Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0006689

Physical Location & Seq

Genomic Coordinates Reverse (-)

4247276 .. 4253019

Gene Structure 5744 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G060300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3054 bp

ATGGAGGGAGGGAGCTCAAGCAGCGAATTGCAGAGTATAAAAGACGCCATTAGATGCTCAGATGTCGTGGAGAATCGTATTGAACTACTTACGAAGCTTGGGGATTTTAAAATAACAGAGAAATCTGAATTGGCTTCCCTTGCGGAATCTCTCACAACATTTTGGGAGGACTATACTTGCTTGGATATAAGCCAGTGCATGTTAAATGGGGCTATATTACAGGTGGCTGCAAAATACCTAGAATCTGATATATCCAACTGTCTAGCACATTTCCTTGCCCTTGGGACCAAGGCCAGCATATGGTGTGGTAAACACCTAAAAATGACTCTTATGTCGACTGAGGAGTCTCAAGAAGAAGAGCATGCCAACGTGTTCTTTGAGCTGCTTCTGAATCTGCTGAGCTTTTCTGGTGCTAGTTTTTCATTTTTGGAAAGATTCCCTGTTTCTGTTGACAAGCTGTCATTGGATATTGTTGAGAAATTCTTCGTGGAACAGTTAAACTTGATCAAAGATTCAATATCAGGGATTAAGAGAATTCAGTGCTTTGAATCAGTAGTAAAGGTCACACTGGGGGTCATTGATGCTGTAATAAGACTATGTGGAGCATACGCACGAGCTGTAAATTGGGAGTCCTGGGATGAAAAACTTGCAGGGGACAAAACTGGAATGGGTGTTGAAGGTTTCAGTAATATGAATCATGTTATTAATGTAACGAAGTATACAATAGAAAAATTGTGTGAGATAGGCATTGTTGCTGCTAAGAATGGGGGCAGTCTGGTAAAGGTTCTTAATTTTTCGTGGAAAGGTGTAGTTACTTTGCTTCAGCTTGGTGAGGGGGTACTTGCAACAAAGGTGAATGTAGCAGATATAATTTCAAATCTGATCTCATTGGTCAATGAATCGTTAAGATGTGCAGCTGAGGCTTGGTCATCGTCTCTGAAGGAAACCATTTCTGTGACAGAAGCTAGAAAGACATTTCTTCCAGTCAAGTTTTATCTGATTAATGCAATAAAAATATCTTCCCTGTATCCATGTCAAGCATATCTGGTACAAGGGGAGATAACAAATTGCATCCTAATGATCTCAACCTTTAAAATTTTATTGAGCAATGAAAAGCTCTTAAAAACTGCCGCTGATGTCTTCACCGAACTCTTGGAGAAAGCATCCTTGGATTTACTCATTTCTTTACTGAATTCATCTCAAATGAAGCAGGAGTTCAAGGGTGAGATTCTAGACTCTCTGTTCAGTAAAGGAAGCTACAGAGATACTGTTTCTGAAGATCTGAGTAAATTTAACAAGATAAGTTCATTGGATGAAATCTTTTCTTTATGTGGGGAAGCATTTCCTGGAGAAAAAGCCTTGTTGCTTGGTCGTGTTTCATTGTTTCTTGGTTTTTTGAAATTTTCTGTTGATCTTGAAGAAGATGTAAAACTTGGTATTACCAGAAAACTTGGTTGGTTCTTGGATATATTAATTGATGAAGATGTATATGCTTCCATTTTGCTTTTGCAAGTTCCTGGGTTATACGGGTCTGGAGAAACTGTGGAAGTTGTCTGGCAGCCTATGTTTTCTTTTCTTTTGAATGCATTGGAAATCTTCATGCTTGTGGTCTCTCCTAGTCCTGCTTGGAGTGAGTTGGAGTCTTTCCTTCTTGAGAATATATTTCATCCTCACTTTCTTTGCTGGGAAATTGTGATGGAACTTTGGTGCTTTATGCTGCGTTATGCTGAGCCAGGGATGGCGAGTGGCATTATTGGTAAACTCTGCTCATTATTAAAGTTTGTGGCATCTGCTGAATCAGTTCTTGTACCTGGTTCTGCTCTGAGAAAATTGGCAAGATCAATCAGCATGCTTCTTACTTTTGGTGCACAAGCTATGGTAGACCAGGTTTACAAGTCCATTGTTAGTGATGATGGAGCTCAATTATCGTCAGTTATGCGTTTGGCCTTGTTCATGGAAGGCTTTCCATTAAATTTACTCTCAGACAAGATGAAAAGTATAGCAACTCATAGAATCATTACTGATTACTATGTCTTCGTAGAAAATTTTGATGACAAGTCGATGAGATCTTTCCATTCCGGTGCTTTTGGGGTCCCAGTCTTTGCTTTGTCTGCTTCTTTGCAGTCTCTCCCGATCAGCATATCTGATATCGATGTGAAGACCCTGAAGTTTTTAGTTGCTATCATTCATAACTACAGAGTTTCCTCAGATAAATTAATGAAGGAGCACTACTCCAAACTTTTGAGTGAAACATTGGGGATCATCTCAAAAATGAACCATTTATATGCTTCTGACGAAATGGAGAAAGTAATCTTTGAGCTCGAAAACCTGTTTATCTCAGGACCTGCAGCTTCTGATACCCAATTGTATGAATGCAAACCAAATCTGGCTCTTTTCATGGCAGGCCTTGCTCATATGGAAATCAATGAAACTAATCAAAGTGCCAAGACCTCTGCTCTGTGGGAGTTGTATCACATGTTGTTGAGAGAACGGCATTGGGCATTTATTCATTTGGCCATTGCAGCATTTGGATATTTTTCTGCTCGGACATGTTGCAATGAACTTTGGAGATTTGTTCCGCAAGATGCAGCGCTTTCATACGATTTAGTATCTGCAAATGAGGCAAGCGTGGAGAGATTCATGTCTCAGTTTAAGATATTTCTTGAGAAGGAAACAGCGCTTCTTGCAATGACGCCTAGCTCTGACCAGCTTGGTCTGCTTGTGAGGGAGGGCCTAACTCTGAAAAAAATGTTTCAAAAGAAATCAAATGTCATTCCAGAGACTACGGAATGTGAAAACATGGAAATCGACTGCAAAAAGCAAACGGGGGAGATTAATGGTGGAAAGCAAACCAATAAGAAAAGGAAACTTCCGGATGGAATTAGGAAGGGAATGGAATTGGTAGAGAGTGGTATGAAGGTCATTGTTGATGGTATTTCTCAGTGGCAGCAAATTCAATCCGGCTCGGATGAACTTCATAAAAAGTTCTTGTCTAACTTTTCTCGCCTTGAAGATGAAGTTGCTCAACTAATTGGCCTGGCTGGTACTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4487

Protein Analysis

1018

Amino Acids

113.38

Weight (kDa)

5.2

Isoelectric Point (pI)

32.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006689)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04650 AT1G04650
fragaria_vesca	FvH4_4g05680 FvH4_4g05680 FvH4_4g05680 FvH4_4g05680 FvH4_4g05680 FvH4_4g05680 FvH4_4g05680 FvH4_4g05680
malus_domestica	MD00G1101100.v1.1
prunus_persica	Prupe.1G060300_v2.0.a1
pyrus_communis	pycom13g20320 pycom16g19820
rosa_chinensis	RchiOBHm_Chr4g0396881
rosa_laevigata	RLG00000009497
rosa_multiflora	Rmu_sc0000487.1_g000079
rosa_roxburghii	Rroxscaffold_5G00341740 Rroxscaffold_5G00341750
rosa_rugosa	Rorug03G0346800
rosa_samantha	Rh4AG072600 Rh4AG074000 Rh4BG071000 Rh4CG079100 Rh4DG068400
rosa_wichuraiana	Rw4G005980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	331, 343
Acc36I	ACCTGC	1 cut(s)	2353
AccB7I	CCANNNNNTGG	1 cut(s)	300
AccI	GTMKAC	3 cut(s)	335, 719, 1881
AccIII	TCCGGA	1 cut(s)	2872
AciI	CCGC	3 cut(s)	143, 1131, 2579
AclWI	GGATC	1 cut(s)	2267
AcoI	YGGCCR	1 cut(s)	2514
AcsI	RAATTY	9 cut(s)	479, 534, 1095, 1192, 1289, 1400, 1972, 2044, 2952
AcuI	CTGAAG	4 cut(s)	806, 959, 1296, 2186
AcyI	GRCGYC	2 cut(s)	45, 2693
AfaI	GTAC	4 cut(s)	840, 1050, 1809, 3046
AfeI	AGCGCT	2 cut(s)	2592, 2679
AfiI	CCNNNNNNNGG	1 cut(s)	300
AflIII	ACRYGT	3 cut(s)	369, 2475, 2549
AhdI	GACNNNNNGTC	1 cut(s)	457
AjnI	CCWGG	7 cut(s)	632, 1345, 1516, 1732, 1810, 1884, 3036
AjuI	GAANNNNNNNTTGG	6 cut(s)	113, 145, 1151, 1183, 1438, 1470
Alw21I	GWGCWC	5 cut(s)	17, 1870, 1921, 2229, 2322
Alw26I	GTCTC	6 cut(s)	351, 939, 1615, 2130, 2649, 2774
Alw44I	GTGCAC	1 cut(s)	1866
AlwI	GGATC	1 cut(s)	2267
AlwNI	CAGNNNCTG	2 cut(s)	2345, 2354
Aor13HI	TCCGGA	1 cut(s)	2872
Aor51HI	AGCGCT	2 cut(s)	2592, 2679
AoxI	GGCC	6 cut(s)	291, 1944, 2404, 2514, 2731, 3034
ApaLI	GTGCAC	1 cut(s)	1866
ApoI	RAATTY	9 cut(s)	479, 534, 1095, 1192, 1289, 1400, 1972, 2044, 2952
AseI	ATTAAT	5 cut(s)	705, 1002, 1472, 2216, 2835
Asp700I	GAANNNNTTC	4 cut(s)	482, 1341, 1800, 1962
AspLEI	GCGC	2 cut(s)	2593, 2680
AspS9I	GGNCC	4 cut(s)	285, 2092, 2342, 2731
AsuHPI	GGTGA	4 cut(s)	842, 865, 1135, 1235
AvaII	GGWCC	3 cut(s)	285, 2092, 2342
BaeGI	GKGCMC	1 cut(s)	1870
BalI	TGGCCA	1 cut(s)	2516
BanII	GRGCYC	3 cut(s)	17, 1921, 2322
BarI	GAAGNNNNNNTAC	2 cut(s)	2213, 2245
BauI	CACGAG	1 cut(s)	612
BbsI	GAAGAC	3 cut(s)	1132, 2026, 2165
Bbv12I	GWGCWC	5 cut(s)	17, 1870, 1921, 2229, 2322
BbvCI	CCTCAGC	1 cut(s)	918
BccI	CCATC	5 cut(s)	1690, 1732, 1907, 2870, 2924
BceAI	ACGGC	1 cut(s)	2507
BciT130I	CCWGG	7 cut(s)	634, 1347, 1518, 1734, 1812, 1886, 3038
BciVI	GTATCC	1 cut(s)	1038
BclI	TGATCA	1 cut(s)	504
BcoDI	GTCTC	6 cut(s)	351, 939, 1615, 2130, 2649, 2774
BfaI	CTAG	7 cut(s)	239, 263, 414, 966, 1232, 1617, 2697
BfmI	CTRYAG	3 cut(s)	1258, 2194, 2346
BfoI	RGCGCY	2 cut(s)	2594, 2681
BfuAI	ACCTGC	1 cut(s)	2353
BfuI	GTATCC	1 cut(s)	1038
BglII	AGATCT	2 cut(s)	1279, 2066
BlpI	GCTNAGC	2 cut(s)	398, 1728
Bme1390I	CCNGG	7 cut(s)	634, 1347, 1518, 1734, 1812, 1886, 3038
Bme18I	GGWCC	3 cut(s)	285, 2092, 2342
BmeRI	GACNNNNNGTC	1 cut(s)	457
BmgT120I	GGNCC	4 cut(s)	285, 2092, 2342, 2731
BmiI	GGNNCC	3 cut(s)	286, 2093, 2094
BmrFI	CCNGG	7 cut(s)	634, 1347, 1518, 1734, 1812, 1886, 3038
BmrI	ACTGGG	2 cut(s)	578, 2090
BmsI	GCATC	6 cut(s)	44, 571, 1080, 1172, 1796, 2575
BmuI	ACTGGG	2 cut(s)	578, 2090
BpiI	GAAGAC	3 cut(s)	1132, 2026, 2165
BplI	GAGNNNNNCTC	2 cut(s)	2216, 2248
BpmI	CTGGAG	2 cut(s)	1368, 1554
Bpu10I	CCTNAGC	1 cut(s)	918
Bpu1102I	GCTNAGC	2 cut(s)	398, 1728
BpuEI	CTTGAG	3 cut(s)	333, 1673, 2684
Bsa29I	ATCGAT	1 cut(s)	2151
BsaHI	GRCGYC	2 cut(s)	45, 2693
BsaI	GGTCTC	1 cut(s)	1615
BsaJI	CCNNGG	6 cut(s)	280, 288, 633, 1167, 1517, 1733
BsaWI	WCCGGW	2 cut(s)	2078, 2872
BsaXI	ACNNNNNCTCC	2 cut(s)	1527, 1557
Bsc4I	CCNNNNNNNGG	1 cut(s)	300
Bse1I	ACTGG	5 cut(s)	193, 573, 667, 983, 2096
Bse3DI	GCAATG	4 cut(s)	1114, 2517, 2563, 2694
BseAI	TCCGGA	1 cut(s)	2872
BseBI	CCWGG	7 cut(s)	634, 1347, 1518, 1734, 1812, 1886, 3038
BseCI	ATCGAT	1 cut(s)	2151
BseDI	CCNNGG	6 cut(s)	280, 288, 633, 1167, 1517, 1733
BseGI	GGATG	8 cut(s)	643, 1071, 1163, 1318, 1666, 1743, 2881, 2974
BseLI	CCNNNNNNNGG	1 cut(s)	300
BseMI	GCAATG	4 cut(s)	1114, 2517, 2563, 2694
BseNI	ACTGG	5 cut(s)	193, 573, 667, 983, 2096
BseRI	GAGGAG	1 cut(s)	356
BseSI	GKGCMC	1 cut(s)	1870
BseYI	CCCAGC	1 cut(s)	1683
BsgI	GTGCAG	1 cut(s)	933
BshFI	GGCC	6 cut(s)	293, 1946, 2406, 2516, 2733, 3036
BshVI	ATCGAT	1 cut(s)	2151
BsiHKAI	GWGCWC	5 cut(s)	17, 1870, 1921, 2229, 2322
BsiSI	CCGG	3 cut(s)	2079, 2873, 2961
BslFI	GGGAC	3 cut(s)	298, 668, 2078
BslI	CCNNNNNNNGG	1 cut(s)	300
BsmAI	GTCTC	6 cut(s)	351, 939, 1615, 2130, 2649, 2774
BsmBI	CGTCTC	1 cut(s)	939
BsmFI	GGGAC	3 cut(s)	298, 668, 2078
BsmI	GAATGC	2 cut(s)	1588, 2378
BsnI	GGCC	6 cut(s)	293, 1946, 2406, 2516, 2733, 3036
Bso31I	GGTCTC	1 cut(s)	1615
Bsp1286I	GDGCHC	5 cut(s)	17, 1870, 1921, 2229, 2322
Bsp13I	TCCGGA	1 cut(s)	2872
Bsp143I	GATC	9 cut(s)	504, 882, 1080, 1279, 1411, 1838, 2066, 2133, 2259
Bsp1720I	GCTNAGC	2 cut(s)	398, 1728
BspACI	CCGC	3 cut(s)	143, 1131, 2579
BspANI	GGCC	6 cut(s)	293, 1946, 2406, 2516, 2733, 3036
BspDI	ATCGAT	1 cut(s)	2151
BspEI	TCCGGA	1 cut(s)	2872
BspLI	GGNNCC	3 cut(s)	286, 2093, 2094
BspMAI	CTGCAG	1 cut(s)	2350
BspMI	ACCTGC	1 cut(s)	2353
BspPI	GGATC	1 cut(s)	2267
BspQI	GCTCTTC	1 cut(s)	351
BspTNI	GGTCTC	1 cut(s)	1615
BsrDI	GCAATG	4 cut(s)	1114, 2517, 2563, 2694
BsrI	ACTGG	5 cut(s)	193, 573, 667, 983, 2096
BssECI	CCNNGG	6 cut(s)	280, 288, 633, 1167, 1517, 1733
BssMI	GATC	9 cut(s)	504, 882, 1080, 1279, 1411, 1838, 2066, 2133, 2259
BssNAI	GTATAC	1 cut(s)	720
BssNI	GRCGYC	2 cut(s)	45, 2693
BssSI	CACGAG	1 cut(s)	612
BssT1I	CCWWGG	3 cut(s)	280, 288, 1167
Bst1107I	GTATAC	1 cut(s)	720
Bst2BI	CACGAG	1 cut(s)	612
Bst2UI	CCWGG	7 cut(s)	634, 1347, 1518, 1734, 1812, 1886, 3038
Bst4CI	ACNGT	4 cut(s)	260, 495, 1270, 1543
Bst6I	CTCTTC	1 cut(s)	351
BstACI	GRCGYC	2 cut(s)	45, 2693
BstAPI	GCANNNNNTGC	1 cut(s)	2408
BstC8I	GCNNGC	5 cut(s)	295, 363, 1850, 2404, 2626
BstF5I	GGATG	8 cut(s)	643, 1071, 1163, 1318, 1666, 1743, 2881, 2974
BstH2I	RGCGCY	2 cut(s)	2594, 2681
BstHHI	GCGC	2 cut(s)	2593, 2680
BstKTI	GATC	9 cut(s)	507, 885, 1083, 1282, 1414, 1841, 2069, 2136, 2262
BstMAI	GTCTC	6 cut(s)	351, 939, 1615, 2130, 2649, 2774
BstMBI	GATC	9 cut(s)	504, 882, 1080, 1279, 1411, 1838, 2066, 2133, 2259
BstMWI	GCNNNNNNNGC	9 cut(s)	21, 140, 920, 2111, 2408, 2522, 2621, 2684, 2716
BstNI	CCWGG	7 cut(s)	634, 1347, 1518, 1734, 1812, 1886, 3038
BstNSI	RCATGY	5 cut(s)	202, 365, 1852, 2479, 2553
BstSCI	CCNGG	7 cut(s)	632, 1345, 1516, 1732, 1810, 1884, 3036
BstSFI	CTRYAG	3 cut(s)	1258, 2194, 2346
BstSLI	GKGCMC	1 cut(s)	1870
BstV2I	GAAGAC	3 cut(s)	1132, 2026, 2165
BstX2I	RGATCY	2 cut(s)	1279, 2066
BstYI	RGATCY	2 cut(s)	1279, 2066
BstZ17I	GTATAC	1 cut(s)	720
Bsu15I	ATCGAT	1 cut(s)	2151
BsuI	GTATCC	1 cut(s)	1038
BsuRI	GGCC	6 cut(s)	293, 1946, 2406, 2516, 2733, 3036
BsuTUI	ATCGAT	1 cut(s)	2151
BtsCI	GGATG	8 cut(s)	643, 1071, 1163, 1318, 1666, 1743, 2881, 2974
BtsIMutI	CAGTG	4 cut(s)	200, 545, 566, 2948
BveI	ACCTGC	1 cut(s)	2353
Cac8I	GCNNGC	5 cut(s)	295, 363, 1850, 2404, 2626
CaiI	CAGNNNCTG	2 cut(s)	2345, 2354
CfoI	GCGC	2 cut(s)	2593, 2680
Cfr13I	GGNCC	4 cut(s)	285, 2092, 2342, 2731
ClaI	ATCGAT	1 cut(s)	2151
CseI	GACGC	2 cut(s)	53, 2701
CsiI	ACCWGGT	2 cut(s)	1810, 1884
Csp6I	GTAC	4 cut(s)	839, 1049, 1808, 3045
CviQI	GTAC	4 cut(s)	839, 1049, 1808, 3045
DpnI	GATC	9 cut(s)	506, 884, 1082, 1281, 1413, 1840, 2068, 2135, 2261
DpnII	GATC	9 cut(s)	504, 882, 1080, 1279, 1411, 1838, 2066, 2133, 2259
DraI	TTTAAA	2 cut(s)	109, 1093
DrdI	GACNNNNNNGTC	2 cut(s)	331, 343
DriI	GACNNNNNGTC	1 cut(s)	457
DseDI	GACNNNNNNGTC	2 cut(s)	331, 343
EaeI	YGGCCR	1 cut(s)	2514
Eam1104I	CTCTTC	1 cut(s)	351
Eam1105I	GACNNNNNGTC	1 cut(s)	457
EarI	CTCTTC	1 cut(s)	351
Ecl136II	GAGCTC	3 cut(s)	15, 1919, 2320
Eco130I	CCWWGG	3 cut(s)	280, 288, 1167
Eco147I	AGGCCT	1 cut(s)	2406
Eco24I	GRGCYC	3 cut(s)	17, 1921, 2322
Eco31I	GGTCTC	1 cut(s)	1615
Eco32I	GATATC	1 cut(s)	2149
Eco47I	GGWCC	3 cut(s)	285, 2092, 2342
Eco47III	AGCGCT	2 cut(s)	2592, 2679
Eco53kI	GAGCTC	3 cut(s)	15, 1919, 2320
Eco57I	CTGAAG	4 cut(s)	806, 959, 1296, 2186
EcoICRI	GAGCTC	3 cut(s)	15, 1919, 2320
EcoO109I	RGGNCCY	3 cut(s)	2092, 2342, 2731
EcoRI	GAATTC	2 cut(s)	534, 1192
EcoRII	CCWGG	7 cut(s)	632, 1345, 1516, 1732, 1810, 1884, 3036
EcoRV	GATATC	1 cut(s)	2149
EcoT14I	CCWWGG	3 cut(s)	280, 288, 1167
EcoT22I	ATGCAT	1 cut(s)	1588
EcoT38I	GRGCYC	3 cut(s)	17, 1921, 2322
ErhI	CCWWGG	3 cut(s)	280, 288, 1167
Esp3I	CGTCTC	1 cut(s)	939
FaqI	GGGAC	3 cut(s)	298, 668, 2078
FauNDI	CATATG	2 cut(s)	299, 2415
FbaI	TGATCA	1 cut(s)	504
FblI	GTMKAC	3 cut(s)	335, 719, 1881
FokI	GGATG	8 cut(s)	650, 1058, 1150, 1325, 1653, 1750, 2888, 2981
FriOI	GRGCYC	3 cut(s)	17, 1921, 2322
FspBI	CTAG	7 cut(s)	239, 263, 414, 966, 1232, 1617, 2697
GlaI	GCGC	2 cut(s)	2592, 2679
GsaI	CCCAGC	1 cut(s)	1687
GsuI	CTGGAG	2 cut(s)	1368, 1554
HaeII	RGCGCY	2 cut(s)	2594, 2681
HaeIII	GGCC	6 cut(s)	293, 1946, 2406, 2516, 2733, 3036
HapII	CCGG	3 cut(s)	2079, 2873, 2961
HgaI	GACGC	2 cut(s)	53, 2701
HhaI	GCGC	2 cut(s)	2593, 2680
Hin1I	GRCGYC	2 cut(s)	45, 2693
Hin6I	GCGC	2 cut(s)	2591, 2678
HinP1I	GCGC	2 cut(s)	2591, 2678
HincII	GTYRAC	2 cut(s)	336, 451
HindII	GTYRAC	2 cut(s)	336, 451
HindIII	AAGCTT	1 cut(s)	95
HpaII	CCGG	3 cut(s)	2079, 2873, 2961
HphI	GGTGA	4 cut(s)	842, 865, 1135, 1235
Hpy166II	GTNNAC	8 cut(s)	311, 336, 451, 720, 1760, 1868, 1882, 1891
Hpy8I	GTNNAC	8 cut(s)	311, 336, 451, 720, 1760, 1868, 1882, 1891
HpyAV	CCTTC	8 cut(s)	671, 934, 1658, 1952, 2215, 2662, 2881, 2911
HpyCH4III	ACNGT	4 cut(s)	260, 495, 1270, 1543
HpyCH4IV	ACGT	1 cut(s)	369
HpyF10VI	GCNNNNNNNGC	9 cut(s)	21, 140, 920, 2111, 2408, 2522, 2621, 2684, 2716
HpySE526I	ACGT	1 cut(s)	369
Hsp92I	GRCGYC	2 cut(s)	45, 2693
HspAI	GCGC	2 cut(s)	2591, 2678
KflI	GGGWCCC	1 cut(s)	2092
Kpn2I	TCCGGA	1 cut(s)	2872
Ksp22I	TGATCA	1 cut(s)	504
Kzo9I	GATC	9 cut(s)	504, 882, 1080, 1279, 1411, 1838, 2066, 2133, 2259
LguI	GCTCTTC	1 cut(s)	351
LmnI	GCTCC	4 cut(s)	12, 602, 1916, 2224
LweI	GCATC	6 cut(s)	44, 571, 1080, 1172, 1796, 2575
MabI	ACCWGGT	2 cut(s)	1810, 1884
MaeI	CTAG	7 cut(s)	239, 263, 414, 966, 1232, 1617, 2697
MaeII	ACGT	1 cut(s)	369
MaeIII	GTNAC	4 cut(s)	562, 709, 811, 955
MalI	GATC	9 cut(s)	506, 884, 1082, 1281, 1413, 1840, 2068, 2135, 2261
MboI	GATC	9 cut(s)	504, 882, 1080, 1279, 1411, 1838, 2066, 2133, 2259
MfeI	CAATTG	1 cut(s)	2363
MflI	RGATCY	2 cut(s)	1279, 2066
MhlI	GDGCHC	5 cut(s)	17, 1870, 1921, 2229, 2322
MlsI	TGGCCA	1 cut(s)	2516
MluNI	TGGCCA	1 cut(s)	2516
MlyI	GAGTC	5 cut(s)	319, 353, 638, 1229, 1649
MmeI	TCCRAC	2 cut(s)	279, 1617
Mox20I	TGGCCA	1 cut(s)	2516
Mph1103I	ATGCAT	1 cut(s)	1588
MroI	TCCGGA	1 cut(s)	2872
MroXI	GAANNNNTTC	4 cut(s)	482, 1341, 1800, 1962
MscI	TGGCCA	1 cut(s)	2516
MslI	CAYNNNNRTG	5 cut(s)	953, 1076, 1604, 2079, 2283
Msp20I	TGGCCA	1 cut(s)	2516
MspA1I	CMGCKG	2 cut(s)	917, 1133
MspI	CCGG	3 cut(s)	2079, 2873, 2961
MspR9I	CCNGG	7 cut(s)	634, 1347, 1518, 1734, 1812, 1886, 3038
MunI	CAATTG	1 cut(s)	2363
Mva1269I	GAATGC	2 cut(s)	1588, 2378
MvaI	CCWGG	7 cut(s)	634, 1347, 1518, 1734, 1812, 1886, 3038
MwoI	GCNNNNNNNGC	9 cut(s)	21, 140, 920, 2111, 2408, 2522, 2621, 2684, 2716
NdeI	CATATG	2 cut(s)	299, 2415
NdeII	GATC	9 cut(s)	504, 882, 1080, 1279, 1411, 1838, 2066, 2133, 2259
NlaIV	GGNNCC	3 cut(s)	286, 2093, 2094
NmuCI	GTSAC	2 cut(s)	562, 955
NsiI	ATGCAT	1 cut(s)	1588
NspI	RCATGY	5 cut(s)	202, 365, 1852, 2479, 2553
PaeI	GCATGC	2 cut(s)	365, 1852
PceI	AGGCCT	1 cut(s)	2406
PciI	ACATGT	2 cut(s)	2475, 2549
PciSI	GCTCTTC	1 cut(s)	351
PctI	GAATGC	2 cut(s)	1588, 2378
PdmI	GAANNNNTTC	4 cut(s)	482, 1341, 1800, 1962
PflMI	CCANNNNNTGG	1 cut(s)	300
PfoI	TCCNGGA	1 cut(s)	1345
PleI	GAGTC	5 cut(s)	319, 352, 637, 1229, 1648
PpsI	GAGTC	5 cut(s)	319, 352, 637, 1229, 1648
PpuMI	RGGWCCY	2 cut(s)	2092, 2342
PscI	ACATGT	2 cut(s)	2475, 2549
PshBI	ATTAAT	5 cut(s)	705, 1002, 1472, 2216, 2835
Psp124BI	GAGCTC	3 cut(s)	17, 1921, 2322
Psp5II	RGGWCCY	2 cut(s)	2092, 2342
Psp6I	CCWGG	7 cut(s)	632, 1345, 1516, 1732, 1810, 1884, 3036
PspFI	CCCAGC	1 cut(s)	1683
PspGI	CCWGG	7 cut(s)	632, 1345, 1516, 1732, 1810, 1884, 3036
PspN4I	GGNNCC	3 cut(s)	286, 2093, 2094
PspPI	GGNCC	4 cut(s)	285, 2092, 2342, 2731
PspPPI	RGGWCCY	2 cut(s)	2092, 2342
PstI	CTGCAG	1 cut(s)	2350
PstNI	CAGNNNCTG	2 cut(s)	2345, 2354
PsuI	RGATCY	2 cut(s)	1279, 2066
PvuII	CAGCTG	1 cut(s)	917
RsaI	GTAC	4 cut(s)	840, 1050, 1809, 3046
RsaNI	GTAC	4 cut(s)	839, 1049, 1808, 3045
RseI	CAYNNNNRTG	5 cut(s)	953, 1076, 1604, 2079, 2283
SacI	GAGCTC	3 cut(s)	17, 1921, 2322
SalI	GTCGAC	1 cut(s)	334
SapI	GCTCTTC	1 cut(s)	351
Sau3AI	GATC	9 cut(s)	504, 882, 1080, 1279, 1411, 1838, 2066, 2133, 2259
Sau96I	GGNCC	4 cut(s)	285, 2092, 2342, 2731
SchI	GAGTC	5 cut(s)	319, 353, 638, 1229, 1649
ScrFI	CCNGG	7 cut(s)	634, 1347, 1518, 1734, 1812, 1886, 3038
SduI	GDGCHC	5 cut(s)	17, 1870, 1921, 2229, 2322
SexAI	ACCWGGT	2 cut(s)	1810, 1884
SfaNI	GCATC	6 cut(s)	44, 571, 1080, 1172, 1796, 2575
SfcI	CTRYAG	3 cut(s)	1258, 2194, 2346
SinI	GGWCC	3 cut(s)	285, 2092, 2342
SmiMI	CAYNNNNRTG	5 cut(s)	953, 1076, 1604, 2079, 2283
SmlI	CTYRAG	4 cut(s)	16, 348, 1652, 2663
SmoI	CTYRAG	4 cut(s)	16, 348, 1652, 2663
SphI	GCATGC	2 cut(s)	365, 1852
SseBI	AGGCCT	1 cut(s)	2406
SsiI	CCGC	3 cut(s)	143, 1131, 2579
SspMI	CTAG	7 cut(s)	239, 263, 414, 966, 1232, 1617, 2697
SstI	GAGCTC	3 cut(s)	17, 1921, 2322
StuI	AGGCCT	1 cut(s)	2406
StyD4I	CCNGG	7 cut(s)	632, 1345, 1516, 1732, 1810, 1884, 3036
StyI	CCWWGG	3 cut(s)	280, 288, 1167
TaaI	ACNGT	4 cut(s)	260, 495, 1270, 1543
TaiI	ACGT	1 cut(s)	372
TaqI	TCGA	5 cut(s)	335, 2060, 2151, 2322, 2808
TauI	GCSGC	1 cut(s)	1133
TscAI	CASTG	4 cut(s)	200, 545, 573, 2948
TseFI	GTSAC	2 cut(s)	562, 955
Tsp45I	GTSAC	2 cut(s)	562, 955
TspGWI	ACGGA	1 cut(s)	2801
TspRI	CASTG	4 cut(s)	200, 545, 573, 2948
Van91I	CCANNNNNTGG	1 cut(s)	300
VneI	GTGCAC	1 cut(s)	1866
VpaK11BI	GGWCC	3 cut(s)	285, 2092, 2342
VspI	ATTAAT	5 cut(s)	705, 1002, 1472, 2216, 2835
XapI	RAATTY	9 cut(s)	479, 534, 1095, 1192, 1289, 1400, 1972, 2044, 2952
XbaI	TCTAGA	1 cut(s)	1231
XceI	RCATGY	5 cut(s)	202, 365, 1852, 2479, 2553
XmiI	GTMKAC	3 cut(s)	335, 719, 1881
XmnI	GAANNNNTTC	4 cut(s)	482, 1341, 1800, 1962
XspI	CTAG	7 cut(s)	239, 263, 414, 966, 1232, 1617, 2697
Zsp2I	ATGCAT	1 cut(s)	1588

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.