Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0005468

Physical Location & Seq

Genomic Coordinates Forward (+)

24537928 .. 24539556

Gene Structure 1629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0178600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGAAGCAATCGGCAGAGCTAGTGTTCATCCCATCCCCAGGCATTGGCCACCTCGTGGCTACGGTGGAGGTTGCAAAGCTCCTCTTGTCTCGAGATGATCAACTCTTCATCACCGTCCTCATCATTAAGTTCCCGTTCAGCTTAGACGACACCGATGCCTACGTTGAGTCCTTCGCGGACTCTTCCATATCACATCGGATCAAGTTCATCAACCTCCCACAGCAGAATATGGAGACACAAGGTAATAGCACCATCAACTTCTGGAACTTCATTGACAATCAGCAAACCAACGTTAAAGATGTTGTCGCCAAACTCATCGAGTCCGAGACCAAGAATCGACTCGCCGGGTTTGTCATCGACATGTTTTGTACCTCTATGATCGACGTAGCCAACGAATTAGGGGTTCCTACCTACATGTTTTTCACGTCCAGCGCCTCCATGCTCGGGCTCATGTTCCACCTTCAAGCACTTCGTGATGATCACAACAAGGACTGCATTGAGTTCAAGGACTCAACTGCTGATTTGGTGGTCCCGAGTTACTCCAACCCCTTGCCAGCTGCTAGAATCTTACCTAGTGTCCTTCTCGAAAAGGAGACCGGCAACATGTTCCTCAACTTGGCCAAAAGGTTTAGAGATGTCAAGGGTATTTTGATAAATACATTCACAGAGCTGGAGTCGCATGCCCTTCTTTCTCTCAGTTCTGATGGTAAGATCCCTCCGGTGTATCCGGCGGGACCCATACTAAACGTGAAGAGCGATGACAACAATGACCAAGTGGATTCGAAGCAGTCGAAGCAAAAGTCTGATATCTTGAAATGGCTCGATGATCAGCCTCCGTCGTCTGTAGTGTTTCTGTGCTTTGGGAGTAGGGGAAGCTTCAGTGAAGACCAGGTGAAAGAGATTGCCCGCGCATTGGAGCATGCAGGGTTTCGGTTCTTGTGGTCCCTACGTCAGCCTCCACCAAAGGGAAAGATTGGAATGCCCAGCGACTATGCCGATCACACAGGGGTGTTACCTGAAGGGTTTCTTGATCGAACGGCTGGGGTCGGAAAAGTTATAGGGTGGGCGCCACAAGCTGCCATCTTAGCCCACTCGGCAGTCGGAGGTTTCGTCTCTCACTGTGGGTGGAATTCCACTCTGGAGAGCTTGTGGTTTGGAGTGCCGGTTGCCACGTGGCCCTTGTATGCCGAGCAACAACTAAATGCATTTCAGCTAGTTACGGAACTAGGGATAGCCGTGGAAATTGATATGAGTTATAGGATGGATGATCCAGTTGTTGTGACTGCAGAGAAGATTGAGAGTGGAATAAAGGAGCTAATGGAGCTTGATAGTGATATAAGGAAGAGGGTGAAACAGATGAGTGATAATAGCAAGAAAGCTTTGATGGATGGGGGGTCCTCATATGCTGCGTTGGGACACTTCATTGATCAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Chal_sti_synt_C Chal_sti_synt_N PPR PPR_1 PPR_2 PPR_3

Protein Analysis

478

Amino Acids

52.9

Weight (kDa)

5.05

Isoelectric Point (pI)

44.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	270 - 418	1.9e-20	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005468)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02060
fragaria_vesca	FvH4_7g09470 FvH4_7g09470 FvH4_7g09470 FvH4_7g09470 FvH4_7g09470 FvH4_7g09470 FvH4_7g09470 FvH4_7g09470 FvH4_7g09470
malus_domestica	MD02G1218600.v1.1
prunus_persica	Prupe.2G122500_v2.0.a1
pyrus_communis	pycom12652g00050
rosa_chinensis	RchiOBHm_Chr1g0346171
rosa_laevigata	RLG00000028810
rosa_multiflora	Rmu_sc0003809.1_g000024
rosa_roxburghii	Rroxscaffold_4G00308800
rosa_rugosa	Rorug01G0178600
rosa_samantha	Rh1AG197700 Rh1BG162900 Rh1BG163000 Rh1BG163800 Rh1CG182800 Rh1DG193600 Rh1DG193700 Rh1DG194800
rosa_wichuraiana	Rw1G016310 Rw1G016590 Rw1G016620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1066
AccB7I	CCANNNNNTGG	2 cut(s)	44, 55
AccII	CGCG	2 cut(s)	176, 909
AciI	CCGC	3 cut(s)	176, 731, 907
AclI	AACGTT	1 cut(s)	291
AclWI	GGATC	3 cut(s)	206, 706, 1262
AcoI	YGGCCR	2 cut(s)	46, 618
AcsI	RAATTY	2 cut(s)	1129, 1431
AcuI	CTGAAG	2 cut(s)	862, 1038
AcvI	CACGTG	1 cut(s)	1173
AcyI	GRCGYC	1 cut(s)	1067
AdeI	CACNNNGTG	2 cut(s)	55, 473
AfaI	GTAC	1 cut(s)	370
AfiI	CCNNNNNNNGG	7 cut(s)	38, 44, 55, 444, 616, 913, 965
AflIII	ACRYGT	3 cut(s)	360, 414, 603
AgsI	TTSAA	3 cut(s)	464, 505, 814
AjiI	CACGTC	1 cut(s)	426
AjnI	CCWGG	2 cut(s)	37, 888
AleI	CACNNNNGTG	1 cut(s)	1007
Alw26I	GTCTC	5 cut(s)	93, 227, 320, 587, 1117
AlwI	GGATC	3 cut(s)	206, 706, 1262
Ama87I	CYCGRG	3 cut(s)	90, 443, 532
AoxI	GGCC	3 cut(s)	46, 618, 1175
ApeKI	GCWGC	3 cut(s)	557, 1076, 1406
ApoI	RAATTY	2 cut(s)	1129, 1431
ArsI	GACNNNNNNTTYG	2 cut(s)	785, 817
Asp700I	GAANNNNTTC	1 cut(s)	1023
AspLEI	GCGC	3 cut(s)	434, 911, 1069
AspS9I	GGNCC	5 cut(s)	529, 734, 942, 1176, 1395
AsuC2I	CCSGG	1 cut(s)	346
AsuHPI	GGTGA	3 cut(s)	103, 904, 1360
AsuII	TTCGAA	1 cut(s)	782
AvaI	CYCGRG	3 cut(s)	90, 443, 532
AvaII	GGWCC	4 cut(s)	529, 734, 942, 1395
BalI	TGGCCA	2 cut(s)	48, 620
BanI	GGYRCC	1 cut(s)	1066
BanII	GRGCYC	1 cut(s)	450
BauI	CACGAG	1 cut(s)	53
BbrPI	CACGTG	1 cut(s)	1173
BbsI	GAAGAC	1 cut(s)	891
BbvI	GCAGC	3 cut(s)	544, 1063, 1393
BccI	CCATC	7 cut(s)	40, 260, 698, 1088, 1255, 1378, 1382
BceAI	ACGGC	2 cut(s)	1053, 1220
BcgI	CGANNNNNNTGC	2 cut(s)	137, 171
BciT130I	CCWGG	2 cut(s)	39, 890
BciVI	GTATCC	1 cut(s)	735
BclI	TGATCA	4 cut(s)	97, 478, 826, 1426
BcnI	CCSGG	1 cut(s)	346
BcoDI	GTCTC	5 cut(s)	93, 227, 320, 587, 1117
BfaI	CTAG	5 cut(s)	20, 561, 573, 1214, 1226
BfmI	CTRYAG	2 cut(s)	843, 1284
BfoI	RGCGCY	2 cut(s)	435, 1070
BfuI	GTATCC	1 cut(s)	735
BglI	GCCNNNNNGGC	1 cut(s)	1094
BisI	GCNGC	3 cut(s)	558, 1077, 1407
BlsI	GCNGC	3 cut(s)	559, 1078, 1408
Bme1390I	CCNGG	3 cut(s)	39, 346, 890
Bme18I	GGWCC	4 cut(s)	529, 734, 942, 1395
BmeT110I	CYCGRG	3 cut(s)	90, 443, 532
BmgBI	CACGTC	1 cut(s)	426
BmgT120I	GGNCC	5 cut(s)	529, 734, 942, 1176, 1395
BmiI	GGNNCC	7 cut(s)	405, 531, 735, 736, 944, 1068, 1396
BmrFI	CCNGG	3 cut(s)	39, 346, 890
BmsI	GCATC	1 cut(s)	145
BpiI	GAAGAC	1 cut(s)	891
BpmI	CTGGAG	2 cut(s)	692, 1160
Bpu14I	TTCGAA	1 cut(s)	782
BpuMI	CCSGG	1 cut(s)	346
BsaAI	YACGTR	1 cut(s)	1173
BsaHI	GRCGYC	1 cut(s)	1067
BsaI	GGTCTC	2 cut(s)	320, 587
BsaJI	CCNNGG	2 cut(s)	37, 1236
BsaWI	WCCGGW	1 cut(s)	718
BsaXI	ACNNNNNCTCC	6 cut(s)	1095, 1125, 1133, 1149, 1163, 1179
Bsc4I	CCNNNNNNNGG	7 cut(s)	38, 44, 55, 444, 616, 913, 965
Bse118I	RCCGGY	2 cut(s)	596, 1162
Bse1I	ACTGG	1 cut(s)	1271
BseBI	CCWGG	2 cut(s)	39, 890
BseDI	CCNNGG	2 cut(s)	37, 1236
BseGI	GGATG	5 cut(s)	27, 32, 1266, 1270, 1393
BseLI	CCNNNNNNNGG	7 cut(s)	38, 44, 55, 444, 616, 913, 965
BseMII	CTCAG	1 cut(s)	709
BseNI	ACTGG	1 cut(s)	1271
BseRI	GAGGAG	1 cut(s)	71
BseXI	GCAGC	3 cut(s)	544, 1063, 1393
BseYI	CCCAGC	2 cut(s)	983, 1040
Bsh1236I	CGCG	2 cut(s)	176, 909
BshFI	GGCC	3 cut(s)	48, 620, 1177
BshNI	GGYRCC	1 cut(s)	1066
BsiHKCI	CYCGRG	3 cut(s)	90, 443, 532
BsiSI	CCGG	5 cut(s)	345, 597, 719, 728, 1163
BslFI	GGGAC	4 cut(s)	515, 747, 928, 1428
BslI	CCNNNNNNNGG	7 cut(s)	38, 44, 55, 444, 616, 913, 965
BsmAI	GTCTC	5 cut(s)	93, 227, 320, 587, 1117
BsmBI	CGTCTC	1 cut(s)	1117
BsmFI	GGGAC	4 cut(s)	515, 747, 928, 1428
BsmI	GAATGC	1 cut(s)	984
BsnI	GGCC	3 cut(s)	48, 620, 1177
Bso31I	GGTCTC	2 cut(s)	320, 587
BsoBI	CYCGRG	3 cut(s)	90, 443, 532
Bsp119I	TTCGAA	1 cut(s)	782
Bsp1286I	GDGCHC	1 cut(s)	450
BspACI	CCGC	3 cut(s)	176, 731, 907
BspANI	GGCC	3 cut(s)	48, 620, 1177
BspCNI	CTCAG	1 cut(s)	708
BspFNI	CGCG	2 cut(s)	176, 909
BspLI	GGNNCC	7 cut(s)	405, 531, 735, 736, 944, 1068, 1396
BspMAI	CTGCAG	1 cut(s)	1288
BspPI	GGATC	3 cut(s)	206, 706, 1262
BspQI	GCTCTTC	1 cut(s)	746
BspT104I	TTCGAA	1 cut(s)	782
BspT107I	GGYRCC	1 cut(s)	1066
BspTNI	GGTCTC	2 cut(s)	320, 587
BsrFI	RCCGGY	2 cut(s)	596, 1162
BsrI	ACTGG	1 cut(s)	1271
BssAI	RCCGGY	2 cut(s)	596, 1162
BssECI	CCNNGG	2 cut(s)	37, 1236
BssNI	GRCGYC	1 cut(s)	1067
BssSI	CACGAG	1 cut(s)	53
Bst2BI	CACGAG	1 cut(s)	53
Bst2UI	CCWGG	2 cut(s)	39, 890
Bst4CI	ACNGT	3 cut(s)	64, 115, 1121
Bst6I	CTCTTC	4 cut(s)	110, 187, 746, 1337
BstACI	GRCGYC	1 cut(s)	1067
BstBAI	YACGTR	1 cut(s)	1173
BstBI	TTCGAA	1 cut(s)	782
BstC8I	GCNNGC	4 cut(s)	555, 681, 907, 921
BstDEI	CTNAG	3 cut(s)	142, 695, 1084
BstDSI	CCRYGG	1 cut(s)	1236
BstF5I	GGATG	5 cut(s)	27, 32, 1266, 1270, 1393
BstFNI	CGCG	2 cut(s)	176, 909
BstH2I	RGCGCY	2 cut(s)	435, 1070
BstHHI	GCGC	3 cut(s)	434, 911, 1069
BstMAI	GTCTC	5 cut(s)	93, 227, 320, 587, 1117
BstMWI	GCNNNNNNNGC	6 cut(s)	676, 793, 1073, 1085, 1094, 1321
BstNI	CCWGG	2 cut(s)	39, 890
BstNSI	RCATGY	5 cut(s)	364, 418, 607, 683, 923
BstSCI	CCNGG	3 cut(s)	37, 344, 888
BstSFI	CTRYAG	2 cut(s)	843, 1284
BstUI	CGCG	2 cut(s)	176, 909
BstV1I	GCAGC	3 cut(s)	544, 1063, 1393
BstV2I	GAAGAC	1 cut(s)	891
BstX2I	RGATCY	1 cut(s)	711
BstYI	RGATCY	1 cut(s)	711
BsuI	GTATCC	1 cut(s)	735
BsuRI	GGCC	3 cut(s)	48, 620, 1177
BtgI	CCRYGG	1 cut(s)	1236
BtgZI	GCGATG	1 cut(s)	771
BtrI	CACGTC	1 cut(s)	426
BtsCI	GGATG	5 cut(s)	27, 32, 1266, 1270, 1393
BtsIMutI	CAGTG	2 cut(s)	886, 1117
Cac8I	GCNNGC	4 cut(s)	555, 681, 907, 921
CfoI	GCGC	3 cut(s)	434, 911, 1069
Cfr10I	RCCGGY	2 cut(s)	596, 1162
Cfr13I	GGNCC	5 cut(s)	529, 734, 942, 1176, 1395
CsiI	ACCWGGT	1 cut(s)	888
Csp6I	GTAC	1 cut(s)	369
CviAII	CATG	7 cut(s)	361, 415, 439, 451, 604, 680, 920
CviQI	GTAC	1 cut(s)	369
DdeI	CTNAG	3 cut(s)	142, 695, 1084
DinI	GGCGCC	1 cut(s)	1068
DraIII	CACNNNGTG	2 cut(s)	55, 473
EaeI	YGGCCR	2 cut(s)	46, 618
Eam1104I	CTCTTC	4 cut(s)	110, 187, 746, 1337
EarI	CTCTTC	4 cut(s)	110, 187, 746, 1337
Eco24I	GRGCYC	1 cut(s)	450
Eco31I	GGTCTC	2 cut(s)	320, 587
Eco32I	GATATC	1 cut(s)	808
Eco47I	GGWCC	4 cut(s)	529, 734, 942, 1395
Eco57I	CTGAAG	2 cut(s)	862, 1038
Eco72I	CACGTG	1 cut(s)	1173
Eco88I	CYCGRG	3 cut(s)	90, 443, 532
EcoO109I	RGGNCCY	2 cut(s)	734, 1395
EcoRI	GAATTC	1 cut(s)	1129
EcoRII	CCWGG	2 cut(s)	37, 888
EcoRV	GATATC	1 cut(s)	808
EcoT22I	ATGCAT	1 cut(s)	1207
EcoT38I	GRGCYC	1 cut(s)	450
EgeI	GGCGCC	1 cut(s)	1068
EheI	GGCGCC	1 cut(s)	1068
Esp3I	CGTCTC	1 cut(s)	1117
FaeI	CATG	7 cut(s)	364, 418, 442, 454, 607, 683, 923
FalI	AAGNNNNNCTT	4 cut(s)	68, 100, 1011, 1043
FaqI	GGGAC	4 cut(s)	515, 747, 928, 1428
FatI	CATG	7 cut(s)	360, 414, 438, 450, 603, 679, 919
FauI	CCCGC	2 cut(s)	724, 914
FauNDI	CATATG	1 cut(s)	1402
FbaI	TGATCA	4 cut(s)	97, 478, 826, 1426
Fnu4HI	GCNGC	3 cut(s)	558, 1077, 1407
FokI	GGATG	5 cut(s)	14, 19, 1273, 1277, 1400
FriOI	GRGCYC	1 cut(s)	450
Fsp4HI	GCNGC	3 cut(s)	558, 1077, 1407
FspBI	CTAG	5 cut(s)	20, 561, 573, 1214, 1226
GlaI	GCGC	3 cut(s)	433, 910, 1068
GluI	GCNGC	3 cut(s)	558, 1077, 1407
GsaI	CCCAGC	2 cut(s)	987, 1044
GsuI	CTGGAG	2 cut(s)	692, 1160
HaeII	RGCGCY	2 cut(s)	435, 1070
HaeIII	GGCC	3 cut(s)	48, 620, 1177
HapII	CCGG	5 cut(s)	345, 597, 719, 728, 1163
HhaI	GCGC	3 cut(s)	434, 911, 1069
Hin1I	GRCGYC	1 cut(s)	1067
Hin1II	CATG	7 cut(s)	364, 418, 442, 454, 607, 683, 923
Hin6I	GCGC	3 cut(s)	432, 909, 1067
HinP1I	GCGC	3 cut(s)	432, 909, 1067
HindIII	AAGCTT	2 cut(s)	874, 1377
HinfI	GANTC	9 cut(s)	167, 179, 320, 334, 339, 509, 564, 674, 779
HpaII	CCGG	5 cut(s)	345, 597, 719, 728, 1163
HphI	GGTGA	3 cut(s)	103, 904, 1360
Hpy188I	TCNGA	6 cut(s)	198, 325, 703, 805, 1049, 1103
Hpy188III	TCNNGA	9 cut(s)	90, 92, 262, 473, 532, 584, 811, 1028, 1139
Hpy99I	CGWCG	2 cut(s)	386, 841
HpyAV	CCTTC	5 cut(s)	181, 470, 590, 695, 1013
HpyCH4III	ACNGT	3 cut(s)	64, 115, 1121
HpyCH4IV	ACGT	7 cut(s)	162, 291, 384, 425, 747, 949, 1172
HpyCH4V	TGCA	5 cut(s)	74, 495, 923, 1205, 1286
HpyF10VI	GCNNNNNNNGC	6 cut(s)	676, 793, 1073, 1085, 1094, 1321
HpyF3I	CTNAG	3 cut(s)	142, 695, 1084
HpySE526I	ACGT	7 cut(s)	162, 291, 384, 425, 747, 949, 1172
Hsp92I	GRCGYC	1 cut(s)	1067
Hsp92II	CATG	7 cut(s)	364, 418, 442, 454, 607, 683, 923
HspAI	GCGC	3 cut(s)	432, 909, 1067
KasI	GGCGCC	1 cut(s)	1066
KflI	GGGWCCC	1 cut(s)	734
Ksp22I	TGATCA	4 cut(s)	97, 478, 826, 1426
LguI	GCTCTTC	1 cut(s)	746
LmnI	GCTCC	4 cut(s)	84, 916, 1312, 1321
Lsp1109I	GCAGC	3 cut(s)	544, 1063, 1393
LweI	GCATC	1 cut(s)	145
MabI	ACCWGGT	1 cut(s)	888
MaeI	CTAG	5 cut(s)	20, 561, 573, 1214, 1226
MaeII	ACGT	7 cut(s)	162, 291, 384, 425, 747, 949, 1172
MaeIII	GTNAC	4 cut(s)	536, 1011, 1216, 1279
MboII	GAAGA	6 cut(s)	97, 174, 763, 896, 1303, 1354
MflI	RGATCY	1 cut(s)	711
MhlI	GDGCHC	1 cut(s)	450
MlsI	TGGCCA	2 cut(s)	48, 620
MluCI	AATT	4 cut(s)	395, 1129, 1242, 1431
MluNI	TGGCCA	2 cut(s)	48, 620
Mly113I	GGCGCC	1 cut(s)	1067
MlyI	GAGTC	6 cut(s)	173, 176, 329, 333, 503, 683
MmeI	TCCRAC	3 cut(s)	567, 1027, 1081
Mox20I	TGGCCA	2 cut(s)	48, 620
Mph1103I	ATGCAT	1 cut(s)	1207
MroXI	GAANNNNTTC	1 cut(s)	1023
MscI	TGGCCA	2 cut(s)	48, 620
MseI	TTAA	3 cut(s)	126, 294, 1435
MslI	CAYNNNNRTG	2 cut(s)	359, 1007
Msp20I	TGGCCA	2 cut(s)	48, 620
MspA1I	CMGCKG	1 cut(s)	557
MspI	CCGG	5 cut(s)	345, 597, 719, 728, 1163
MspR9I	CCNGG	3 cut(s)	39, 346, 890
Mva1269I	GAATGC	1 cut(s)	984
MvaI	CCWGG	2 cut(s)	39, 890
MvnI	CGCG	2 cut(s)	176, 909
MwoI	GCNNNNNNNGC	6 cut(s)	676, 793, 1073, 1085, 1094, 1321
NarI	GGCGCC	1 cut(s)	1067
NciI	CCSGG	1 cut(s)	346
NdeI	CATATG	1 cut(s)	1402
NlaIII	CATG	7 cut(s)	364, 418, 442, 454, 607, 683, 923
NlaIV	GGNNCC	7 cut(s)	405, 531, 735, 736, 944, 1068, 1396
NmeAIII	GCCGAG	2 cut(s)	1073, 1213
NmuCI	GTSAC	1 cut(s)	1279
NsiI	ATGCAT	1 cut(s)	1207
NspI	RCATGY	5 cut(s)	364, 418, 607, 683, 923
NspV	TTCGAA	1 cut(s)	782
OliI	CACNNNNGTG	1 cut(s)	1007
PaeI	GCATGC	2 cut(s)	683, 923
PaeR7I	CTCGAG	1 cut(s)	90
PciI	ACATGT	3 cut(s)	360, 414, 603
PciSI	GCTCTTC	1 cut(s)	746
PcsI	WCGNNNNNNNCGW	4 cut(s)	390, 753, 788, 1107
PctI	GAATGC	1 cut(s)	984
PdmI	GAANNNNTTC	1 cut(s)	1023
PfeI	GAWTC	3 cut(s)	334, 564, 779
PflMI	CCANNNNNTGG	2 cut(s)	44, 55
PkrI	GCNGC	3 cut(s)	559, 1078, 1408
PleI	GAGTC	6 cut(s)	173, 175, 328, 333, 503, 682
PluTI	GGCGCC	1 cut(s)	1070
PmaCI	CACGTG	1 cut(s)	1173
PmlI	CACGTG	1 cut(s)	1173
PpsI	GAGTC	6 cut(s)	173, 175, 328, 333, 503, 682
Ppu21I	YACGTR	1 cut(s)	1173
PpuMI	RGGWCCY	2 cut(s)	734, 1395
PscI	ACATGT	3 cut(s)	360, 414, 603
Psp1406I	AACGTT	1 cut(s)	291
Psp5II	RGGWCCY	2 cut(s)	734, 1395
Psp6I	CCWGG	2 cut(s)	37, 888
PspCI	CACGTG	1 cut(s)	1173
PspFI	CCCAGC	2 cut(s)	983, 1040
PspGI	CCWGG	2 cut(s)	37, 888
PspN4I	GGNNCC	7 cut(s)	405, 531, 735, 736, 944, 1068, 1396
PspPI	GGNCC	5 cut(s)	529, 734, 942, 1176, 1395
PspPPI	RGGWCCY	2 cut(s)	734, 1395
PstI	CTGCAG	1 cut(s)	1288
PsuI	RGATCY	1 cut(s)	711
PvuII	CAGCTG	1 cut(s)	557
RsaI	GTAC	1 cut(s)	370
RsaNI	GTAC	1 cut(s)	369
RseI	CAYNNNNRTG	2 cut(s)	359, 1007
SapI	GCTCTTC	1 cut(s)	746
SaqAI	TTAA	3 cut(s)	126, 294, 1435
SatI	GCNGC	3 cut(s)	558, 1077, 1407
Sau96I	GGNCC	5 cut(s)	529, 734, 942, 1176, 1395
SchI	GAGTC	6 cut(s)	173, 176, 329, 333, 503, 683
ScrFI	CCNGG	3 cut(s)	39, 346, 890
SduI	GDGCHC	1 cut(s)	450
SexAI	ACCWGGT	1 cut(s)	888
SfaNI	GCATC	1 cut(s)	145
SfcI	CTRYAG	2 cut(s)	843, 1284
SfoI	GGCGCC	1 cut(s)	1068
Sfr274I	CTCGAG	1 cut(s)	90
SfuI	TTCGAA	1 cut(s)	782
SinI	GGWCC	4 cut(s)	529, 734, 942, 1395
SlaI	CTCGAG	1 cut(s)	90
SmiMI	CAYNNNNRTG	2 cut(s)	359, 1007
SmlI	CTYRAG	1 cut(s)	90
SmoI	CTYRAG	1 cut(s)	90
SphI	GCATGC	2 cut(s)	683, 923
Sse9I	AATT	4 cut(s)	395, 1129, 1242, 1431
SsiI	CCGC	3 cut(s)	176, 731, 907
SspDI	GGCGCC	1 cut(s)	1066
SspMI	CTAG	5 cut(s)	20, 561, 573, 1214, 1226
StyD4I	CCNGG	3 cut(s)	37, 344, 888
TaaI	ACNGT	3 cut(s)	64, 115, 1121
TaiI	ACGT	7 cut(s)	165, 294, 387, 428, 750, 952, 1175
TasI	AATT	4 cut(s)	395, 1129, 1242, 1431
TfiI	GAWTC	3 cut(s)	334, 564, 779
Tru1I	TTAA	3 cut(s)	126, 294, 1435
Tru9I	TTAA	3 cut(s)	126, 294, 1435
TscAI	CASTG	2 cut(s)	886, 1124
TseFI	GTSAC	1 cut(s)	1279
TseI	GCWGC	3 cut(s)	557, 1076, 1406
Tsp45I	GTSAC	1 cut(s)	1279
TspDTI	ATGAA	6 cut(s)	16, 17, 97, 196, 259, 1411
TspGWI	ACGGA	2 cut(s)	825, 1235
TspRI	CASTG	2 cut(s)	886, 1124
Van91I	CCANNNNNTGG	2 cut(s)	44, 55
VpaK11BI	GGWCC	4 cut(s)	529, 734, 942, 1395
XapI	RAATTY	2 cut(s)	1129, 1431
XceI	RCATGY	5 cut(s)	364, 418, 607, 683, 923
XhoI	CTCGAG	1 cut(s)	90
XmnI	GAANNNNTTC	1 cut(s)	1023
XspI	CTAG	5 cut(s)	20, 561, 573, 1214, 1226
Zsp2I	ATGCAT	1 cut(s)	1207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.