Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0004692

Physical Location & Seq

Genomic Coordinates Reverse (-)

33338789 .. 33344680

Gene Structure 5892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g42970.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2718 bp

ATGGAGCTCCGTTCTCGCAAGAGGCTCTCCGGCGCCGATACCGATGGAATTGAGCAACGTGTGGAGGAGGAGGAGGAGGTTGGGGGTAGCGAGAGTGGTGGAGTCTCTTTGTCTGAGGTGGAAGCCTATTCGTCTGATTCGGGTTTGGGTTCGGGTTCTGATAGTGAAGGTGAAGATAACCTATTTGATGTGGAGACGGTTATTAACTTAAATGATAGACCAAAAGGCAAATTGAAGGAGCCTTTGCGAGGGAAGGGGGAGGTCAAGCAAAAGAAGAAAAGAGGACAACCAAGTTCAGATGAGGAAGTGGTGGATTATGACATTTTTGATGATCATAATTTTAATGAATTGCAGCTTATTCCTCAACAAGCACTCGAAATCGACTTTCTTGGCTTGACAACGAAAAGCAAGAGAAGGAAGTCAAAATCTGGTCGGCGAAAGCCAATTCTTATGTGGAACATCTGGGAAGATGAGCATAATAAATGGATCGATGAGAATTTCTCTGAGGATTTTGATCTCGATGCTCAGAATAATGTGGTAAATGAAGTTGTTGAGTCACCGTCTGATTTGATTATGCCTTTGCTGAGGTATCAGAAGGAGTGGTTGGCCTGGGCTCTAAGACAGGAAGAGTCTCAAACTAGAGGAGGAATCCTAGCAGATGAGATGGGAATGGGGAAGACTATTCAAGCGATTGCACTTGTACTGGCTAAACGGGAGATCAACTGGACATTAAATGAACCCCAACCCTCTACAGGCTTGCGTCACATTAAAGGAACCCTTGTAGTTTGTCCTGTGGTTGCTGTAAGCCAGTGGGTAAGTGAGATAGAGCGGTTTACTTCCAAAGGAAGTACAAAGATCCTGGTTTATCATGGAGCCAATAGAGAGAAGAGTTCCAAACAGTTCCTGGATTATGATTTCGTCATTACGACATACTCTATTGTTGAGGCTGATTATAGGAAGCATGTGATGCCTCCAAAAGAAAAGTGCCCATATTGTGGGAAGTTGTTTTATGAGACAAAAATGACTGTTCACTTGAAATACTTTTGTGGGCCTAATGCGATCAGAACTGAGAAGCAGTCTAAGCAACAAAGGAAAACACATCTGCCATCAAAGAAGACGTTAGAGTCTTCTAATGAAAAGATCAGTGGAAGTTCGGGCACAAAGAAAGGAGCTCACAAAAGAAAATCGAAGCTGCACAAAGACGATGATATGGATTCAGAAGATGTTGCACTGAACATGAATAAAGGGAATTCGGTTTTGCATGCTGTGAAGTGGAACCGGATCATTTTGGATGAGGCACATTATATAAAATCTAGGCGTTGCAATACTGCAAAAGCTGTTCTTGCTTTAGAGTCTACGTATAAATGGGCTCTAAGCGGCACGCCCCTTCAGAACCGTGTTGGAGAACTTTACTCATTGGTCCGCTTCTTGCAATTAGTGCCATACTCATATTACCTGTGTAAGGACTGTGACTGCAGAACTCTTGATCATAGTTCCACATCACAGTGTTCAAATTGCCCTCATAGTTCTGTCAGACATTTTTGTTGGTGGAATAAAAATGTGGCCACACCAATACAATTATTTGGAAATACATATAGTGGAAAAAGAGCCATGATATTACTAAAACACAAGATCTTAAAGAACATAGTGCTGCGACGAACTAAAAAGGGAAGGGCTGCTGACCTTGCACTTCCTCCTCGAATAGTTTCATTGAGGAAGGATACCTTGGATATCAAAGAACAAGATTATTATGAGTCATTATATACTGATAGTCAGGCATTATTTAACACATATGTTGATGCGGGAACTCTGATGAATAATTATGCTCACATCTTTGATCTTCTCACACGCTTGCGGCAGGCTGTTGATCATCCTTACCTTGTCGTGTATTCTGCAACTGCTGCATTAAGAATTGAAAACAAGGCTAATATTGATAACAGTGAGAAAATATGTGGCATTTGTCATGATCCAGCTGAAGATCAAGTGGTTACTGCTTGTGAACATGTCTTCTGCAAGGCATGCTTAATAGATTTTTCTGCTTCCCTGGGACAAGTTTCATGCCCTTCATGCTCGAAATTGCTCACTGTGGATCTGACAACAAGTGTAGGTGCTGGTAATCAGACTACTAAAACTACCATTAAGGGGTTCAGATCCTCGAGCATTTTGAACAGGATTCAGCTTGAGAATTTTCAGACTAGCACAAAAATAGAAGCTTTGAAAGAAGAAATCAGATTCATGGTTGAAAGAGATGGTTCCGCAAAGGGAATTGTTTTTAGCCAGTTCACATCATTCTTAGATCTCATTCACTACTCCTTGCAAAAGTCGGGCGTCAACTGCGTTCAGTTGGTTGGAAGCATGACCATGTCAGCAAGGGATAATGCTATAAAGAAATTCACTGAGGATCCAGATTGCAGAATTTTCTTAATGAGTTTGAAAGCCGGAGGTGTTGCTCTTAATCTTACAGTTGCATCACATGTTTTCTTGATGGACCCATGGTGGAATCCAGCTGTGGAGCGACAAGCACAAGATAGAATCCACCGGATAGGGCAGTACAAACCAATCAGAATTGTGAGATTCGTCATTGAGAACACAATTGAGGAGAGGATTTTGAAGCTACAGGAGAAGAAGGAGCTAGTGTTTGAGGGCACCATTGGTGGTTCTAGTGAGGCTCTCGGGAAATTGACTGAAGCTGACTTGAAATTCTTGTTCGTCACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000109 GO:0000166 GO:0000720 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004842 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006290 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009987 GO:0016043 GO:0016462 GO:0016567 GO:0016740 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019538 GO:0019787 GO:0030554 GO:0032392 GO:0032446 GO:0032508 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0033554 GO:0034641 GO:0035639 GO:0036094 GO:0036211 GO:0042623 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0050896 GO:0051276 GO:0051716 GO:0061630 GO:0061659 GO:0070035 GO:0070647 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097367 GO:0140096 GO:0140097 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1990391

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX

Protein Analysis

906

Amino Acids

102.38

Weight (kDa)

8.37

Isoelectric Point (pI)

48.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SNF2-rel_dom	PF00176	156 - 442	1.5e-49	SNF2-related domain
zf-RING_UBOX	PF13445	610 - 647	3.9e-06	RING-type zinc-finger
zf-C3HC4	PF00097	610 - 649	7.4e-06	Zinc finger, C3HC4 type (RING finger)
Helicase_C	PF00271	694 - 808	9.5e-20	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004692)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G05120 AT1G05120
fragaria_vesca	FvH4_6g42970 FvH4_6g42970
malus_domestica	MD17G1098500.v1.1
prunus_persica	Prupe.3G215900_v2.0.a1 Prupe.3G215900_v2.0.a1
pyrus_communis	pycom09g03310 pycom17g09390
rosa_chinensis	RchiOBHm_Chr2g0158951
rosa_laevigata	RLG00000021126
rosa_multiflora	Rmu_sc0002845.1_g000016 Rmu_sc0007967.1_g000006 Rmu_sc0013139.1_g000001 Rmu_sc0030100.1_g000001
rosa_roxburghii	Rroxscaffold_1G00030500 Rroxscaffold_2G00090850
rosa_rugosa	Rorug02G0473200
rosa_samantha	Rh2AG539700 Rh2BG552600 Rh2CG523000 Rh2DG562300
rosa_wichuraiana	Rw2G044670 Rw7G039330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1123
AccB1I	GGYRCC	2 cut(s)	32, 2645
AccB7I	CCANNNNNTGG	1 cut(s)	995
AccBSI	CCGCTC	1 cut(s)	829
AccI	GTMKAC	1 cut(s)	1355
AciI	CCGC	6 cut(s)	829, 1377, 1423, 1802, 1855, 2256
AclWI	GGATC	8 cut(s)	494, 850, 1289, 1961, 2097, 2145, 2396, 2409
AcoI	YGGCCR	1 cut(s)	1563
AcsI	RAATTY	6 cut(s)	496, 1249, 2185, 2390, 2415, 2699
AcuI	CTGAAG	3 cut(s)	1373, 1995, 2706
AcyI	GRCGYC	2 cut(s)	33, 2328
AfaI	GTAC	3 cut(s)	702, 850, 2552
AfiI	CCNNNNNNNGG	5 cut(s)	248, 752, 995, 1462, 2142
AflIII	ACRYGT	3 cut(s)	58, 2002, 2473
AjnI	CCWGG	4 cut(s)	608, 858, 903, 2043
AjuI	GAANNNNNNNTTGG	4 cut(s)	587, 619, 1709, 1741
Alw21I	GWGCWC	2 cut(s)	9, 1174
Alw26I	GTCTC	4 cut(s)	109, 188, 636, 1007
AlwI	GGATC	8 cut(s)	494, 850, 1289, 1961, 2097, 2145, 2396, 2409
AlwNI	CAGNNNCTG	1 cut(s)	904
Ama87I	CYCGRG	2 cut(s)	2155, 2672
AoxI	GGCC	3 cut(s)	606, 1049, 1563
ApeKI	GCWGC	5 cut(s)	352, 1192, 1651, 1676, 1901
ApoI	RAATTY	6 cut(s)	496, 1249, 2185, 2390, 2415, 2699
Asp700I	GAANNNNTTC	1 cut(s)	1705
AspLEI	GCGC	1 cut(s)	35
AspS9I	GGNCC	3 cut(s)	1049, 1420, 2488
AsuHPI	GGTGA	3 cut(s)	182, 549, 2704
AvaI	CYCGRG	2 cut(s)	2155, 2672
AvaII	GGWCC	2 cut(s)	1420, 2488
BaeGI	GKGCMC	3 cut(s)	989, 1160, 2648
BalI	TGGCCA	1 cut(s)	1565
BamHI	GGATCC	1 cut(s)	2401
BanI	GGYRCC	2 cut(s)	32, 2645
BanII	GRGCYC	4 cut(s)	9, 616, 1174, 1372
BbsI	GAAGAC	4 cut(s)	683, 1119, 1121, 1999
Bbv12I	GWGCWC	2 cut(s)	9, 1174
BbvCI	CCTCAGC	1 cut(s)	584
BbvI	GCAGC	5 cut(s)	364, 1179, 1638, 1663, 1888
BccI	CCATC	5 cut(s)	38, 658, 1114, 2243, 2479
BciT130I	CCWGG	4 cut(s)	610, 860, 905, 2045
BciVI	GTATCC	1 cut(s)	1714
BclI	TGATCA	3 cut(s)	331, 1486, 1867
BcoDI	GTCTC	4 cut(s)	109, 188, 636, 1007
BfaI	CTAG	6 cut(s)	639, 653, 1314, 2196, 2633, 2661
BfmI	CTRYAG	3 cut(s)	750, 1474, 2615
BfoI	RGCGCY	1 cut(s)	36
BfuI	GTATCC	1 cut(s)	1714
BglII	AGATCT	2 cut(s)	1632, 2296
BisI	GCNGC	7 cut(s)	353, 1193, 1378, 1652, 1677, 1856, 1902
BlsI	GCNGC	7 cut(s)	354, 1194, 1379, 1653, 1678, 1857, 1903
Bme1390I	CCNGG	4 cut(s)	610, 860, 905, 2045
Bme18I	GGWCC	2 cut(s)	1420, 2488
BmeT110I	CYCGRG	2 cut(s)	2155, 2672
BmgT120I	GGNCC	3 cut(s)	1049, 1420, 2488
BmiI	GGNNCC	9 cut(s)	34, 240, 775, 874, 1277, 2254, 2403, 2490, 2647
BmrFI	CCNGG	4 cut(s)	610, 860, 905, 2045
BmsI	GCATC	4 cut(s)	511, 957, 1789, 2477
BpiI	GAAGAC	4 cut(s)	683, 1119, 1121, 1999
BplI	GAGNNNNNCTC	2 cut(s)	485, 517
Bpu10I	CCTNAGC	1 cut(s)	584
BpuEI	CTTGAG	1 cut(s)	2201
Bsa29I	ATCGAT	1 cut(s)	489
BsaAI	YACGTR	1 cut(s)	1359
BsaBI	GATNNNNATC	1 cut(s)	513
BsaHI	GRCGYC	2 cut(s)	33, 2328
BsaJI	CCNNGG	5 cut(s)	609, 1725, 2043, 2044, 2492
BsaWI	WCCGGW	2 cut(s)	1278, 2538
BsaXI	ACNNNNNCTCC	2 cut(s)	2621, 2651
Bsc4I	CCNNNNNNNGG	5 cut(s)	248, 752, 995, 1462, 2142
Bse1I	ACTGG	4 cut(s)	708, 728, 808, 2278
Bse8I	GATNNNNATC	1 cut(s)	513
BseBI	CCWGG	4 cut(s)	610, 860, 905, 2045
BseCI	ATCGAT	1 cut(s)	489
BseDI	CCNNGG	5 cut(s)	609, 1725, 2043, 2044, 2492
BseGI	GGATG	2 cut(s)	1297, 1870
BseJI	GATNNNNATC	1 cut(s)	513
BseLI	CCNNNNNNNGG	5 cut(s)	248, 752, 995, 1462, 2142
BseMII	CTCAG	6 cut(s)	105, 495, 539, 575, 1059, 2388
BseNI	ACTGG	4 cut(s)	708, 728, 808, 2278
BseRI	GAGGAG	7 cut(s)	80, 83, 86, 89, 657, 1686, 2612
BseSI	GKGCMC	3 cut(s)	989, 1160, 2648
BseXI	GCAGC	5 cut(s)	364, 1179, 1638, 1663, 1888
BsgI	GTGCAG	1 cut(s)	1178
BshFI	GGCC	3 cut(s)	608, 1051, 1565
BshNI	GGYRCC	2 cut(s)	32, 2645
BshVI	ATCGAT	1 cut(s)	489
BsiHKAI	GWGCWC	2 cut(s)	9, 1174
BsiHKCI	CYCGRG	2 cut(s)	2155, 2672
BsiSI	CCGG	4 cut(s)	30, 1279, 2439, 2539
BslFI	GGGAC	1 cut(s)	2061
BslI	CCNNNNNNNGG	5 cut(s)	248, 752, 995, 1462, 2142
BsmAI	GTCTC	4 cut(s)	109, 188, 636, 1007
BsmBI	CGTCTC	1 cut(s)	188
BsmFI	GGGAC	1 cut(s)	2061
BsnI	GGCC	3 cut(s)	608, 1051, 1565
BsoBI	CYCGRG	2 cut(s)	2155, 2672
Bsp1286I	GDGCHC	7 cut(s)	9, 616, 989, 1160, 1174, 1372, 2648
Bsp19I	CCATGG	1 cut(s)	2492
BspACI	CCGC	6 cut(s)	829, 1377, 1423, 1802, 1855, 2256
BspANI	GGCC	3 cut(s)	608, 1051, 1565
BspCNI	CTCAG	6 cut(s)	106, 496, 538, 576, 1060, 2389
BspDI	ATCGAT	1 cut(s)	489
BspHI	TCATGA	1 cut(s)	1963
BspLI	GGNNCC	9 cut(s)	34, 240, 775, 874, 1277, 2254, 2403, 2490, 2647
BspMAI	CTGCAG	1 cut(s)	1478
BspPI	GGATC	8 cut(s)	494, 850, 1289, 1961, 2097, 2145, 2396, 2409
BspT107I	GGYRCC	2 cut(s)	32, 2645
BsrBI	CCGCTC	1 cut(s)	829
BsrI	ACTGG	4 cut(s)	708, 728, 808, 2278
BssECI	CCNNGG	5 cut(s)	609, 1725, 2043, 2044, 2492
BssNI	GRCGYC	2 cut(s)	33, 2328
BssT1I	CCWWGG	2 cut(s)	1725, 2492
Bst2UI	CCWGG	4 cut(s)	610, 860, 905, 2045
Bst6I	CTCTTC	2 cut(s)	621, 881
BstACI	GRCGYC	2 cut(s)	33, 2328
BstAPI	GCANNNNNTGC	4 cut(s)	967, 1438, 1901, 2019
BstBAI	YACGTR	1 cut(s)	1359
BstC8I	GCNNGC	6 cut(s)	758, 1263, 1382, 1853, 1860, 2020
BstDSI	CCRYGG	1 cut(s)	2492
BstENI	CCTNNNNNAGG	2 cut(s)	246, 1460
BstF5I	GGATG	2 cut(s)	1297, 1870
BstH2I	RGCGCY	1 cut(s)	36
BstHHI	GCGC	1 cut(s)	35
BstMAI	GTCTC	4 cut(s)	109, 188, 636, 1007
BstMWI	GCNNNNNNNGC	9 cut(s)	967, 1081, 1343, 1438, 1685, 1901, 2019, 2067, 2334
BstNI	CCWGG	4 cut(s)	610, 860, 905, 2045
BstNSI	RCATGY	5 cut(s)	965, 1265, 2006, 2022, 2477
BstSCI	CCNGG	4 cut(s)	608, 858, 903, 2043
BstSFI	CTRYAG	3 cut(s)	750, 1474, 2615
BstSLI	GKGCMC	3 cut(s)	989, 1160, 2648
BstSNI	TACGTA	1 cut(s)	1359
BstV1I	GCAGC	5 cut(s)	364, 1179, 1638, 1663, 1888
BstV2I	GAAGAC	4 cut(s)	683, 1119, 1121, 1999
BstX2I	RGATCY	6 cut(s)	855, 1632, 2089, 2150, 2296, 2401
BstYI	RGATCY	6 cut(s)	855, 1632, 2089, 2150, 2296, 2401
Bsu15I	ATCGAT	1 cut(s)	489
BsuI	GTATCC	1 cut(s)	1714
BsuRI	GGCC	3 cut(s)	608, 1051, 1565
BsuTUI	ATCGAT	1 cut(s)	489
BtgI	CCRYGG	1 cut(s)	2492
BtsCI	GGATG	2 cut(s)	1297, 1870
BtsIMutI	CAGTG	7 cut(s)	815, 1150, 1229, 1511, 1945, 2082, 2394
Cac8I	GCNNGC	6 cut(s)	758, 1263, 1382, 1853, 1860, 2020
CaiI	CAGNNNCTG	1 cut(s)	904
CciI	TCATGA	1 cut(s)	1963
CfoI	GCGC	1 cut(s)	35
Cfr13I	GGNCC	3 cut(s)	1049, 1420, 2488
ClaI	ATCGAT	1 cut(s)	489
CseI	GACGC	2 cut(s)	749, 2317
Csp6I	GTAC	3 cut(s)	701, 849, 2551
CviQI	GTAC	3 cut(s)	701, 849, 2551
DinI	GGCGCC	1 cut(s)	34
DrdI	GACNNNNNNGTC	1 cut(s)	1123
DseDI	GACNNNNNNGTC	1 cut(s)	1123
EaeI	YGGCCR	1 cut(s)	1563
Eam1104I	CTCTTC	2 cut(s)	621, 881
EarI	CTCTTC	2 cut(s)	621, 881
Ecl136II	GAGCTC	2 cut(s)	7, 1172
Eco105I	TACGTA	1 cut(s)	1359
Eco130I	CCWWGG	2 cut(s)	1725, 2492
Eco24I	GRGCYC	4 cut(s)	9, 616, 1174, 1372
Eco32I	GATATC	1 cut(s)	1732
Eco47I	GGWCC	2 cut(s)	1420, 2488
Eco53kI	GAGCTC	2 cut(s)	7, 1172
Eco57I	CTGAAG	3 cut(s)	1373, 1995, 2706
Eco88I	CYCGRG	2 cut(s)	2155, 2672
EcoICRI	GAGCTC	2 cut(s)	7, 1172
EcoNI	CCTNNNNNAGG	2 cut(s)	246, 1460
EcoRI	GAATTC	1 cut(s)	1249
EcoRII	CCWGG	4 cut(s)	608, 858, 903, 2043
EcoRV	GATATC	1 cut(s)	1732
EcoT14I	CCWWGG	2 cut(s)	1725, 2492
EcoT38I	GRGCYC	4 cut(s)	9, 616, 1174, 1372
EgeI	GGCGCC	1 cut(s)	34
EheI	GGCGCC	1 cut(s)	34
ErhI	CCWWGG	2 cut(s)	1725, 2492
Esp3I	CGTCTC	1 cut(s)	188
FalI	AAGNNNNNCTT	8 cut(s)	762, 794, 1326, 1358, 1709, 1741, 2006, 2038
FaqI	GGGAC	1 cut(s)	2061
FauI	CCCGC	1 cut(s)	1795
FauNDI	CATATG	1 cut(s)	1792
FbaI	TGATCA	3 cut(s)	331, 1486, 1867
FblI	GTMKAC	1 cut(s)	1355
Fnu4HI	GCNGC	7 cut(s)	353, 1193, 1378, 1652, 1677, 1856, 1902
FokI	GGATG	2 cut(s)	1304, 1857
FriOI	GRGCYC	4 cut(s)	9, 616, 1174, 1372
Fsp4HI	GCNGC	7 cut(s)	353, 1193, 1378, 1652, 1677, 1856, 1902
FspBI	CTAG	6 cut(s)	639, 653, 1314, 2196, 2633, 2661
GlaI	GCGC	1 cut(s)	34
GluI	GCNGC	7 cut(s)	353, 1193, 1378, 1652, 1677, 1856, 1902
HaeII	RGCGCY	1 cut(s)	36
HaeIII	GGCC	3 cut(s)	608, 1051, 1565
HapII	CCGG	4 cut(s)	30, 1279, 2439, 2539
HgaI	GACGC	2 cut(s)	749, 2317
HhaI	GCGC	1 cut(s)	35
Hin1I	GRCGYC	2 cut(s)	33, 2328
Hin6I	GCGC	1 cut(s)	33
HinP1I	GCGC	1 cut(s)	33
HincII	GTYRAC	1 cut(s)	2332
HindII	GTYRAC	1 cut(s)	2332
HindIII	AAGCTT	1 cut(s)	2211
HpaII	CCGG	4 cut(s)	30, 1279, 2439, 2539
HphI	GGTGA	3 cut(s)	182, 549, 2704
Hpy166II	GTNNAC	6 cut(s)	834, 1030, 1356, 2000, 2283, 2332
Hpy188III	TCNNGA	6 cut(s)	518, 1484, 1964, 2405, 2482, 2674
Hpy8I	GTNNAC	6 cut(s)	834, 1030, 1356, 2000, 2283, 2332
Hpy99I	CGWCG	1 cut(s)	1659
HpyCH4IV	ACGT	3 cut(s)	58, 1118, 1358
HpyF10VI	GCNNNNNNNGC	9 cut(s)	967, 1081, 1343, 1438, 1685, 1901, 2019, 2067, 2334
HpySE526I	ACGT	3 cut(s)	58, 1118, 1358
Hsp92I	GRCGYC	2 cut(s)	33, 2328
HspAI	GCGC	1 cut(s)	33
KasI	GGCGCC	1 cut(s)	32
Ksp22I	TGATCA	3 cut(s)	331, 1486, 1867
LmnI	GCTCC	7 cut(s)	4, 12, 238, 872, 1169, 2512, 2629
Lsp1109I	GCAGC	5 cut(s)	364, 1179, 1638, 1663, 1888
LweI	GCATC	4 cut(s)	511, 957, 1789, 2477
MaeI	CTAG	6 cut(s)	639, 653, 1314, 2196, 2633, 2661
MaeII	ACGT	3 cut(s)	58, 1118, 1358
MaeIII	GTNAC	5 cut(s)	555, 761, 1469, 1987, 2710
MbiI	CCGCTC	1 cut(s)	829
MfeI	CAATTG	1 cut(s)	2592
MflI	RGATCY	6 cut(s)	855, 1632, 2089, 2150, 2296, 2401
MhlI	GDGCHC	7 cut(s)	9, 616, 989, 1160, 1174, 1372, 2648
MlsI	TGGCCA	1 cut(s)	1565
MluNI	TGGCCA	1 cut(s)	1565
Mly113I	GGCGCC	1 cut(s)	33
MlyI	GAGTC	6 cut(s)	111, 563, 638, 1133, 1361, 1763
MmeI	TCCRAC	2 cut(s)	1381, 2329
Mox20I	TGGCCA	1 cut(s)	1565
MroXI	GAANNNNTTC	1 cut(s)	1705
MscI	TGGCCA	1 cut(s)	1565
MslI	CAYNNNNRTG	2 cut(s)	1504, 2360
Msp20I	TGGCCA	1 cut(s)	1565
MspA1I	CMGCKG	2 cut(s)	1973, 2507
MspI	CCGG	4 cut(s)	30, 1279, 2439, 2539
MspR9I	CCNGG	4 cut(s)	610, 860, 905, 2045
MunI	CAATTG	1 cut(s)	2592
MvaI	CCWGG	4 cut(s)	610, 860, 905, 2045
MwoI	GCNNNNNNNGC	9 cut(s)	967, 1081, 1343, 1438, 1685, 1901, 2019, 2067, 2334
NarI	GGCGCC	1 cut(s)	33
NcoI	CCATGG	1 cut(s)	2492
NdeI	CATATG	1 cut(s)	1792
NlaIV	GGNNCC	9 cut(s)	34, 240, 775, 874, 1277, 2254, 2403, 2490, 2647
NmuCI	GTSAC	4 cut(s)	555, 761, 1469, 2710
NspI	RCATGY	5 cut(s)	965, 1265, 2006, 2022, 2477
PaeI	GCATGC	2 cut(s)	1265, 2022
PaeR7I	CTCGAG	1 cut(s)	2155
PagI	TCATGA	1 cut(s)	1963
PasI	CCCWGGG	1 cut(s)	2044
PciI	ACATGT	2 cut(s)	2002, 2473
PdmI	GAANNNNTTC	1 cut(s)	1705
PfeI	GAWTC	8 cut(s)	137, 648, 1214, 2173, 2232, 2500, 2532, 2574
PflFI	GACNNNGTC	1 cut(s)	2362
PflMI	CCANNNNNTGG	1 cut(s)	995
PfoI	TCCNGGA	1 cut(s)	903
PkrI	GCNGC	7 cut(s)	354, 1194, 1379, 1653, 1678, 1857, 1903
PleI	GAGTC	6 cut(s)	110, 562, 637, 1132, 1360, 1762
PluTI	GGCGCC	1 cut(s)	36
PpsI	GAGTC	6 cut(s)	110, 562, 637, 1132, 1360, 1762
Ppu21I	YACGTR	1 cut(s)	1359
PscI	ACATGT	2 cut(s)	2002, 2473
Psp124BI	GAGCTC	2 cut(s)	9, 1174
Psp6I	CCWGG	4 cut(s)	608, 858, 903, 2043
PspGI	CCWGG	4 cut(s)	608, 858, 903, 2043
PspN4I	GGNNCC	9 cut(s)	34, 240, 775, 874, 1277, 2254, 2403, 2490, 2647
PspPI	GGNCC	3 cut(s)	1049, 1420, 2488
PspXI	VCTCGAGB	1 cut(s)	2155
PstI	CTGCAG	1 cut(s)	1478
PstNI	CAGNNNCTG	1 cut(s)	904
PsuI	RGATCY	6 cut(s)	855, 1632, 2089, 2150, 2296, 2401
PsyI	GACNNNGTC	1 cut(s)	2362
PvuII	CAGCTG	2 cut(s)	1973, 2507
RsaI	GTAC	3 cut(s)	702, 850, 2552
RsaNI	GTAC	3 cut(s)	701, 849, 2551
RseI	CAYNNNNRTG	2 cut(s)	1504, 2360
SacI	GAGCTC	2 cut(s)	9, 1174
SatI	GCNGC	7 cut(s)	353, 1193, 1378, 1652, 1677, 1856, 1902
Sau96I	GGNCC	3 cut(s)	1049, 1420, 2488
SchI	GAGTC	6 cut(s)	111, 563, 638, 1133, 1361, 1763
ScrFI	CCNGG	4 cut(s)	610, 860, 905, 2045
SduI	GDGCHC	7 cut(s)	9, 616, 989, 1160, 1174, 1372, 2648
SfaNI	GCATC	4 cut(s)	511, 957, 1789, 2477
SfcI	CTRYAG	3 cut(s)	750, 1474, 2615
SfoI	GGCGCC	1 cut(s)	34
Sfr274I	CTCGAG	1 cut(s)	2155
SinI	GGWCC	2 cut(s)	1420, 2488
SlaI	CTCGAG	1 cut(s)	2155
SmiMI	CAYNNNNRTG	2 cut(s)	1504, 2360
SmlI	CTYRAG	2 cut(s)	2155, 2180
SmoI	CTYRAG	2 cut(s)	2155, 2180
SnaBI	TACGTA	1 cut(s)	1359
SphI	GCATGC	2 cut(s)	1265, 2022
SsiI	CCGC	6 cut(s)	829, 1377, 1423, 1802, 1855, 2256
SspDI	GGCGCC	1 cut(s)	32
SspI	AATATT	1 cut(s)	1930
SspMI	CTAG	6 cut(s)	639, 653, 1314, 2196, 2633, 2661
SstI	GAGCTC	2 cut(s)	9, 1174
StyD4I	CCNGG	4 cut(s)	608, 858, 903, 2043
StyI	CCWWGG	2 cut(s)	1725, 2492
TaiI	ACGT	3 cut(s)	61, 1121, 1361
TaqI	TCGA	8 cut(s)	375, 381, 489, 519, 1187, 1699, 2072, 2156
TatI	WGTACW	3 cut(s)	700, 848, 2550
TauI	GCSGC	2 cut(s)	1380, 1858
TfiI	GAWTC	8 cut(s)	137, 648, 1214, 2173, 2232, 2500, 2532, 2574
TscAI	CASTG	7 cut(s)	815, 1150, 1236, 1511, 1945, 2089, 2401
TseFI	GTSAC	4 cut(s)	555, 761, 1469, 2710
TseI	GCWGC	5 cut(s)	352, 1192, 1651, 1676, 1901
Tsp45I	GTSAC	4 cut(s)	555, 761, 1469, 2710
TspRI	CASTG	7 cut(s)	815, 1150, 1236, 1511, 1945, 2089, 2401
Tth111I	GACNNNGTC	1 cut(s)	2362
Van91I	CCANNNNNTGG	1 cut(s)	995
VpaK11BI	GGWCC	2 cut(s)	1420, 2488
XagI	CCTNNNNNAGG	2 cut(s)	246, 1460
XapI	RAATTY	6 cut(s)	496, 1249, 2185, 2390, 2415, 2699
XceI	RCATGY	5 cut(s)	965, 1265, 2006, 2022, 2477
XcmI	CCANNNNNNNNNTGG	2 cut(s)	450, 901
XhoI	CTCGAG	1 cut(s)	2155
XmiI	GTMKAC	1 cut(s)	1355
XmnI	GAANNNNTTC	1 cut(s)	1705
XspI	CTAG	6 cut(s)	639, 653, 1314, 2196, 2633, 2661

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.