Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005326

Physical Location & Seq

Genomic Coordinates Reverse (-)

11869752 .. 11872926

Gene Structure 3175 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G32780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1185 bp

ATGGCGGAGACTCAAGGAAAGGTCATCACTTGTAAAGCTGCTGTCGTATGGGGTCCAAAAGTGCCGCTTGTAATTCAAGAAATATGCGTCGATCCTCCTCAGAAAATGGAAGTCCGTGTTAAAATTCTTTACTCCTCCATTTGCCACACCGATCTCGGATGTTGGAACGGCACGAACGAAGCTGAACGAGCATTTCCAAGGATTCTTGGCCATGAAGCTGTCGGGATTGTAGAGAGTGTTGGAGAAGGAGTAAAAGATGTGAAAGAAGGAGACTACGTGATTCCGACTTTCAATGGAGAATGTGGTGAATGTAAAGTGTGTAAGAGAGAAGAAAGTAATCTCTGTGAGCGATATCATGTGGATCCTATGAAGAGGGTGATGGTGAATGATGGAGGGACGAGATTCTCAACCACCATAAACAAGGACGGTGGTTCGAGCCAAAGCCAACCTATATATCACTTCCTTAACACCTCCACGTTCACCGAATACACTGTCTTGGACTCGGCTTGCGTCGTCAAGATCGATCCTAATTCTCCTCTCAAGCAAATGAGCCTCTTGAGTTGTGGTGTCTCAACTGGGGTTGGAGCAGCTTGGAACATTGCAAATGTGAAGGAAGGAAAAAGCACTGCTGTCTTTGGATTGGGTTCCGTTGGACTCGCTGTTGCTGAAGGTGCAAGAGCTAGAGGAGCTTCTAGGATCATTGGTGTTGATGCTAATGCTTCCAAATTTGAGAAAGGTAAACTGATGGGAGTAACAGATTTCATAAACCCTAAAGACTTAACTAAGCCAGTACATCAGATGATACGAGAGATAACGGGAGGAGGCGTGGACTATAGCTTTGAATGTACAGGAAACGTTGATGTTCTTCGCGAAGCCTTTTTATCCACTCACGTCGGTTGGGGATCGACAGTACTTGTTGGGATCTATCCGACGCCAAGAACATTGCCTCTTCACCCAATGGAGCTTTTCGACGGCCGTAGAATCACCGGTTCTGTGTTTGGTGGCTTCAAGCCCAAATCTCAGCTTCCAAATTTCGCCCAACAATGCATGAAAGGGGTTGTGAAATTGGAACCTTTTATTACCAATGAGCTTCCATTTGAGAAGATAAACGATGCGTTTCAGCTGCTTCGCGATGGAAAATCTCTTCGGTGCATTCTTCAAATCTCTAAACTTCTCAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00010 ko00071 ko00350 ko00625 ko00626 ko00830 ko00980 ko00982 ko01100 ko01110 ko01120 ko01130 ko01220 map00010 map00071 map00350 map00625 map00626 map00830 map00980 map00982 map01100 map01110 map01120 map01130 map01220

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

394

Amino Acids

42.91

Weight (kDa)

8.34

Isoelectric Point (pI)

33.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ADH_N	PF08240	35 - 174	1.2e-20	Alcohol dehydrogenase GroES-like domain
ADH_zinc_N	PF00107	217 - 343	4.4e-23	Zinc-binding dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005326)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32780 AT1G64710 AT1G64710 AT1G64710
fragaria_vesca	FvH4_5g10640 FvH4_5g10640 FvH4_5g10640
malus_domestica	MD06G1121600.v1.1
prunus_persica	Prupe.5G132300_v2.0.a1
pyrus_communis	pycom06g11270
rosa_chinensis	RchiOBHm_Chr7g0187491 RchiOBHm_Chr7g0187501
rosa_laevigata	RLG00000004776 RLG00000004777
rosa_multiflora	Rmu_sc0001230.1_g000002 Rmu_sc0019127.1_g000001
rosa_roxburghii	Rroxscaffold_3G00267380 Rroxscaffold_3G00267390
rosa_rugosa	Rorug06G0482000
rosa_samantha	Rh7AG086500 Rh7AG086700 Rh7BG088100 Rh7BG088200 Rh7CG087400 Rh7CG087500 Rh7DG089000 Rh7DG089100
rosa_wichuraiana	Rw7G007630 Rw7G007650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	870, 1131
AciI	CCGC	2 cut(s)	5, 65
AclI	AACGTT	1 cut(s)	855
AclWI	GGATC	7 cut(s)	86, 356, 369, 518, 704, 910, 929
AcoI	YGGCCR	2 cut(s)	208, 973
AcsI	RAATTY	3 cut(s)	123, 725, 1030
AcuI	CTGAAG	1 cut(s)	687
AcyI	GRCGYC	1 cut(s)	932
AfaI	GTAC	3 cut(s)	792, 847, 912
AgeI	ACCGGT	1 cut(s)	986
AgsI	TTSAA	5 cut(s)	77, 292, 842, 1009, 1160
AjiI	CACGTC	1 cut(s)	892
Alw26I	GTCTC	3 cut(s)	2, 264, 574
AlwI	GGATC	7 cut(s)	86, 356, 369, 518, 704, 910, 929
AoxI	GGCC	2 cut(s)	208, 973
ApeKI	GCWGC	3 cut(s)	38, 587, 1123
ApoI	RAATTY	3 cut(s)	123, 725, 1030
ArsI	GACNNNNNNTTYG	4 cut(s)	477, 509, 821, 853
AsiGI	ACCGGT	1 cut(s)	986
AspS9I	GGNCC	1 cut(s)	53
AsuHPI	GGTGA	6 cut(s)	317, 388, 394, 472, 944, 976
AvaII	GGWCC	1 cut(s)	53
BalI	TGGCCA	1 cut(s)	210
BamHI	GGATCC	1 cut(s)	361
BbvI	GCAGC	3 cut(s)	25, 599, 1110
BccI	CCATC	4 cut(s)	373, 383, 739, 1127
BceAI	ACGGC	3 cut(s)	184, 960, 988
BcoDI	GTCTC	3 cut(s)	2, 264, 574
BfaI	CTAG	2 cut(s)	681, 693
BfmI	CTRYAG	1 cut(s)	832
BisI	GCNGC	4 cut(s)	39, 65, 588, 1124
BlsI	GCNGC	4 cut(s)	40, 66, 589, 1125
BmcAI	AGTACT	1 cut(s)	912
Bme18I	GGWCC	1 cut(s)	53
BmgBI	CACGTC	1 cut(s)	892
BmgT120I	GGNCC	1 cut(s)	53
BmiI	GGNNCC	4 cut(s)	54, 363, 646, 1071
BmrI	ACTGGG	1 cut(s)	585
BmsI	GCATC	2 cut(s)	700, 1102
BmuI	ACTGGG	1 cut(s)	585
BpuEI	CTTGAG	3 cut(s)	524, 577, 1160
Bsa29I	ATCGAT	1 cut(s)	522
BsaAI	YACGTR	1 cut(s)	277
BsaHI	GRCGYC	1 cut(s)	932
BsaJI	CCNNGG	1 cut(s)	197
BsaWI	WCCGGW	1 cut(s)	986
BsaXI	ACNNNNNCTCC	6 cut(s)	234, 261, 264, 291, 810, 840
Bse118I	RCCGGY	1 cut(s)	986
Bse1I	ACTGG	2 cut(s)	580, 788
Bse3DI	GCAATG	2 cut(s)	597, 941
BseCI	ATCGAT	1 cut(s)	522
BseDI	CCNNGG	1 cut(s)	197
BseGI	GGATG	1 cut(s)	164
BseMI	GCAATG	2 cut(s)	597, 941
BseMII	CTCAG	2 cut(s)	113, 1034
BseNI	ACTGG	2 cut(s)	580, 788
BseRI	GAGGAG	5 cut(s)	87, 124, 525, 699, 834
BseX3I	CGGCCG	1 cut(s)	973
BseXI	GCAGC	3 cut(s)	25, 599, 1110
Bsh1236I	CGCG	2 cut(s)	870, 1131
Bsh1285I	CGRYCG	1 cut(s)	976
BshFI	GGCC	2 cut(s)	210, 975
BshTI	ACCGGT	1 cut(s)	986
BshVI	ATCGAT	1 cut(s)	522
BsiEI	CGRYCG	1 cut(s)	976
BsiSI	CCGG	1 cut(s)	987
BslFI	GGGAC	1 cut(s)	409
BsmAI	GTCTC	3 cut(s)	2, 264, 574
BsmFI	GGGAC	1 cut(s)	409
BsmI	GAATGC	1 cut(s)	1152
BsnI	GGCC	2 cut(s)	210, 975
Bsp1407I	TGTACA	1 cut(s)	845
Bsp143I	GATC	8 cut(s)	91, 151, 361, 519, 523, 696, 902, 921
Bsp68I	TCGCGA	2 cut(s)	870, 1131
BspACI	CCGC	2 cut(s)	5, 65
BspANI	GGCC	2 cut(s)	210, 975
BspCNI	CTCAG	2 cut(s)	112, 1033
BspDI	ATCGAT	1 cut(s)	522
BspFNI	CGCG	2 cut(s)	870, 1131
BspLI	GGNNCC	4 cut(s)	54, 363, 646, 1071
BspPI	GGATC	7 cut(s)	86, 356, 369, 518, 704, 910, 929
BsrDI	GCAATG	2 cut(s)	597, 941
BsrFI	RCCGGY	1 cut(s)	986
BsrGI	TGTACA	1 cut(s)	845
BsrI	ACTGG	2 cut(s)	580, 788
BssAI	RCCGGY	1 cut(s)	986
BssECI	CCNNGG	1 cut(s)	197
BssMI	GATC	8 cut(s)	91, 151, 361, 519, 523, 696, 902, 921
BssNI	GRCGYC	1 cut(s)	932
BssT1I	CCWWGG	1 cut(s)	197
Bst4CI	ACNGT	3 cut(s)	428, 493, 910
Bst6I	CTCTTC	3 cut(s)	365, 954, 1149
BstACI	GRCGYC	1 cut(s)	932
BstAUI	TGTACA	1 cut(s)	845
BstBAI	YACGTR	1 cut(s)	277
BstC8I	GCNNGC	1 cut(s)	508
BstDEI	CTNAG	3 cut(s)	99, 783, 1020
BstF5I	GGATG	1 cut(s)	164
BstFNI	CGCG	2 cut(s)	870, 1131
BstKTI	GATC	8 cut(s)	94, 154, 364, 522, 526, 699, 905, 924
BstMAI	GTCTC	3 cut(s)	2, 264, 574
BstMBI	GATC	8 cut(s)	91, 151, 361, 519, 523, 696, 902, 921
BstMCI	CGRYCG	1 cut(s)	976
BstMWI	GCNNNNNNNGC	3 cut(s)	188, 671, 686
BstSFI	CTRYAG	1 cut(s)	832
BstUI	CGCG	2 cut(s)	870, 1131
BstV1I	GCAGC	3 cut(s)	25, 599, 1110
BstX2I	RGATCY	2 cut(s)	361, 921
BstYI	RGATCY	2 cut(s)	361, 921
BstZI	CGGCCG	1 cut(s)	973
Bsu15I	ATCGAT	1 cut(s)	522
BsuRI	GGCC	2 cut(s)	210, 975
BsuTUI	ATCGAT	1 cut(s)	522
BtgZI	GCGATG	1 cut(s)	1146
BtrI	CACGTC	1 cut(s)	892
BtsCI	GGATG	1 cut(s)	164
BtsI	GCAGTG	1 cut(s)	624
BtsIMutI	CAGTG	2 cut(s)	489, 624
BtuMI	TCGCGA	2 cut(s)	870, 1131
Cac8I	GCNNGC	1 cut(s)	508
Cfr10I	RCCGGY	1 cut(s)	986
Cfr13I	GGNCC	1 cut(s)	53
ClaI	ATCGAT	1 cut(s)	522
CseI	GACGC	3 cut(s)	76, 499, 940
Csp6I	GTAC	3 cut(s)	791, 846, 911
CspAI	ACCGGT	1 cut(s)	986
CspCI	CAANNNNNGTGG	2 cut(s)	409, 444
CviAII	CATG	3 cut(s)	212, 356, 1048
CviQI	GTAC	3 cut(s)	791, 846, 911
DdeI	CTNAG	3 cut(s)	99, 783, 1020
DpnI	GATC	8 cut(s)	93, 153, 363, 521, 525, 698, 904, 923
DpnII	GATC	8 cut(s)	91, 151, 361, 519, 523, 696, 902, 921
EaeI	YGGCCR	2 cut(s)	208, 973
EagI	CGGCCG	1 cut(s)	973
Eam1104I	CTCTTC	3 cut(s)	365, 954, 1149
EarI	CTCTTC	3 cut(s)	365, 954, 1149
EciI	GGCGGA	1 cut(s)	20
EclXI	CGGCCG	1 cut(s)	973
Eco130I	CCWWGG	1 cut(s)	197
Eco32I	GATATC	1 cut(s)	353
Eco47I	GGWCC	1 cut(s)	53
Eco52I	CGGCCG	1 cut(s)	973
Eco57I	CTGAAG	1 cut(s)	687
EcoRV	GATATC	1 cut(s)	353
EcoT14I	CCWWGG	1 cut(s)	197
EcoT22I	ATGCAT	1 cut(s)	1049
ErhI	CCWWGG	1 cut(s)	197
FaeI	CATG	3 cut(s)	215, 359, 1051
FalI	AAGNNNNNCTT	2 cut(s)	51, 83
FaqI	GGGAC	1 cut(s)	409
FatI	CATG	3 cut(s)	211, 355, 1047
Fnu4HI	GCNGC	4 cut(s)	39, 65, 588, 1124
FokI	GGATG	1 cut(s)	171
Fsp4HI	GCNGC	4 cut(s)	39, 65, 588, 1124
FspBI	CTAG	2 cut(s)	681, 693
GluI	GCNGC	4 cut(s)	39, 65, 588, 1124
HaeIII	GGCC	2 cut(s)	210, 975
HapII	CCGG	1 cut(s)	987
HgaI	GACGC	3 cut(s)	76, 499, 940
Hin1I	GRCGYC	1 cut(s)	932
Hin1II	CATG	3 cut(s)	215, 359, 1051
HinfI	GANTC	7 cut(s)	10, 202, 280, 402, 500, 654, 981
HpaII	CCGG	1 cut(s)	987
HphI	GGTGA	6 cut(s)	317, 388, 394, 472, 944, 976
Hpy166II	GTNNAC	3 cut(s)	480, 740, 829
Hpy188I	TCNGA	5 cut(s)	102, 158, 285, 798, 930
Hpy188III	TCNNGA	7 cut(s)	77, 223, 517, 556, 869, 1130, 1177
Hpy8I	GTNNAC	3 cut(s)	480, 740, 829
Hpy99I	CGWCG	5 cut(s)	92, 515, 896, 934, 974
HpyAV	CCTTC	5 cut(s)	239, 260, 604, 608, 662
HpyCH4III	ACNGT	3 cut(s)	428, 493, 910
HpyCH4IV	ACGT	4 cut(s)	276, 476, 855, 891
HpyCH4V	TGCA	4 cut(s)	602, 674, 1047, 1152
HpyF10VI	GCNNNNNNNGC	3 cut(s)	188, 671, 686
HpyF3I	CTNAG	3 cut(s)	99, 783, 1020
HpySE526I	ACGT	4 cut(s)	276, 476, 855, 891
Hsp92I	GRCGYC	1 cut(s)	932
Hsp92II	CATG	3 cut(s)	215, 359, 1051
Kzo9I	GATC	8 cut(s)	91, 151, 361, 519, 523, 696, 902, 921
LmnI	GCTCC	3 cut(s)	584, 686, 961
LpnPI	CCDG	4 cut(s)	561, 801, 834, 1000
Lsp1109I	GCAGC	3 cut(s)	25, 599, 1110
LweI	GCATC	2 cut(s)	700, 1102
MaeI	CTAG	2 cut(s)	681, 693
MaeII	ACGT	4 cut(s)	276, 476, 855, 891
MaeIII	GTNAC	1 cut(s)	751
MalI	GATC	8 cut(s)	93, 153, 363, 521, 525, 698, 904, 923
MboI	GATC	8 cut(s)	91, 151, 361, 519, 523, 696, 902, 921
MboII	GAAGA	7 cut(s)	341, 382, 857, 941, 1114, 1136, 1148
MflI	RGATCY	2 cut(s)	361, 921
MlsI	TGGCCA	1 cut(s)	210
MluCI	AATT	6 cut(s)	72, 123, 529, 725, 1030, 1064
MluNI	TGGCCA	1 cut(s)	210
MlyI	GAGTC	3 cut(s)	4, 494, 648
MmeI	TCCRAC	6 cut(s)	143, 220, 308, 562, 631, 953
Mox20I	TGGCCA	1 cut(s)	210
Mph1103I	ATGCAT	1 cut(s)	1049
MscI	TGGCCA	1 cut(s)	210
MseI	TTAA	3 cut(s)	120, 465, 779
Msp20I	TGGCCA	1 cut(s)	210
MspA1I	CMGCKG	1 cut(s)	1123
MspI	CCGG	1 cut(s)	987
Mva1269I	GAATGC	1 cut(s)	1152
MvnI	CGCG	2 cut(s)	870, 1131
MwoI	GCNNNNNNNGC	3 cut(s)	188, 671, 686
NdeII	GATC	8 cut(s)	91, 151, 361, 519, 523, 696, 902, 921
NlaIII	CATG	3 cut(s)	215, 359, 1051
NlaIV	GGNNCC	4 cut(s)	54, 363, 646, 1071
NmeAIII	GCCGAG	1 cut(s)	482
NruI	TCGCGA	2 cut(s)	870, 1131
NsiI	ATGCAT	1 cut(s)	1049
PcsI	WCGNNNNNNNCGW	2 cut(s)	174, 519
PctI	GAATGC	1 cut(s)	1152
PfeI	GAWTC	4 cut(s)	202, 280, 402, 981
PinAI	ACCGGT	1 cut(s)	986
PkrI	GCNGC	4 cut(s)	40, 66, 589, 1125
PleI	GAGTC	3 cut(s)	4, 494, 648
PpsI	GAGTC	3 cut(s)	4, 494, 648
Ppu21I	YACGTR	1 cut(s)	277
Psp1406I	AACGTT	1 cut(s)	855
PspN4I	GGNNCC	4 cut(s)	54, 363, 646, 1071
PspPI	GGNCC	1 cut(s)	53
PsuI	RGATCY	2 cut(s)	361, 921
PvuII	CAGCTG	1 cut(s)	1123
RruI	TCGCGA	2 cut(s)	870, 1131
RsaI	GTAC	3 cut(s)	792, 847, 912
RsaNI	GTAC	3 cut(s)	791, 846, 911
SaqAI	TTAA	3 cut(s)	120, 465, 779
SatI	GCNGC	4 cut(s)	39, 65, 588, 1124
Sau3AI	GATC	8 cut(s)	91, 151, 361, 519, 523, 696, 902, 921
Sau96I	GGNCC	1 cut(s)	53
ScaI	AGTACT	1 cut(s)	912
SchI	GAGTC	3 cut(s)	4, 494, 648
SfaNI	GCATC	2 cut(s)	700, 1102
SfcI	CTRYAG	1 cut(s)	832
SinI	GGWCC	1 cut(s)	53
SmlI	CTYRAG	4 cut(s)	12, 539, 556, 1175
SmoI	CTYRAG	4 cut(s)	12, 539, 556, 1175
Sse9I	AATT	6 cut(s)	72, 123, 529, 725, 1030, 1064
SsiI	CCGC	2 cut(s)	5, 65
SspMI	CTAG	2 cut(s)	681, 693
StyI	CCWWGG	1 cut(s)	197
TaaI	ACNGT	3 cut(s)	428, 493, 910
TaiI	ACGT	4 cut(s)	279, 479, 858, 894
TaqI	TCGA	5 cut(s)	90, 434, 522, 905, 969
TasI	AATT	6 cut(s)	72, 123, 529, 725, 1030, 1064
TatI	WGTACW	3 cut(s)	790, 845, 910
TauI	GCSGC	1 cut(s)	67
TfiI	GAWTC	4 cut(s)	202, 280, 402, 981
Tru1I	TTAA	3 cut(s)	120, 465, 779
Tru9I	TTAA	3 cut(s)	120, 465, 779
TscAI	CASTG	2 cut(s)	496, 631
TseI	GCWGC	3 cut(s)	38, 587, 1123
TspDTI	ATGAA	4 cut(s)	228, 383, 751, 1064
TspGWI	ACGGA	2 cut(s)	104, 637
TspRI	CASTG	2 cut(s)	496, 631
VpaK11BI	GGWCC	1 cut(s)	53
XapI	RAATTY	3 cut(s)	123, 725, 1030
XspI	CTAG	2 cut(s)	681, 693
ZrmI	AGTACT	1 cut(s)	912
Zsp2I	ATGCAT	1 cut(s)	1049

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.