Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0005468

Physical Location & Seq

Genomic Coordinates Forward (+)

9077874 .. 9083652

Gene Structure 5779 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g09470.t8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGGCCGCCAAACCCAATTCCCGGCGTCCACCCCTAACAGTCCTCCGGGAACAGTTCCTCAGACCCAACCGCAACTCCAGACCTCCTCTCAGCTACGCCTCTCCTCCCAAACCCACCTCCTCCTCCTCAAAATCCCAATGCAGCAAAACCGCCCAAGCCATGGCTTCCCTCATCAACTCCACCCCATGGTCACCTCACCTCCAGTCCTCCCTCTCCTCTCTCTCCCCCTCCATCTCCACCACCACCGTCTCCCAAACCCTCCGCCGCATCAAAACCCCCTCTCAAGCCATCAAGTTCTTCAACTGGGTTGAATCTCTCGGCTTCTCCCACACCTCCCACTCCTACTTCACCATCCTCGAACTCCTCGGCCGCAACAGAAACCTCAACGCCGCTCGAAACTTCCTCTTCTCGATTGAGAAGAGGTCCAACGGCAAGGTCAAGCTCGAGGACAAGTTCTTCAACAGCTTGATCAGAAGCTACGGAGCAGCAGGGCTGTTTCAGGAGGCTGTGAATGTCTTCAAGACAATGAAGTCCATGGGGATTTCGGCCTCTGTATTTAGTTTCAATAGTTTGTTTTCGGTTTTGCTTAAGAGGGGTAGAACTAGTATGGTGAGGAATGTTTATGATGAGATGCTTGGGATGTATGGAGTTGAGCCGGATACGCATACGTTTAATATTTTGATCAGGGGGTTTTGTATGAGCTCCATGGTTGATGAGGGGTTTTGGTTTTTTAAGGAAATGGAGAGGTTTAAGTGTGAGCCGGATGTTGTTACGTATAATACTCTTGTTGATGGGTTGTGTAGAGATGGAAAGGTGGAGATTGCGAGGAATGTGGTCAAGGGGATGATGAGTAAGAGCAGTGAAGGGGAGTTGAATCAGTTGAATCCGAATGTTGTTACTTATACGACTTTGATTAGAGGGTACTGTGTGAGGCAAGAGGTTGATGAGGCTTTGGGGGTGTTGGAGGAGATGACTAGTCAGGGGATGAAGCCGAATGAGATTACTTATAATACTTTGTTTAAAGGACTTTGTGAAGCAAAGAGGCTGGATAAGATTAAGGAAATCTTGGAGGGGGCAATGAGAGGTGAAGGATTTACTCCTGACACGTGTACGTTTAACACGCTGATGCATTCACATTGCATTGCAGGGAACTTGGAGGAAGCATTGAAGGTTTTCAGAATGATGTCAGAGTTAAAGGTCCCTCCAGATTCAGCTACATATAGTGTTTTGATACGCAGTTGGTGTGAGCGAAGAGATTATAGTAAAGCTGAGGAGTTGTTTGACGAGCTATCCAAGAAACAAATCTTGTTAAGTGATTGTGGCTGTACGCCTATAGTTGCGTCTTACAAGCCTATATTTGAGTACTTGTGTAGTAATGGGAGAACTAAGAAAGCAGATGAAGTGTTTAGGCAGCTACTGAAAAGAGGAACACAGGATCCTCCATCCTTCAAGACTTTGATCATGGGCCACTGTAGGGAAGGAACATATGAAGCTGGATACAAGCTCGTAGTCTTGATGCTGAGAAGGGATTATGTGCCGGATGTCAAGATTTATGATTCCTTAATTGATGGTTTCTTGGAGAAGGGTAATCCCCTGCTTGCACAACAGACTCTTGAGAAGATGCTGAAGAGCTCTCATCTACCAAGAACGTCTACTTTCCATTCTATACTGGCAGCTCTTCTAGAAAAGCATTGTGCCCGTGAATCTGCAAGCCTTTTTAGTTTAATGTTGGAGAAAAACTTTAGACCAAATATTGATCTCTCAACAGATCTTCTAAAGCTACTTTTCAGTGAGGGATTGCAAGAGAAAGCATTTAAGATTGTAGGATTGCTGCATGATGGTGGATACTCGATTAAATTGGAAGAACTGGTCAAGTTCCTTTGCCAGAGCAGAAAGCTATTAGAGGCATGTGAGTTACTACAATTCAGTCTGCGGAAGCAAGAAAATGTCAGTATTGATATTCTTGACCAAGTTATATTGGGGCTATGTGAAATCAATAAGCTTCGAGAAGCATTTGGCTTGTACTACGAACTGATCGAGAATGGTGACCATGGGCAGTTGCCATGCTTACATCATCTAAAATCTTCCCTAGAGGTTGCAGGTAGATCAGTTGAAGCTGACTTTGTCTCTAAAAGGATGCCGATACATCAGCTGGTGGATAAGTCTGGAAAGTCAAGACCTGAACTGTACGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Chal_sti_synt_C Chal_sti_synt_N PPR PPR_1 PPR_2 PPR_3

Protein Analysis

732

Amino Acids

82.69

Weight (kDa)

8.84

Isoelectric Point (pI)

41.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	153 - 195	6.5e-08	PPR repeat family
PPR	PF01535	153 - 181	4.2e-06	PPR repeat
PPR_2	PF13041	184 - 232	3e-11	PPR repeat family
PPR_long	PF17177	206 - 358	3.4e-09	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	216 - 248	1.2e-08	PPR repeat
PPR_2	PF13041	219 - 268	4.1e-16	PPR repeat family
PPR	PF01535	223 - 252	2.5e-06	PPR repeat
PPR_1	PF12854	252 - 282	2.9e-12	PPR repeat
PPR_3	PF13812	293 - 341	1.3e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	294 - 325	4.7e-11	PPR repeat
PPR_2	PF13041	296 - 344	6.6e-19	PPR repeat family
PPR	PF01535	299 - 328	4.7e-07	PPR repeat
PPR_1	PF12854	328 - 351	5.8e-06	PPR repeat
PPR_3	PF13812	360 - 412	3.2e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	364 - 395	2e-10	PPR repeat
PPR_2	PF13041	367 - 415	1.1e-14	PPR repeat family
PPR	PF01535	371 - 398	1.4e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0005468)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02060
fragaria_vesca	FvH4_7g09470 FvH4_7g09470 FvH4_7g09470 FvH4_7g09470 FvH4_7g09470 FvH4_7g09470 FvH4_7g09470 FvH4_7g09470 FvH4_7g09470
malus_domestica	MD02G1218600.v1.1
prunus_persica	Prupe.2G122500_v2.0.a1
pyrus_communis	pycom12652g00050
rosa_chinensis	RchiOBHm_Chr1g0346171
rosa_laevigata	RLG00000028810
rosa_multiflora	Rmu_sc0003809.1_g000024
rosa_roxburghii	Rroxscaffold_4G00308800
rosa_rugosa	Rorug01G0178600
rosa_samantha	Rh1AG197700 Rh1BG162900 Rh1BG163000 Rh1BG163800 Rh1CG182800 Rh1DG193600 Rh1DG193700 Rh1DG194800
rosa_wichuraiana	Rw1G016310 Rw1G016590 Rw1G016620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1008
AasI	GACNNNNNNGTC	1 cut(s)	529
Acc36I	ACCTGC	1 cut(s)	2090
AccB7I	CCANNNNNTGG	2 cut(s)	160, 186
AccBSI	CCGCTC	1 cut(s)	392
AccI	GTMKAC	1 cut(s)	1652
AciI	CCGC	8 cut(s)	6, 70, 150, 262, 265, 370, 390, 1933
AclWI	GGATC	2 cut(s)	1430, 1443
AcoI	YGGCCR	2 cut(s)	3, 367
AcuI	CTGAAG	1 cut(s)	1646
AcvI	CACGTG	1 cut(s)	1107
AcyI	GRCGYC	1 cut(s)	25
AfaI	GTAC	6 cut(s)	923, 1111, 1327, 1364, 2024, 2189
AfiI	CCNNNNNNNGG	4 cut(s)	21, 160, 186, 1474
AflII	CTTAAG	1 cut(s)	587
AflIII	ACRYGT	2 cut(s)	1104, 1106
AhlI	ACTAGT	2 cut(s)	602, 974
AloI	GAACNNNNNNTCC	2 cut(s)	1420, 1452
Alw21I	GWGCWC	2 cut(s)	704, 1634
Alw26I	GTCTC	2 cut(s)	253, 2131
AlwI	GGATC	2 cut(s)	1430, 1443
AlwNI	CAGNNNCTG	1 cut(s)	1417
Ama87I	CYCGRG	1 cut(s)	443
AoxI	GGCC	4 cut(s)	3, 367, 546, 1465
ApeKI	GCWGC	5 cut(s)	141, 485, 1411, 1673, 1831
Asp700I	GAANNNNTTC	2 cut(s)	515, 1172
AspS9I	GGNCC	3 cut(s)	423, 1198, 1465
AsuC2I	CCSGG	2 cut(s)	22, 47
AsuHPI	GGTGA	6 cut(s)	183, 188, 340, 622, 1097, 2057
AvaI	CYCGRG	1 cut(s)	443
AvaII	GGWCC	2 cut(s)	423, 1198
BaeGI	GKGCMC	1 cut(s)	1699
BamHI	GGATCC	1 cut(s)	1435
BanII	GRGCYC	2 cut(s)	704, 1634
BbrPI	CACGTG	1 cut(s)	1107
BbsI	GAAGAC	1 cut(s)	508
Bbv12I	GWGCWC	2 cut(s)	704, 1634
BbvCI	CCTCAGC	1 cut(s)	1269
BbvI	GCAGC	5 cut(s)	153, 497, 1423, 1685, 1818
BccI	CCATC	8 cut(s)	239, 296, 359, 785, 800, 1450, 1562, 1832
BceAI	ACGGC	1 cut(s)	445
BciVI	GTATCC	3 cut(s)	652, 1490, 1838
BclI	TGATCA	3 cut(s)	468, 681, 1458
BcnI	CCSGG	2 cut(s)	22, 47
BcoDI	GTCTC	2 cut(s)	253, 2131
BcuI	ACTAGT	2 cut(s)	602, 974
BfaI	CTAG	4 cut(s)	603, 975, 1682, 2090
BfmI	CTRYAG	2 cut(s)	1332, 1471
BfrI	CTTAAG	1 cut(s)	587
BfuAI	ACCTGC	1 cut(s)	2090
BfuI	GTATCC	3 cut(s)	652, 1490, 1838
BglII	AGATCT	1 cut(s)	1768
BisI	GCNGC	9 cut(s)	6, 142, 265, 370, 390, 486, 1412, 1674, 1832
BlsI	GCNGC	9 cut(s)	7, 143, 266, 371, 391, 487, 1413, 1675, 1833
BmcAI	AGTACT	1 cut(s)	1364
Bme1390I	CCNGG	2 cut(s)	22, 47
Bme18I	GGWCC	2 cut(s)	423, 1198
BmeT110I	CYCGRG	1 cut(s)	443
BmgT120I	GGNCC	3 cut(s)	423, 1198, 1465
BmiI	GGNNCC	2 cut(s)	1200, 1437
BmrFI	CCNGG	2 cut(s)	22, 47
BmrI	ACTGGG	1 cut(s)	313
BmsI	GCATC	6 cut(s)	276, 621, 1116, 1506, 1611, 2127
BmuI	ACTGGG	1 cut(s)	313
BpiI	GAAGAC	1 cut(s)	508
BpmI	CTGGAG	3 cut(s)	61, 185, 1188
Bpu10I	CCTNAGC	1 cut(s)	1269
BpuEI	CTTGAG	2 cut(s)	267, 1634
BpuMI	CCSGG	2 cut(s)	22, 47
BsaAI	YACGTR	2 cut(s)	774, 1107
BsaHI	GRCGYC	1 cut(s)	25
BsaJI	CCNNGG	6 cut(s)	159, 185, 364, 534, 705, 2050
BsaXI	ACNNNNNCTCC	4 cut(s)	59, 89, 183, 213
Bsc4I	CCNNNNNNNGG	4 cut(s)	21, 160, 186, 1474
Bse1I	ACTGG	4 cut(s)	202, 308, 1674, 1872
Bse3DI	GCAATG	3 cut(s)	1083, 1135, 1140
BseDI	CCNNGG	6 cut(s)	159, 185, 364, 534, 705, 2050
BseGI	GGATG	8 cut(s)	351, 645, 769, 849, 990, 1442, 1546, 2142
BseLI	CCNNNNNNNGG	4 cut(s)	21, 160, 186, 1474
BseMI	GCAATG	3 cut(s)	1083, 1135, 1140
BseMII	CTCAG	4 cut(s)	73, 103, 1260, 1511
BseNI	ACTGG	4 cut(s)	202, 308, 1674, 1872
BseRI	GAGGAG	9 cut(s)	75, 93, 109, 112, 115, 205, 353, 980, 1286
BseSI	GKGCMC	1 cut(s)	1699
BseX3I	CGGCCG	1 cut(s)	367
BseXI	GCAGC	5 cut(s)	153, 497, 1423, 1685, 1818
Bsh1285I	CGRYCG	1 cut(s)	370
BshFI	GGCC	4 cut(s)	5, 369, 548, 1467
BsiEI	CGRYCG	1 cut(s)	370
BsiHKAI	GWGCWC	2 cut(s)	704, 1634
BsiHKCI	CYCGRG	1 cut(s)	443
BsiSI	CCGG	5 cut(s)	22, 46, 656, 761, 1538
BslFI	GGGAC	1 cut(s)	1184
BslI	CCNNNNNNNGG	4 cut(s)	21, 160, 186, 1474
BsmAI	GTCTC	2 cut(s)	253, 2131
BsmBI	CGTCTC	1 cut(s)	253
BsmFI	GGGAC	1 cut(s)	1184
BsmI	GAATGC	1 cut(s)	1129
BsnI	GGCC	4 cut(s)	5, 369, 548, 1467
BsoBI	CYCGRG	1 cut(s)	443
Bsp1286I	GDGCHC	3 cut(s)	704, 1634, 1699
Bsp143I	GATC	8 cut(s)	468, 681, 1435, 1458, 1756, 1768, 2034, 2105
Bsp19I	CCATGG	5 cut(s)	159, 185, 534, 705, 2050
BspACI	CCGC	8 cut(s)	6, 70, 150, 262, 265, 370, 390, 1933
BspANI	GGCC	4 cut(s)	5, 369, 548, 1467
BspCNI	CTCAG	4 cut(s)	72, 102, 1261, 1512
BspLI	GGNNCC	2 cut(s)	1200, 1437
BspMI	ACCTGC	1 cut(s)	2090
BspPI	GGATC	2 cut(s)	1430, 1443
BspQI	GCTCTTC	2 cut(s)	1622, 1683
BspTI	CTTAAG	1 cut(s)	587
BsrBI	CCGCTC	1 cut(s)	392
BsrDI	GCAATG	3 cut(s)	1083, 1135, 1140
BsrI	ACTGG	4 cut(s)	202, 308, 1674, 1872
BssECI	CCNNGG	6 cut(s)	159, 185, 364, 534, 705, 2050
BssMI	GATC	8 cut(s)	468, 681, 1435, 1458, 1756, 1768, 2034, 2105
BssNI	GRCGYC	1 cut(s)	25
BssT1I	CCWWGG	5 cut(s)	159, 185, 534, 705, 2050
Bst4CI	ACNGT	6 cut(s)	40, 54, 247, 926, 1472, 2187
Bst6I	CTCTTC	5 cut(s)	410, 413, 1246, 1622, 1683
BstACI	GRCGYC	1 cut(s)	25
BstAFI	CTTAAG	1 cut(s)	587
BstBAI	YACGTR	2 cut(s)	774, 1107
BstC8I	GCNNGC	2 cut(s)	1599, 1711
BstDEI	CTNAG	5 cut(s)	59, 89, 1269, 1386, 1520
BstDSI	CCRYGG	5 cut(s)	159, 185, 534, 705, 2050
BstEII	GGTNACC	2 cut(s)	189, 2045
BstF5I	GGATG	8 cut(s)	351, 645, 769, 849, 990, 1442, 1546, 2142
BstKTI	GATC	8 cut(s)	471, 684, 1438, 1461, 1759, 1771, 2037, 2108
BstMAI	GTCTC	2 cut(s)	253, 2131
BstMBI	GATC	8 cut(s)	468, 681, 1435, 1458, 1756, 1768, 2034, 2105
BstMCI	CGRYCG	1 cut(s)	370
BstMWI	GCNNNNNNNGC	1 cut(s)	661
BstNSI	RCATGY	1 cut(s)	1911
BstPI	GGTNACC	2 cut(s)	189, 2045
BstSCI	CCNGG	2 cut(s)	20, 45
BstSFI	CTRYAG	2 cut(s)	1332, 1471
BstSLI	GKGCMC	1 cut(s)	1699
BstSNI	TACGTA	1 cut(s)	774
BstV1I	GCAGC	5 cut(s)	153, 497, 1423, 1685, 1818
BstV2I	GAAGAC	1 cut(s)	508
BstX2I	RGATCY	2 cut(s)	1435, 1768
BstYI	RGATCY	2 cut(s)	1435, 1768
BstZI	CGGCCG	1 cut(s)	367
BsuI	GTATCC	3 cut(s)	652, 1490, 1838
BsuRI	GGCC	4 cut(s)	5, 369, 548, 1467
BtgI	CCRYGG	5 cut(s)	159, 185, 534, 705, 2050
BtsCI	GGATG	8 cut(s)	351, 645, 769, 849, 990, 1442, 1546, 2142
BtsI	GCAGTG	1 cut(s)	865
BtsIMutI	CAGTG	3 cut(s)	865, 1468, 1795
BveI	ACCTGC	1 cut(s)	2090
Cac8I	GCNNGC	2 cut(s)	1599, 1711
CaiI	CAGNNNCTG	1 cut(s)	1417
Cfr13I	GGNCC	3 cut(s)	423, 1198, 1465
CseI	GACGC	2 cut(s)	14, 1329
Csp6I	GTAC	6 cut(s)	922, 1110, 1326, 1363, 2023, 2188
CviAII	CATG	9 cut(s)	160, 186, 535, 706, 1462, 1835, 1908, 2051, 2064
CviQI	GTAC	6 cut(s)	922, 1110, 1326, 1363, 2023, 2188
DdeI	CTNAG	5 cut(s)	59, 89, 1269, 1386, 1520
DpnI	GATC	8 cut(s)	470, 683, 1437, 1460, 1758, 1770, 2036, 2107
DpnII	GATC	8 cut(s)	468, 681, 1435, 1458, 1756, 1768, 2034, 2105
DraI	TTTAAA	1 cut(s)	1021
DrdI	GACNNNNNNGTC	1 cut(s)	529
DseDI	GACNNNNNNGTC	1 cut(s)	529
EaeI	YGGCCR	2 cut(s)	3, 367
EagI	CGGCCG	1 cut(s)	367
Eam1104I	CTCTTC	5 cut(s)	410, 413, 1246, 1622, 1683
EarI	CTCTTC	5 cut(s)	410, 413, 1246, 1622, 1683
EciI	GGCGGA	1 cut(s)	251
Ecl136II	GAGCTC	2 cut(s)	702, 1632
EclXI	CGGCCG	1 cut(s)	367
Eco105I	TACGTA	1 cut(s)	774
Eco130I	CCWWGG	5 cut(s)	159, 185, 534, 705, 2050
Eco24I	GRGCYC	2 cut(s)	704, 1634
Eco47I	GGWCC	2 cut(s)	423, 1198
Eco52I	CGGCCG	1 cut(s)	367
Eco53kI	GAGCTC	2 cut(s)	702, 1632
Eco57I	CTGAAG	1 cut(s)	1646
Eco72I	CACGTG	1 cut(s)	1107
Eco88I	CYCGRG	1 cut(s)	443
Eco91I	GGTNACC	2 cut(s)	189, 2045
EcoICRI	GAGCTC	2 cut(s)	702, 1632
EcoO109I	RGGNCCY	1 cut(s)	1198
EcoO65I	GGTNACC	2 cut(s)	189, 2045
EcoT14I	CCWWGG	5 cut(s)	159, 185, 534, 705, 2050
EcoT22I	ATGCAT	1 cut(s)	1131
EcoT38I	GRGCYC	2 cut(s)	704, 1634
ErhI	CCWWGG	5 cut(s)	159, 185, 534, 705, 2050
Esp3I	CGTCTC	1 cut(s)	253
FaeI	CATG	9 cut(s)	163, 189, 538, 709, 1465, 1838, 1911, 2054, 2067
FalI	AAGNNNNNCTT	2 cut(s)	1049, 1081
FaqI	GGGAC	1 cut(s)	1184
FatI	CATG	9 cut(s)	159, 185, 534, 705, 1461, 1834, 1907, 2050, 2063
FauNDI	CATATG	1 cut(s)	1486
FbaI	TGATCA	3 cut(s)	468, 681, 1458
FblI	GTMKAC	1 cut(s)	1652
Fnu4HI	GCNGC	9 cut(s)	6, 142, 265, 370, 390, 486, 1412, 1674, 1832
FokI	GGATG	8 cut(s)	338, 652, 776, 856, 997, 1429, 1553, 2149
FriOI	GRGCYC	2 cut(s)	704, 1634
Fsp4HI	GCNGC	9 cut(s)	6, 142, 265, 370, 390, 486, 1412, 1674, 1832
FspBI	CTAG	4 cut(s)	603, 975, 1682, 2090
GluI	GCNGC	9 cut(s)	6, 142, 265, 370, 390, 486, 1412, 1674, 1832
GsuI	CTGGAG	3 cut(s)	61, 185, 1188
HaeIII	GGCC	4 cut(s)	5, 369, 548, 1467
HapII	CCGG	5 cut(s)	22, 46, 656, 761, 1538
HgaI	GACGC	2 cut(s)	14, 1329
Hin1I	GRCGYC	1 cut(s)	25
Hin1II	CATG	9 cut(s)	163, 189, 538, 709, 1465, 1838, 1911, 2054, 2067
HindIII	AAGCTT	1 cut(s)	2000
HinfI	GANTC	7 cut(s)	311, 874, 883, 1208, 1556, 1609, 1703
HpaII	CCGG	5 cut(s)	22, 46, 656, 761, 1538
HphI	GGTGA	6 cut(s)	183, 188, 340, 622, 1097, 2057
Hpy166II	GTNNAC	3 cut(s)	29, 1110, 1653
Hpy188I	TCNGA	5 cut(s)	62, 473, 888, 1178, 1189
Hpy8I	GTNNAC	3 cut(s)	29, 1110, 1653
HpyAV	CCTTC	7 cut(s)	857, 1082, 1162, 1456, 1472, 1518, 1576
HpyCH4III	ACNGT	6 cut(s)	40, 54, 247, 926, 1472, 2187
HpyCH4IV	ACGT	6 cut(s)	668, 773, 1106, 1112, 1649, 2190
HpyCH4V	TGCA	9 cut(s)	141, 1129, 1140, 1145, 1601, 1709, 1801, 1834, 2099
HpyF10VI	GCNNNNNNNGC	1 cut(s)	661
HpyF3I	CTNAG	5 cut(s)	59, 89, 1269, 1386, 1520
HpySE526I	ACGT	6 cut(s)	668, 773, 1106, 1112, 1649, 2190
Hsp92I	GRCGYC	1 cut(s)	25
Hsp92II	CATG	9 cut(s)	163, 189, 538, 709, 1465, 1838, 1911, 2054, 2067
Ksp22I	TGATCA	3 cut(s)	468, 681, 1458
Kzo9I	GATC	8 cut(s)	468, 681, 1435, 1458, 1756, 1768, 2034, 2105
LguI	GCTCTTC	2 cut(s)	1622, 1683
LmnI	GCTCC	2 cut(s)	482, 707
Lsp1109I	GCAGC	5 cut(s)	153, 497, 1423, 1685, 1818
LweI	GCATC	6 cut(s)	276, 621, 1116, 1506, 1611, 2127
MaeI	CTAG	4 cut(s)	603, 975, 1682, 2090
MaeII	ACGT	6 cut(s)	668, 773, 1106, 1112, 1649, 2190
MaeIII	GTNAC	5 cut(s)	189, 769, 895, 1914, 2045
MalI	GATC	8 cut(s)	470, 683, 1437, 1460, 1758, 1770, 2036, 2107
MbiI	CCGCTC	1 cut(s)	392
MboI	GATC	8 cut(s)	468, 681, 1435, 1458, 1756, 1768, 2034, 2105
MflI	RGATCY	2 cut(s)	1435, 1768
MhlI	GDGCHC	3 cut(s)	704, 1634, 1699
MluCI	AATT	4 cut(s)	16, 1563, 1856, 1922
MlyI	GAGTC	1 cut(s)	1603
MmeI	TCCRAC	3 cut(s)	450, 942, 1710
Mph1103I	ATGCAT	1 cut(s)	1131
MroXI	GAANNNNTTC	2 cut(s)	515, 1172
MslI	CAYNNNNRTG	2 cut(s)	1124, 1839
MspA1I	CMGCKG	1 cut(s)	2152
MspCI	CTTAAG	1 cut(s)	587
MspI	CCGG	5 cut(s)	22, 46, 656, 761, 1538
MspR9I	CCNGG	2 cut(s)	22, 47
Mva1269I	GAATGC	1 cut(s)	1129
MwoI	GCNNNNNNNGC	1 cut(s)	661
NciI	CCSGG	2 cut(s)	22, 47
NcoI	CCATGG	5 cut(s)	159, 185, 534, 705, 2050
NdeI	CATATG	1 cut(s)	1486
NdeII	GATC	8 cut(s)	468, 681, 1435, 1458, 1756, 1768, 2034, 2105
NlaIII	CATG	9 cut(s)	163, 189, 538, 709, 1465, 1838, 1911, 2054, 2067
NlaIV	GGNNCC	2 cut(s)	1200, 1437
NmeAIII	GCCGAG	2 cut(s)	297, 345
NmuCI	GTSAC	2 cut(s)	189, 2045
NsiI	ATGCAT	1 cut(s)	1131
NspI	RCATGY	1 cut(s)	1911
PaeR7I	CTCGAG	1 cut(s)	443
PciSI	GCTCTTC	2 cut(s)	1622, 1683
PcsI	WCGNNNNNNNCGW	1 cut(s)	2034
PctI	GAATGC	1 cut(s)	1129
PdmI	GAANNNNTTC	2 cut(s)	515, 1172
PfeI	GAWTC	6 cut(s)	311, 874, 883, 1208, 1556, 1703
PflFI	GACNNNGTC	1 cut(s)	2123
PflMI	CCANNNNNTGG	2 cut(s)	160, 186
PfoI	TCCNGGA	1 cut(s)	45
PkrI	GCNGC	9 cut(s)	7, 143, 266, 371, 391, 487, 1413, 1675, 1833
PleI	GAGTC	1 cut(s)	1603
PmaCI	CACGTG	1 cut(s)	1107
PmlI	CACGTG	1 cut(s)	1107
PpsI	GAGTC	1 cut(s)	1603
Ppu21I	YACGTR	2 cut(s)	774, 1107
PpuMI	RGGWCCY	1 cut(s)	1198
PsiI	TTATAA	1 cut(s)	1008
Psp124BI	GAGCTC	2 cut(s)	704, 1634
Psp5II	RGGWCCY	1 cut(s)	1198
PspCI	CACGTG	1 cut(s)	1107
PspEI	GGTNACC	2 cut(s)	189, 2045
PspN4I	GGNNCC	2 cut(s)	1200, 1437
PspPI	GGNCC	3 cut(s)	423, 1198, 1465
PspPPI	RGGWCCY	1 cut(s)	1198
PspXI	VCTCGAGB	1 cut(s)	443
PstNI	CAGNNNCTG	1 cut(s)	1417
PsuI	RGATCY	2 cut(s)	1435, 1768
PsyI	GACNNNGTC	1 cut(s)	2123
PvuII	CAGCTG	1 cut(s)	2152
RsaI	GTAC	6 cut(s)	923, 1111, 1327, 1364, 2024, 2189
RsaNI	GTAC	6 cut(s)	922, 1110, 1326, 1363, 2023, 2188
RseI	CAYNNNNRTG	2 cut(s)	1124, 1839
SacI	GAGCTC	2 cut(s)	704, 1634
SapI	GCTCTTC	2 cut(s)	1622, 1683
SatI	GCNGC	9 cut(s)	6, 142, 265, 370, 390, 486, 1412, 1674, 1832
Sau3AI	GATC	8 cut(s)	468, 681, 1435, 1458, 1756, 1768, 2034, 2105
Sau96I	GGNCC	3 cut(s)	423, 1198, 1465
ScaI	AGTACT	1 cut(s)	1364
SchI	GAGTC	1 cut(s)	1603
ScrFI	CCNGG	2 cut(s)	22, 47
SduI	GDGCHC	3 cut(s)	704, 1634, 1699
SfaNI	GCATC	6 cut(s)	276, 621, 1116, 1506, 1611, 2127
SfcI	CTRYAG	2 cut(s)	1332, 1471
Sfr274I	CTCGAG	1 cut(s)	443
SinI	GGWCC	2 cut(s)	423, 1198
SlaI	CTCGAG	1 cut(s)	443
SmiMI	CAYNNNNRTG	2 cut(s)	1124, 1839
SmlI	CTYRAG	4 cut(s)	282, 443, 587, 1613
SmoI	CTYRAG	4 cut(s)	282, 443, 587, 1613
SnaBI	TACGTA	1 cut(s)	774
SpeI	ACTAGT	2 cut(s)	602, 974
Sse9I	AATT	4 cut(s)	16, 1563, 1856, 1922
SsiI	CCGC	8 cut(s)	6, 70, 150, 262, 265, 370, 390, 1933
SspI	AATATT	2 cut(s)	676, 1753
SspMI	CTAG	4 cut(s)	603, 975, 1682, 2090
SstI	GAGCTC	2 cut(s)	704, 1634
StyD4I	CCNGG	2 cut(s)	20, 45
StyI	CCWWGG	5 cut(s)	159, 185, 534, 705, 2050
TaaI	ACNGT	6 cut(s)	40, 54, 247, 926, 1472, 2187
TaiI	ACGT	6 cut(s)	671, 776, 1109, 1115, 1652, 2193
TaqI	TCGA	7 cut(s)	357, 394, 410, 444, 1850, 2005, 2037
TasI	AATT	4 cut(s)	16, 1563, 1856, 1922
TatI	WGTACW	2 cut(s)	1362, 2022
TauI	GCSGC	4 cut(s)	8, 267, 372, 392
TfiI	GAWTC	6 cut(s)	311, 874, 883, 1208, 1556, 1703
TscAI	CASTG	3 cut(s)	865, 1475, 1795
TseFI	GTSAC	2 cut(s)	189, 2045
TseI	GCWGC	5 cut(s)	141, 485, 1411, 1673, 1831
Tsp45I	GTSAC	2 cut(s)	189, 2045
TspDTI	ATGAA	4 cut(s)	542, 1001, 1413, 1503
TspGWI	ACGGA	1 cut(s)	495
TspRI	CASTG	3 cut(s)	865, 1475, 1795
Tth111I	GACNNNGTC	1 cut(s)	2123
Van91I	CCANNNNNTGG	2 cut(s)	160, 186
Vha464I	CTTAAG	1 cut(s)	587
VpaK11BI	GGWCC	2 cut(s)	423, 1198
XbaI	TCTAGA	1 cut(s)	1681
XceI	RCATGY	1 cut(s)	1911
XhoI	CTCGAG	1 cut(s)	443
XmiI	GTMKAC	1 cut(s)	1652
XmnI	GAANNNNTTC	2 cut(s)	515, 1172
XspI	CTAG	4 cut(s)	603, 975, 1682, 2090
ZrmI	AGTACT	1 cut(s)	1364
Zsp2I	ATGCAT	1 cut(s)	1131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.