Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004692

Physical Location & Seq

Genomic Coordinates Reverse (-)

72155349 .. 72160762

Gene Structure 5414 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021126

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2682 bp

ATGGAGCTCCGTTCTCGTAAAAGGCTCTCCGGCGCCGATTCCGATGGGATTGAGCAGCGTGAGGAGGATGGGAATAGCGAGAGCAGTGGGAGCTCTGATGAGGAAATCTATATGCCCATTTCTTCGGATTCGTCTTCTGATAGTGAAGGTGAAGATAACCAACAGAATGAGGAGGTGACTATTAACTTAAATGATAGACCAAAGGGCAAATTGAAGGAGCCCTTGCGAAAAAAGGGGAAGGTCGAGCAAAAGAAGAGAAGAGAACAACCAAGTTCTGAAGAGGAAGTAGTGGATTATGGCAGTTTTGATGAATTACAATTGACTCCGCAAAAAGCAGTTGAAATCGACTTTCTTGGCTTGACAAGGAGAATCAAGAAAAAGAAGTCAAGATCTGGTGGGCAAAAGCCAATTCTAATGTGGAATGTCTGGGAAGATGAGCATGATAAATGGATTGATGAGAATTTATCAGAAGATTTTGATCTCGATATTCAGAATAATGTGGTAAATGAAGTTGCTGAGACACCGTCTGATTTGATTATGCCTCTACTGAGGTATCAGAAGGAGTGGTTGGCTTGGGCTCTGAGACAGGAAGAGTCTGAAACTAGAGGAGGAATCCTTGCAGATGAGATGGGAATGGGGAAGACTATACAAGCGATTGCACTTGTACTTGCTAAACGGGAGATCAACTGGACATTTTATGAACCAGGATCCTCTACAGGCTTGCCTCACATTAAAGGAACCCTTGTAGTTTGTCCTGTGGTTGCTGTAAGCCAGTGGGTAAGTGAGATAGAGCGCTTTACTTCAAAAGGAAGTACAAAGATCCTGGTGTATCATGGAGCCAATAGAGAGAAGAGTTCCAAACAGTTCTTGGAGTATGATTTTGTCATTACAACGTACTCCACTGTTGAAGCTGATTATAGGAAGCATGTGATGCCTCCCAAAGAAAAGTGCCCATATTGTGGGAAGTTGTTTTATGAGACAAAAATGTCTATCCACTTGAAATACTTTTGTGGGCCTAATGCTATCAGAACTGAGAAGCAGTCTAAGCAACAAAGGAAAAAGCATCTGCCATCAAAGAAGACATGTGAGTCTTCTAAAGAAAAGATCAGTGGAAGTTCGGGCACGAAGAAAGGAGCTCGCAGAAAAGGATCAAAGCTGCAGAAAGATGATGATATGGATTCAGAAGATGTTGTACGGGACATGAACAAAAAGAATTCAGTTTTGCATGCTGTGAAGTGGAACCGGATCATTTTGGATGAGGCACATTATATAAAATCTAGGCGTTGCAATACTGCAAAAGCTGTTCTTGCTTTAGAGTCTACATATAAATGGGCTCTAAGCGGCACGCCTCTTCAGAATCGTGTTGGAGAACTTTACTCATTGGTCCGCTTCTTGCAATTAGTCCCATACTCATATTACTTGTGCAAGGACTGTGACTGCAGAACTCTTGATCATAGTTCCACACCACAATGTTCGAATTGCCCTCATAGTTCTGTTAGACATTTTTGTTGGTGGAATAAAAATGTGGCCACACCAATACAATTATTTGGAAATTCATATAATGGAAAAAGAGCCATGATATTGCTAAAACACAAGATCTTAAAGAACATAGTGCTGCGACGAACTAAAAAGGGAAGGGCTGCTGACCTTGCACTTCCTCCTCGAATTGTTTCATTGAGGAAGGATACCTTGGATATCAAAGAACAAGATTACTATGAGTCATTATATACAGATAGTCAGGCATTATTTAACACATATGTTGATGCGGGAACTCTTATGAATAATTATGCTCACATCTTTGATCTTCTCACACGCTTGCGGCAGGCTGTTGATCATCCTTACCTTGTTGTGTATTCTGCAACTGCTGCTTTAAGAAATGGAAACAAGGCTAATATTGATAACACTGAGAAAGTTTGTGGCATTTGTCATGATCCAGCAGAAGATCAAGTGGTTACTGCTTGTGAACATGTCTTTTGCAAGGCATGCTTAATTGATTTTTCTGCTTCCCTGGGACAAGTTTCATGCCCTTCATGCTCAAAATTGCTTACTGTGGATCTGACTACAAGTGTGGGTGCTGGTAATCAGACTACTAAAACTACCATTAAGGGTTTTAGATCCTCAAGCATTTTGAACAGAATTCAGCTTGAGAATTTTCAGACTAGCACAAAAATAGAGGCTTTGAAAGAAGAAATCAGATTCATGGTTGAAAGAGATGGTTCTGCAAAGGGAATTGTTTTTAGCCAGTTCACATCATTCTTGGATCTCATTCACTACTCCTTGCAAAAGTCGGGTGTCAACTGTGTTCAGTTGGTTGGAAGCATGACCATGTCTGCGAGGGATACTGCTATAAAGAGATTCACTGAGGATCCAGATTGCAGAATTTTCTTAATGAGCTTGAAAGCCGGAGGTGTTGCTCTTAATCTTACAGTCGCATCACATGTTTTCTTGATGGACCCATGGTGGAATCCAGCTGTGGAGCGGCAAGCACAAGATAGAATCCACCGGATAGGGCAGTACAAACCGATCAGAATTGTGAGATTTATAATTGAGAACACAATTGAGGAAAGGATTTTGAAGCTACAGGAGAAGAAGGAACTAGTGTTTGAGGGCACCATTGGTGGTTCTTCAGAGGCTCTCGGGAAATTGACTGAAGCTGACTTGAAATTCTTGTTTGTCACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000109 GO:0000166 GO:0000720 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004842 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006290 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009987 GO:0016043 GO:0016462 GO:0016567 GO:0016740 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019538 GO:0019787 GO:0030554 GO:0032392 GO:0032446 GO:0032508 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0033554 GO:0034641 GO:0035639 GO:0036094 GO:0036211 GO:0042623 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0050896 GO:0051276 GO:0051716 GO:0061630 GO:0061659 GO:0070035 GO:0070647 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097367 GO:0140096 GO:0140097 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1990391

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX

Protein Analysis

894

Amino Acids

101.33

Weight (kDa)

8.6

Isoelectric Point (pI)

49.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SNF2-rel_dom	PF00176	185 - 471	4.1e-49	SNF2-related domain
zf-RING_UBOX	PF13445	639 - 676	4.1e-06	RING-type zinc-finger
zf-C3HC4	PF00097	639 - 678	7.6e-06	Zinc finger, C3HC4 type (RING finger)
Helicase_C	PF00271	723 - 837	1.2e-19	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004692)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G05120 AT1G05120
fragaria_vesca	FvH4_6g42970 FvH4_6g42970
malus_domestica	MD17G1098500.v1.1
prunus_persica	Prupe.3G215900_v2.0.a1 Prupe.3G215900_v2.0.a1
pyrus_communis	pycom09g03310 pycom17g09390
rosa_chinensis	RchiOBHm_Chr2g0158951
rosa_laevigata	RLG00000021126
rosa_multiflora	Rmu_sc0002845.1_g000016 Rmu_sc0007967.1_g000006 Rmu_sc0013139.1_g000001 Rmu_sc0030100.1_g000001
rosa_roxburghii	Rroxscaffold_1G00030500 Rroxscaffold_2G00090850
rosa_rugosa	Rorug02G0473200
rosa_samantha	Rh2AG539700 Rh2BG552600 Rh2CG523000 Rh2DG562300
rosa_wichuraiana	Rw2G044670 Rw7G039330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2543
AasI	GACNNNNNNGTC	2 cut(s)	985, 1087
AccB1I	GGYRCC	2 cut(s)	32, 2609
AccB7I	CCANNNNNTGG	1 cut(s)	959
AccBSI	CCGCTC	1 cut(s)	2479
AccI	GTMKAC	1 cut(s)	1319
AciI	CCGC	6 cut(s)	326, 1341, 1387, 1766, 1819, 2479
AcoI	YGGCCR	1 cut(s)	1527
AcsI	RAATTY	7 cut(s)	460, 1213, 1552, 2136, 2149, 2379, 2663
AcuI	CTGAAG	4 cut(s)	297, 1337, 2610, 2670
AcyI	GRCGYC	1 cut(s)	33
AfaI	GTAC	5 cut(s)	666, 814, 896, 1194, 2516
AfeI	AGCGCT	1 cut(s)	794
AfiI	CCNNNNNNNGG	1 cut(s)	959
AflIII	ACRYGT	3 cut(s)	1082, 1966, 2437
AhlI	ACTAGT	1 cut(s)	2596
AjnI	CCWGG	3 cut(s)	703, 822, 2007
AjuI	GAANNNNNNNTTGG	4 cut(s)	551, 583, 1673, 1705
Alw21I	GWGCWC	3 cut(s)	9, 95, 1138
Alw26I	GTCTC	3 cut(s)	512, 577, 971
Ama87I	CYCGRG	1 cut(s)	2636
Aor51HI	AGCGCT	1 cut(s)	794
AoxI	GGCC	2 cut(s)	1013, 1527
ApeKI	GCWGC	5 cut(s)	55, 1156, 1615, 1640, 1865
ApoI	RAATTY	7 cut(s)	460, 1213, 1552, 2136, 2149, 2379, 2663
Asp700I	GAANNNNTTC	1 cut(s)	1669
AspLEI	GCGC	2 cut(s)	35, 795
AspS9I	GGNCC	3 cut(s)	1013, 1384, 2452
AsuHPI	GGTGA	3 cut(s)	161, 187, 2668
AsuII	TTCGAA	1 cut(s)	1475
AvaI	CYCGRG	1 cut(s)	2636
AvaII	GGWCC	2 cut(s)	1384, 2452
BaeGI	GKGCMC	3 cut(s)	953, 1124, 2612
BaeI	ACNNNNGTAYC	2 cut(s)	536, 569
BalI	TGGCCA	1 cut(s)	1529
BamHI	GGATCC	2 cut(s)	707, 2365
BanI	GGYRCC	2 cut(s)	32, 2609
BanII	GRGCYC	6 cut(s)	9, 95, 222, 580, 1138, 1336
BarI	GAAGNNNNNNTAC	2 cut(s)	1176, 1208
BbsI	GAAGAC	4 cut(s)	126, 647, 1083, 1085
Bbv12I	GWGCWC	3 cut(s)	9, 95, 1138
BbvI	GCAGC	5 cut(s)	67, 1143, 1602, 1627, 1852
BccI	CCATC	6 cut(s)	38, 62, 622, 1078, 2207, 2443
BciT130I	CCWGG	3 cut(s)	705, 824, 2009
BciVI	GTATCC	2 cut(s)	1678, 2332
BclI	TGATCA	2 cut(s)	1450, 1831
BcoDI	GTCTC	3 cut(s)	512, 577, 971
BcuI	ACTAGT	1 cut(s)	2596
BfaI	CTAG	4 cut(s)	603, 1278, 2160, 2597
BfmI	CTRYAG	4 cut(s)	714, 1157, 1438, 2579
BfoI	RGCGCY	2 cut(s)	36, 796
BfuI	GTATCC	2 cut(s)	1678, 2332
BglII	AGATCT	2 cut(s)	389, 1596
BisI	GCNGC	8 cut(s)	56, 1157, 1342, 1616, 1641, 1820, 1866, 2480
BlsI	GCNGC	8 cut(s)	57, 1158, 1343, 1617, 1642, 1821, 1867, 2481
Bme1390I	CCNGG	3 cut(s)	705, 824, 2009
Bme18I	GGWCC	2 cut(s)	1384, 2452
BmeT110I	CYCGRG	1 cut(s)	2636
BmgT120I	GGNCC	3 cut(s)	1013, 1384, 2452
BmiI	GGNNCC	9 cut(s)	34, 219, 709, 739, 838, 1241, 2367, 2454, 2611
BmrFI	CCNGG	3 cut(s)	705, 824, 2009
BmsI	GCATC	4 cut(s)	921, 1072, 1753, 2441
BpiI	GAAGAC	4 cut(s)	126, 647, 1083, 1085
Bpu14I	TTCGAA	1 cut(s)	1475
BpuEI	CTTGAG	2 cut(s)	2104, 2165
BsaBI	GATNNNNATC	1 cut(s)	477
BsaHI	GRCGYC	1 cut(s)	33
BsaJI	CCNNGG	4 cut(s)	1689, 2007, 2008, 2456
BsaWI	WCCGGW	2 cut(s)	1242, 2502
Bsc4I	CCNNNNNNNGG	1 cut(s)	959
Bse1I	ACTGG	3 cut(s)	692, 772, 2242
Bse8I	GATNNNNATC	1 cut(s)	477
BseBI	CCWGG	3 cut(s)	705, 824, 2009
BseDI	CCNNGG	4 cut(s)	1689, 2007, 2008, 2456
BseGI	GGATG	3 cut(s)	73, 1261, 1834
BseJI	GATNNNNATC	1 cut(s)	477
BseLI	CCNNNNNNNGG	1 cut(s)	959
BseMII	CTCAG	6 cut(s)	507, 539, 572, 1023, 1896, 2352
BseNI	ACTGG	3 cut(s)	692, 772, 2242
BseRI	GAGGAG	4 cut(s)	77, 185, 621, 1650
BseSI	GKGCMC	3 cut(s)	953, 1124, 2612
BseXI	GCAGC	5 cut(s)	67, 1143, 1602, 1627, 1852
BshFI	GGCC	2 cut(s)	1015, 1529
BshNI	GGYRCC	2 cut(s)	32, 2609
BsiHKAI	GWGCWC	3 cut(s)	9, 95, 1138
BsiHKCI	CYCGRG	1 cut(s)	2636
BsiSI	CCGG	4 cut(s)	30, 1243, 2403, 2503
BslFI	GGGAC	3 cut(s)	1211, 1388, 2025
BslI	CCNNNNNNNGG	1 cut(s)	959
BsmAI	GTCTC	3 cut(s)	512, 577, 971
BsmFI	GGGAC	3 cut(s)	1211, 1388, 2025
BsnI	GGCC	2 cut(s)	1015, 1529
BsoBI	CYCGRG	1 cut(s)	2636
Bsp119I	TTCGAA	1 cut(s)	1475
Bsp1286I	GDGCHC	9 cut(s)	9, 95, 222, 580, 953, 1124, 1138, 1336, 2612
Bsp19I	CCATGG	1 cut(s)	2456
BspACI	CCGC	6 cut(s)	326, 1341, 1387, 1766, 1819, 2479
BspANI	GGCC	2 cut(s)	1015, 1529
BspCNI	CTCAG	6 cut(s)	508, 540, 573, 1024, 1897, 2353
BspHI	TCATGA	1 cut(s)	1927
BspLI	GGNNCC	9 cut(s)	34, 219, 709, 739, 838, 1241, 2367, 2454, 2611
BspMAI	CTGCAG	2 cut(s)	1161, 1442
BspT104I	TTCGAA	1 cut(s)	1475
BspT107I	GGYRCC	2 cut(s)	32, 2609
BsrBI	CCGCTC	1 cut(s)	2479
BsrI	ACTGG	3 cut(s)	692, 772, 2242
BssECI	CCNNGG	4 cut(s)	1689, 2007, 2008, 2456
BssNI	GRCGYC	1 cut(s)	33
BssT1I	CCWWGG	2 cut(s)	1689, 2456
Bst2UI	CCWGG	3 cut(s)	705, 824, 2009
Bst4CI	ACNGT	7 cut(s)	525, 864, 904, 1433, 2050, 2300, 2428
Bst6I	CTCTTC	6 cut(s)	248, 253, 273, 585, 845, 1356
BstACI	GRCGYC	1 cut(s)	33
BstAPI	GCANNNNNTGC	3 cut(s)	931, 1865, 1983
BstBI	TTCGAA	1 cut(s)	1475
BstC8I	GCNNGC	8 cut(s)	722, 1138, 1227, 1346, 1817, 1824, 1984, 2484
BstDEI	CTNAG	8 cut(s)	516, 548, 581, 1032, 1044, 1337, 1905, 2361
BstDSI	CCRYGG	1 cut(s)	2456
BstF5I	GGATG	3 cut(s)	73, 1261, 1834
BstH2I	RGCGCY	2 cut(s)	36, 796
BstHHI	GCGC	2 cut(s)	35, 795
BstMAI	GTCTC	3 cut(s)	512, 577, 971
BstMWI	GCNNNNNNNGC	8 cut(s)	90, 931, 1045, 1307, 1649, 1865, 1983, 2031
BstNI	CCWGG	3 cut(s)	705, 824, 2009
BstNSI	RCATGY	6 cut(s)	929, 1086, 1229, 1970, 1986, 2441
BstSCI	CCNGG	3 cut(s)	703, 822, 2007
BstSFI	CTRYAG	4 cut(s)	714, 1157, 1438, 2579
BstSLI	GKGCMC	3 cut(s)	953, 1124, 2612
BstV1I	GCAGC	5 cut(s)	67, 1143, 1602, 1627, 1852
BstV2I	GAAGAC	4 cut(s)	126, 647, 1083, 1085
BstX2I	RGATCY	8 cut(s)	389, 707, 819, 1596, 2053, 2114, 2260, 2365
BstYI	RGATCY	8 cut(s)	389, 707, 819, 1596, 2053, 2114, 2260, 2365
BsuI	GTATCC	2 cut(s)	1678, 2332
BsuRI	GGCC	2 cut(s)	1015, 1529
BtgI	CCRYGG	1 cut(s)	2456
BtsCI	GGATG	3 cut(s)	73, 1261, 1834
BtsI	GCAGTG	1 cut(s)	91
BtsIMutI	CAGTG	6 cut(s)	91, 779, 900, 1114, 1902, 2358
Cac8I	GCNNGC	8 cut(s)	722, 1138, 1227, 1346, 1817, 1824, 1984, 2484
CciI	TCATGA	1 cut(s)	1927
CfoI	GCGC	2 cut(s)	35, 795
Cfr13I	GGNCC	3 cut(s)	1013, 1384, 2452
Csp6I	GTAC	5 cut(s)	665, 813, 895, 1193, 2515
CviQI	GTAC	5 cut(s)	665, 813, 895, 1193, 2515
DdeI	CTNAG	8 cut(s)	516, 548, 581, 1032, 1044, 1337, 1905, 2361
DinI	GGCGCC	1 cut(s)	34
DrdI	GACNNNNNNGTC	2 cut(s)	985, 1087
DseDI	GACNNNNNNGTC	2 cut(s)	985, 1087
EaeI	YGGCCR	1 cut(s)	1527
Eam1104I	CTCTTC	6 cut(s)	248, 253, 273, 585, 845, 1356
EarI	CTCTTC	6 cut(s)	248, 253, 273, 585, 845, 1356
Ecl136II	GAGCTC	3 cut(s)	7, 93, 1136
Eco130I	CCWWGG	2 cut(s)	1689, 2456
Eco24I	GRGCYC	6 cut(s)	9, 95, 222, 580, 1138, 1336
Eco32I	GATATC	1 cut(s)	1696
Eco47I	GGWCC	2 cut(s)	1384, 2452
Eco47III	AGCGCT	1 cut(s)	794
Eco53kI	GAGCTC	3 cut(s)	7, 93, 1136
Eco57I	CTGAAG	4 cut(s)	297, 1337, 2610, 2670
Eco88I	CYCGRG	1 cut(s)	2636
EcoICRI	GAGCTC	3 cut(s)	7, 93, 1136
EcoRI	GAATTC	2 cut(s)	1213, 2136
EcoRII	CCWGG	3 cut(s)	703, 822, 2007
EcoRV	GATATC	1 cut(s)	1696
EcoT14I	CCWWGG	2 cut(s)	1689, 2456
EcoT38I	GRGCYC	6 cut(s)	9, 95, 222, 580, 1138, 1336
EgeI	GGCGCC	1 cut(s)	34
EheI	GGCGCC	1 cut(s)	34
ErhI	CCWWGG	2 cut(s)	1689, 2456
FaqI	GGGAC	3 cut(s)	1211, 1388, 2025
FauI	CCCGC	1 cut(s)	1759
FauNDI	CATATG	1 cut(s)	1756
FbaI	TGATCA	2 cut(s)	1450, 1831
FblI	GTMKAC	1 cut(s)	1319
Fnu4HI	GCNGC	8 cut(s)	56, 1157, 1342, 1616, 1641, 1820, 1866, 2480
FokI	GGATG	3 cut(s)	80, 1268, 1821
FriOI	GRGCYC	6 cut(s)	9, 95, 222, 580, 1138, 1336
Fsp4HI	GCNGC	8 cut(s)	56, 1157, 1342, 1616, 1641, 1820, 1866, 2480
FspBI	CTAG	4 cut(s)	603, 1278, 2160, 2597
GlaI	GCGC	2 cut(s)	34, 794
GluI	GCNGC	8 cut(s)	56, 1157, 1342, 1616, 1641, 1820, 1866, 2480
HaeII	RGCGCY	2 cut(s)	36, 796
HaeIII	GGCC	2 cut(s)	1015, 1529
HapII	CCGG	4 cut(s)	30, 1243, 2403, 2503
HhaI	GCGC	2 cut(s)	35, 795
Hin1I	GRCGYC	1 cut(s)	33
Hin6I	GCGC	2 cut(s)	33, 793
HinP1I	GCGC	2 cut(s)	33, 793
HincII	GTYRAC	1 cut(s)	2296
HindII	GTYRAC	1 cut(s)	2296
HpaII	CCGG	4 cut(s)	30, 1243, 2403, 2503
HphI	GGTGA	3 cut(s)	161, 187, 2668
Hpy166II	GTNNAC	4 cut(s)	1320, 1964, 2247, 2296
Hpy188III	TCNNGA	8 cut(s)	373, 387, 482, 1448, 1928, 2369, 2446, 2638
Hpy8I	GTNNAC	4 cut(s)	1320, 1964, 2247, 2296
Hpy99I	CGWCG	1 cut(s)	1623
HpyAV	CCTTC	8 cut(s)	140, 208, 232, 553, 1629, 1675, 2037, 2584
HpyCH4III	ACNGT	7 cut(s)	525, 864, 904, 1433, 2050, 2300, 2428
HpyCH4IV	ACGT	1 cut(s)	893
HpyF10VI	GCNNNNNNNGC	8 cut(s)	90, 931, 1045, 1307, 1649, 1865, 1983, 2031
HpyF3I	CTNAG	8 cut(s)	516, 548, 581, 1032, 1044, 1337, 1905, 2361
HpySE526I	ACGT	1 cut(s)	893
Hsp92I	GRCGYC	1 cut(s)	33
HspAI	GCGC	2 cut(s)	33, 793
KasI	GGCGCC	1 cut(s)	32
Ksp22I	TGATCA	2 cut(s)	1450, 1831
LmnI	GCTCC	7 cut(s)	4, 12, 90, 217, 836, 1133, 2476
Lsp1109I	GCAGC	5 cut(s)	67, 1143, 1602, 1627, 1852
LweI	GCATC	4 cut(s)	921, 1072, 1753, 2441
MaeI	CTAG	4 cut(s)	603, 1278, 2160, 2597
MaeII	ACGT	1 cut(s)	893
MaeIII	GTNAC	4 cut(s)	175, 1433, 1951, 2674
MbiI	CCGCTC	1 cut(s)	2479
MfeI	CAATTG	2 cut(s)	317, 2556
MflI	RGATCY	8 cut(s)	389, 707, 819, 1596, 2053, 2114, 2260, 2365
MhlI	GDGCHC	9 cut(s)	9, 95, 222, 580, 953, 1124, 1138, 1336, 2612
MlsI	TGGCCA	1 cut(s)	1529
MluNI	TGGCCA	1 cut(s)	1529
Mly113I	GGCGCC	1 cut(s)	33
MlyI	GAGTC	5 cut(s)	316, 602, 1097, 1325, 1727
MmeI	TCCRAC	2 cut(s)	1345, 2293
Mox20I	TGGCCA	1 cut(s)	1529
MroXI	GAANNNNTTC	1 cut(s)	1669
MscI	TGGCCA	1 cut(s)	1529
MslI	CAYNNNNRTG	3 cut(s)	1327, 1468, 2324
Msp20I	TGGCCA	1 cut(s)	1529
MspA1I	CMGCKG	1 cut(s)	2471
MspI	CCGG	4 cut(s)	30, 1243, 2403, 2503
MspR9I	CCNGG	3 cut(s)	705, 824, 2009
MunI	CAATTG	2 cut(s)	317, 2556
MvaI	CCWGG	3 cut(s)	705, 824, 2009
MwoI	GCNNNNNNNGC	8 cut(s)	90, 931, 1045, 1307, 1649, 1865, 1983, 2031
NarI	GGCGCC	1 cut(s)	33
NcoI	CCATGG	1 cut(s)	2456
NdeI	CATATG	1 cut(s)	1756
NlaIV	GGNNCC	9 cut(s)	34, 219, 709, 739, 838, 1241, 2367, 2454, 2611
NmuCI	GTSAC	3 cut(s)	175, 1433, 2674
NspI	RCATGY	6 cut(s)	929, 1086, 1229, 1970, 1986, 2441
NspV	TTCGAA	1 cut(s)	1475
PaeI	GCATGC	2 cut(s)	1229, 1986
PagI	TCATGA	1 cut(s)	1927
PasI	CCCWGGG	1 cut(s)	2008
PciI	ACATGT	3 cut(s)	1082, 1966, 2437
PdmI	GAANNNNTTC	1 cut(s)	1669
PflFI	GACNNNGTC	2 cut(s)	523, 2326
PflMI	CCANNNNNTGG	1 cut(s)	959
PkrI	GCNGC	8 cut(s)	57, 1158, 1343, 1617, 1642, 1821, 1867, 2481
PleI	GAGTC	5 cut(s)	316, 601, 1096, 1324, 1726
PluTI	GGCGCC	1 cut(s)	36
PpsI	GAGTC	5 cut(s)	316, 601, 1096, 1324, 1726
PscI	ACATGT	3 cut(s)	1082, 1966, 2437
PsiI	TTATAA	1 cut(s)	2543
Psp124BI	GAGCTC	3 cut(s)	9, 95, 1138
Psp6I	CCWGG	3 cut(s)	703, 822, 2007
PspGI	CCWGG	3 cut(s)	703, 822, 2007
PspN4I	GGNNCC	9 cut(s)	34, 219, 709, 739, 838, 1241, 2367, 2454, 2611
PspPI	GGNCC	3 cut(s)	1013, 1384, 2452
PstI	CTGCAG	2 cut(s)	1161, 1442
PsuI	RGATCY	8 cut(s)	389, 707, 819, 1596, 2053, 2114, 2260, 2365
PsyI	GACNNNGTC	2 cut(s)	523, 2326
PvuII	CAGCTG	1 cut(s)	2471
RsaI	GTAC	5 cut(s)	666, 814, 896, 1194, 2516
RsaNI	GTAC	5 cut(s)	665, 813, 895, 1193, 2515
RseI	CAYNNNNRTG	3 cut(s)	1327, 1468, 2324
SacI	GAGCTC	3 cut(s)	9, 95, 1138
SatI	GCNGC	8 cut(s)	56, 1157, 1342, 1616, 1641, 1820, 1866, 2480
Sau96I	GGNCC	3 cut(s)	1013, 1384, 2452
SchI	GAGTC	5 cut(s)	316, 602, 1097, 1325, 1727
ScrFI	CCNGG	3 cut(s)	705, 824, 2009
SduI	GDGCHC	9 cut(s)	9, 95, 222, 580, 953, 1124, 1138, 1336, 2612
SfaNI	GCATC	4 cut(s)	921, 1072, 1753, 2441
SfcI	CTRYAG	4 cut(s)	714, 1157, 1438, 2579
SfoI	GGCGCC	1 cut(s)	34
SfuI	TTCGAA	1 cut(s)	1475
SinI	GGWCC	2 cut(s)	1384, 2452
SmiMI	CAYNNNNRTG	3 cut(s)	1327, 1468, 2324
SmlI	CTYRAG	2 cut(s)	2119, 2144
SmoI	CTYRAG	2 cut(s)	2119, 2144
SpeI	ACTAGT	1 cut(s)	2596
SphI	GCATGC	2 cut(s)	1229, 1986
SsiI	CCGC	6 cut(s)	326, 1341, 1387, 1766, 1819, 2479
SspDI	GGCGCC	1 cut(s)	32
SspI	AATATT	1 cut(s)	1894
SspMI	CTAG	4 cut(s)	603, 1278, 2160, 2597
SstI	GAGCTC	3 cut(s)	9, 95, 1138
StyD4I	CCNGG	3 cut(s)	703, 822, 2007
StyI	CCWWGG	2 cut(s)	1689, 2456
TaaI	ACNGT	7 cut(s)	525, 864, 904, 1433, 2050, 2300, 2428
TaiI	ACGT	1 cut(s)	896
TaqI	TCGA	5 cut(s)	243, 345, 483, 1475, 1663
TatI	WGTACW	3 cut(s)	664, 812, 2514
TauI	GCSGC	3 cut(s)	1344, 1822, 2482
TscAI	CASTG	6 cut(s)	91, 779, 907, 1114, 1909, 2365
TseFI	GTSAC	3 cut(s)	175, 1433, 2674
TseI	GCWGC	5 cut(s)	55, 1156, 1615, 1640, 1865
Tsp45I	GTSAC	3 cut(s)	175, 1433, 2674
TspRI	CASTG	6 cut(s)	91, 779, 907, 1114, 1909, 2365
Tth111I	GACNNNGTC	2 cut(s)	523, 2326
Van91I	CCANNNNNTGG	1 cut(s)	959
VpaK11BI	GGWCC	2 cut(s)	1384, 2452
XapI	RAATTY	7 cut(s)	460, 1213, 1552, 2136, 2149, 2379, 2663
XceI	RCATGY	6 cut(s)	929, 1086, 1229, 1970, 1986, 2441
XcmI	CCANNNNNNNNNTGG	2 cut(s)	414, 865
XmiI	GTMKAC	1 cut(s)	1319
XmnI	GAANNNNTTC	1 cut(s)	1669
XspI	CTAG	4 cut(s)	603, 1278, 2160, 2597

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.