Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008637

Physical Location & Seq

Genomic Coordinates Reverse (-)

4837927 .. 4839633

Gene Structure 1707 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G14140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 918 bp

ATGGAGCGGAGCCGAGTGACCAGAGAAGCACCGACCGGAACCAGGATCCTGCTTGCTTCACTCTCTGCGATGGTTGCAGAGTCAGTTACGTTTCCGATTGATCTCACAAAGACTAGAATGCAGCTCCATGGTTCGGGATCCGCTTCTGGTGCGCATCGGATTGGCGCTTTCGGAGTCGTATCGGAGATTGCGAGAAAGGAAGGAGTGATTGGTCTCTACAAAGGTCTATCTCCGGCGATTATCAGACACCTGTTCTACACGCCTATCAGAATCATTGGATACGAGAATTTGAAAGGACTCATCGTCAGATCTGAAACTAACAATAGCGAGTCTCTTCCTCTCGCCACAAAGGCTCTCGTCGGAGGATTTTCTGGTGTTATAGCTCAGGTAGTGGCTAGTCCAGCTGATTTGGTCAAAGTGAGAATGCAAGCAGATGGTAGATTGGTGAGCCAAGGCCTGAAACCGAGGTACTCGGGACCAATCGAGGCTTTTACCAAAATCCTACAATCAGAAGGAGTAAAAGGGTTATGGAAAGGTGTTCTTCCAAACATCCAGAGAGCATTTCTAGTGAATATGGGAGAACTAGCTTGCTATGATCACGCCAAACACTTTGTCATCGATAAGAAGATTGCTGAGGATAACATTTTTGCGCACACTCTTGCTTCTATAATGTCGGGTCTTGCTTCGACAAGTTTGAGTTGTCCAGCTGATGTGGTGAAGACGAGGATGATGAACCAGGGTGAAAATGCTGTGTACAGAAATTCTTACGACTGTTTGGTGAAGACGGTTAAGTTTGAAGGAATAAGAGCTTTGTGGAAAGGTTTCTTCCCGACATGGGCAAGGCTTGGACCGTGGCAGTTCGTGTTTTGGGTCTCCTATGAGAAGTTTAGACTGCTGGCAGGAATCTCTTCCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006839 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0042391 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051881 GO:0055085 GO:0065007 GO:0065008

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

305

Amino Acids

33.44

Weight (kDa)

9.82

Isoelectric Point (pI)

32.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	11 - 103	2.2e-20	Mitochondrial carrier protein
Mito_carr	PF00153	112 - 208	1e-23	Mitochondrial carrier protein
Mito_carr	PF00153	213 - 298	8.8e-23	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008637)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14140
fragaria_vesca	FvH4_4g31010 FvH4_4g31020
malus_domestica	MD13G1068800.v1.1 MD13G1255700.v1.1 MD16G1069100.v1.1
prunus_persica	Prupe.1G278100_v2.0.a1
pyrus_communis	pycom13g06160
rosa_chinensis	RchiOBHm_Chr4g0439381 RchiOBHm_Chr7g0223901
rosa_laevigata	RLG00000001923 RLG00000006275
rosa_multiflora	Rmu_co8146616.1_g000001 Rmu_sc0002469.1_g000001 Rmu_sc0004540.1_g000015
rosa_roxburghii	Rroxscaffold_3G00235200 Rroxscaffold_5G00380320
rosa_rugosa	Rorug07G0221100
rosa_samantha	Rh4DG375600 Rh7AG363700 Rh7CG382500 Rh7DG358400
rosa_wichuraiana	Rw7G030870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	153, 651
AccBSI	CCGCTC	1 cut(s)	7
AciI	CCGC	2 cut(s)	7, 141
AclWI	GGATC	4 cut(s)	40, 53, 132, 145
AcsI	RAATTY	2 cut(s)	286, 760
AfaI	GTAC	2 cut(s)	470, 755
AfiI	CCNNNNNNNGG	3 cut(s)	42, 133, 835
AgsI	TTSAA	2 cut(s)	292, 797
AhdI	GACNNNNNGTC	1 cut(s)	302
AjnI	CCWGG	2 cut(s)	41, 735
AjuI	GAANNNNNNNTTGG	2 cut(s)	192, 224
AluBI	AGCT	6 cut(s)	124, 383, 404, 587, 707, 809
AluI	AGCT	6 cut(s)	124, 383, 404, 587, 707, 809
Alw26I	GTCTC	3 cut(s)	218, 336, 877
AlwI	GGATC	4 cut(s)	40, 53, 132, 145
Ama87I	CYCGRG	1 cut(s)	472
AoxI	GGCC	1 cut(s)	454
ApeKI	GCWGC	1 cut(s)	121
ApoI	RAATTY	2 cut(s)	286, 760
ArsI	GACNNNNNNTTYG	2 cut(s)	597, 629
Asp700I	GAANNNNTTC	2 cut(s)	821, 907
AspLEI	GCGC	3 cut(s)	154, 167, 652
AspS9I	GGNCC	2 cut(s)	476, 848
AsuHPI	GGTGA	4 cut(s)	457, 727, 752, 790
AvaI	CYCGRG	1 cut(s)	472
AvaII	GGWCC	2 cut(s)	476, 848
BamHI	GGATCC	2 cut(s)	45, 137
BbsI	GAAGAC	2 cut(s)	725, 788
BbvCI	CCTCAGC	1 cut(s)	633
BbvI	GCAGC	1 cut(s)	133
BccI	CCATC	2 cut(s)	64, 428
BciT130I	CCWGG	2 cut(s)	43, 737
BciVI	GTATCC	1 cut(s)	272
BclI	TGATCA	1 cut(s)	595
BcoDI	GTCTC	3 cut(s)	218, 336, 877
BfaI	CTAG	5 cut(s)	114, 396, 566, 584, 916
BfoI	RGCGCY	1 cut(s)	168
BfuI	GTATCC	1 cut(s)	272
BglI	GCCNNNNNGGC	1 cut(s)	350
BglII	AGATCT	1 cut(s)	308
BisI	GCNGC	1 cut(s)	122
BlsI	GCNGC	1 cut(s)	123
Bme1390I	CCNGG	2 cut(s)	43, 737
Bme18I	GGWCC	2 cut(s)	476, 848
BmeRI	GACNNNNNGTC	1 cut(s)	302
BmeT110I	CYCGRG	1 cut(s)	472
BmgT120I	GGNCC	2 cut(s)	476, 848
BmiI	GGNNCC	5 cut(s)	11, 40, 47, 139, 477
BmrFI	CCNGG	2 cut(s)	43, 737
BmsI	GCATC	1 cut(s)	163
BpiI	GAAGAC	2 cut(s)	725, 788
Bpu10I	CCTNAGC	2 cut(s)	384, 633
Bsa29I	ATCGAT	1 cut(s)	618
BsaI	GGTCTC	2 cut(s)	218, 877
BsaJI	CCNNGG	5 cut(s)	127, 451, 464, 736, 851
BsaWI	WCCGGW	1 cut(s)	35
Bsc4I	CCNNNNNNNGG	3 cut(s)	42, 133, 835
BseBI	CCWGG	2 cut(s)	43, 737
BseCI	ATCGAT	1 cut(s)	618
BseDI	CCNNGG	5 cut(s)	127, 451, 464, 736, 851
BseGI	GGATG	2 cut(s)	549, 732
BseLI	CCNNNNNNNGG	3 cut(s)	42, 133, 835
BseMII	CTCAG	2 cut(s)	398, 624
BseXI	GCAGC	1 cut(s)	133
Bsh1285I	CGRYCG	1 cut(s)	36
BshFI	GGCC	1 cut(s)	456
BshVI	ATCGAT	1 cut(s)	618
BsiEI	CGRYCG	1 cut(s)	36
BsiHKCI	CYCGRG	1 cut(s)	472
BsiSI	CCGG	2 cut(s)	36, 233
BslFI	GGGAC	1 cut(s)	489
BslI	CCNNNNNNNGG	3 cut(s)	42, 133, 835
BsmAI	GTCTC	3 cut(s)	218, 336, 877
BsmFI	GGGAC	1 cut(s)	489
BsmI	GAATGC	2 cut(s)	123, 429
BsnI	GGCC	1 cut(s)	456
Bso31I	GGTCTC	2 cut(s)	218, 877
BsoBI	CYCGRG	1 cut(s)	472
Bsp1407I	TGTACA	1 cut(s)	753
Bsp143I	GATC	5 cut(s)	45, 100, 137, 308, 595
Bsp19I	CCATGG	1 cut(s)	127
BspACI	CCGC	2 cut(s)	7, 141
BspANI	GGCC	1 cut(s)	456
BspCNI	CTCAG	2 cut(s)	397, 625
BspDI	ATCGAT	1 cut(s)	618
BspLI	GGNNCC	5 cut(s)	11, 40, 47, 139, 477
BspPI	GGATC	4 cut(s)	40, 53, 132, 145
BspTNI	GGTCTC	2 cut(s)	218, 877
BsrBI	CCGCTC	1 cut(s)	7
BsrGI	TGTACA	1 cut(s)	753
BssECI	CCNNGG	5 cut(s)	127, 451, 464, 736, 851
BssMI	GATC	5 cut(s)	45, 100, 137, 308, 595
BssT1I	CCWWGG	2 cut(s)	127, 451
Bst2UI	CCWGG	2 cut(s)	43, 737
Bst4CI	ACNGT	3 cut(s)	773, 787, 852
Bst6I	CTCTTC	2 cut(s)	339, 913
BstAUI	TGTACA	1 cut(s)	753
BstC8I	GCNNGC	4 cut(s)	54, 429, 589, 897
BstDEI	CTNAG	2 cut(s)	384, 633
BstDSI	CCRYGG	2 cut(s)	127, 851
BstF5I	GGATG	2 cut(s)	549, 732
BstH2I	RGCGCY	1 cut(s)	168
BstHHI	GCGC	3 cut(s)	154, 167, 652
BstKTI	GATC	5 cut(s)	48, 103, 140, 311, 598
BstMAI	GTCTC	3 cut(s)	218, 336, 877
BstMBI	GATC	5 cut(s)	45, 100, 137, 308, 595
BstMCI	CGRYCG	1 cut(s)	36
BstMWI	GCNNNNNNNGC	4 cut(s)	74, 149, 350, 401
BstNI	CCWGG	2 cut(s)	43, 737
BstSCI	CCNGG	2 cut(s)	41, 735
BstV1I	GCAGC	1 cut(s)	133
BstV2I	GAAGAC	2 cut(s)	725, 788
BstX2I	RGATCY	3 cut(s)	45, 137, 308
BstYI	RGATCY	3 cut(s)	45, 137, 308
Bsu15I	ATCGAT	1 cut(s)	618
BsuI	GTATCC	1 cut(s)	272
BsuRI	GGCC	1 cut(s)	456
BsuTUI	ATCGAT	1 cut(s)	618
BtgI	CCRYGG	2 cut(s)	127, 851
BtgZI	GCGATG	1 cut(s)	83
BtsCI	GGATG	2 cut(s)	549, 732
Cac8I	GCNNGC	4 cut(s)	54, 429, 589, 897
CfoI	GCGC	3 cut(s)	154, 167, 652
Cfr13I	GGNCC	2 cut(s)	476, 848
ClaI	ATCGAT	1 cut(s)	618
Csp6I	GTAC	2 cut(s)	469, 754
CviAII	CATG	2 cut(s)	128, 834
CviQI	GTAC	2 cut(s)	469, 754
DdeI	CTNAG	2 cut(s)	384, 633
DpnI	GATC	5 cut(s)	47, 102, 139, 310, 597
DpnII	GATC	5 cut(s)	45, 100, 137, 308, 595
DriI	GACNNNNNGTC	1 cut(s)	302
Eam1104I	CTCTTC	2 cut(s)	339, 913
Eam1105I	GACNNNNNGTC	1 cut(s)	302
EarI	CTCTTC	2 cut(s)	339, 913
Eco130I	CCWWGG	2 cut(s)	127, 451
Eco147I	AGGCCT	1 cut(s)	456
Eco31I	GGTCTC	2 cut(s)	218, 877
Eco47I	GGWCC	2 cut(s)	476, 848
Eco88I	CYCGRG	1 cut(s)	472
EcoRII	CCWGG	2 cut(s)	41, 735
EcoT14I	CCWWGG	2 cut(s)	127, 451
ErhI	CCWWGG	2 cut(s)	127, 451
FaeI	CATG	2 cut(s)	131, 837
FaiI	YATR	8 cut(s)	129, 380, 529, 575, 594, 668, 835, 879
FalI	AAGNNNNNCTT	2 cut(s)	525, 557
FaqI	GGGAC	1 cut(s)	489
FatI	CATG	2 cut(s)	127, 833
FbaI	TGATCA	1 cut(s)	595
Fnu4HI	GCNGC	1 cut(s)	122
FokI	GGATG	2 cut(s)	536, 739
Fsp4HI	GCNGC	1 cut(s)	122
FspAI	RTGCGCAY	1 cut(s)	153
FspBI	CTAG	5 cut(s)	114, 396, 566, 584, 916
FspI	TGCGCA	2 cut(s)	153, 651
GlaI	GCGC	3 cut(s)	153, 166, 651
GluI	GCNGC	1 cut(s)	122
HaeII	RGCGCY	1 cut(s)	168
HaeIII	GGCC	1 cut(s)	456
HapII	CCGG	2 cut(s)	36, 233
HhaI	GCGC	3 cut(s)	154, 167, 652
Hin1II	CATG	2 cut(s)	131, 837
Hin6I	GCGC	3 cut(s)	152, 165, 650
HinP1I	GCGC	3 cut(s)	152, 165, 650
HinfI	GANTC	6 cut(s)	80, 174, 270, 297, 329, 903
HpaII	CCGG	2 cut(s)	36, 233
HphI	GGTGA	4 cut(s)	457, 727, 752, 790
Hpy166II	GTNNAC	1 cut(s)	754
Hpy188III	TCNNGA	4 cut(s)	135, 474, 553, 829
Hpy8I	GTNNAC	1 cut(s)	754
Hpy99I	CGWCG	1 cut(s)	362
HpyAV	CCTTC	3 cut(s)	194, 506, 791
HpyCH4III	ACNGT	3 cut(s)	773, 787, 852
HpyCH4IV	ACGT	1 cut(s)	89
HpyCH4V	TGCA	3 cut(s)	77, 121, 427
HpyF10VI	GCNNNNNNNGC	4 cut(s)	74, 149, 350, 401
HpyF3I	CTNAG	2 cut(s)	384, 633
HpySE526I	ACGT	1 cut(s)	89
Hsp92II	CATG	2 cut(s)	131, 837
HspAI	GCGC	3 cut(s)	152, 165, 650
Ksp22I	TGATCA	1 cut(s)	595
Kzo9I	GATC	5 cut(s)	45, 100, 137, 308, 595
LmnI	GCTCC	3 cut(s)	4, 9, 129
Lsp1109I	GCAGC	1 cut(s)	133
LweI	GCATC	1 cut(s)	163
MaeI	CTAG	5 cut(s)	114, 396, 566, 584, 916
MaeII	ACGT	1 cut(s)	89
MaeIII	GTNAC	2 cut(s)	16, 85
MalI	GATC	5 cut(s)	47, 102, 139, 310, 597
MbiI	CCGCTC	1 cut(s)	7
MboI	GATC	5 cut(s)	45, 100, 137, 308, 595
MboII	GAAGA	7 cut(s)	326, 533, 637, 730, 793, 817, 900
MflI	RGATCY	3 cut(s)	45, 137, 308
MluCI	AATT	2 cut(s)	286, 760
MlyI	GAGTC	4 cut(s)	89, 183, 291, 338
MmeI	TCCRAC	1 cut(s)	340
MnlI	CCTC	6 cut(s)	348, 356, 459, 478, 628, 717
MroXI	GAANNNNTTC	2 cut(s)	821, 907
MseI	TTAA	1 cut(s)	789
MspA1I	CMGCKG	2 cut(s)	404, 707
MspI	CCGG	2 cut(s)	36, 233
MspR9I	CCNGG	2 cut(s)	43, 737
Mva1269I	GAATGC	2 cut(s)	123, 429
MvaI	CCWGG	2 cut(s)	43, 737
MwoI	GCNNNNNNNGC	4 cut(s)	74, 149, 350, 401
NcoI	CCATGG	1 cut(s)	127
NdeII	GATC	5 cut(s)	45, 100, 137, 308, 595
NlaIII	CATG	2 cut(s)	131, 837
NlaIV	GGNNCC	5 cut(s)	11, 40, 47, 139, 477
NmeAIII	GCCGAG	1 cut(s)	38
NmuCI	GTSAC	1 cut(s)	16
NsbI	TGCGCA	2 cut(s)	153, 651
PceI	AGGCCT	1 cut(s)	456
PcsI	WCGNNNNNNNCGW	1 cut(s)	188
PctI	GAATGC	2 cut(s)	123, 429
PdmI	GAANNNNTTC	2 cut(s)	821, 907
PfeI	GAWTC	2 cut(s)	270, 903
PkrI	GCNGC	1 cut(s)	123
PleI	GAGTC	4 cut(s)	88, 182, 291, 337
PpsI	GAGTC	4 cut(s)	88, 182, 291, 337
Psp6I	CCWGG	2 cut(s)	41, 735
PspGI	CCWGG	2 cut(s)	41, 735
PspN4I	GGNNCC	5 cut(s)	11, 40, 47, 139, 477
PspPI	GGNCC	2 cut(s)	476, 848
PsuI	RGATCY	3 cut(s)	45, 137, 308
PvuII	CAGCTG	2 cut(s)	404, 707
RsaI	GTAC	2 cut(s)	470, 755
RsaNI	GTAC	2 cut(s)	469, 754
SaqAI	TTAA	1 cut(s)	789
SatI	GCNGC	1 cut(s)	122
Sau3AI	GATC	5 cut(s)	45, 100, 137, 308, 595
Sau96I	GGNCC	2 cut(s)	476, 848
SchI	GAGTC	4 cut(s)	89, 183, 291, 338
ScrFI	CCNGG	2 cut(s)	43, 737
SfaNI	GCATC	1 cut(s)	163
SinI	GGWCC	2 cut(s)	476, 848
Sse9I	AATT	2 cut(s)	286, 760
SseBI	AGGCCT	1 cut(s)	456
SsiI	CCGC	2 cut(s)	7, 141
SspMI	CTAG	5 cut(s)	114, 396, 566, 584, 916
StuI	AGGCCT	1 cut(s)	456
StyD4I	CCNGG	2 cut(s)	41, 735
StyI	CCWWGG	2 cut(s)	127, 451
TaaI	ACNGT	3 cut(s)	773, 787, 852
TaiI	ACGT	1 cut(s)	92
TaqI	TCGA	3 cut(s)	483, 618, 686
TasI	AATT	2 cut(s)	286, 760
TatI	WGTACW	1 cut(s)	753
TfiI	GAWTC	2 cut(s)	270, 903
Tru1I	TTAA	1 cut(s)	789
Tru9I	TTAA	1 cut(s)	789
TseFI	GTSAC	1 cut(s)	16
TseI	GCWGC	1 cut(s)	121
Tsp45I	GTSAC	1 cut(s)	16
TspDTI	ATGAA	1 cut(s)	746
VpaK11BI	GGWCC	2 cut(s)	476, 848
XapI	RAATTY	2 cut(s)	286, 760
XmnI	GAANNNNTTC	2 cut(s)	821, 907
XspI	CTAG	5 cut(s)	114, 396, 566, 584, 916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.