AT1G04650

Domain of unknown function (DUF4487)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0006689
Physical Location & Seq
Reverse (-)
1294627 .. 1299023
4397 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G04650.1

Sequence Viewer

Length: 2994 bp
ATGGAGAAGAATGCGATGAAGTTACTCGAAGAGATCAAATCTTCTGATCTTATCGAGAATCGGGCTCAATTACTCACGCGGCTCAGTCAGTTAGATGTTGAAGAGAATTCTGATTTGCCTTCTTTTGTGGAGAGCCTAACTACACTCTGGGAAGATTTCACATGTCTTGACGTTTCCCTGTGTTTGTTGAACAAGGCGATTCTGCCTGTGGCTTCAAAATACCTCGCTTTGGATCGGCCTGATTGCTCACACTACTTTCTTGCTTTTGCTATTAAGGTAAGCCAATGGTGTGCCAAACATTTAAACATGTCTGTTATGTCCATGGAGGAGTCTCAAGAGGAAGAGCATTCCAACATTTTCTTTCAGCTTCTTTTGGATTATCTTCGTTTTTCTGCCTCAAGCTTTACTGCTATTGGAAAAACTTGTTTCATGACTGATGATGCCTCAGCTGTTACAGTTCATAAGTTTGTTTCAGAGCAGCTCAATTTGACAAAGGAGTTGATAATGAATTCCAAGAAAGTCGAATCCTTTTCCTCGGAGATTTTTAAGGCTGTGCAAGTGGTAATTGATTCTACTGTTCGTCTGTGCAAAGAATACTCTCAAACAGTGAATCGTGAGGTAAGTGAAATGAAGACGAGTGGACATGTAGGAAAGGCAAGGATGGAGGAAGGCAACGCTGTGGGTAATTTGGTGAGCATGATTACGCTGGGAGTTAAATCTCTGAGTGAATTGGGTATGCTTGCTGCAAGAGATGGTGGAAATCTTGTGGCCATTCTTAATACATCTTGGAAGGGTGTGATTACATTGCTTCAACTAGACAAGCAGACATTGGTATCTAAGGTAGATGTAGGAGAAATTATCTTAAAGCTAATATCACTGATCAAGGACTCCCTGAGATTTGCTGCTGAGGCTTGGTCTTGCTCGGTGAAGGAAAACATATCTGCAACGGAAGCCAGAAGGGTCTTTCTTCCTGTGAAATTTTATCTTATCAATGCTGTTAAAGTTGTGGCGCTGTTTCCAAGCCAGGCGTCTATGGTGTCCAAGGATATAGCACTATGCATCTTGATGATCTCTGCTTTCAAAGTTTCACTGAGCCAACAAACTCATGGAAAATCCGCAAGTGAAGTAATGACTGATCTTCTGGAGAAAACAACTGTAGATCTTCTAGGTGCACTGTTAAATGCAGCTGAACTAACACAGGAATTCAGGCTCACACTTCTTGATTCATTGTTCGTTGATGAATTCTCAAACCAAATCTGTAAGAAGCAGAGCCATGATTCTCACACAAAAACATCATTGGTGGATATCTTGTCTTTATCTGTTGAATCTGCGACAAGTGCTAGAGATTTGCTCCTGGCCCGAGTTGTATTGTTCCAGTCTGTCATGAGGTATTCTTTCGAGCTTGACAAAGATGCAAAGCTTGCAATCACCACAAAGCTGCAATGGCTTCTCGACATATTAGCAGACAAAGAGGTTTACTCTTCAGTTCTTTCCTCTCAGCTACCAATGGCAGATGGTTCTGGGAAGATAGTAATCTGGGAATCAATGTATTCAGCTCTGCTTCTGTCTCTCAAAACCCTTATGATCATACTCTCTTCAACTCCTGCCTGGGAAGAGCTTGAAACATTCCTACTTCAGAATCTCTTGCATCCTCACTTCTTGTGTTGGCAGATAGTCATGGAACTCTGGTGCTTCTGGGTTCGTCATGCCACTGACGATTTGGTGGTCGATATGATTAATCAACTTTGTACATTCATTATGTCAATGCCATCATCAGAAACACCTCTTTGTCCAGATTCCGTTCTCAGAAGAACTACAAAGTCCATCTGCTTTCTTCTTACCCATAGCCCCAAATCTTTAACAGTTCAAGTTTACAAACATATTTCTACTGAGAGCAGATCTGACCATGCACCTGATGTATATCTAGCATTGCTGTTAGACGGGTTTCCACTGAATTTTCTTCCAGACAGAATAAAAAACGACGCAAAGAGACAGATATTTGCAGATTTCTTCAACTTCATCGAGAAATTCGATGAGAAACCGTCAAATTCCTCCAGATACACTCTGCTTGGAGCTCCAGTTTTCACAGTATCTGCTTGCCTTCGGATACTAAAGATGAGCATATCAGAGATTGATGCCAAAACTCTGAACTTTGTCGTCGCTCTCATTCAAAAGTACAGAAACTCCAAAGATGAAACGACGAAGGAACGTTACAGTGAGATTCTCAGCGAAACATTATCTATCATCTCAAGAAGCGAACAGCTATACACTTGCCAAGAGATGGATAATGTCATAACAGAGCTTCAAAAGCTATTCAATTCAGAAACTAATCATCATCATAATCATCTTCGTAAGTCCAAGCCAAACCTTGCTCTCTTCTTGTCAGGACTCAGCAAATACGAGATGTCTGAAACCAAAAAGTGTCCAAAGAGCATTGCGGTTTGGGAACTCTACCATATGCTTCTCAGGAAACGCCACTGGGCTTTGGTACACCACGCGGTTACTGCGTTTGGATACTTCTGTGCACGTACAAGCTGTAATCAGCTATGGAGATTCGTACCTGAAGACGCGGCTCTAGCCTTCGATATAGCTTCTGGAAAAGAAGCGAAAACAGAGCGGTTCATGTCGGAATTAAAGATGTTTTTGGAGAAAGAACAAGCGCTTCTTTCAATCACACCTTCAGAAGAAGAACTGGAGTTACTTTCGAAAGAAGGCACCGAGGTTAAGGCAACAGTGCAGAAGCTTCTAGAAGGAAGAAGCCAGAGGTCAATGGAAGTAGAGAAACGACCGAACAAGAAAAGGAAACTTCCAGAAGGAATTTGCAGAGGAATGGAGTTATTGCAGAATGGAGTGAAGAGGATTAACGAGGGTTTAAACGAATTGAGGTCAGATGAAAATGAGAGTGAAGAGTTTCAAAAGAGTTTATCGAATCAGTTTTCGTGTCTTGAAGATTTGGTCTCTCATTTGTTAAGCCTCACCGCAGCTTCGGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4487

Protein Analysis

997

Amino Acids

112.72

Weight (kDa)

5.85

Isoelectric Point (pI)

46.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4487 PF14868 256 - 849 3e-176 Domain of unknown function (DUF4487)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2714
AccB7I CCANNNNNTGG 1 cut(s) 2281
AccBSI CCGCTC 1 cut(s) 2617
AccII CGCG 3 cut(s) 79, 2498, 2570
AciI CCGC 7 cut(s) 79, 1116, 2438, 2498, 2570, 2617, 2979
AclI AACGTT 1 cut(s) 2209
AclWI GGATC 1 cut(s) 240
AcoI YGGCCR 1 cut(s) 768
AcsI RAATTY 9 cut(s) 106, 508, 977, 1202, 1241, 1954, 2027, 2047, 2817
AcuI CTGAAG 4 cut(s) 1467, 1619, 2583, 2664
AcyI GRCGYC 1 cut(s) 1028
AfaI GTAC 5 cut(s) 1750, 2177, 2490, 2530, 2559
AfeI AGCGCT 1 cut(s) 2661
AfiI CCNNNNNNNGG 2 cut(s) 229, 2281
AflIII ACRYGT 3 cut(s) 161, 306, 643
AjnI CCWGG 3 cut(s) 1023, 1353, 1607
Alw21I GWGCWC 3 cut(s) 1174, 2077, 2527
Alw26I GTCTC 4 cut(s) 336, 1572, 1984, 2962
Alw44I GTGCAC 2 cut(s) 1170, 2523
AlwI GGATC 1 cut(s) 240
AlwNI CAGNNNCTG 1 cut(s) 2093
Ama87I CYCGRG 1 cut(s) 1359
Aor51HI AGCGCT 1 cut(s) 2661
AoxI GGCC 3 cut(s) 236, 768, 1356
ApaLI GTGCAC 2 cut(s) 1170, 2523
ApeKI GCWGC 6 cut(s) 478, 743, 902, 1184, 1438, 2981
ApoI RAATTY 9 cut(s) 106, 508, 977, 1202, 1241, 1954, 2027, 2047, 2817
AseI ATTAAT 1 cut(s) 1737
Asp700I GAANNNNTTC 1 cut(s) 2910
AspLEI GCGC 2 cut(s) 1012, 2662
AspS9I GGNCC 1 cut(s) 1357
AsuHPI GGTGA 4 cut(s) 703, 937, 1420, 2968
AsuII TTCGAA 1 cut(s) 2705
AvaI CYCGRG 1 cut(s) 1359
BaeGI GKGCMC 2 cut(s) 1174, 2527
BaeI ACNNNNGTAYC 4 cut(s) 816, 849, 2506, 2539
BalI TGGCCA 1 cut(s) 770
BanI GGYRCC 1 cut(s) 2714
BanII GRGCYC 2 cut(s) 67, 2077
BarI GAAGNNNNNNTAC 2 cut(s) 2195, 2227
BbsI GAAGAC 2 cut(s) 638, 2571
Bbv12I GWGCWC 3 cut(s) 1174, 2077, 2527
BbvCI CCTCAGC 2 cut(s) 445, 906
BbvI GCAGC 5 cut(s) 490, 730, 889, 1196, 1425
BccI CCATC 6 cut(s) 655, 746, 1508, 1777, 1832, 2275
BciT130I CCWGG 3 cut(s) 1025, 1355, 1609
BciVI GTATCC 2 cut(s) 2100, 2507
BclI TGATCA 2 cut(s) 879, 1584
BcoDI GTCTC 4 cut(s) 336, 1572, 1984, 2962
BfaI CTAG 6 cut(s) 815, 1166, 1341, 1925, 2576, 2747
BfmI CTRYAG 1 cut(s) 1155
BfoI RGCGCY 2 cut(s) 1013, 2663
BfuI GTATCC 2 cut(s) 2100, 2507
BglII AGATCT 2 cut(s) 1159, 1898
BisI GCNGC 8 cut(s) 80, 479, 744, 903, 1185, 1439, 2571, 2982
BlsI GCNGC 8 cut(s) 81, 480, 745, 904, 1186, 1440, 2572, 2983
Bme1390I CCNGG 3 cut(s) 1025, 1355, 1609
BmeT110I CYCGRG 1 cut(s) 1359
BmgT120I GGNCC 1 cut(s) 1357
BmiI GGNNCC 1 cut(s) 2716
BmrFI CCNGG 3 cut(s) 1025, 1355, 1609
BmrI ACTGGG 1 cut(s) 2488
BmsI GCATC 5 cut(s) 430, 1068, 1402, 1657, 2125
BmuI ACTGGG 1 cut(s) 2488
BpiI GAAGAC 2 cut(s) 638, 2571
BplI GAGNNNNNCTC 4 cut(s) 1335, 1367, 1463, 1495
BpmI CTGGAG 4 cut(s) 1163, 2038, 2061, 2714
Bpu10I CCTNAGC 2 cut(s) 445, 906
Bpu14I TTCGAA 1 cut(s) 2705
BpuEI CTTGAG 3 cut(s) 318, 382, 2233
BsaAI YACGTR 1 cut(s) 2528
BsaBI GATNNNNATC 2 cut(s) 1532, 1920
BsaHI GRCGYC 1 cut(s) 1028
BsaI GGTCTC 1 cut(s) 2962
BsaJI CCNNGG 5 cut(s) 321, 534, 1041, 1608, 2718
BsaXI ACNNNNNCTCC 4 cut(s) 2064, 2094, 2168, 2198
Bsc4I CCNNNNNNNGG 2 cut(s) 229, 2281
Bse1I ACTGG 4 cut(s) 1375, 2078, 2483, 2697
Bse3DI GCAATG 4 cut(s) 803, 1448, 1928, 2433
Bse8I GATNNNNATC 2 cut(s) 1532, 1920
BseBI CCWGG 3 cut(s) 1025, 1355, 1609
BseDI CCNNGG 5 cut(s) 321, 534, 1041, 1608, 2718
BseGI GGATG 2 cut(s) 666, 1648
BseJI GATNNNNATC 2 cut(s) 1532, 1920
BseLI CCNNNNNNNGG 2 cut(s) 229, 2281
BseMI GCAATG 4 cut(s) 803, 1448, 1928, 2433
BseNI ACTGG 4 cut(s) 1375, 2078, 2483, 2697
BseRI GAGGAG 1 cut(s) 341
BseSI GKGCMC 2 cut(s) 1174, 2527
BseXI GCAGC 5 cut(s) 490, 730, 889, 1196, 1425
BseYI CCCAGC 1 cut(s) 706
BsgI GTGCAG 1 cut(s) 2756
Bsh1236I CGCG 3 cut(s) 79, 2498, 2570
Bsh1285I CGRYCG 1 cut(s) 2789
BshFI GGCC 3 cut(s) 238, 770, 1358
BshNI GGYRCC 1 cut(s) 2714
BsiEI CGRYCG 1 cut(s) 2789
BsiHKAI GWGCWC 3 cut(s) 1174, 2077, 2527
BsiHKCI CYCGRG 1 cut(s) 1359
BslI CCNNNNNNNGG 2 cut(s) 229, 2281
BsmAI GTCTC 4 cut(s) 336, 1572, 1984, 2962
BsmI GAATGC 2 cut(s) 16, 346
BsnI GGCC 3 cut(s) 238, 770, 1358
Bso31I GGTCTC 1 cut(s) 2962
BsoBI CYCGRG 1 cut(s) 1359
Bsp119I TTCGAA 1 cut(s) 2705
Bsp1286I GDGCHC 4 cut(s) 67, 1174, 2077, 2527
Bsp1407I TGTACA 1 cut(s) 1748
Bsp143I GATC 9 cut(s) 33, 46, 232, 879, 1068, 1135, 1159, 1584, 1898
Bsp19I CCATGG 1 cut(s) 321
BspACI CCGC 7 cut(s) 79, 1116, 2438, 2498, 2570, 2617, 2979
BspANI GGCC 3 cut(s) 238, 770, 1358
BspFNI CGCG 3 cut(s) 79, 2498, 2570
BspHI TCATGA 2 cut(s) 429, 1383
BspLI GGNNCC 1 cut(s) 2716
BspPI GGATC 1 cut(s) 240
BspQI GCTCTTC 2 cut(s) 336, 1608
BspT104I TTCGAA 1 cut(s) 2705
BspT107I GGYRCC 1 cut(s) 2714
BspTNI GGTCTC 1 cut(s) 2962
BsrBI CCGCTC 1 cut(s) 2617
BsrDI GCAATG 4 cut(s) 803, 1448, 1928, 2433
BsrGI TGTACA 1 cut(s) 1748
BsrI ACTGG 4 cut(s) 1375, 2078, 2483, 2697
BssECI CCNNGG 5 cut(s) 321, 534, 1041, 1608, 2718
BssMI GATC 9 cut(s) 33, 46, 232, 879, 1068, 1135, 1159, 1584, 1898
BssNI GRCGYC 1 cut(s) 1028
BssT1I CCWWGG 2 cut(s) 321, 1041
Bst2UI CCWGG 3 cut(s) 1025, 1355, 1609
Bst6I CTCTTC 9 cut(s) 24, 96, 336, 1486, 1600, 1608, 2381, 2849, 2901
BstACI GRCGYC 1 cut(s) 1028
BstAPI GCANNNNNTGC 1 cut(s) 1421
BstAUI TGTACA 1 cut(s) 1748
BstBAI YACGTR 1 cut(s) 2528
BstBI TTCGAA 1 cut(s) 2705
BstC8I GCNNGC 3 cut(s) 741, 1422, 2098
BstDSI CCRYGG 1 cut(s) 321
BstF5I GGATG 2 cut(s) 666, 1648
BstFNI CGCG 3 cut(s) 79, 2498, 2570
BstH2I RGCGCY 2 cut(s) 1013, 2663
BstHHI GCGC 2 cut(s) 1012, 2662
BstKTI GATC 9 cut(s) 36, 49, 235, 882, 1071, 1138, 1162, 1587, 1901
BstMAI GTCTC 4 cut(s) 336, 1572, 1984, 2962
BstMBI GATC 9 cut(s) 33, 46, 232, 879, 1068, 1135, 1159, 1584, 1898
BstMCI CGRYCG 1 cut(s) 2789
BstMWI GCNNNNNNNGC 8 cut(s) 908, 950, 1337, 1421, 1444, 2308, 2504, 2576
BstNI CCWGG 3 cut(s) 1025, 1355, 1609
BstNSI RCATGY 3 cut(s) 165, 310, 647
BstSCI CCNGG 3 cut(s) 1023, 1353, 1607
BstSFI CTRYAG 1 cut(s) 1155
BstSLI GKGCMC 2 cut(s) 1174, 2527
BstUI CGCG 3 cut(s) 79, 2498, 2570
BstV1I GCAGC 5 cut(s) 490, 730, 889, 1196, 1425
BstV2I GAAGAC 2 cut(s) 638, 2571
BstX2I RGATCY 2 cut(s) 1159, 1898
BstYI RGATCY 2 cut(s) 1159, 1898
BsuI GTATCC 2 cut(s) 2100, 2507
BsuRI GGCC 3 cut(s) 238, 770, 1358
BtgI CCRYGG 1 cut(s) 321
BtgZI GCGATG 1 cut(s) 29
BtsCI GGATG 2 cut(s) 666, 1648
BtsIMutI CAGTG 9 cut(s) 612, 875, 1088, 1172, 1710, 1949, 2221, 2476, 2739
Cac8I GCNNGC 3 cut(s) 741, 1422, 2098
CaiI CAGNNNCTG 1 cut(s) 2093
CciI TCATGA 2 cut(s) 429, 1383
CfoI GCGC 2 cut(s) 1012, 2662
Cfr13I GGNCC 1 cut(s) 1357
CseI GACGC 3 cut(s) 1017, 1991, 2576
Csp6I GTAC 5 cut(s) 1749, 2176, 2489, 2529, 2558
CviQI GTAC 5 cut(s) 1749, 2176, 2489, 2529, 2558
DpnI GATC 9 cut(s) 35, 48, 234, 881, 1070, 1137, 1161, 1586, 1900
DpnII GATC 9 cut(s) 33, 46, 232, 879, 1068, 1135, 1159, 1584, 1898
DraI TTTAAA 2 cut(s) 303, 2874
EaeI YGGCCR 1 cut(s) 768
Eam1104I CTCTTC 9 cut(s) 24, 96, 336, 1486, 1600, 1608, 2381, 2849, 2901
EarI CTCTTC 9 cut(s) 24, 96, 336, 1486, 1600, 1608, 2381, 2849, 2901
Ecl136II GAGCTC 1 cut(s) 2075
Eco130I CCWWGG 2 cut(s) 321, 1041
Eco24I GRGCYC 2 cut(s) 67, 2077
Eco31I GGTCTC 1 cut(s) 2962
Eco32I GATATC 1 cut(s) 1306
Eco47III AGCGCT 1 cut(s) 2661
Eco53kI GAGCTC 1 cut(s) 2075
Eco57I CTGAAG 4 cut(s) 1467, 1619, 2583, 2664
Eco88I CYCGRG 1 cut(s) 1359
EcoICRI GAGCTC 1 cut(s) 2075
EcoRI GAATTC 4 cut(s) 106, 508, 1202, 1241
EcoRII CCWGG 3 cut(s) 1023, 1353, 1607
EcoRV GATATC 1 cut(s) 1306
EcoT14I CCWWGG 2 cut(s) 321, 1041
EcoT22I ATGCAT 1 cut(s) 1061
EcoT38I GRGCYC 2 cut(s) 67, 2077
ErhI CCWWGG 2 cut(s) 321, 1041
FalI AAGNNNNNCTT 2 cut(s) 2649, 2681
FauNDI CATATG 1 cut(s) 2457
FbaI TGATCA 2 cut(s) 879, 1584
Fnu4HI GCNGC 8 cut(s) 80, 479, 744, 903, 1185, 1439, 2571, 2982
FokI GGATG 2 cut(s) 673, 1635
FriOI GRGCYC 2 cut(s) 67, 2077
Fsp4HI GCNGC 8 cut(s) 80, 479, 744, 903, 1185, 1439, 2571, 2982
FspBI CTAG 6 cut(s) 815, 1166, 1341, 1925, 2576, 2747
GlaI GCGC 2 cut(s) 1011, 2661
GluI GCNGC 8 cut(s) 80, 479, 744, 903, 1185, 1439, 2571, 2982
GsaI CCCAGC 1 cut(s) 710
GsuI CTGGAG 4 cut(s) 1163, 2038, 2061, 2714
HaeII RGCGCY 2 cut(s) 1013, 2663
HaeIII GGCC 3 cut(s) 238, 770, 1358
HgaI GACGC 3 cut(s) 1017, 1991, 2576
HhaI GCGC 2 cut(s) 1012, 2662
Hin1I GRCGYC 1 cut(s) 1028
Hin6I GCGC 2 cut(s) 1010, 2660
HinP1I GCGC 2 cut(s) 1010, 2660
HindIII AAGCTT 3 cut(s) 400, 1418, 2741
HphI GGTGA 4 cut(s) 703, 937, 1420, 2968
Hpy166II GTNNAC 6 cut(s) 641, 1172, 1477, 1873, 2491, 2525
Hpy8I GTNNAC 6 cut(s) 641, 1172, 1477, 1873, 2491, 2525
Hpy99I CGWCG 3 cut(s) 1985, 2162, 2203
HpyCH4IV ACGT 3 cut(s) 171, 2209, 2527
HpyF10VI GCNNNNNNNGC 8 cut(s) 908, 950, 1337, 1421, 1444, 2308, 2504, 2576
HpySE526I ACGT 3 cut(s) 171, 2209, 2527
Hsp92I GRCGYC 1 cut(s) 1028
HspAI GCGC 2 cut(s) 1010, 2660
Ksp22I TGATCA 2 cut(s) 879, 1584
Kzo9I GATC 9 cut(s) 33, 46, 232, 879, 1068, 1135, 1159, 1584, 1898
LguI GCTCTTC 2 cut(s) 336, 1608
LmnI GCTCC 3 cut(s) 1356, 2072, 2080
Lsp1109I GCAGC 5 cut(s) 490, 730, 889, 1196, 1425
LweI GCATC 5 cut(s) 430, 1068, 1402, 1657, 2125
MaeI CTAG 6 cut(s) 815, 1166, 1341, 1925, 2576, 2747
MaeII ACGT 3 cut(s) 171, 2209, 2527
MaeIII GTNAC 5 cut(s) 21, 451, 2210, 2500, 2697
MalI GATC 9 cut(s) 35, 48, 234, 881, 1070, 1137, 1161, 1586, 1900
MbiI CCGCTC 1 cut(s) 2617
MboI GATC 9 cut(s) 33, 46, 232, 879, 1068, 1135, 1159, 1584, 1898
MflI RGATCY 2 cut(s) 1159, 1898
MhlI GDGCHC 4 cut(s) 67, 1174, 2077, 2527
MlsI TGGCCA 1 cut(s) 770
MluNI TGGCCA 1 cut(s) 770
MlyI GAGTC 3 cut(s) 338, 881, 2382
MmeI TCCRAC 2 cut(s) 375, 2607
Mox20I TGGCCA 1 cut(s) 770
Mph1103I ATGCAT 1 cut(s) 1061
MroXI GAANNNNTTC 1 cut(s) 2910
MscI TGGCCA 1 cut(s) 770
MslI CAYNNNNRTG 1 cut(s) 1064
Msp20I TGGCCA 1 cut(s) 770
MspA1I CMGCKG 2 cut(s) 449, 1187
MspR9I CCNGG 3 cut(s) 1025, 1355, 1609
MssI GTTTAAAC 1 cut(s) 2874
Mva1269I GAATGC 2 cut(s) 16, 346
MvaI CCWGG 3 cut(s) 1025, 1355, 1609
MvnI CGCG 3 cut(s) 79, 2498, 2570
MwoI GCNNNNNNNGC 8 cut(s) 908, 950, 1337, 1421, 1444, 2308, 2504, 2576
NcoI CCATGG 1 cut(s) 321
NdeI CATATG 1 cut(s) 2457
NdeII GATC 9 cut(s) 33, 46, 232, 879, 1068, 1135, 1159, 1584, 1898
NlaIV GGNNCC 1 cut(s) 2716
NsiI ATGCAT 1 cut(s) 1061
NspI RCATGY 3 cut(s) 165, 310, 647
NspV TTCGAA 1 cut(s) 2705
PagI TCATGA 2 cut(s) 429, 1383
PciI ACATGT 3 cut(s) 161, 306, 643
PciSI GCTCTTC 2 cut(s) 336, 1608
PcsI WCGNNNNNNNCGW 1 cut(s) 2028
PctI GAATGC 2 cut(s) 16, 346
PdmI GAANNNNTTC 1 cut(s) 2910
PflMI CCANNNNNTGG 1 cut(s) 2281
PkrI GCNGC 8 cut(s) 81, 480, 745, 904, 1186, 1440, 2572, 2983
PleI GAGTC 3 cut(s) 337, 881, 2382
PmeI GTTTAAAC 1 cut(s) 2874
PpsI GAGTC 3 cut(s) 337, 881, 2382
Ppu21I YACGTR 1 cut(s) 2528
PscI ACATGT 3 cut(s) 161, 306, 643
PshBI ATTAAT 1 cut(s) 1737
Psp124BI GAGCTC 1 cut(s) 2077
Psp1406I AACGTT 1 cut(s) 2209
Psp6I CCWGG 3 cut(s) 1023, 1353, 1607
PspFI CCCAGC 1 cut(s) 706
PspGI CCWGG 3 cut(s) 1023, 1353, 1607
PspN4I GGNNCC 1 cut(s) 2716
PspPI GGNCC 1 cut(s) 1357
PsrI GAACNNNNNNTAC 2 cut(s) 2682, 2714
PstNI CAGNNNCTG 1 cut(s) 2093
PsuI RGATCY 2 cut(s) 1159, 1898
PvuII CAGCTG 2 cut(s) 449, 1187
RsaI GTAC 5 cut(s) 1750, 2177, 2490, 2530, 2559
RsaNI GTAC 5 cut(s) 1749, 2176, 2489, 2529, 2558
RseI CAYNNNNRTG 1 cut(s) 1064
SacI GAGCTC 1 cut(s) 2077
SapI GCTCTTC 2 cut(s) 336, 1608
SatI GCNGC 8 cut(s) 80, 479, 744, 903, 1185, 1439, 2571, 2982
Sau3AI GATC 9 cut(s) 33, 46, 232, 879, 1068, 1135, 1159, 1584, 1898
Sau96I GGNCC 1 cut(s) 1357
SchI GAGTC 3 cut(s) 338, 881, 2382
ScrFI CCNGG 3 cut(s) 1025, 1355, 1609
SduI GDGCHC 4 cut(s) 67, 1174, 2077, 2527
SfaNI GCATC 5 cut(s) 430, 1068, 1402, 1657, 2125
SfcI CTRYAG 1 cut(s) 1155
SfuI TTCGAA 1 cut(s) 2705
SmiMI CAYNNNNRTG 1 cut(s) 1064
SmlI CTYRAG 3 cut(s) 333, 397, 2248
SmoI CTYRAG 3 cut(s) 333, 397, 2248
SsiI CCGC 7 cut(s) 79, 1116, 2438, 2498, 2570, 2617, 2979
SspMI CTAG 6 cut(s) 815, 1166, 1341, 1925, 2576, 2747
SstI GAGCTC 1 cut(s) 2077
StyD4I CCNGG 3 cut(s) 1023, 1353, 1607
StyI CCWWGG 2 cut(s) 321, 1041
TaiI ACGT 3 cut(s) 174, 2212, 2530
TaqII GACCGA 1 cut(s) 2803
TatI WGTACW 2 cut(s) 1748, 2175
TauI GCSGC 2 cut(s) 82, 2573
TscAI CASTG 9 cut(s) 612, 882, 1095, 1179, 1717, 1956, 2221, 2483, 2739
TseI GCWGC 6 cut(s) 478, 743, 902, 1184, 1438, 2981
TspGWI ACGGA 2 cut(s) 962, 1789
TspRI CASTG 9 cut(s) 612, 882, 1095, 1179, 1717, 1956, 2221, 2483, 2739
Van91I CCANNNNNTGG 1 cut(s) 2281
VneI GTGCAC 2 cut(s) 1170, 2523
VspI ATTAAT 1 cut(s) 1737
XapI RAATTY 9 cut(s) 106, 508, 977, 1202, 1241, 1954, 2027, 2047, 2817
XbaI TCTAGA 1 cut(s) 2746
XceI RCATGY 3 cut(s) 165, 310, 647
XcmI CCANNNNNNNNNTGG 2 cut(s) 1103, 1717
XmnI GAANNNNTTC 1 cut(s) 2910
XspI CTAG 6 cut(s) 815, 1166, 1341, 1925, 2576, 2747
Zsp2I ATGCAT 1 cut(s) 1061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.