Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008747

Physical Location & Seq

Genomic Coordinates Reverse (-)

6803486 .. 6805092

Gene Structure 1607 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G19670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGGCGGCGATAGAGGACAGTCCAACGTTTTCCTCTGTGGTAACTCCGGCGGCTTTTGAGATAGGCAGCCTCCCGACAACCGAGATACCGGTGGATCCGGTGGAAAATGATTCAACAGCACCGCCAAAACCGGTGAGAATCACCTGTCCAACAGTCGCCGGAACTTATCCCGTCGTTTTATTCTTCCATGGCTTTTATCTTCGCAACTACTTCTACTCTGACGTTCTTAACCACATCGCTTCGCATGGTTACATTCTTGTAGCCCCACAGTTGTGCAAATTATTGCCGCCGGGAGGGCAAGTGGAAGTGGACGATGCTGGAAGTGTGATAAACTGGGCATCGGAAAACCTCAAAGCTCACCTACCAACTTCGGTAAATGCTAATGGAAAATACACCTCACTCGTGGGCCACAGCCGCGGTGGGAAAACGGCGTTTGCGGTTGCGCTAGGCCATGCCGCAACATTAGACCCATCCATCACGTTTTCAGCTCTAATAGGAATTGATCCAGTCGCAGGAACTAACAAATACATTAGAACCGATCCGCATATCTTAACGTATAAACCGGAATCTTTCGAGCTGGACATACCGGTTGCAGTGGTGGGAACCGGACTCGGACCGAAGTGGAACAACGTGATGCCACCATGCGCACCAACGGACTTAAACCATGAGGAGTTTTACAAAGAGTGTAAGGCGACGAAAGCCCATTTCGTGGCTGCGGATTACGGACATATGGATATGTTGGACGATGATTTGCCCGGTTTTGTTGGGTTTATGGCCGGTTGTATGTGTAAGAATGGGCAAAGAAAAAAGTCTGAGATGAGGAGCTTTGTAGGTGGAATTGTGGTTGCGTTTCTCAAGTATAGTTTGTGGGGTGAAAAAGCGGAGATTCGATTGATTGTGAAGGATCCTTCCGTTTCTCCGGCCAAGCTTGATCCTTCACCTGAGTTGGAAGAAGCTTCTGGTATCTTCGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006725 GO:0006778 GO:0006787 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009056 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009987 GO:0015994 GO:0015996 GO:0016787 GO:0016788 GO:0019439 GO:0033013 GO:0033015 GO:0034641 GO:0042440 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046149 GO:0046483 GO:0046700 GO:0047746 GO:0050832 GO:0050896 GO:0051186 GO:0051187 GO:0051704 GO:0051707 GO:0052689 GO:0071704 GO:0098542 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00860 ko01100 ko01110 map00860 map01100 map01110

Pfam Domains

Protein Families

Chlorophyllase Chlorophyllase2

Protein Analysis

324

Amino Acids

34.85

Weight (kDa)

5.44

Isoelectric Point (pI)

44.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Chlorophyllase	PF07224	15 - 315	1.4e-133	Chlorophyllase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008747)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19670
fragaria_vesca	FvH4_2g23050
malus_domestica	MD03G1259000.v1.1 MD03G1259100.v1.1 MD11G1279400.v1.1
prunus_persica	Prupe.8G235600_v2.0.a1
pyrus_communis	pycom03g20670
rosa_chinensis	RchiOBHm_Chr6g0290141
rosa_laevigata	RLG00000012237 RLG00000012242
rosa_multiflora	Rmu_sc0002902.1_g000027 Rmu_sc0010520.1_g000005
rosa_roxburghii	Rroxscaffold_7G00177300
rosa_rugosa	Rorug06G0210200 Rorug06G0210300
rosa_samantha	Rh6AG320400 Rh6AG320700 Rh6BG328000 Rh6BG328100 Rh6CG334000 Rh6DG321100
rosa_wichuraiana	Rw6G027650 Rw6G027700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	646
AccB7I	CCANNNNNTGG	1 cut(s)	709
AccII	CGCG	1 cut(s)	417
AclI	AACGTT	1 cut(s)	26
AclWI	GGATC	7 cut(s)	89, 102, 497, 533, 899, 912, 926
AcoI	YGGCCR	2 cut(s)	774, 921
AfiI	CCNNNNNNNGG	3 cut(s)	293, 512, 709
AgeI	ACCGGT	3 cut(s)	88, 130, 586
AgsI	TTSAA	1 cut(s)	114
AleI	CACNNNNGTG	1 cut(s)	271
AluBI	AGCT	6 cut(s)	356, 488, 577, 825, 928, 956
AluI	AGCT	6 cut(s)	356, 488, 577, 825, 928, 956
AlwI	GGATC	7 cut(s)	89, 102, 497, 533, 899, 912, 926
AoxI	GGCC	4 cut(s)	406, 448, 774, 921
ApeKI	GCWGC	2 cut(s)	66, 713
AsiGI	ACCGGT	3 cut(s)	88, 130, 586
AspLEI	GCGC	2 cut(s)	445, 647
AspS9I	GGNCC	2 cut(s)	406, 614
AsuC2I	CCSGG	2 cut(s)	291, 756
AsuHPI	GGTGA	5 cut(s)	133, 145, 350, 884, 930
AvaII	GGWCC	1 cut(s)	614
BamHI	GGATCC	2 cut(s)	94, 904
BauI	CACGAG	1 cut(s)	401
BbvI	GCAGC	2 cut(s)	78, 700
BccI	CCATC	2 cut(s)	478, 482
BceAI	ACGGC	1 cut(s)	444
BcnI	CCSGG	2 cut(s)	291, 756
BfaI	CTAG	2 cut(s)	446, 973
BglI	GCCNNNNNGGC	1 cut(s)	295
BisI	GCNGC	7 cut(s)	6, 51, 67, 287, 415, 456, 714
BlsI	GCNGC	7 cut(s)	7, 52, 68, 288, 416, 457, 715
Bme1390I	CCNGG	2 cut(s)	291, 756
Bme18I	GGWCC	1 cut(s)	614
BmgT120I	GGNCC	2 cut(s)	406, 614
BmiI	GGNNCC	3 cut(s)	96, 604, 906
BmrFI	CCNGG	2 cut(s)	291, 756
BmrI	ACTGGG	1 cut(s)	343
BmsI	GCATC	3 cut(s)	304, 347, 624
BmuI	ACTGGG	1 cut(s)	343
BpuEI	CTTGAG	1 cut(s)	839
BpuMI	CCSGG	2 cut(s)	291, 756
BsaJI	CCNNGG	2 cut(s)	187, 415
BsaWI	WCCGGW	6 cut(s)	88, 97, 130, 562, 586, 605
BsaXI	ACNNNNNCTCC	2 cut(s)	285, 315
Bsc4I	CCNNNNNNNGG	3 cut(s)	293, 512, 709
Bse118I	RCCGGY	4 cut(s)	88, 130, 586, 776
Bse1I	ACTGG	2 cut(s)	338, 506
BseDI	CCNNGG	2 cut(s)	187, 415
BseGI	GGATG	1 cut(s)	470
BseLI	CCNNNNNNNGG	3 cut(s)	293, 512, 709
BseMII	CTCAG	2 cut(s)	804, 933
BseNI	ACTGG	2 cut(s)	338, 506
BseRI	GAGGAG	2 cut(s)	683, 835
BseXI	GCAGC	2 cut(s)	78, 700
Bsh1236I	CGCG	1 cut(s)	417
BshFI	GGCC	4 cut(s)	408, 450, 776, 923
BshTI	ACCGGT	3 cut(s)	88, 130, 586
BslI	CCNNNNNNNGG	3 cut(s)	293, 512, 709
BsnI	GGCC	4 cut(s)	408, 450, 776, 923
Bsp143I	GATC	5 cut(s)	94, 502, 538, 904, 931
Bsp19I	CCATGG	1 cut(s)	187
BspANI	GGCC	4 cut(s)	408, 450, 776, 923
BspCNI	CTCAG	2 cut(s)	805, 934
BspFNI	CGCG	1 cut(s)	417
BspLI	GGNNCC	3 cut(s)	96, 604, 906
BspPI	GGATC	7 cut(s)	89, 102, 497, 533, 899, 912, 926
BsrFI	RCCGGY	4 cut(s)	88, 130, 586, 776
BsrI	ACTGG	2 cut(s)	338, 506
BssAI	RCCGGY	4 cut(s)	88, 130, 586, 776
BssECI	CCNNGG	2 cut(s)	187, 415
BssMI	GATC	5 cut(s)	94, 502, 538, 904, 931
BssSI	CACGAG	1 cut(s)	401
BssT1I	CCWWGG	1 cut(s)	187
Bst2BI	CACGAG	1 cut(s)	401
Bst4CI	ACNGT	3 cut(s)	20, 154, 270
BstDEI	CTNAG	2 cut(s)	813, 942
BstDSI	CCRYGG	2 cut(s)	187, 415
BstF5I	GGATG	1 cut(s)	470
BstFNI	CGCG	1 cut(s)	417
BstHHI	GCGC	2 cut(s)	445, 647
BstKTI	GATC	5 cut(s)	97, 505, 541, 907, 934
BstMBI	GATC	5 cut(s)	94, 502, 538, 904, 931
BstMWI	GCNNNNNNNGC	3 cut(s)	295, 414, 698
BstSCI	CCNGG	2 cut(s)	289, 754
BstUI	CGCG	1 cut(s)	417
BstV1I	GCAGC	2 cut(s)	78, 700
BstX2I	RGATCY	2 cut(s)	94, 904
BstYI	RGATCY	2 cut(s)	94, 904
BsuRI	GGCC	4 cut(s)	408, 450, 776, 923
BtgI	CCRYGG	2 cut(s)	187, 415
BtgZI	GCGATG	1 cut(s)	220
BtsCI	GGATG	1 cut(s)	470
BtsI	GCAGTG	1 cut(s)	600
BtsIMutI	CAGTG	1 cut(s)	600
CfoI	GCGC	2 cut(s)	445, 647
Cfr10I	RCCGGY	4 cut(s)	88, 130, 586, 776
Cfr13I	GGNCC	2 cut(s)	406, 614
Cfr42I	CCGCGG	1 cut(s)	418
CpoI	CGGWCCG	1 cut(s)	614
CspAI	ACCGGT	3 cut(s)	88, 130, 586
CspI	CGGWCCG	1 cut(s)	614
CviAII	CATG	5 cut(s)	188, 245, 452, 642, 665
DdeI	CTNAG	2 cut(s)	813, 942
DpnI	GATC	5 cut(s)	96, 504, 540, 906, 933
DpnII	GATC	5 cut(s)	94, 502, 538, 904, 931
EaeI	YGGCCR	2 cut(s)	774, 921
Eco130I	CCWWGG	1 cut(s)	187
Eco47I	GGWCC	1 cut(s)	614
EcoT14I	CCWWGG	1 cut(s)	187
ErhI	CCWWGG	1 cut(s)	187
FaeI	CATG	5 cut(s)	191, 248, 455, 645, 668
FatI	CATG	5 cut(s)	187, 244, 451, 641, 664
FauNDI	CATATG	1 cut(s)	729
Fnu4HI	GCNGC	7 cut(s)	6, 51, 67, 287, 415, 456, 714
FokI	GGATG	1 cut(s)	457
Fsp4HI	GCNGC	7 cut(s)	6, 51, 67, 287, 415, 456, 714
FspAI	RTGCGCAY	1 cut(s)	646
FspBI	CTAG	2 cut(s)	446, 973
FspI	TGCGCA	1 cut(s)	646
GlaI	GCGC	2 cut(s)	444, 646
GluI	GCNGC	7 cut(s)	6, 51, 67, 287, 415, 456, 714
HaeIII	GGCC	4 cut(s)	408, 450, 776, 923
HhaI	GCGC	2 cut(s)	445, 647
Hin1II	CATG	5 cut(s)	191, 248, 455, 645, 668
Hin6I	GCGC	2 cut(s)	443, 645
HinP1I	GCGC	2 cut(s)	443, 645
HindIII	AAGCTT	2 cut(s)	926, 954
HinfI	GANTC	5 cut(s)	110, 138, 566, 609, 886
HphI	GGTGA	5 cut(s)	133, 145, 350, 884, 930
Hpy166II	GTNNAC	1 cut(s)	310
Hpy188I	TCNGA	4 cut(s)	220, 343, 614, 814
Hpy188III	TCNNGA	1 cut(s)	73
Hpy8I	GTNNAC	1 cut(s)	310
Hpy99I	CGWCG	2 cut(s)	176, 697
HpyAV	CCTTC	3 cut(s)	895, 918, 945
HpyCH4III	ACNGT	3 cut(s)	20, 154, 270
HpyCH4IV	ACGT	5 cut(s)	26, 222, 479, 554, 630
HpyCH4V	TGCA	2 cut(s)	276, 593
HpyF10VI	GCNNNNNNNGC	3 cut(s)	295, 414, 698
HpyF3I	CTNAG	2 cut(s)	813, 942
HpySE526I	ACGT	5 cut(s)	26, 222, 479, 554, 630
Hsp92II	CATG	5 cut(s)	191, 248, 455, 645, 668
HspAI	GCGC	2 cut(s)	443, 645
KspI	CCGCGG	1 cut(s)	418
Kzo9I	GATC	5 cut(s)	94, 502, 538, 904, 931
LmnI	GCTCC	1 cut(s)	822
Lsp1109I	GCAGC	2 cut(s)	78, 700
LweI	GCATC	3 cut(s)	304, 347, 624
MaeI	CTAG	2 cut(s)	446, 973
MaeII	ACGT	5 cut(s)	26, 222, 479, 554, 630
MaeIII	GTNAC	2 cut(s)	40, 248
MalI	GATC	5 cut(s)	96, 504, 540, 906, 933
MboI	GATC	5 cut(s)	94, 502, 538, 904, 931
MboII	GAAGA	4 cut(s)	175, 191, 958, 962
MflI	RGATCY	2 cut(s)	94, 904
MluCI	AATT	3 cut(s)	278, 498, 837
MlyI	GAGTC	1 cut(s)	603
MmeI	TCCRAC	4 cut(s)	47, 173, 720, 927
MnlI	CCTC	8 cut(s)	7, 43, 80, 287, 359, 406, 661, 813
MseI	TTAA	3 cut(s)	228, 551, 659
MslI	CAYNNNNRTG	1 cut(s)	271
MspA1I	CMGCKG	1 cut(s)	417
MspR9I	CCNGG	2 cut(s)	291, 756
MvnI	CGCG	1 cut(s)	417
MwoI	GCNNNNNNNGC	3 cut(s)	295, 414, 698
NciI	CCSGG	2 cut(s)	291, 756
NcoI	CCATGG	1 cut(s)	187
NdeI	CATATG	1 cut(s)	729
NdeII	GATC	5 cut(s)	94, 502, 538, 904, 931
NlaIII	CATG	5 cut(s)	191, 248, 455, 645, 668
NlaIV	GGNNCC	3 cut(s)	96, 604, 906
NsbI	TGCGCA	1 cut(s)	646
OliI	CACNNNNGTG	1 cut(s)	271
PfeI	GAWTC	4 cut(s)	110, 138, 566, 886
PflMI	CCANNNNNTGG	1 cut(s)	709
PinAI	ACCGGT	3 cut(s)	88, 130, 586
PkrI	GCNGC	7 cut(s)	7, 52, 68, 288, 416, 457, 715
PleI	GAGTC	1 cut(s)	603
PpsI	GAGTC	1 cut(s)	603
Psp1406I	AACGTT	1 cut(s)	26
PspN4I	GGNNCC	3 cut(s)	96, 604, 906
PspPI	GGNCC	2 cut(s)	406, 614
PsuI	RGATCY	2 cut(s)	94, 904
RseI	CAYNNNNRTG	1 cut(s)	271
Rsr2I	CGGWCCG	1 cut(s)	614
RsrII	CGGWCCG	1 cut(s)	614
SacII	CCGCGG	1 cut(s)	418
SaqAI	TTAA	3 cut(s)	228, 551, 659
SatI	GCNGC	7 cut(s)	6, 51, 67, 287, 415, 456, 714
Sau3AI	GATC	5 cut(s)	94, 502, 538, 904, 931
Sau96I	GGNCC	2 cut(s)	406, 614
SchI	GAGTC	1 cut(s)	603
ScrFI	CCNGG	2 cut(s)	291, 756
SfaNI	GCATC	3 cut(s)	304, 347, 624
Sfr303I	CCGCGG	1 cut(s)	418
SgrBI	CCGCGG	1 cut(s)	418
SinI	GGWCC	1 cut(s)	614
SmiMI	CAYNNNNRTG	1 cut(s)	271
SmlI	CTYRAG	1 cut(s)	854
SmoI	CTYRAG	1 cut(s)	854
Sse9I	AATT	3 cut(s)	278, 498, 837
SspMI	CTAG	2 cut(s)	446, 973
StyD4I	CCNGG	2 cut(s)	289, 754
StyI	CCWWGG	1 cut(s)	187
TaaI	ACNGT	3 cut(s)	20, 154, 270
TaiI	ACGT	5 cut(s)	29, 225, 482, 557, 633
TaqI	TCGA	2 cut(s)	573, 889
TaqII	GACCGA	1 cut(s)	631
TasI	AATT	3 cut(s)	278, 498, 837
TauI	GCSGC	5 cut(s)	8, 53, 289, 417, 458
TfiI	GAWTC	4 cut(s)	110, 138, 566, 886
Tru1I	TTAA	3 cut(s)	228, 551, 659
Tru9I	TTAA	3 cut(s)	228, 551, 659
TscAI	CASTG	1 cut(s)	600
TseI	GCWGC	2 cut(s)	66, 713
TspGWI	ACGGA	3 cut(s)	668, 738, 901
TspRI	CASTG	1 cut(s)	600
Van91I	CCANNNNNTGG	1 cut(s)	709
VpaK11BI	GGWCC	1 cut(s)	614
XcmI	CCANNNNNNNNNTGG	1 cut(s)	416
XspI	CTAG	2 cut(s)	446, 973

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.