Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004692

Physical Location & Seq

Genomic Coordinates Reverse (-)

1471323 .. 1476289

Gene Structure 4967 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G05120.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

ATGGAGCTTCGGTCCCGCAATAAGGCGATTCGTCCATCGACTGAAGTTGTGGATCTCGAGGAAGGAACTGGTATCAACCCTGATGAAGAACCTTATGCTATATCTTCAGATGACGATTCAATCGGCTCTGAATTTCAAGGTGACGAGGAGGAGGAGGAGGAGTTAGAGGAGGTTGTTGCTAATGATGATTTACCAAATCCTGTACCTGTTTTGGCAATTGTAAACCTACCAAGAGCAAGCAAGAAAAGGAAAAAACCTGATGCACGCAAAGAGAAAGTAGTGCTATTGTGGGAGACTTGGGAAAAAGAGCAGAATAGCTGGATTGATGAACATATGTCAGAGGATGTTGATTTAGATCAGCACAATGCTGTGATTGCTGAAACTGCTGAGCCGCCTTCAGATTTGATTATGCCGCTATTAAGGTACCAAAAGGAATTTTTGGCCTGGGCAACAAAACAGGAACAATCTGTTGCAGGAGGGATTCTCGCGGATGAGATGGGAATGGGAAAAACAATACAAGCCATCTCTCTTGTTCTTGCCAGACGAGAAGTTGACAGGGCACAGTTTGGGGAAGCTGCGGGTTGTACTCTGGTTCTTTGTCCTCTTGTTGCTGTTTCTCAGTGGTTAAATGAGATTGCTCGGTTTACATCCCCGGGAAGCACTAAGGTCCTTGTATACCATGGGGCAAAGAGAGCGAAGAATATTAAAGAGTTTATGAACTACGACTTTGTTTTGACAACATATTCCACTGTTGAGAGTGAATATAGGAGAAACATAATGCCGTCGAAGGTGCAATGTGCATATTGCAGCAAGTCATTTTACCCGAAGAAGCTTGTGATCCACCTGCGATATTTTTGTGGACCTTCGGCTGTCAAAACGGCAAAACAATCTAAGCAGAAAAGGAAGAAGACTTCAGATTCATCCTCACAGCAAGGCAAGGAGGCTGATGCAGGAGAGGATAAGAAATTAAAGAAATCTAAGAAGAAGACCAAACAAACAGTAGAAAAAGATCAGTTAGGTTCAGATGACAAAGAGAAGTCTCTTTTGCACTCTGTTAAGTGGAATCGGATCATCTTGGATGAGGCTCATTACATCAAAGAAAGACGTAGCAATACTGCAAGAGCTGTTTTTGCTTTGGAGGCTACCTATAGATGGGCTTTGAGTGGCACTCCTCTCCAAAATCGTGTTGGAGAGCTTTACTCACTGATCCGCTTCTTGCAAATTCGCCCATACTCGTATTACTTTTGCAAGGATTGTGACTGTAGAATTCTTGATTACGTTGCTCATCAAAGCTGCCCTCACTGTCCTCATAATGCAGTTCGACATTTCTGTTGGTGGAACAAGTATGTGGCCAAGCCAATAACAGTATATGGAAGCTTTGGACTGGGAAAAAGAGCCATGATATTGCTTAAACACAAAGTTCTGAAGGACATCCTTTTAAGACGTACTAAATTGGGCCGGGCAGCTGATCTTGCTCTTCCTCCTAGAATTATCACTTTGAGGCGGGATACACTAGATGTAAAGGAGTTTGATTACTATGAATCACTATACAAAAACAGCCAGGCGGAATTTAATACGTATATTGAGGCTGGGACATTAATGAATAACTATGCACATATATTTGATCTTCTCACCCGCCTGAGACAGGCCGTTGATCATCCATACCTTGTGGTGTATTCCAATTCTAGTGGCGCTAATGCTAACTTGGTTGATGAGAACAAAAGTGAGCAAGAATGTGGTCTCTGCCACGATCCGGCCGAGGACTACGTTGTGACTTCTTGTGCACATGTGTTCTGTAAAGCTTGTTTGATTGGTTTCTCCGCGTCCCTGGGAAAAGTCACCTGCCCGACATGCTCGAAACTACTGACTGTGGATTGGACTACCAAAGCTGACACAGAGCATAAGGCGAGCAAGACAACACTTAAAGGATTTAGAGCCTCAAGCATTTTAAATCGTATAAAGCTTGATGATTTTCAGACAAGTACAAAGATTGAGGCTTTGAGAGAAGAAATTAGGTTCATGGTTGAAAGAGATGGGTCTGCCAAAGCAATAGTTTTCAGCCAGTTCACATCATTTTTGGACCTTATAAATTATACCCTTGGGAAGTGTGGGGTTAGTTGTGTTCAACTGGTGGGAAGCATGACCATGGCAGCTAGAGATACTGCCATCAACAAATTCAAAGAAGACCCAGATTGCAGAGTTTTCTTAATGAGCTTGAAAGCCGGAGGGGTTGCTCTTAATTTAACTGTTGCTTCACATGTTTTTATGATGGACCCGTGGTGGAACCCAGCGGTTGAGAGGCAAGCACAAGACAGAATTCATAGGATCGGACAGTACAAGCCAATCAGGGTTGTGAGATTCATAATAGAGAACACAGTGGAGGAAAGGATTTTAAGGCTTCAGAAGAAGAAGGAACTTGTGTTTGAAGGGACGGTTGGTGGCTCTCAGGAGGCTATAGGAAAGCTGACCGAGGAAGATATGAGGTTCTTGTTTACAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000109 GO:0000166 GO:0000720 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004842 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006290 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009987 GO:0016043 GO:0016462 GO:0016567 GO:0016740 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019538 GO:0019787 GO:0030554 GO:0032392 GO:0032446 GO:0032508 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0033554 GO:0034641 GO:0035639 GO:0036094 GO:0036211 GO:0042623 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0050896 GO:0051276 GO:0051716 GO:0061630 GO:0061659 GO:0070035 GO:0070647 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097367 GO:0140096 GO:0140097 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1990391

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX

Protein Analysis

833

Amino Acids

94.59

Weight (kDa)

8.36

Isoelectric Point (pI)

47.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SNF2-rel_dom	PF00176	185 - 599	2.7e-53	SNF2-related domain
zf-RING_5	PF14634	622 - 663	3.7e-06	zinc-RING finger domain
Helicase_C	PF00271	706 - 820	8.4e-20	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004692)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G05120 AT1G05120
fragaria_vesca	FvH4_6g42970 FvH4_6g42970
malus_domestica	MD17G1098500.v1.1
prunus_persica	Prupe.3G215900_v2.0.a1 Prupe.3G215900_v2.0.a1
pyrus_communis	pycom09g03310 pycom17g09390
rosa_chinensis	RchiOBHm_Chr2g0158951
rosa_laevigata	RLG00000021126
rosa_multiflora	Rmu_sc0002845.1_g000016 Rmu_sc0007967.1_g000006 Rmu_sc0013139.1_g000001 Rmu_sc0030100.1_g000001
rosa_roxburghii	Rroxscaffold_1G00030500 Rroxscaffold_2G00090850
rosa_rugosa	Rorug02G0473200
rosa_samantha	Rh2AG539700 Rh2BG552600 Rh2CG523000 Rh2DG562300
rosa_wichuraiana	Rw2G044670 Rw7G039330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2087
AarI	CACCTGC	2 cut(s)	852, 1850
Acc36I	ACCTGC	2 cut(s)	852, 1850
Acc65I	GGTACC	1 cut(s)	423
AccB1I	GGYRCC	1 cut(s)	423
AccI	GTMKAC	1 cut(s)	675
AccII	CGCG	2 cut(s)	488, 1823
AclWI	GGATC	6 cut(s)	60, 832, 1076, 1201, 1745, 2333
AcoI	YGGCCR	2 cut(s)	1350, 1755
AcsI	RAATTY	7 cut(s)	131, 434, 1221, 1266, 1568, 2174, 2316
AcuI	CTGAAG	6 cut(s)	63, 90, 381, 897, 1445, 2384
AfaI	GTAC	6 cut(s)	204, 425, 586, 1447, 1984, 2336
AfiI	CCNNNNNNNGG	4 cut(s)	22, 1152, 1645, 1753
AflIII	ACRYGT	2 cut(s)	1786, 2257
AgsI	TTSAA	7 cut(s)	120, 137, 2027, 2126, 2179, 2218, 2426
AjnI	CCWGG	3 cut(s)	443, 1560, 1827
AjuI	GAANNNNNNNTTGG	2 cut(s)	2418, 2450
Alw21I	GWGCWC	1 cut(s)	1786
Alw26I	GTCTC	4 cut(s)	287, 1044, 1636, 1745
Alw44I	GTGCAC	1 cut(s)	1782
AlwI	GGATC	6 cut(s)	60, 832, 1076, 1201, 1745, 2333
Ama87I	CYCGRG	2 cut(s)	56, 652
AoxI	GGCC	5 cut(s)	441, 1350, 1456, 1647, 1755
ApaLI	GTGCAC	1 cut(s)	1782
ApeKI	GCWGC	5 cut(s)	575, 807, 1293, 1463, 2150
ApoI	RAATTY	7 cut(s)	131, 434, 1221, 1266, 1568, 2174, 2316
AseI	ATTAAT	1 cut(s)	1598
Asp718I	GGTACC	1 cut(s)	423
AspLEI	GCGC	1 cut(s)	1694
AspS9I	GGNCC	6 cut(s)	12, 667, 860, 1456, 2080, 2272
AsuC2I	CCSGG	3 cut(s)	653, 654, 1460
AsuHPI	GGTGA	3 cut(s)	152, 1624, 1831
AvaI	CYCGRG	2 cut(s)	56, 652
AvaII	GGWCC	5 cut(s)	12, 667, 860, 2080, 2272
BaeGI	GKGCMC	2 cut(s)	562, 1786
BalI	TGGCCA	1 cut(s)	1352
BanI	GGYRCC	1 cut(s)	423
BbsI	GAAGAC	3 cut(s)	914, 992, 2190
Bbv12I	GWGCWC	1 cut(s)	1786
BbvI	GCAGC	5 cut(s)	562, 819, 1280, 1475, 2162
BccI	CCATC	7 cut(s)	43, 490, 530, 1146, 2027, 2174, 2263
BceAI	ACGGC	3 cut(s)	766, 894, 1634
BciT130I	CCWGG	3 cut(s)	445, 1562, 1829
BciVI	GTATCC	1 cut(s)	1501
BclI	TGATCA	1 cut(s)	1654
BcnI	CCSGG	3 cut(s)	653, 654, 1460
BcoDI	GTCTC	4 cut(s)	287, 1044, 1636, 1745
BfaI	CTAG	4 cut(s)	1485, 1514, 1686, 2154
BfmI	CTRYAG	3 cut(s)	1147, 1261, 2454
BfoI	RGCGCY	1 cut(s)	1695
BfuAI	ACCTGC	2 cut(s)	852, 1850
BfuI	GTATCC	1 cut(s)	1501
BisI	GCNGC	7 cut(s)	392, 413, 576, 808, 1294, 1464, 2151
BlpI	GCTNAGC	1 cut(s)	387
BlsI	GCNGC	7 cut(s)	393, 414, 577, 809, 1295, 1465, 2152
Bme1390I	CCNGG	6 cut(s)	445, 653, 654, 1460, 1562, 1829
Bme18I	GGWCC	5 cut(s)	12, 667, 860, 2080, 2272
BmeT110I	CYCGRG	2 cut(s)	56, 652
BmgT120I	GGNCC	6 cut(s)	12, 667, 860, 1456, 2080, 2272
BmiI	GGNNCC	4 cut(s)	14, 425, 2274, 2285
BmrFI	CCNGG	6 cut(s)	445, 653, 654, 1460, 1562, 1829
BmrI	ACTGGG	1 cut(s)	1394
BmsI	GCATC	2 cut(s)	250, 937
BmuI	ACTGGG	1 cut(s)	1394
BpiI	GAAGAC	3 cut(s)	914, 992, 2190
BplI	GAGNNNNNCTC	6 cut(s)	468, 500, 1153, 1185, 1184, 1216
Bpu1102I	GCTNAGC	1 cut(s)	387
BpuEI	CTTGAG	1 cut(s)	1924
BpuMI	CCSGG	3 cut(s)	653, 654, 1460
BsaAI	YACGTR	1 cut(s)	1578
BsaBI	GATNNNNATC	1 cut(s)	354
BsaI	GGTCTC	1 cut(s)	1745
BsaXI	ACNNNNNCTCC	3 cut(s)	26, 146, 176
Bsc4I	CCNNNNNNNGG	4 cut(s)	22, 1152, 1645, 1753
Bse1I	ACTGG	4 cut(s)	73, 1389, 2062, 2133
Bse3DI	GCAATG	1 cut(s)	800
Bse8I	GATNNNNATC	1 cut(s)	354
BseBI	CCWGG	3 cut(s)	445, 1562, 1829
BseGI	GGATG	7 cut(s)	349, 496, 647, 920, 1084, 1431, 1657
BseJI	GATNNNNATC	1 cut(s)	354
BseLI	CCNNNNNNNGG	4 cut(s)	22, 1152, 1645, 1753
BseMI	GCAATG	1 cut(s)	800
BseMII	CTCAG	4 cut(s)	378, 632, 1631, 2459
BseNI	ACTGG	4 cut(s)	73, 1389, 2062, 2133
BseRI	GAGGAG	7 cut(s)	161, 164, 167, 170, 173, 182, 1161
BseSI	GKGCMC	2 cut(s)	562, 1786
BseX3I	CGGCCG	1 cut(s)	1755
BseXI	GCAGC	5 cut(s)	562, 819, 1280, 1475, 2162
BseYI	CCCAGC	2 cut(s)	1589, 2287
Bsh1236I	CGCG	2 cut(s)	488, 1823
Bsh1285I	CGRYCG	1 cut(s)	1758
BshFI	GGCC	5 cut(s)	443, 1352, 1458, 1649, 1757
BshNI	GGYRCC	1 cut(s)	423
BsiEI	CGRYCG	1 cut(s)	1758
BsiHKAI	GWGCWC	1 cut(s)	1786
BsiHKCI	CYCGRG	2 cut(s)	56, 652
BsiSI	CCGG	4 cut(s)	653, 1459, 1754, 2223
BslFI	GGGAC	3 cut(s)	1606, 1810, 2443
BslI	CCNNNNNNNGG	4 cut(s)	22, 1152, 1645, 1753
BsmAI	GTCTC	4 cut(s)	287, 1044, 1636, 1745
BsmFI	GGGAC	3 cut(s)	1606, 1810, 2443
BsnI	GGCC	5 cut(s)	443, 1352, 1458, 1649, 1757
Bso31I	GGTCTC	1 cut(s)	1745
BsoBI	CYCGRG	2 cut(s)	56, 652
Bsp1286I	GDGCHC	2 cut(s)	562, 1786
Bsp1720I	GCTNAGC	1 cut(s)	387
Bsp19I	CCATGG	2 cut(s)	679, 2145
BspANI	GGCC	5 cut(s)	443, 1352, 1458, 1649, 1757
BspCNI	CTCAG	4 cut(s)	379, 631, 1632, 2458
BspFNI	CGCG	2 cut(s)	488, 1823
BspLI	GGNNCC	4 cut(s)	14, 425, 2274, 2285
BspMI	ACCTGC	2 cut(s)	852, 1850
BspPI	GGATC	6 cut(s)	60, 832, 1076, 1201, 1745, 2333
BspQI	GCTCTTC	1 cut(s)	1482
BspT107I	GGYRCC	1 cut(s)	423
BspTNI	GGTCTC	1 cut(s)	1745
BsrDI	GCAATG	1 cut(s)	800
BsrI	ACTGG	4 cut(s)	73, 1389, 2062, 2133
BssNAI	GTATAC	1 cut(s)	676
BssT1I	CCWWGG	3 cut(s)	679, 2098, 2145
Bst1107I	GTATAC	1 cut(s)	676
Bst2UI	CCWGG	3 cut(s)	445, 1562, 1829
Bst6I	CTCTTC	1 cut(s)	1482
BstBAI	YACGTR	1 cut(s)	1578
BstC8I	GCNNGC	4 cut(s)	238, 265, 1909, 2304
BstDEI	CTNAG	7 cut(s)	387, 618, 663, 891, 978, 1640, 2445
BstDSI	CCRYGG	3 cut(s)	679, 2145, 2276
BstENI	CCTNNNNNAGG	1 cut(s)	1643
BstF5I	GGATG	7 cut(s)	349, 496, 647, 920, 1084, 1431, 1657
BstFNI	CGCG	2 cut(s)	488, 1823
BstH2I	RGCGCY	1 cut(s)	1695
BstHHI	GCGC	1 cut(s)	1694
BstMAI	GTCTC	4 cut(s)	287, 1044, 1636, 1745
BstMCI	CGRYCG	1 cut(s)	1758
BstMWI	GCNNNNNNNGC	7 cut(s)	374, 383, 692, 1130, 1139, 1472, 1851
BstNI	CCWGG	3 cut(s)	445, 1562, 1829
BstNSI	RCATGY	3 cut(s)	1790, 1854, 2261
BstSCI	CCNGG	6 cut(s)	443, 651, 652, 1458, 1560, 1827
BstSFI	CTRYAG	3 cut(s)	1147, 1261, 2454
BstSLI	GKGCMC	2 cut(s)	562, 1786
BstSNI	TACGTA	1 cut(s)	1578
BstUI	CGCG	2 cut(s)	488, 1823
BstV1I	GCAGC	5 cut(s)	562, 819, 1280, 1475, 2162
BstV2I	GAAGAC	3 cut(s)	914, 992, 2190
BstX2I	RGATCY	1 cut(s)	52
BstYI	RGATCY	1 cut(s)	52
BstZ17I	GTATAC	1 cut(s)	676
BstZI	CGGCCG	1 cut(s)	1755
BsuI	GTATCC	1 cut(s)	1501
BsuRI	GGCC	5 cut(s)	443, 1352, 1458, 1649, 1757
BtgI	CCRYGG	3 cut(s)	679, 2145, 2276
BtsCI	GGATG	7 cut(s)	349, 496, 647, 920, 1084, 1431, 1657
BtsIMutI	CAGTG	5 cut(s)	626, 747, 1202, 1300, 2382
BveI	ACCTGC	2 cut(s)	852, 1850
Cac8I	GCNNGC	4 cut(s)	238, 265, 1909, 2304
CfoI	GCGC	1 cut(s)	1694
Cfr13I	GGNCC	6 cut(s)	12, 667, 860, 1456, 2080, 2272
Cfr9I	CCCGGG	1 cut(s)	652
CseI	GACGC	1 cut(s)	1812
Csp6I	GTAC	6 cut(s)	203, 424, 585, 1446, 1983, 2335
CspCI	CAANNNNNGTGG	2 cut(s)	1669, 1704
CviAII	CATG	8 cut(s)	680, 1399, 1787, 1851, 2020, 2140, 2146, 2258
CviQI	GTAC	6 cut(s)	203, 424, 585, 1446, 1983, 2335
DdeI	CTNAG	7 cut(s)	387, 618, 663, 891, 978, 1640, 2445
DraI	TTTAAA	1 cut(s)	1950
EaeI	YGGCCR	2 cut(s)	1350, 1755
EagI	CGGCCG	1 cut(s)	1755
Eam1104I	CTCTTC	1 cut(s)	1482
EarI	CTCTTC	1 cut(s)	1482
EciI	GGCGGA	1 cut(s)	1580
EclXI	CGGCCG	1 cut(s)	1755
Eco105I	TACGTA	1 cut(s)	1578
Eco130I	CCWWGG	3 cut(s)	679, 2098, 2145
Eco31I	GGTCTC	1 cut(s)	1745
Eco47I	GGWCC	5 cut(s)	12, 667, 860, 2080, 2272
Eco52I	CGGCCG	1 cut(s)	1755
Eco57I	CTGAAG	6 cut(s)	63, 90, 381, 897, 1445, 2384
Eco88I	CYCGRG	2 cut(s)	56, 652
EcoNI	CCTNNNNNAGG	1 cut(s)	1643
EcoO109I	RGGNCCY	1 cut(s)	667
EcoRI	GAATTC	2 cut(s)	1266, 2316
EcoRII	CCWGG	3 cut(s)	443, 1560, 1827
EcoT14I	CCWWGG	3 cut(s)	679, 2098, 2145
ErhI	CCWWGG	3 cut(s)	679, 2098, 2145
FaeI	CATG	8 cut(s)	683, 1402, 1790, 1854, 2023, 2143, 2149, 2261
FaqI	GGGAC	3 cut(s)	1606, 1810, 2443
FatI	CATG	8 cut(s)	679, 1398, 1786, 1850, 2019, 2139, 2145, 2257
FauI	CCCGC	4 cut(s)	23, 571, 1497, 1643
FauNDI	CATATG	1 cut(s)	333
FbaI	TGATCA	1 cut(s)	1654
FblI	GTMKAC	1 cut(s)	675
Fnu4HI	GCNGC	7 cut(s)	392, 413, 576, 808, 1294, 1464, 2151
FokI	GGATG	7 cut(s)	356, 503, 634, 907, 1091, 1418, 1644
Fsp4HI	GCNGC	7 cut(s)	392, 413, 576, 808, 1294, 1464, 2151
FspBI	CTAG	4 cut(s)	1485, 1514, 1686, 2154
GlaI	GCGC	1 cut(s)	1693
GluI	GCNGC	7 cut(s)	392, 413, 576, 808, 1294, 1464, 2151
GsaI	CCCAGC	2 cut(s)	1593, 2291
HaeII	RGCGCY	1 cut(s)	1695
HaeIII	GGCC	5 cut(s)	443, 1352, 1458, 1649, 1757
HapII	CCGG	4 cut(s)	653, 1459, 1754, 2223
HgaI	GACGC	1 cut(s)	1812
HhaI	GCGC	1 cut(s)	1694
Hin1II	CATG	8 cut(s)	683, 1402, 1790, 1854, 2023, 2143, 2149, 2261
Hin6I	GCGC	1 cut(s)	1692
HinP1I	GCGC	1 cut(s)	1692
HincII	GTYRAC	1 cut(s)	553
HindII	GTYRAC	1 cut(s)	553
HindIII	AAGCTT	4 cut(s)	830, 1375, 1800, 1961
HinfI	GANTC	7 cut(s)	28, 116, 481, 917, 1063, 1541, 2358
HpaII	CCGG	4 cut(s)	653, 1459, 1754, 2223
HphI	GGTGA	3 cut(s)	152, 1624, 1831
Hpy166II	GTNNAC	8 cut(s)	223, 553, 645, 676, 860, 1784, 2067, 2493
Hpy188III	TCNNGA	3 cut(s)	56, 1271, 2447
Hpy8I	GTNNAC	8 cut(s)	223, 553, 645, 676, 860, 1784, 2067, 2493
Hpy99I	CGWCG	1 cut(s)	787
HpyAV	CCTTC	7 cut(s)	56, 405, 781, 873, 1420, 2404, 2420
HpyCH4IV	ACGT	5 cut(s)	1105, 1278, 1444, 1577, 1767
HpyF10VI	GCNNNNNNNGC	7 cut(s)	374, 383, 692, 1130, 1139, 1472, 1851
HpyF3I	CTNAG	7 cut(s)	387, 618, 663, 891, 978, 1640, 2445
HpySE526I	ACGT	5 cut(s)	1105, 1278, 1444, 1577, 1767
Hsp92II	CATG	8 cut(s)	683, 1402, 1790, 1854, 2023, 2143, 2149, 2261
HspAI	GCGC	1 cut(s)	1692
KpnI	GGTACC	1 cut(s)	427
Ksp22I	TGATCA	1 cut(s)	1654
LguI	GCTCTTC	1 cut(s)	1482
LmnI	GCTCC	1 cut(s)	4
Lsp1109I	GCAGC	5 cut(s)	562, 819, 1280, 1475, 2162
LweI	GCATC	2 cut(s)	250, 937
MaeI	CTAG	4 cut(s)	1485, 1514, 1686, 2154
MaeII	ACGT	5 cut(s)	1105, 1278, 1444, 1577, 1767
MaeIII	GTNAC	4 cut(s)	140, 1256, 1771, 1837
MfeI	CAATTG	1 cut(s)	216
MflI	RGATCY	1 cut(s)	52
MhlI	GDGCHC	2 cut(s)	562, 1786
MlsI	TGGCCA	1 cut(s)	1352
MluNI	TGGCCA	1 cut(s)	1352
MmeI	TCCRAC	1 cut(s)	1168
Mox20I	TGGCCA	1 cut(s)	1352
MscI	TGGCCA	1 cut(s)	1352
MslI	CAYNNNNRTG	1 cut(s)	2144
Msp20I	TGGCCA	1 cut(s)	1352
MspA1I	CMGCKG	2 cut(s)	1466, 2291
MspI	CCGG	4 cut(s)	653, 1459, 1754, 2223
MspR9I	CCNGG	6 cut(s)	445, 653, 654, 1460, 1562, 1829
MunI	CAATTG	1 cut(s)	216
MvaI	CCWGG	3 cut(s)	445, 1562, 1829
MvnI	CGCG	2 cut(s)	488, 1823
MwoI	GCNNNNNNNGC	7 cut(s)	374, 383, 692, 1130, 1139, 1472, 1851
NciI	CCSGG	3 cut(s)	653, 654, 1460
NcoI	CCATGG	2 cut(s)	679, 2145
NdeI	CATATG	1 cut(s)	333
NlaIII	CATG	8 cut(s)	683, 1402, 1790, 1854, 2023, 2143, 2149, 2261
NlaIV	GGNNCC	4 cut(s)	14, 425, 2274, 2285
NmeAIII	GCCGAG	1 cut(s)	1783
NmuCI	GTSAC	4 cut(s)	140, 1256, 1771, 1837
NspI	RCATGY	3 cut(s)	1790, 1854, 2261
PaeR7I	CTCGAG	1 cut(s)	56
PaqCI	CACCTGC	2 cut(s)	852, 1850
PasI	CCCWGGG	1 cut(s)	1828
PciI	ACATGT	2 cut(s)	1786, 2257
PciSI	GCTCTTC	1 cut(s)	1482
PcsI	WCGNNNNNNNCGW	1 cut(s)	1755
PfeI	GAWTC	7 cut(s)	28, 116, 481, 917, 1063, 1541, 2358
PkrI	GCNGC	7 cut(s)	393, 414, 577, 809, 1295, 1465, 2152
Ppu21I	YACGTR	1 cut(s)	1578
PpuMI	RGGWCCY	1 cut(s)	667
PscI	ACATGT	2 cut(s)	1786, 2257
PshBI	ATTAAT	1 cut(s)	1598
PsiI	TTATAA	1 cut(s)	2087
Psp5II	RGGWCCY	1 cut(s)	667
Psp6I	CCWGG	3 cut(s)	443, 1560, 1827
PspFI	CCCAGC	2 cut(s)	1589, 2287
PspGI	CCWGG	3 cut(s)	443, 1560, 1827
PspN4I	GGNNCC	4 cut(s)	14, 425, 2274, 2285
PspPI	GGNCC	6 cut(s)	12, 667, 860, 1456, 2080, 2272
PspPPI	RGGWCCY	1 cut(s)	667
PsuI	RGATCY	1 cut(s)	52
PvuII	CAGCTG	1 cut(s)	1466
RsaI	GTAC	6 cut(s)	204, 425, 586, 1447, 1984, 2336
RsaNI	GTAC	6 cut(s)	203, 424, 585, 1446, 1983, 2335
RseI	CAYNNNNRTG	1 cut(s)	2144
SapI	GCTCTTC	1 cut(s)	1482
SatI	GCNGC	7 cut(s)	392, 413, 576, 808, 1294, 1464, 2151
Sau96I	GGNCC	6 cut(s)	12, 667, 860, 1456, 2080, 2272
ScrFI	CCNGG	6 cut(s)	445, 653, 654, 1460, 1562, 1829
SduI	GDGCHC	2 cut(s)	562, 1786
SfaNI	GCATC	2 cut(s)	250, 937
SfcI	CTRYAG	3 cut(s)	1147, 1261, 2454
Sfr274I	CTCGAG	1 cut(s)	56
SinI	GGWCC	5 cut(s)	12, 667, 860, 2080, 2272
SlaI	CTCGAG	1 cut(s)	56
SmaI	CCCGGG	1 cut(s)	654
SmiMI	CAYNNNNRTG	1 cut(s)	2144
SmlI	CTYRAG	2 cut(s)	56, 1939
SmoI	CTYRAG	2 cut(s)	56, 1939
SnaBI	TACGTA	1 cut(s)	1578
SspI	AATATT	1 cut(s)	703
SspMI	CTAG	4 cut(s)	1485, 1514, 1686, 2154
StyD4I	CCNGG	6 cut(s)	443, 651, 652, 1458, 1560, 1827
StyI	CCWWGG	3 cut(s)	679, 2098, 2145
TaiI	ACGT	5 cut(s)	1108, 1281, 1447, 1580, 1770
TaqI	TCGA	5 cut(s)	38, 57, 785, 1321, 1856
TaqII	GACCGA	1 cut(s)	2483
TatI	WGTACW	3 cut(s)	584, 1982, 2334
TauI	GCSGC	2 cut(s)	394, 415
TfiI	GAWTC	7 cut(s)	28, 116, 481, 917, 1063, 1541, 2358
TscAI	CASTG	5 cut(s)	626, 754, 1209, 1307, 2382
TseFI	GTSAC	4 cut(s)	140, 1256, 1771, 1837
TseI	GCWGC	5 cut(s)	575, 807, 1293, 1463, 2150
Tsp45I	GTSAC	4 cut(s)	140, 1256, 1771, 1837
TspDTI	ATGAA	9 cut(s)	99, 342, 731, 909, 1554, 1616, 2008, 2309, 2350
TspMI	CCCGGG	1 cut(s)	652
TspRI	CASTG	5 cut(s)	626, 754, 1209, 1307, 2382
VneI	GTGCAC	1 cut(s)	1782
VpaK11BI	GGWCC	5 cut(s)	12, 667, 860, 2080, 2272
VspI	ATTAAT	1 cut(s)	1598
XagI	CCTNNNNNAGG	1 cut(s)	1643
XapI	RAATTY	7 cut(s)	131, 434, 1221, 1266, 1568, 2174, 2316
XceI	RCATGY	3 cut(s)	1790, 1854, 2261
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1184
XhoI	CTCGAG	1 cut(s)	56
XmaI	CCCGGG	1 cut(s)	652
XmiI	GTMKAC	1 cut(s)	675
XspI	CTAG	4 cut(s)	1485, 1514, 1686, 2154

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.