(s) 90, 114, 238
Eco53kI GAGCTC 2 cut(s) 338, 1584
Eco57I CTGAAG 2 cut(s) 1980, 2054
Eco72I CACGTG 1 cut(s) 2023
Eco88I CYCGRG 1 cut(s) 158
Eco91I GGTNACC 2 cut(s) 613, 1826
EcoICRI GAGCTC 2 cut(s) 338, 1584
EcoO109I RGGNCCY 2 cut(s) 114, 238
EcoO65I GGTNACC 2 cut(s) 613, 1826
EcoRII CCWGG 3 cut(s) 110, 408, 462
EcoRV GATATC 2 cut(s) 1012, 1906
EcoT14I CCWWGG 2 cut(s) 117, 669
EcoT38I GRGCYC 4 cut(s) 340, 459, 978, 1586
ErhI CCWWGG 2 cut(s) 117, 669
Esp3I CGTCTC 1 cut(s) 233
FaeI CATG 9 cut(s) 29, 319, 493, 581, 673, 917, 922, 1201, 1917
FalI AAGNNNNNCTT 6 cut(s) 888, 920, 1533, 1565, 1570, 1602
FaqI GGGAC 2 cut(s) 172, 224
FatI CATG 9 cut(s) 25, 315, 489, 577, 669, 913, 918, 1197, 1913
FauI CCCGC 1 cut(s) 1470
FbaI TGATCA 2 cut(s) 966, 1077
Fnu4HI GCNGC 8 cut(s) 66, 397, 1113, 1290, 1293, 1364, 2017, 2049
FokI GGATG 8 cut(s) 168, 260, 819, 1121, 1140, 1283, 1585, 2101
FriOI GRGCYC 4 cut(s) 340, 459, 978, 1586
Fsp4HI GCNGC 8 cut(s) 66, 397, 1113, 1290, 1293, 1364, 2017, 2049
FspBI CTAG 1 cut(s) 1994
GluI GCNGC 8 cut(s) 66, 397, 1113, 1290, 1293, 1364, 2017, 2049
GsaI CCCAGC 1 cut(s) 456
GsuI CTGGAG 3 cut(s) 184, 392, 1035
HaeIII GGCC 2 cut(s) 122, 575
HapII CCGG 2 cut(s) 256, 771
HgaI GACGC 4 cut(s) 215, 388, 587, 1040
Hin1II CATG 9 cut(s) 29, 319, 493, 581, 673, 917, 922, 1201, 1917
HinfI GANTC 8 cut(s) 161, 467, 623, 1160, 1183, 1655, 1935, 2105
HpaII CCGG 2 cut(s) 256, 771
HphI GGTGA 1 cut(s) 1550
Hpy166II GTNNAC 3 cut(s) 93, 133, 1748
Hpy188I TCNGA 8 cut(s) 62, 151, 966, 982, 1730, 1770, 1960, 2110
Hpy8I GTNNAC 3 cut(s) 93, 133, 1748
Hpy99I CGWCG 3 cut(s) 593, 603, 1034
HpyAV CCTTC 8 cut(s) 378, 522, 535, 1114, 1243, 1424, 1753, 1925
HpyCH4III ACNGT 4 cut(s) 211, 533, 1527, 1924
HpyCH4IV ACGT 3 cut(s) 729, 840, 2022
HpyF10VI GCNNNNNNNGC 6 cut(s) 771, 1055, 1390, 1550, 1631, 2045
HpyF3I CTNAG 7 cut(s) 923, 981, 1221, 1472, 1577, 2012, 2041
HpySE526I ACGT 3 cut(s) 729, 840, 2022
Hsp92II CATG 9 cut(s) 29, 319, 493, 581, 673, 917, 922, 1201, 1917
KroI GCCGGC 1 cut(s) 770
KroNI GCCGGC 1 cut(s) 772
Ksp22I TGATCA 2 cut(s) 966, 1077
Kzo9I GATC 8 cut(s) 412, 747, 966, 1002, 1077, 1387, 1492, 1708
LguI GCTCTTC 2 cut(s) 464, 1551
LmnI GCTCC 5 cut(s) 411, 438, 706, 1054, 1581
Lsp1109I GCAGC 7 cut(s) 383, 1124, 1276, 1304, 1375, 2003, 2035
LweI GCATC 8 cut(s) 513, 841, 1045, 1084, 1099, 1162, 1563, 1846
MaeI CTAG 1 cut(s) 1994
MaeII ACGT 3 cut(s) 729, 840, 2022
MaeIII GTNAC 8 cut(s) 73, 613, 733, 848, 949, 1418, 1669, 1826
MalI GATC 8 cut(s) 414, 749, 968, 1004, 1079, 1389, 1494, 1710
MboI GATC 8 cut(s) 412, 747, 966, 1002, 1077, 1387, 1492, 1708
MflI RGATCY 1 cut(s) 1387
MhlI GDGCHC 5 cut(s) 340, 459, 978, 1586, 1750
MluCI AATT 8 cut(s) 361, 888, 1208, 1436, 1481, 1643, 1817, 1982
MlyI GAGTC 5 cut(s) 170, 476, 617, 1664, 1929
MmeI TCCRAC 3 cut(s) 129, 300, 1662
MroNI GCCGGC 1 cut(s) 770
MroXI GAANNNNTTC 5 cut(s) 479, 1124, 1355, 1545, 2067
MseI TTAA 3 cut(s) 696, 1068, 1806
MslI CAYNNNNRTG 3 cut(s) 993, 1092, 1107
MspA1I CMGCKG 1 cut(s) 1366
MspI CCGG 2 cut(s) 256, 771
MspR9I CCNGG 3 cut(s) 112, 410, 464
Mva1269I GAATGC 2 cut(s) 1280, 2041
MvaI CCWGG 3 cut(s) 112, 410, 464
MwoI GCNNNNNNNGC 6 cut(s) 771, 1055, 1390, 1550, 1631, 2045
NaeI GCCGGC 1 cut(s) 772
NcoI CCATGG 1 cut(s) 669
NdeII GATC 8 cut(s) 412, 747, 966, 1002, 1077, 1387, 1492, 1708
NgoMIV GCCGGC 1 cut(s) 770
NlaIII CATG 9 cut(s) 29, 319, 493, 581, 673, 917, 922, 1201, 1917
NlaIV GGNNCC 1 cut(s) 240
NmuCI GTSAC 1 cut(s) 1418
NspI RCATGY 2 cut(s) 922, 1917
PaeR7I CTCGAG 1 cut(s) 158
PagI TCATGA 1 cut(s) 913
PciSI GCTCTTC 2 cut(s) 464, 1551
PctI GAATGC 2 cut(s) 1280, 2041
PdiI GCCGGC 1 cut(s) 772
PdmI GAANNNNTTC 5 cut(s) 479, 1124, 1355, 1545, 2067
PfeI GAWTC 3 cut(s) 1160, 1183, 2105
PfoI TCCNGGA 2 cut(s) 408, 462
PkrI GCNGC 8 cut(s) 67, 398, 1114, 1291, 1294, 1365, 2018, 2050
PleI GAGTC 5 cut(s) 169, 475, 617, 1663, 1929
PmaCI CACGTG 1 cut(s) 2023
PmlI CACGTG 1 cut(s) 2023
PpsI GAGTC 5 cut(s) 169, 475, 617, 1663, 1929
Ppu21I YACGTR 1 cut(s) 2023
PpuMI RGGWCCY 2 cut(s) 114, 238
PsiI TTATAA 1 cut(s) 1299
Psp124BI GAGCTC 2 cut(s) 340, 1586
Psp1406I AACGTT 1 cut(s) 840
Psp5II RGGWCCY 2 cut(s) 114, 238
Psp6I CCWGG 3 cut(s) 110, 408, 462
PspCI CACGTG 1 cut(s) 2023
PspEI GGTNACC 2 cut(s) 613, 1826
PspFI CCCAGC 1 cut(s) 452
PspGI CCWGG 3 cut(s) 110, 408, 462
PspN4I GGNNCC 1 cut(s) 240
PspPI GGNCC 5 cut(s) 90, 114, 121, 238, 574
PspPPI RGGWCCY 2 cut(s) 114, 238
PspXI VCTCGAGB 1 cut(s) 158
PstI CTGCAG 2 cut(s) 1294, 1427
PsuI RGATCY 1 cut(s) 1387
PvuII CAGCTG 1 cut(s) 1366
RsaI GTAC 6 cut(s) 15, 604, 1189, 1488, 1620, 1976
RsaNI GTAC 6 cut(s) 14, 603, 1188, 1487, 1619, 1975
RseI CAYNNNNRTG 3 cut(s) 993, 1092, 1107
SacI GAGCTC 2 cut(s) 340, 1586
SapI GCTCTTC 2 cut(s) 464, 1551
SaqAI TTAA 3 cut(s) 696, 1068, 1806
SatI GCNGC 8 cut(s) 66, 397, 1113, 1290, 1293, 1364, 2017, 2049
Sau3AI GATC 8 cut(s) 412, 747, 966, 1002, 1077, 1387, 1492, 1708
Sau96I GGNCC 5 cut(s) 90, 114, 121, 238, 574
SchI GAGTC 5 cut(s) 170, 476, 617, 1664, 1929
ScrFI CCNGG 3 cut(s) 112, 410, 464
SduI GDGCHC 5 cut(s) 340, 459, 978, 1586, 1750
SfaNI GCATC 8 cut(s) 513, 841, 1045, 1084, 1099, 1162, 1563, 1846
SfcI CTRYAG 2 cut(s) 1290, 1423
Sfr274I CTCGAG 1 cut(s) 158
SinI GGWCC 3 cut(s) 90, 114, 238
SlaI CTCGAG 1 cut(s) 158
SmiMI CAYNNNNRTG 3 cut(s) 993, 1092, 1107
SmlI CTYRAG 2 cut(s) 158, 551
SmoI CTYRAG 2 cut(s) 158, 551
Sse9I AATT 8 cut(s) 361, 888, 1208, 1436, 1481, 1643, 1817, 1982
SsiI CCGC 5 cut(s) 66, 245, 1346, 1391, 1477
SspI AATATT 1 cut(s) 1072
SspMI CTAG 1 cut(s) 1994
SstI GAGCTC 2 cut(s) 340, 1586
StyD4I CCNGG 3 cut(s) 110, 408, 462
StyI CCWWGG 2 cut(s) 117, 669
TaaI ACNGT 4 cut(s) 211, 533, 1527, 1924
TaiI ACGT 3 cut(s) 732, 843, 2025
TaqI TCGA 7 cut(s) 159, 334, 378, 588, 675, 753, 1908
TaqII GACCGA 1 cut(s) 320
TasI AATT 8 cut(s) 361, 888, 1208, 1436, 1481, 1643, 1817, 1982
TatI WGTACW 2 cut(s) 1618, 1974
TauI GCSGC 1 cut(s) 68
TfiI GAWTC 3 cut(s) 1160, 1183, 2105
Tru1I TTAA 3 cut(s) 696, 1068, 1806
Tru9I TTAA 3 cut(s) 696, 1068, 1806
TscAI CASTG 4 cut(s) 477, 906, 1094, 1427
TseFI GTSAC 1 cut(s) 1418
TseI GCWGC 7 cut(s) 396, 1112, 1289, 1292, 1363, 2016, 2048
Tsp45I GTSAC 1 cut(s) 1418
TspGWI ACGGA 2 cut(s) 174, 505
TspRI CASTG 4 cut(s) 477, 906, 1094, 1427
VneI GTGCAC 1 cut(s) 1746
VpaK11BI GGWCC 3 cut(s) 90, 114, 238
XapI RAATTY 4 cut(s) 1208, 1436, 1481, 1643
XceI RCATGY 2 cut(s) 922, 1917
XcmI CCANNNNNNNNNTGG 2 cut(s) 496, 1094
XhoI CTCGAG 1 cut(s) 158
XmnI GAANNNNTTC 5 cut(s) 479, 1124, 1355, 1545, 2067
XspI CTAG 1 cut(s) 1994
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.