Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000487.1

Orthogroup ID

OG0006689

Physical Location & Seq

Genomic Coordinates Reverse (-)

331600 .. 338006

Gene Structure 6407 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000487.1_g000079.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2955 bp

atggagggagggagctcagaattgcagagcatacaagacgccatcagatcctcagatgtggtggagaatcggattgaattacttaagaagcttggcgatttgaaaataacagagaagtctgaattggcttcccttgccgagtgtttgacagtggctgcgaagcacctagaatcagacacatccaactgtctagcacatttccttgtccttgggaccaaggcaagcatatggtgtggaaagcacctaaaaatgactcttatgtcaaccgaggaatctcaagaagaagagcacgagaacctgttctttcagctgtttctggatctgctgagctttttgagggcttgcttttcagctttggcaagataccctgtttctgttgagaagatgacagtggatgtagttgaaacattctttgatgaagagttaaacttgatcaaagattctatatcagagataaagagaattcagtcatttgtatcagaagaagtcgtagtaaaggttacacaggaggtcattgattctgtaataagattgtgtggagcatatgcccgagctttgaattgggagtcttgggaagaaaaactcgagagggataaaactgacatggactttgaaggggccaatagtatgaatcatgttattaatgtaacaaagtgtacaatagaaaaactatgtgagatgggcattattgcagctaataatggcggaagtctggtaccgattattaatatgtcgtggaaaggtgtggtcactttgcttcagctcggtgatggggtattagcaacaaaggtgaatgtagcagctctaatatcaaatctaatctcattggttaatgaatctataagacatgcagctgaggcatggttttcatcactgaaggaaaacatctctgtgtcagaagctagaaaggcatttcttcctataaagttttatttggttaatgcagtaaaaatatcttccctatacccatatcaagcatatctggtgcaaagtgagataacaaaatgtatcctgatgatttcaaccttaaagatttcattgagcaatgaaaacctgttaaaaactgccagtgatgttttcacagaactcttggagaagacatccttggatttgcttattgctctactgaactcagttcaagtgaagcgggagctcaaggttgagattctagactatctcttcggtgaaggaagctgcacaaattctgttgatggagatccgactacatgtggggaagcattgcccggagaaaggaccttcttgattggccgtgtttcattgtttcttaattttctgagattttctctcgatcttgacgacgatgtaaagcttgggattgctggaaagcttggttggttctttgatatgttagtaaatgaagaggtatattcttccattcttcttttgcaagttcctgtgctatatggttctggaaaaactgtggaagttgtctggcaacctttgttttcttctcttttgaatgcattgcaaatctacatgcttgtcgtttcttctggtcctgcttggagggagctggagtcttttcttcttgagaatttatttcacccccactttctttgctgggagattgtaatggaactttggtgctttatggttcgccatgctgagtctgggatggtgagtggcattgctggtaaactttgctcattaatgaagttggtggcatctactgaatccgttcttgtagctgattctgctctgagaaaagtggcaaggtcaatcagcataattcttacttttggtgcacaatctatggtagaccaggtttacatggccattgtacgtgatgagggaacccaattgtcatcagttatgcgtctggcgttgttcatggagggcttcccactgaatttactgtcagacaagatgaaaagaattgcgacgcaaaggataattactgattactgtctcttcgttgaaaattttgatgagaagtcaatgaaatctcttgattgtggtctttttggggccccagtttttgctttgtcagcttcgttgcagtctcttcagatcagcacatctgatatcaatgtgaagaccttgaagtttttagttgccatcattcataactacagagtttgtgaagatcagctaatgaaggaccagtaccgtaagcttctgagtgaaacattagtgatcatctcaaatatgaagcacctatatgcatctcttgaaatggagaaagtaatctgtgagcttgaaaacctgtttatctcgggacctgctgtttctgatacccaattgtatgaatgcaaaccagatctggctcttttcatggcaggccttgctcacatggatatcaaagaagctgatgaaagttccaagatctctgctctatgggatttgtatcacatgttattgggagagcggcactgggcatttattcatttggcaatttcagcatttggatacttttctgctcggacaaattgcaataagctctggagattcgtgcctcagaatgcagcgctttcctatgatctgacttctggaaatgaggccaatctggagcgatttatgtctgagttcaaggtttttcttgagaaggaaacggcacttctcacaataacggctagctctgaccagcttggtctgcttgtgagggagggtctaaaactaaaagaaatgttccaaaagatttcaaaagtcgtcgttgagactgcggaatgtgactacatggaaattgatggtgaaaagcaggccatggagatgaacggtggaaaacaatccaataggaaaaggaaatttcctgatggaattgaaaagggaatggaactgctacaaagtggtatgaaggttattgtggatagtatttctcagttgcagcaaaatgatcaacccagttccaatgaactacccgacaacttcttgaccaccttttctcgccttgaagctgaaatttctcaactagttggcctggctggtggtgattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4487

Protein Analysis

984

Amino Acids

110.1

Weight (kDa)

4.97

Isoelectric Point (pI)

38.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006689)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04650 AT1G04650
fragaria_vesca	FvH4_4g05680 FvH4_4g05680 FvH4_4g05680 FvH4_4g05680 FvH4_4g05680 FvH4_4g05680 FvH4_4g05680 FvH4_4g05680
malus_domestica	MD00G1101100.v1.1
prunus_persica	Prupe.1G060300_v2.0.a1
pyrus_communis	pycom13g20320 pycom16g19820
rosa_chinensis	RchiOBHm_Chr4g0396881
rosa_laevigata	RLG00000009497
rosa_multiflora	Rmu_sc0000487.1_g000079
rosa_roxburghii	Rroxscaffold_5G00341740 Rroxscaffold_5G00341750
rosa_rugosa	Rorug03G0346800
rosa_samantha	Rh4AG072600 Rh4AG074000 Rh4BG071000 Rh4CG079100 Rh4DG068400
rosa_wichuraiana	Rw4G005980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	259
Acc36I	ACCTGC	1 cut(s)	2251
Acc65I	GGTACC	1 cut(s)	715
AccB1I	GGYRCC	1 cut(s)	715
AccBSI	CCGCTC	1 cut(s)	2389
AccI	GTMKAC	1 cut(s)	1779
AciI	CCGC	4 cut(s)	705, 1147, 2389, 2684
AclWI	GGATC	3 cut(s)	42, 327, 1211
AcoI	YGGCCR	2 cut(s)	1267, 1794
AcsI	RAATTY	7 cut(s)	462, 1201, 1555, 1870, 1942, 2765, 2919
AcuI	CTGAAG	3 cut(s)	743, 896, 2012
AcyI	GRCGYC	1 cut(s)	39
AfaI	GTAC	4 cut(s)	658, 717, 1803, 2129
AfeI	AGCGCT	1 cut(s)	2490
AfiI	CCNNNNNNNGG	1 cut(s)	1251
AflII	CTTAAG	1 cut(s)	83
AflIII	ACRYGT	2 cut(s)	1226, 2373
AhlI	ACTAGT	1 cut(s)	2929
AjnI	CCWGG	2 cut(s)	1782, 2937
AjuI	GAANNNNNNNTTGG	6 cut(s)	107, 139, 1088, 1120, 1336, 1368
Alw21I	GWGCWC	4 cut(s)	17, 291, 1155, 1768
Alw26I	GTCTC	3 cut(s)	1934, 2028, 2672
Alw44I	GTGCAC	1 cut(s)	1764
AlwI	GGATC	3 cut(s)	42, 327, 1211
AlwNI	CAGNNNCTG	1 cut(s)	155
Ama87I	CYCGRG	3 cut(s)	549, 584, 2236
Aor51HI	AGCGCT	1 cut(s)	2490
AoxI	GGCC	8 cut(s)	618, 1267, 1794, 1989, 2302, 2520, 2721, 2935
ApaI	GGGCCC	1 cut(s)	1993
ApaLI	GTGCAC	1 cut(s)	1764
ApeKI	GCWGC	7 cut(s)	155, 692, 800, 851, 1194, 2486, 2845
ApoI	RAATTY	7 cut(s)	462, 1201, 1555, 1870, 1942, 2765, 2919
ArsI	GACNNNNNNTTYG	4 cut(s)	593, 625, 1163, 1195
AseI	ATTAAT	3 cut(s)	642, 726, 1670
Asp700I	GAANNNNTTC	2 cut(s)	299, 1698
Asp718I	GGTACC	1 cut(s)	715
AspLEI	GCGC	1 cut(s)	2491
AspS9I	GGNCC	8 cut(s)	213, 618, 1254, 1517, 1989, 1990, 2122, 2240
AsuC2I	CCSGG	1 cut(s)	1245
AsuHPI	GGTGA	6 cut(s)	779, 802, 1196, 1556, 1651, 2723
AsuNHI	GCTAGC	1 cut(s)	2594
AvaI	CYCGRG	3 cut(s)	549, 584, 2236
AvaII	GGWCC	5 cut(s)	213, 1254, 1517, 2122, 2240
BaeGI	GKGCMC	2 cut(s)	1768, 1993
BalI	TGGCCA	1 cut(s)	1796
BanI	GGYRCC	1 cut(s)	715
BanII	GRGCYC	3 cut(s)	17, 1155, 1993
BarI	GAAGNNNNNNTAC	2 cut(s)	2111, 2143
BauI	CACGAG	1 cut(s)	290
BbsI	GAAGAC	2 cut(s)	1103, 2063
Bbv12I	GWGCWC	4 cut(s)	17, 291, 1155, 1768
BbvCI	CCTCAGC	1 cut(s)	855
BbvI	GCAGC	7 cut(s)	142, 704, 812, 863, 1181, 2498, 2857
BccI	CCATC	8 cut(s)	50, 673, 764, 1205, 1630, 2087, 2702, 2768
BceAI	ACGGC	3 cut(s)	1254, 2589, 2607
BciT130I	CCWGG	2 cut(s)	1784, 2939
BciVI	GTATCC	2 cut(s)	1019, 2423
BclI	TGATCA	3 cut(s)	432, 2157, 2854
BcnI	CCSGG	1 cut(s)	1245
BcoDI	GTCTC	3 cut(s)	1934, 2028, 2672
BcuI	ACTAGT	1 cut(s)	2929
BfaI	CTAG	6 cut(s)	167, 191, 903, 1169, 2595, 2930
BfmI	CTRYAG	1 cut(s)	2092
BfoI	RGCGCY	1 cut(s)	2492
BfrI	CTTAAG	1 cut(s)	83
BfuAI	ACCTGC	1 cut(s)	2251
BfuI	GTATCC	2 cut(s)	1019, 2423
BglII	AGATCT	2 cut(s)	2281, 2346
BisI	GCNGC	8 cut(s)	156, 693, 801, 852, 1195, 2390, 2487, 2846
BlpI	GCTNAGC	1 cut(s)	326
BlsI	GCNGC	8 cut(s)	157, 694, 802, 853, 1196, 2391, 2488, 2847
Bme1390I	CCNGG	3 cut(s)	1245, 1784, 2939
Bme18I	GGWCC	5 cut(s)	213, 1254, 1517, 2122, 2240
BmeT110I	CYCGRG	3 cut(s)	549, 584, 2236
BmgT120I	GGNCC	8 cut(s)	213, 618, 1254, 1517, 1989, 1990, 2122, 2240
BmiI	GGNNCC	8 cut(s)	214, 619, 717, 1816, 1990, 1991, 1992, 2241
BmrFI	CCNGG	3 cut(s)	1245, 1784, 2939
BmrI	ACTGGG	3 cut(s)	1988, 2404, 2856
BmsI	GCATC	2 cut(s)	1694, 2195
BmtI	GCTAGC	1 cut(s)	2598
BmuI	ACTGGG	3 cut(s)	1988, 2404, 2856
BpiI	GAAGAC	2 cut(s)	1103, 2063
BplI	GAGNNNNNCTC	2 cut(s)	1288, 1320
BpmI	CTGGAG	3 cut(s)	1556, 2485, 2549
Bpu10I	CCTNAGC	1 cut(s)	855
Bpu1102I	GCTNAGC	1 cut(s)	326
BpuEI	CTTGAG	4 cut(s)	261, 1139, 1571, 2582
BpuMI	CCSGG	1 cut(s)	1245
BsaAI	YACGTR	1 cut(s)	1805
BsaBI	GATNNNNATC	2 cut(s)	1215, 2367
BsaHI	GRCGYC	1 cut(s)	39
BsaJI	CCNNGG	5 cut(s)	208, 216, 267, 1104, 2724
BsaXI	ACNNNNNCTCC	2 cut(s)	1523, 1553
Bsc4I	CCNNNNNNNGG	1 cut(s)	1251
Bse1I	ACTGG	5 cut(s)	1068, 1994, 2125, 2399, 2862
Bse3DI	GCAATG	4 cut(s)	1051, 1238, 1484, 1647
Bse8I	GATNNNNATC	2 cut(s)	1215, 2367
BseBI	CCWGG	2 cut(s)	1784, 2939
BseDI	CCNNGG	5 cut(s)	208, 216, 267, 1104, 2724
BseGI	GGATG	4 cut(s)	179, 400, 1100, 1641
BseJI	GATNNNNATC	2 cut(s)	1215, 2367
BseLI	CCNNNNNNNGG	1 cut(s)	1251
BseMI	GCAATG	4 cut(s)	1051, 1238, 1484, 1647
BseNI	ACTGG	5 cut(s)	1068, 1994, 2125, 2399, 2862
BseSI	GKGCMC	2 cut(s)	1768, 1993
BseXI	GCAGC	7 cut(s)	142, 704, 812, 863, 1181, 2498, 2857
BseYI	CCCAGC	1 cut(s)	1581
BsgI	GTGCAG	1 cut(s)	1180
BshFI	GGCC	8 cut(s)	620, 1269, 1796, 1991, 2304, 2522, 2723, 2937
BshNI	GGYRCC	1 cut(s)	715
BsiHKAI	GWGCWC	4 cut(s)	17, 291, 1155, 1768
BsiHKCI	CYCGRG	3 cut(s)	549, 584, 2236
BsiSI	CCGG	1 cut(s)	1245
BslFI	GGGAC	2 cut(s)	226, 2253
BslI	CCNNNNNNNGG	1 cut(s)	1251
BsmAI	GTCTC	3 cut(s)	1934, 2028, 2672
BsmFI	GGGAC	2 cut(s)	226, 2253
BsmI	GAATGC	3 cut(s)	1486, 2276, 2488
BsnI	GGCC	8 cut(s)	620, 1269, 1796, 1991, 2304, 2522, 2723, 2937
BsoBI	CYCGRG	3 cut(s)	549, 584, 2236
Bsp120I	GGGCCC	1 cut(s)	1989
Bsp1286I	GDGCHC	5 cut(s)	17, 291, 1155, 1768, 1993
Bsp1407I	TGTACA	1 cut(s)	656
Bsp1720I	GCTNAGC	1 cut(s)	326
Bsp19I	CCATGG	1 cut(s)	2724
BspACI	CCGC	4 cut(s)	705, 1147, 2389, 2684
BspANI	GGCC	8 cut(s)	620, 1269, 1796, 1991, 2304, 2522, 2723, 2937
BspLI	GGNNCC	8 cut(s)	214, 619, 717, 1816, 1990, 1991, 1992, 2241
BspMI	ACCTGC	1 cut(s)	2251
BspOI	GCTAGC	1 cut(s)	2598
BspPI	GGATC	3 cut(s)	42, 327, 1211
BspQI	GCTCTTC	1 cut(s)	279
BspT107I	GGYRCC	1 cut(s)	715
BspTI	CTTAAG	1 cut(s)	83
BsrBI	CCGCTC	1 cut(s)	2389
BsrDI	GCAATG	4 cut(s)	1051, 1238, 1484, 1647
BsrGI	TGTACA	1 cut(s)	656
BsrI	ACTGG	5 cut(s)	1068, 1994, 2125, 2399, 2862
BssECI	CCNNGG	5 cut(s)	208, 216, 267, 1104, 2724
BssNI	GRCGYC	1 cut(s)	39
BssSI	CACGAG	1 cut(s)	290
BssT1I	CCWWGG	4 cut(s)	208, 216, 1104, 2724
Bst2BI	CACGAG	1 cut(s)	290
Bst2UI	CCWGG	2 cut(s)	1784, 2939
Bst4CI	ACNGT	8 cut(s)	151, 188, 391, 1441, 1878, 1928, 2132, 2738
Bst6I	CTCTTC	6 cut(s)	279, 414, 1184, 1374, 1937, 2031
BstACI	GRCGYC	1 cut(s)	39
BstAFI	CTTAAG	1 cut(s)	83
BstAPI	GCANNNNNTGC	1 cut(s)	2306
BstAUI	TGTACA	1 cut(s)	656
BstBAI	YACGTR	1 cut(s)	1805
BstC8I	GCNNGC	5 cut(s)	223, 343, 2302, 2596, 2721
BstDSI	CCRYGG	1 cut(s)	2724
BstF5I	GGATG	4 cut(s)	179, 400, 1100, 1641
BstH2I	RGCGCY	1 cut(s)	2492
BstHHI	GCGC	1 cut(s)	2491
BstMAI	GTCTC	3 cut(s)	1934, 2028, 2672
BstMWI	GCNNNNNNNGC	8 cut(s)	134, 857, 908, 1715, 2009, 2306, 2420, 2614
BstNI	CCWGG	2 cut(s)	1784, 2939
BstNSI	RCATGY	4 cut(s)	851, 1230, 1501, 2377
BstSCI	CCNGG	3 cut(s)	1243, 1782, 2937
BstSFI	CTRYAG	1 cut(s)	2092
BstSLI	GKGCMC	2 cut(s)	1768, 1993
BstV1I	GCAGC	7 cut(s)	142, 704, 812, 863, 1181, 2498, 2857
BstV2I	GAAGAC	2 cut(s)	1103, 2063
BstX2I	RGATCY	5 cut(s)	47, 319, 1216, 2281, 2346
BstYI	RGATCY	5 cut(s)	47, 319, 1216, 2281, 2346
BsuI	GTATCC	2 cut(s)	1019, 2423
BsuRI	GGCC	8 cut(s)	620, 1269, 1796, 1991, 2304, 2522, 2723, 2937
BtgI	CCRYGG	1 cut(s)	2724
BtsCI	GGATG	4 cut(s)	179, 400, 1100, 1641
BtsIMutI	CAGTG	6 cut(s)	156, 396, 872, 1075, 1865, 2392
BveI	ACCTGC	1 cut(s)	2251
Cac8I	GCNNGC	5 cut(s)	223, 343, 2302, 2596, 2721
CaiI	CAGNNNCTG	1 cut(s)	155
CfoI	GCGC	1 cut(s)	2491
Cfr13I	GGNCC	8 cut(s)	213, 618, 1254, 1517, 1989, 1990, 2122, 2240
CseI	GACGC	3 cut(s)	47, 1826, 1912
CsiI	ACCWGGT	1 cut(s)	1782
Csp6I	GTAC	4 cut(s)	657, 716, 1802, 2128
CspCI	CAANNNNNGTGG	2 cut(s)	1559, 1594
CviQI	GTAC	4 cut(s)	657, 716, 1802, 2128
DrdI	GACNNNNNNGTC	1 cut(s)	259
DseDI	GACNNNNNNGTC	1 cut(s)	259
EaeI	YGGCCR	2 cut(s)	1267, 1794
Eam1104I	CTCTTC	6 cut(s)	279, 414, 1184, 1374, 1937, 2031
EarI	CTCTTC	6 cut(s)	279, 414, 1184, 1374, 1937, 2031
EciI	GGCGGA	1 cut(s)	720
Ecl136II	GAGCTC	2 cut(s)	15, 1153
Eco130I	CCWWGG	4 cut(s)	208, 216, 1104, 2724
Eco147I	AGGCCT	1 cut(s)	2304
Eco24I	GRGCYC	3 cut(s)	17, 1155, 1993
Eco32I	GATATC	2 cut(s)	2047, 2320
Eco47I	GGWCC	5 cut(s)	213, 1254, 1517, 2122, 2240
Eco47III	AGCGCT	1 cut(s)	2490
Eco53kI	GAGCTC	2 cut(s)	15, 1153
Eco57I	CTGAAG	3 cut(s)	743, 896, 2012
Eco88I	CYCGRG	3 cut(s)	549, 584, 2236
EcoICRI	GAGCTC	2 cut(s)	15, 1153
EcoO109I	RGGNCCY	4 cut(s)	1254, 1989, 1990, 2240
EcoRI	GAATTC	1 cut(s)	462
EcoRII	CCWGG	2 cut(s)	1782, 2937
EcoRV	GATATC	2 cut(s)	2047, 2320
EcoT14I	CCWWGG	4 cut(s)	208, 216, 1104, 2724
EcoT22I	ATGCAT	2 cut(s)	1486, 2188
EcoT38I	GRGCYC	3 cut(s)	17, 1155, 1993
ErhI	CCWWGG	4 cut(s)	208, 216, 1104, 2724
FalI	AAGNNNNNCTT	2 cut(s)	1088, 1120
FaqI	GGGAC	2 cut(s)	226, 2253
FauI	CCCGC	1 cut(s)	1140
FauNDI	CATATG	2 cut(s)	227, 544
FbaI	TGATCA	3 cut(s)	432, 2157, 2854
FblI	GTMKAC	1 cut(s)	1779
Fnu4HI	GCNGC	8 cut(s)	156, 693, 801, 852, 1195, 2390, 2487, 2846
FokI	GGATG	4 cut(s)	166, 407, 1087, 1648
FriOI	GRGCYC	3 cut(s)	17, 1155, 1993
Fsp4HI	GCNGC	8 cut(s)	156, 693, 801, 852, 1195, 2390, 2487, 2846
FspBI	CTAG	6 cut(s)	167, 191, 903, 1169, 2595, 2930
GlaI	GCGC	1 cut(s)	2490
GluI	GCNGC	8 cut(s)	156, 693, 801, 852, 1195, 2390, 2487, 2846
GsaI	CCCAGC	1 cut(s)	1585
GsuI	CTGGAG	3 cut(s)	1556, 2485, 2549
HaeII	RGCGCY	1 cut(s)	2492
HaeIII	GGCC	8 cut(s)	620, 1269, 1796, 1991, 2304, 2522, 2723, 2937
HapII	CCGG	1 cut(s)	1245
HgaI	GACGC	3 cut(s)	47, 1826, 1912
HhaI	GCGC	1 cut(s)	2491
Hin1I	GRCGYC	1 cut(s)	39
Hin6I	GCGC	1 cut(s)	2489
HinP1I	GCGC	1 cut(s)	2489
HincII	GTYRAC	1 cut(s)	264
HindII	GTYRAC	1 cut(s)	264
HindIII	AAGCTT	4 cut(s)	89, 1328, 1346, 2135
HpaII	CCGG	1 cut(s)	1245
HphI	GGTGA	6 cut(s)	779, 802, 1196, 1556, 1651, 2723
Hpy166II	GTNNAC	6 cut(s)	264, 657, 1658, 1766, 1780, 1789
Hpy8I	GTNNAC	6 cut(s)	264, 657, 1658, 1766, 1780, 1789
Hpy99I	CGWCG	3 cut(s)	1322, 1906, 2675
HpyAV	CCTTC	7 cut(s)	608, 871, 1181, 1267, 2113, 2560, 2809
HpyCH4III	ACNGT	8 cut(s)	151, 188, 391, 1441, 1878, 1928, 2132, 2738
HpyCH4IV	ACGT	1 cut(s)	1804
HpyF10VI	GCNNNNNNNGC	8 cut(s)	134, 857, 908, 1715, 2009, 2306, 2420, 2614
HpySE526I	ACGT	1 cut(s)	1804
Hsp92I	GRCGYC	1 cut(s)	39
HspAI	GCGC	1 cut(s)	2489
KpnI	GGTACC	1 cut(s)	719
Ksp22I	TGATCA	3 cut(s)	432, 2157, 2854
LguI	GCTCTTC	1 cut(s)	279
LmnI	GCTCC	5 cut(s)	12, 539, 1150, 1531, 2530
Lsp1109I	GCAGC	7 cut(s)	142, 704, 812, 863, 1181, 2498, 2857
LweI	GCATC	2 cut(s)	1694, 2195
MabI	ACCWGGT	1 cut(s)	1782
MaeI	CTAG	6 cut(s)	167, 191, 903, 1169, 2595, 2930
MaeII	ACGT	1 cut(s)	1804
MaeIII	GTNAC	4 cut(s)	499, 646, 748, 2690
MbiI	CCGCTC	1 cut(s)	2389
MfeI	CAATTG	2 cut(s)	1820, 2261
MflI	RGATCY	5 cut(s)	47, 319, 1216, 2281, 2346
MhlI	GDGCHC	5 cut(s)	17, 291, 1155, 1768, 1993
MlsI	TGGCCA	1 cut(s)	1796
MluNI	TGGCCA	1 cut(s)	1796
MlyI	GAGTC	4 cut(s)	247, 575, 1547, 1637
MmeI	TCCRAC	2 cut(s)	207, 1244
Mox20I	TGGCCA	1 cut(s)	1796
Mph1103I	ATGCAT	2 cut(s)	1486, 2188
MroXI	GAANNNNTTC	2 cut(s)	299, 1698
MscI	TGGCCA	1 cut(s)	1796
MslI	CAYNNNNRTG	3 cut(s)	890, 2181, 2729
Msp20I	TGGCCA	1 cut(s)	1796
MspA1I	CMGCKG	2 cut(s)	310, 854
MspCI	CTTAAG	1 cut(s)	83
MspI	CCGG	1 cut(s)	1245
MspR9I	CCNGG	3 cut(s)	1245, 1784, 2939
MunI	CAATTG	2 cut(s)	1820, 2261
Mva1269I	GAATGC	3 cut(s)	1486, 2276, 2488
MvaI	CCWGG	2 cut(s)	1784, 2939
MwoI	GCNNNNNNNGC	8 cut(s)	134, 857, 908, 1715, 2009, 2306, 2420, 2614
NciI	CCSGG	1 cut(s)	1245
NcoI	CCATGG	1 cut(s)	2724
NdeI	CATATG	2 cut(s)	227, 544
NheI	GCTAGC	1 cut(s)	2594
NlaIV	GGNNCC	8 cut(s)	214, 619, 717, 1816, 1990, 1991, 1992, 2241
NmeAIII	GCCGAG	1 cut(s)	163
NmuCI	GTSAC	2 cut(s)	748, 2690
NsiI	ATGCAT	2 cut(s)	1486, 2188
NspI	RCATGY	4 cut(s)	851, 1230, 1501, 2377
PaeR7I	CTCGAG	1 cut(s)	584
PceI	AGGCCT	1 cut(s)	2304
PciI	ACATGT	2 cut(s)	1226, 2373
PciSI	GCTCTTC	1 cut(s)	279
PcsI	WCGNNNNNNNCGW	1 cut(s)	1314
PctI	GAATGC	3 cut(s)	1486, 2276, 2488
PdmI	GAANNNNTTC	2 cut(s)	299, 1698
PkrI	GCNGC	8 cut(s)	157, 694, 802, 853, 1196, 2391, 2488, 2847
PleI	GAGTC	4 cut(s)	247, 574, 1546, 1636
PpsI	GAGTC	4 cut(s)	247, 574, 1546, 1636
Ppu21I	YACGTR	1 cut(s)	1805
PpuMI	RGGWCCY	2 cut(s)	1254, 2240
PscI	ACATGT	2 cut(s)	1226, 2373
PshBI	ATTAAT	3 cut(s)	642, 726, 1670
Psp124BI	GAGCTC	2 cut(s)	17, 1155
Psp5II	RGGWCCY	2 cut(s)	1254, 2240
Psp6I	CCWGG	2 cut(s)	1782, 2937
PspFI	CCCAGC	1 cut(s)	1581
PspGI	CCWGG	2 cut(s)	1782, 2937
PspN4I	GGNNCC	8 cut(s)	214, 619, 717, 1816, 1990, 1991, 1992, 2241
PspOMI	GGGCCC	1 cut(s)	1989
PspPI	GGNCC	8 cut(s)	213, 618, 1254, 1517, 1989, 1990, 2122, 2240
PspPPI	RGGWCCY	2 cut(s)	1254, 2240
PstNI	CAGNNNCTG	1 cut(s)	155
PsuI	RGATCY	5 cut(s)	47, 319, 1216, 2281, 2346
PvuII	CAGCTG	2 cut(s)	310, 854
RsaI	GTAC	4 cut(s)	658, 717, 1803, 2129
RsaNI	GTAC	4 cut(s)	657, 716, 1802, 2128
RseI	CAYNNNNRTG	3 cut(s)	890, 2181, 2729
SacI	GAGCTC	2 cut(s)	17, 1155
SapI	GCTCTTC	1 cut(s)	279
SatI	GCNGC	8 cut(s)	156, 693, 801, 852, 1195, 2390, 2487, 2846
Sau96I	GGNCC	8 cut(s)	213, 618, 1254, 1517, 1989, 1990, 2122, 2240
SchI	GAGTC	4 cut(s)	247, 575, 1547, 1637
ScrFI	CCNGG	3 cut(s)	1245, 1784, 2939
SduI	GDGCHC	5 cut(s)	17, 291, 1155, 1768, 1993
SexAI	ACCWGGT	1 cut(s)	1782
SfaNI	GCATC	2 cut(s)	1694, 2195
SfcI	CTRYAG	1 cut(s)	2092
Sfr274I	CTCGAG	1 cut(s)	584
SinI	GGWCC	5 cut(s)	213, 1254, 1517, 2122, 2240
SlaI	CTCGAG	1 cut(s)	584
SmiMI	CAYNNNNRTG	3 cut(s)	890, 2181, 2729
SmlI	CTYRAG	6 cut(s)	83, 276, 584, 1154, 1550, 2561
SmoI	CTYRAG	6 cut(s)	83, 276, 584, 1154, 1550, 2561
SpeI	ACTAGT	1 cut(s)	2929
SseBI	AGGCCT	1 cut(s)	2304
SsiI	CCGC	4 cut(s)	705, 1147, 2389, 2684
SspMI	CTAG	6 cut(s)	167, 191, 903, 1169, 2595, 2930
SstI	GAGCTC	2 cut(s)	17, 1155
StuI	AGGCCT	1 cut(s)	2304
StyD4I	CCNGG	3 cut(s)	1243, 1782, 2937
StyI	CCWWGG	4 cut(s)	208, 216, 1104, 2724
TaaI	ACNGT	8 cut(s)	151, 188, 391, 1441, 1878, 1928, 2132, 2738
TaiI	ACGT	1 cut(s)	1807
TaqI	TCGA	2 cut(s)	585, 1308
TatI	WGTACW	1 cut(s)	656
TauI	GCSGC	1 cut(s)	2392
TscAI	CASTG	6 cut(s)	156, 396, 879, 1075, 1872, 2399
TseFI	GTSAC	2 cut(s)	748, 2690
TseI	GCWGC	7 cut(s)	155, 692, 800, 851, 1194, 2486, 2845
Tsp45I	GTSAC	2 cut(s)	748, 2690
TspGWI	ACGGA	1 cut(s)	1687
TspRI	CASTG	6 cut(s)	156, 396, 879, 1075, 1872, 2399
Vha464I	CTTAAG	1 cut(s)	83
VneI	GTGCAC	1 cut(s)	1764
VpaK11BI	GGWCC	5 cut(s)	213, 1254, 1517, 2122, 2240
VspI	ATTAAT	3 cut(s)	642, 726, 1670
XapI	RAATTY	7 cut(s)	462, 1201, 1555, 1870, 1942, 2765, 2919
XbaI	TCTAGA	1 cut(s)	1168
XceI	RCATGY	4 cut(s)	851, 1230, 1501, 2377
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1628
XhoI	CTCGAG	1 cut(s)	584
XmiI	GTMKAC	1 cut(s)	1779
XmnI	GAANNNNTTC	2 cut(s)	299, 1698
XspI	CTAG	6 cut(s)	167, 191, 903, 1169, 2595, 2930
Zsp2I	ATGCAT	2 cut(s)	1486, 2188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.