Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0004692

Physical Location & Seq

Genomic Coordinates Forward (+)

7145069 .. 7150974

Gene Structure 5906 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g09390.11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2952 bp

ATGATAAGGGATAAGATGGTAATTAAAAATTCAAATAATTCCAAGGGACGAAGGGTCTCTCGTGCCTCAATAAAAACCAGTAATCAGCACGCGTACTGTTGCTGCCAGAGGCGTGGCGCACACTTGGGAAGCCCCAGAGGCGCGACGTCGACGTGGATTCCCGCTGTTTCACTCGCCAGTCCCTGTCTATGTAAAGGGGCGCACTTTCCCGCCGCTCGCTTCCAGATAGTGCCCTTTTGTCTTCGACTCCGCCTCGTCCTCACTCAGTGCAAATACCTCGAAACTCGCGATCGCAGAACCCTAACTCGCTTTCTCCGTCAATGGAGCTTCGTTCTCGCAAGCGCACCGCCGGCCCTTCTTCCGATGGAAATGAGCAACACGAGGAAAAGGAAGATGCTTATTCACCGTCTGATGAGGATACTTATGTACCGTCTACGCCTTCCGCTTCTGATTTTGAGAGTGAAGAAGGTAGGTGAAGAGTACCAAAACAATGTGGAAGTTGTTTTTGACTTGAATGATAAGCCTAATGGTAAAATGAAGGAGCCTGCGATAAAAAAGTCGAAGGTGGTGGTGGTGGAGAACAAGACAGAAGCAGGAGGACCAAGCTCGATGGTGCCAGCAGCCAGGTTCACATCAGGTGAAATTGACGATCTTGGGTTGCACGACAAAAAAAAGAAAAAGAATCGTAAATCTGGGGTGCAAAAGCGGCGTTGGCAGTGGAATACCTGGGAAGAGGAGCATGATAAATGGCTTGATGACAACGTAACTGAAGATTTTGATCTGGATACTCAGAAGAATGTGATATGCGATGCTGCTGAGGCACCATCTGATATGATTATGCCTTTGCTAAGGTACCAGAAGGAATGGTTGTCATGGGCCATGAAACAGGAAGAGACTGAAACTAGAGGAGGAATCCTAGCAGATGAGATGGGAATGGGGAAGACTATTCAAGCCATTACTCTTGTCCTCGCTAAACGGGAATTTAATTCGACATGTTATGACACTGGTTCTTCCACAAGCTTTCCTAGAATCAAAACCACCCTTGTAGTTTGCCCTGTAGTTGCTGTGAGTCAATGGGTGAGTGAAATAGAGCGGTTTACTTCAAAAGGAAGTACAAAGGTTTTGGTTTATCATGGGGCTAATAGAGAGAAGAGTTCCCAAATTTTCTCAGGGTATGATTTTGTCATTACTACATACTCTATTGTTGAGGCTGACTACAGGAAGAATGTGATGCCTCCCAAACAAAAGTGTCAATATTGTGGAAGGTTGTATTACGAGAAGAAAATGTCAACTCACTTAAAATATTTTTGTGGGCCTAATGCTTTTAGAACTGAGAAGCAGTCTAAGCAACAAAGGAGAAAGCATCCACAACCAGTGTCGCAGAAGACAGTTGAGTCTAAAGGAAAGAATGGAGCTTCCAGGAAGAGCTCAGCACTGAACGAGGAAGATGATATGGATTCAGAAGATATTGGACAGCGCTTGAGCCTAGATAAGTCAGTTTTGCATTCTGTGAAGTGGAACCGTATCATTTTGGATGAGGCCCATTACATAAAATCAAGGCGTTGTAATACTGCGAAAGCAGTTCTTGCTTTAGAGTCTTCATACAAATGGGCTCTAAGTGGCACACCACTTCAGAACCGTGTTGGAGAACTTTATTCTTTGATCCGCTTCTTGCAGTTAGTCCCCTACTCGTATTACTTATGCAAGGATTGTGATTGCAGGACGCTCGATCATAGTTCCGCAGCACAATGTTCGAATTGCCCTCATAATTCAGTTAGACATTTTTGTTGGTGGAATAAATATGTGGCAACACCGATACAGATATATGGAAATCATATCCAAGGCAAAAGGGCCATGTATTTGCTAAAACACAAAATTCTAAAGAACATAGTCCTGCGACGAACTAAAAAGGGCAGGGCTGCTGATCTTGCACTACCTCCTAGAATTGTTTCATTGAGGCGGGACACCTTGGATATCACAGAACAAGGTTTTTATGAGTCAATATATAATGATACTCAGTCACAATTTAACGCATTTGTCGAAGAGGGAACTGTGATGAACAATTATGCTCACATATTTGACCTTCTCACTCGCTTGCGACAGGCTGTTAATCATCCTTACCTTGTGGTGTATTCTGCATCTGCTGCACTGAGAAATGGAAGCAACATTAATGTCAATGAGAAAATCTGTGGAATTTGTCATGAAGCAGCAGAAGATCTAGTGGTTACTGCTTGTGAGCATGCGTTTTGTAAGGCTTGCTTGCTTGATTTTGCTGCTTCTTTGGGACAAGTCTCATGCCCGACATGCTCTAAACCAGTTACTGTTGATTTCACTACAGCACCAGGTGCTACTATTCAGACTAAGACTACCATTAAGGGGTTTAGATCTTCGAGCATTTTGAACAGAATTAAGCTTGAAAATTTTCAGACTAGCACAAAAATTGAGGCTTTGAGGGAAGAAATCAGATCCATGGTTGAAAAGGATGGCTCTGCAAAAGGAATTGTTTTCAGCCAGTTCACATCGTTCTTGGATATCATTAACTACTCCTTGCAAAAGTCCGGTGTCAATTGTGTTCAGTTGGTGGGAAGCATGACTATGTCTGCAAGGGATAATGCTATAAAGAGATTTACCGAGGATCCAGATTGCAGGATTTTCTTAATGAGCTTGAAAGCTGGAGGTGTTGCTCTTAATCTGACAGTTGCATCGCATGTTTTCTTGATGGACCCATGGTGGAACCCAGCAGTTGAGAGGCAAGCACAAGATAGAATCCACCGGATAGGGCAGTACAAACCGATCAGAATTATGAGATTTGTGATTGAGAACACTATTGAGGACCGGATTCTAAAGCTACAGGAGAAAAAGGAATTAGTGTTCGAGGGGACCATCGGTGGTGCTTCAGACGCTCTTGCAAAATTAACAGAAGCCGACTTGAGATTCCTCTTTGTCACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000109 GO:0000166 GO:0000720 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004842 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006290 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009987 GO:0016043 GO:0016462 GO:0016567 GO:0016740 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019538 GO:0019787 GO:0030554 GO:0032392 GO:0032446 GO:0032508 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0033554 GO:0034641 GO:0035639 GO:0036094 GO:0036211 GO:0042623 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0050896 GO:0051276 GO:0051716 GO:0061630 GO:0061659 GO:0070035 GO:0070647 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097367 GO:0140096 GO:0140097 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1990391

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX

Protein Analysis

984

Amino Acids

111.82

Weight (kDa)

9.47

Isoelectric Point (pI)

45.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004692)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G02670 AT1G05120 AT1G05120
fragaria_vesca	FvH4_6g42970 FvH4_6g42970
malus_domestica	MD17G1098500.v1.1
prunus_persica	Prupe.3G215900_v2.0.a1 Prupe.3G215900_v2.0.a1
pyrus_communis	pycom09g03310 pycom17g09390
rosa_chinensis	RchiOBHm_Chr2g0158951
rosa_laevigata	RLG00000021126
rosa_multiflora	Rmu_sc0002845.1_g000016 Rmu_sc0007967.1_g000006 Rmu_sc0013139.1_g000001 Rmu_sc0030100.1_g000001
rosa_roxburghii	Rroxscaffold_1G00030500 Rroxscaffold_2G00090850
rosa_rugosa	Rorug02G0473200
rosa_samantha	Rh2AG539700 Rh2BG552600 Rh2CG523000 Rh2DG562300
rosa_wichuraiana	Rw2G044670 Rw7G039330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1393
AatII	GACGTC	1 cut(s)	149
Acc65I	GGTACC	1 cut(s)	852
AccB1I	GGYRCC	3 cut(s)	613, 820, 852
AccBSI	CCGCTC	2 cut(s)	215, 1093
AccI	GTMKAC	2 cut(s)	149, 433
AccII	CGCG	3 cut(s)	92, 143, 288
AclWI	GGATC	4 cut(s)	1657, 2460, 2630, 2643
AcsI	RAATTY	6 cut(s)	28, 980, 1161, 1875, 2193, 2419
AcuI	CTGAAG	3 cut(s)	789, 1616, 2880
AcyI	GRCGYC	1 cut(s)	146
AdeI	CACNNNGTG	2 cut(s)	267, 2345
AfaI	GTAC	6 cut(s)	95, 428, 482, 854, 1114, 2786
AfeI	AGCGCT	1 cut(s)	1478
AfiI	CCNNNNNNNGG	1 cut(s)	2376
AflIII	ACRYGT	2 cut(s)	90, 992
AgsI	TTSAA	8 cut(s)	33, 514, 950, 1104, 2401, 2417, 2477, 2668
AhdI	GACNNNNNGTC	1 cut(s)	53
AjiI	CACGTC	1 cut(s)	153
AjnI	CCWGG	4 cut(s)	623, 725, 1418, 2341
AloI	GAACNNNNNNTCC	2 cut(s)	2855, 2887
AluBI	AGCT	9 cut(s)	327, 606, 1020, 1415, 1428, 2413, 2664, 2672, 2848
AluI	AGCT	9 cut(s)	327, 606, 1020, 1415, 1428, 2413, 2664, 2672, 2848
Alw21I	GWGCWC	1 cut(s)	1430
Alw26I	GTCTC	3 cut(s)	61, 887, 2296
AlwI	GGATC	4 cut(s)	1657, 2460, 2630, 2643
AlwNI	CAGNNNCTG	2 cut(s)	183, 2321
Aor51HI	AGCGCT	1 cut(s)	1478
AoxI	GGCC	5 cut(s)	351, 876, 1313, 1539, 1851
ApeKI	GCWGC	8 cut(s)	102, 620, 812, 1742, 1919, 2144, 2207, 2273
ApoI	RAATTY	6 cut(s)	28, 980, 1161, 1875, 2193, 2419
AseI	ATTAAT	1 cut(s)	2169
AsiSI	GCGATCGC	1 cut(s)	292
Asp700I	GAANNNNTTC	2 cut(s)	1948, 2421
Asp718I	GGTACC	1 cut(s)	852
AspLEI	GCGC	5 cut(s)	119, 143, 202, 344, 1479
AspS9I	GGNCC	9 cut(s)	352, 599, 876, 1313, 1540, 1851, 2722, 2833, 2880
AsuHPI	GGTGA	5 cut(s)	395, 485, 650, 1090, 2938
AsuII	TTCGAA	1 cut(s)	1754
AvaII	GGWCC	4 cut(s)	599, 2722, 2833, 2880
BaeGI	GKGCMC	1 cut(s)	234
BaeI	ACNNNNGTAYC	4 cut(s)	410, 410, 443, 443
BamHI	GGATCC	1 cut(s)	2635
BanI	GGYRCC	3 cut(s)	613, 820, 852
BanII	GRGCYC	2 cut(s)	1430, 1615
BauI	CACGAG	2 cut(s)	60, 379
BbsI	GAAGAC	4 cut(s)	233, 947, 1391, 1590
Bbv12I	GWGCWC	1 cut(s)	1430
BbvCI	CCTCAGC	1 cut(s)	816
BbvI	GCAGC	8 cut(s)	89, 632, 799, 1754, 1906, 2131, 2219, 2260
BccI	CCATC	8 cut(s)	10, 358, 604, 832, 922, 2477, 2713, 2891
BcgI	CGANNNNNNTGC	6 cut(s)	259, 293, 1708, 1734, 1742, 1768
BciT130I	CCWGG	4 cut(s)	625, 727, 1420, 2343
BciVI	GTATCC	2 cut(s)	411, 778
BcoDI	GTCTC	3 cut(s)	61, 887, 2296
BfaI	CTAG	7 cut(s)	903, 917, 1026, 1487, 1941, 2219, 2430
BfmI	CTRYAG	4 cut(s)	1056, 1216, 2334, 2849
BfoI	RGCGCY	1 cut(s)	1480
BfuI	GTATCC	2 cut(s)	411, 778
BglI	GCCNNNNNGGC	1 cut(s)	138
BglII	AGATCT	2 cut(s)	2215, 2384
BlpI	GCTNAGC	1 cut(s)	1429
Bme1390I	CCNGG	4 cut(s)	625, 727, 1420, 2343
Bme18I	GGWCC	4 cut(s)	599, 2722, 2833, 2880
BmeRI	GACNNNNNGTC	1 cut(s)	53
BmgBI	CACGTC	1 cut(s)	153
BmgT120I	GGNCC	9 cut(s)	352, 599, 876, 1313, 1540, 1851, 2722, 2833, 2880
BmiI	GGNNCC	9 cut(s)	543, 615, 822, 854, 1520, 2637, 2724, 2735, 2881
BmrFI	CCNGG	4 cut(s)	625, 727, 1420, 2343
BmsI	GCATC	6 cut(s)	384, 799, 1221, 1372, 2147, 2711
BpiI	GAAGAC	4 cut(s)	233, 947, 1391, 1590
BpmI	CTGGAG	1 cut(s)	2694
Bpu10I	CCTNAGC	2 cut(s)	816, 848
Bpu1102I	GCTNAGC	1 cut(s)	1429
Bpu14I	TTCGAA	1 cut(s)	1754
BpuEI	CTTGAG	2 cut(s)	1501, 2950
BsaBI	GATNNNNATC	1 cut(s)	777
BsaHI	GRCGYC	1 cut(s)	146
BsaI	GGTCTC	1 cut(s)	61
BsaJI	CCNNGG	7 cut(s)	42, 726, 1840, 1968, 2469, 2631, 2726
BsaWI	WCCGGW	3 cut(s)	2558, 2772, 2835
Bsc4I	CCNNNNNNNGG	1 cut(s)	2376
Bse118I	RCCGGY	1 cut(s)	349
Bse1I	ACTGG	6 cut(s)	78, 177, 1009, 1373, 2315, 2512
Bse8I	GATNNNNATC	1 cut(s)	777
BseBI	CCWGG	4 cut(s)	625, 727, 1420, 2343
BseDI	CCNNGG	7 cut(s)	42, 726, 1840, 1968, 2469, 2631, 2726
BseGI	GGATG	4 cut(s)	1363, 1540, 2113, 2488
BseJI	GATNNNNATC	1 cut(s)	777
BseLI	CCNNNNNNNGG	1 cut(s)	2376
BseMII	CTCAG	8 cut(s)	278, 803, 807, 1182, 1323, 1443, 2030, 2141
BseNI	ACTGG	6 cut(s)	78, 177, 1009, 1373, 2315, 2512
BseRI	GAGGAG	2 cut(s)	749, 921
BseSI	GKGCMC	1 cut(s)	234
BseXI	GCAGC	8 cut(s)	89, 632, 799, 1754, 1906, 2131, 2219, 2260
BseYI	CCCAGC	1 cut(s)	2737
BsgI	GTGCAG	1 cut(s)	2130
Bsh1236I	CGCG	3 cut(s)	92, 143, 288
Bsh1285I	CGRYCG	1 cut(s)	292
BshFI	GGCC	5 cut(s)	353, 878, 1315, 1541, 1853
BshNI	GGYRCC	3 cut(s)	613, 820, 852
BsiEI	CGRYCG	1 cut(s)	292
BsiHKAI	GWGCWC	1 cut(s)	1430
BsiSI	CCGG	4 cut(s)	350, 2559, 2773, 2836
BslFI	GGGAC	6 cut(s)	60, 165, 1667, 1976, 2298, 2893
BslI	CCNNNNNNNGG	1 cut(s)	2376
BsmAI	GTCTC	3 cut(s)	61, 887, 2296
BsmFI	GGGAC	6 cut(s)	60, 165, 1667, 1976, 2298, 2893
BsmI	GAATGC	1 cut(s)	1504
BsnI	GGCC	5 cut(s)	353, 878, 1315, 1541, 1853
Bso31I	GGTCTC	1 cut(s)	61
Bsp119I	TTCGAA	1 cut(s)	1754
Bsp1286I	GDGCHC	3 cut(s)	234, 1430, 1615
Bsp1720I	GCTNAGC	1 cut(s)	1429
Bsp19I	CCATGG	2 cut(s)	2469, 2726
Bsp68I	TCGCGA	1 cut(s)	288
BspANI	GGCC	5 cut(s)	353, 878, 1315, 1541, 1853
BspCNI	CTCAG	8 cut(s)	277, 802, 808, 1181, 1324, 1442, 2029, 2142
BspFNI	CGCG	3 cut(s)	92, 143, 288
BspHI	TCATGA	1 cut(s)	2200
BspLI	GGNNCC	9 cut(s)	543, 615, 822, 854, 1520, 2637, 2724, 2735, 2881
BspPI	GGATC	4 cut(s)	1657, 2460, 2630, 2643
BspQI	GCTCTTC	1 cut(s)	1418
BspT104I	TTCGAA	1 cut(s)	1754
BspT107I	GGYRCC	3 cut(s)	613, 820, 852
BspTNI	GGTCTC	1 cut(s)	61
BsrBI	CCGCTC	2 cut(s)	215, 1093
BsrFI	RCCGGY	1 cut(s)	349
BsrI	ACTGG	6 cut(s)	78, 177, 1009, 1373, 2315, 2512
BssAI	RCCGGY	1 cut(s)	349
BssECI	CCNNGG	7 cut(s)	42, 726, 1840, 1968, 2469, 2631, 2726
BssNI	GRCGYC	1 cut(s)	146
BssSI	CACGAG	2 cut(s)	60, 379
BssT1I	CCWWGG	5 cut(s)	42, 1840, 1968, 2469, 2726
Bst2BI	CACGAG	2 cut(s)	60, 379
Bst2UI	CCWGG	4 cut(s)	625, 727, 1420, 2343
Bst4CI	ACNGT	9 cut(s)	98, 407, 431, 1390, 1523, 1640, 2053, 2323, 2698
Bst6I	CTCTTC	6 cut(s)	471, 726, 885, 1145, 1418, 2037
BstACI	GRCGYC	1 cut(s)	146
BstAPI	GCANNNNNTGC	3 cut(s)	1586, 2144, 2345
BstBI	TTCGAA	1 cut(s)	1754
BstDSI	CCRYGG	2 cut(s)	2469, 2726
BstF5I	GGATG	4 cut(s)	1363, 1540, 2113, 2488
BstFNI	CGCG	3 cut(s)	92, 143, 288
BstH2I	RGCGCY	1 cut(s)	1480
BstHHI	GCGC	5 cut(s)	119, 143, 202, 344, 1479
BstMAI	GTCTC	3 cut(s)	61, 887, 2296
BstMCI	CGRYCG	1 cut(s)	292
BstNI	CCWGG	4 cut(s)	625, 727, 1420, 2343
BstNSI	RCATGY	4 cut(s)	996, 2243, 2307, 2711
BstSCI	CCNGG	4 cut(s)	623, 725, 1418, 2341
BstSFI	CTRYAG	4 cut(s)	1056, 1216, 2334, 2849
BstSLI	GKGCMC	1 cut(s)	234
BstUI	CGCG	3 cut(s)	92, 143, 288
BstV1I	GCAGC	8 cut(s)	89, 632, 799, 1754, 1906, 2131, 2219, 2260
BstV2I	GAAGAC	4 cut(s)	233, 947, 1391, 1590
BstX2I	RGATCY	4 cut(s)	2215, 2384, 2465, 2635
BstXI	CCANNNNNNTGG	1 cut(s)	113
BstYI	RGATCY	4 cut(s)	2215, 2384, 2465, 2635
BsuI	GTATCC	2 cut(s)	411, 778
BsuRI	GGCC	5 cut(s)	353, 878, 1315, 1541, 1853
BtgI	CCRYGG	2 cut(s)	2469, 2726
BtgZI	GCGATG	2 cut(s)	822, 2688
BtrI	CACGTC	1 cut(s)	153
BtsCI	GGATG	4 cut(s)	1363, 1540, 2113, 2488
BtsI	GCAGTG	1 cut(s)	722
BtsIMutI	CAGTG	6 cut(s)	272, 722, 1002, 1380, 1433, 2147
BtuMI	TCGCGA	1 cut(s)	288
CaiI	CAGNNNCTG	2 cut(s)	183, 2321
CciI	TCATGA	1 cut(s)	2200
CfoI	GCGC	5 cut(s)	119, 143, 202, 344, 1479
Cfr10I	RCCGGY	1 cut(s)	349
Cfr13I	GGNCC	9 cut(s)	352, 599, 876, 1313, 1540, 1851, 2722, 2833, 2880
CseI	GACGC	2 cut(s)	1732, 2909
CsiI	ACCWGGT	1 cut(s)	2341
Csp6I	GTAC	6 cut(s)	94, 427, 481, 853, 1113, 2785
CviQI	GTAC	6 cut(s)	94, 427, 481, 853, 1113, 2785
DraIII	CACNNNGTG	2 cut(s)	267, 2345
DrdI	GACNNNNNNGTC	1 cut(s)	1393
DriI	GACNNNNNGTC	1 cut(s)	53
DseDI	GACNNNNNNGTC	1 cut(s)	1393
Eam1104I	CTCTTC	6 cut(s)	471, 726, 885, 1145, 1418, 2037
Eam1105I	GACNNNNNGTC	1 cut(s)	53
EarI	CTCTTC	6 cut(s)	471, 726, 885, 1145, 1418, 2037
EciI	GGCGGA	1 cut(s)	239
Ecl136II	GAGCTC	1 cut(s)	1428
Eco130I	CCWWGG	5 cut(s)	42, 1840, 1968, 2469, 2726
Eco24I	GRGCYC	2 cut(s)	1430, 1615
Eco31I	GGTCTC	1 cut(s)	61
Eco32I	GATATC	2 cut(s)	1975, 2533
Eco47I	GGWCC	4 cut(s)	599, 2722, 2833, 2880
Eco47III	AGCGCT	1 cut(s)	1478
Eco53kI	GAGCTC	1 cut(s)	1428
Eco57I	CTGAAG	3 cut(s)	789, 1616, 2880
EcoICRI	GAGCTC	1 cut(s)	1428
EcoRII	CCWGG	4 cut(s)	623, 725, 1418, 2341
EcoRV	GATATC	2 cut(s)	1975, 2533
EcoT14I	CCWWGG	5 cut(s)	42, 1840, 1968, 2469, 2726
EcoT38I	GRGCYC	2 cut(s)	1430, 1615
ErhI	CCWWGG	5 cut(s)	42, 1840, 1968, 2469, 2726
FalI	AAGNNNNNCTT	4 cut(s)	1569, 1601, 2243, 2275
FaqI	GGGAC	6 cut(s)	60, 165, 1667, 1976, 2298, 2893
FauI	CCCGC	3 cut(s)	169, 217, 1953
FblI	GTMKAC	2 cut(s)	149, 433
FokI	GGATG	4 cut(s)	1350, 1547, 2100, 2495
FriOI	GRGCYC	2 cut(s)	1430, 1615
FspBI	CTAG	7 cut(s)	903, 917, 1026, 1487, 1941, 2219, 2430
GlaI	GCGC	5 cut(s)	118, 142, 201, 343, 1478
GsaI	CCCAGC	1 cut(s)	2741
GsuI	CTGGAG	1 cut(s)	2694
HaeII	RGCGCY	1 cut(s)	1480
HaeIII	GGCC	5 cut(s)	353, 878, 1315, 1541, 1853
HapII	CCGG	4 cut(s)	350, 2559, 2773, 2836
HgaI	GACGC	2 cut(s)	1732, 2909
HhaI	GCGC	5 cut(s)	119, 143, 202, 344, 1479
Hin1I	GRCGYC	1 cut(s)	146
Hin6I	GCGC	5 cut(s)	117, 141, 200, 342, 1477
HinP1I	GCGC	5 cut(s)	117, 141, 200, 342, 1477
HincII	GTYRAC	2 cut(s)	150, 1290
HindII	GTYRAC	2 cut(s)	150, 1290
HindIII	AAGCTT	2 cut(s)	1018, 2411
HpaII	CCGG	4 cut(s)	350, 2559, 2773, 2836
HphI	GGTGA	5 cut(s)	395, 485, 650, 1090, 2938
Hpy166II	GTNNAC	6 cut(s)	150, 434, 630, 1098, 1290, 2517
Hpy188III	TCNNGA	6 cut(s)	223, 287, 782, 2201, 2639, 2716
Hpy8I	GTNNAC	6 cut(s)	150, 434, 630, 1098, 1290, 2517
Hpy99I	CGWCG	4 cut(s)	148, 151, 154, 1902
HpyAV	CCTTC	9 cut(s)	45, 365, 449, 460, 532, 556, 853, 1257, 2093
HpyCH4III	ACNGT	9 cut(s)	98, 407, 431, 1390, 1523, 1640, 2053, 2323, 2698
HpyCH4IV	ACGT	3 cut(s)	146, 152, 762
HpySE526I	ACGT	3 cut(s)	146, 152, 762
Hsp92I	GRCGYC	1 cut(s)	146
HspAI	GCGC	5 cut(s)	117, 141, 200, 342, 1477
KpnI	GGTACC	1 cut(s)	856
KroI	GCCGGC	1 cut(s)	349
KroNI	GCCGGC	1 cut(s)	351
LguI	GCTCTTC	1 cut(s)	1418
LmnI	GCTCC	4 cut(s)	324, 541, 736, 1412
Lsp1109I	GCAGC	8 cut(s)	89, 632, 799, 1754, 1906, 2131, 2219, 2260
LweI	GCATC	6 cut(s)	384, 799, 1221, 1372, 2147, 2711
MabI	ACCWGGT	1 cut(s)	2341
MaeI	CTAG	7 cut(s)	903, 917, 1026, 1487, 1941, 2219, 2430
MaeII	ACGT	3 cut(s)	146, 152, 762
MaeIII	GTNAC	5 cut(s)	763, 2019, 2224, 2317, 2944
MbiI	CCGCTC	2 cut(s)	215, 1093
MfeI	CAATTG	1 cut(s)	2566
MflI	RGATCY	4 cut(s)	2215, 2384, 2465, 2635
MhlI	GDGCHC	3 cut(s)	234, 1430, 1615
MluI	ACGCGT	1 cut(s)	90
MlyI	GAGTC	5 cut(s)	240, 1078, 1403, 1604, 2006
MmeI	TCCRAC	1 cut(s)	1624
MroNI	GCCGGC	1 cut(s)	349
MroXI	GAANNNNTTC	2 cut(s)	1948, 2421
MslI	CAYNNNNRTG	2 cut(s)	1606, 2594
MspA1I	CMGCKG	1 cut(s)	164
MspI	CCGG	4 cut(s)	350, 2559, 2773, 2836
MspR9I	CCNGG	4 cut(s)	625, 727, 1420, 2343
MunI	CAATTG	1 cut(s)	2566
Mva1269I	GAATGC	1 cut(s)	1504
MvaI	CCWGG	4 cut(s)	625, 727, 1420, 2343
MvnI	CGCG	3 cut(s)	92, 143, 288
NaeI	GCCGGC	1 cut(s)	351
NcoI	CCATGG	2 cut(s)	2469, 2726
NgoMIV	GCCGGC	1 cut(s)	349
NlaIV	GGNNCC	9 cut(s)	543, 615, 822, 854, 1520, 2637, 2724, 2735, 2881
NmuCI	GTSAC	2 cut(s)	2019, 2944
NruI	TCGCGA	1 cut(s)	288
NspI	RCATGY	4 cut(s)	996, 2243, 2307, 2711
NspV	TTCGAA	1 cut(s)	1754
PaeI	GCATGC	1 cut(s)	2243
PagI	TCATGA	1 cut(s)	2200
PciI	ACATGT	1 cut(s)	992
PciSI	GCTCTTC	1 cut(s)	1418
PcsI	WCGNNNNNNNCGW	3 cut(s)	285, 313, 2037
PctI	GAATGC	1 cut(s)	1504
PdiI	GCCGGC	1 cut(s)	351
PdmI	GAANNNNTTC	2 cut(s)	1948, 2421
PfeI	GAWTC	8 cut(s)	157, 682, 912, 1029, 1457, 2766, 2839, 2934
PflFI	GACNNNGTC	1 cut(s)	2596
PfoI	TCCNGGA	1 cut(s)	1418
Ple19I	CGATCG	1 cut(s)	292
PleI	GAGTC	5 cut(s)	240, 1077, 1402, 1603, 2005
PpsI	GAGTC	5 cut(s)	240, 1077, 1402, 1603, 2005
PscI	ACATGT	1 cut(s)	992
PshBI	ATTAAT	1 cut(s)	2169
Psp124BI	GAGCTC	1 cut(s)	1430
Psp6I	CCWGG	4 cut(s)	623, 725, 1418, 2341
PspFI	CCCAGC	1 cut(s)	2737
PspGI	CCWGG	4 cut(s)	623, 725, 1418, 2341
PspN4I	GGNNCC	9 cut(s)	543, 615, 822, 854, 1520, 2637, 2724, 2735, 2881
PspPI	GGNCC	9 cut(s)	352, 599, 876, 1313, 1540, 1851, 2722, 2833, 2880
PstNI	CAGNNNCTG	2 cut(s)	183, 2321
PsuI	RGATCY	4 cut(s)	2215, 2384, 2465, 2635
PsyI	GACNNNGTC	1 cut(s)	2596
PvuI	CGATCG	1 cut(s)	292
RgaI	GCGATCGC	1 cut(s)	292
RruI	TCGCGA	1 cut(s)	288
RsaI	GTAC	6 cut(s)	95, 428, 482, 854, 1114, 2786
RsaNI	GTAC	6 cut(s)	94, 427, 481, 853, 1113, 2785
RseI	CAYNNNNRTG	2 cut(s)	1606, 2594
SacI	GAGCTC	1 cut(s)	1430
SalI	GTCGAC	1 cut(s)	148
SapI	GCTCTTC	1 cut(s)	1418
Sau96I	GGNCC	9 cut(s)	352, 599, 876, 1313, 1540, 1851, 2722, 2833, 2880
SchI	GAGTC	5 cut(s)	240, 1078, 1403, 1604, 2006
ScrFI	CCNGG	4 cut(s)	625, 727, 1420, 2343
SduI	GDGCHC	3 cut(s)	234, 1430, 1615
SexAI	ACCWGGT	1 cut(s)	2341
SfaAI	GCGATCGC	1 cut(s)	292
SfaNI	GCATC	6 cut(s)	384, 799, 1221, 1372, 2147, 2711
SfcI	CTRYAG	4 cut(s)	1056, 1216, 2334, 2849
SfuI	TTCGAA	1 cut(s)	1754
SgfI	GCGATCGC	1 cut(s)	292
SgrDI	CGTCGACG	1 cut(s)	148
SinI	GGWCC	4 cut(s)	599, 2722, 2833, 2880
SmiMI	CAYNNNNRTG	2 cut(s)	1606, 2594
SmlI	CTYRAG	2 cut(s)	1480, 2929
SmoI	CTYRAG	2 cut(s)	1480, 2929
SphI	GCATGC	1 cut(s)	2243
SspI	AATATT	2 cut(s)	1256, 1304
SspMI	CTAG	7 cut(s)	903, 917, 1026, 1487, 1941, 2219, 2430
SstI	GAGCTC	1 cut(s)	1430
StyD4I	CCNGG	4 cut(s)	623, 725, 1418, 2341
StyI	CCWWGG	5 cut(s)	42, 1840, 1968, 2469, 2726
TaaI	ACNGT	9 cut(s)	98, 407, 431, 1390, 1523, 1640, 2053, 2323, 2698
TaiI	ACGT	3 cut(s)	149, 155, 765
TatI	WGTACW	2 cut(s)	1112, 2784
TauI	GCSGC	2 cut(s)	215, 709
TfiI	GAWTC	8 cut(s)	157, 682, 912, 1029, 1457, 2766, 2839, 2934
TscAI	CASTG	6 cut(s)	272, 722, 1009, 1380, 1440, 2154
TseFI	GTSAC	2 cut(s)	2019, 2944
TseI	GCWGC	8 cut(s)	102, 620, 812, 1742, 1919, 2144, 2207, 2273
Tsp45I	GTSAC	2 cut(s)	2019, 2944
TspDTI	ATGAA	6 cut(s)	551, 896, 1590, 1941, 2072, 2217
TspGWI	ACGGA	1 cut(s)	305
TspRI	CASTG	6 cut(s)	272, 722, 1009, 1380, 1440, 2154
Tth111I	GACNNNGTC	1 cut(s)	2596
VpaK11BI	GGWCC	4 cut(s)	599, 2722, 2833, 2880
VspI	ATTAAT	1 cut(s)	2169
XapI	RAATTY	6 cut(s)	28, 980, 1161, 1875, 2193, 2419
XceI	RCATGY	4 cut(s)	996, 2243, 2307, 2711
XmiI	GTMKAC	2 cut(s)	149, 433
XmnI	GAANNNNTTC	2 cut(s)	1948, 2421
XspI	CTAG	7 cut(s)	903, 917, 1026, 1487, 1941, 2219, 2430
ZraI	GACGTC	1 cut(s)	147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.