FvH4_5g10640

Alcohol dehydrogenase-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
6045590 .. 6050032
4443 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g10640.t2

Sequence Viewer

Length: 1158 bp
ATGGAGAAGACAACCGGAAAGGTCATCACTTGCAGAGCTGCTGTCGTTTGGGGTCCGGGGGAGCCTTTTGTGATGGAACAAGTTCAAGTCGACCCGCCGCAGAAAAAGGAGGTCCGAATCAAGATCCTCTTCACCTCAATCTGTCACACTGATCTCAGTGCTTGGAAAGGAGAGAATGAAGCTCAGCAGGCCTTTCCTCGAATCCTAGGCCATGAAGCCGCCGGAATCGTTGAGAGCATTGGTGAAGGAGTGACAGACATGAAAGAAGGGGATCATGTGATCCCTATCTTCAACGGGGAGTGTGGTGACTGCAAGAGCTGCAAGCATGAGAAGACTAACATCTGCAACAGCTTTGGAGTAAACCCGATGAAGACGGTGATGAACAGTGATGGTAAAACCAGGTTTTCCATAACAGCCAAGGATGGCGGTGAAAGAAAACCCGTATATCATTTTCTCAACACATCAACTTTTAGCGAGTACACAGTTCTCGAGTCCGCCTGTGTTGTCAAGATTGACTCGGAAGCTCCTCTCAAGAAGATGACGTTGCTCAGTTGTGGCGTTTCAACTGGAGTTGGTGCTGCATGGAATGTTGCCGATGTTCAACCCGGCTCAACCGTAGCCATTTTCGGTTTAGGCGCCGTCGGACTTGCCGTTGCTGAAGGAGCAAGGGCCAGGGGAGCATCTAAAATAATTGGCATTGACATTAACCCCAAGAAATTCACCATAGGCCAAACAATGGGAATCACAGATTTCATAAACCCTACCGATCTTGGAAAGCCTTTGCATGAGAGAATCAGGGAAATAACAGAAGGCGGTGTGGACTATAGCTTTGAGTGTATCGGAAACCCCGATGTTCTCCGAGAAGCCTTTCTCTCCACACATGAGGGATGGGGGTTTACAGTGATACTGGGAATTCATACAACCCCAAAAATGCTTCCACTCCATCCGATGGAGCTGTTTCTTGGTCGAGGACTTACTGGATCTGTGTTTGGAGGCTTCAAAGGGAAGAGCCAACTCCCCCGTTTTGCTAAAGAGTGCATGAGAGGGGTGGTCGATCTAGACGAGTTCATAACGCATGAGCTTCCCTTCGAAAAGATAAACGATGCATTTCAGTTGCTCGTTGAAGGCCAGTCACTGAGATGCGTTCTGCATCTGTGA

Protein Analysis

386

Amino Acids

41.81

Weight (kDa)

6.03

Isoelectric Point (pI)

22.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 4 - 99 8.6e-08 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 141 - 264 6.7e-21 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 635
AccB7I CCANNNNNTGG 2 cut(s) 736, 949
AccI GTMKAC 1 cut(s) 90
AciI CCGC 6 cut(s) 95, 98, 219, 426, 495, 813
AclWI GGATC 4 cut(s) 118, 274, 279, 988
AcsI RAATTY 2 cut(s) 716, 912
AcuI CTGAAG 1 cut(s) 678
AcyI GRCGYC 1 cut(s) 636
AfaI GTAC 1 cut(s) 479
AfiI CCNNNNNNNGG 2 cut(s) 736, 949
AgsI TTSAA 6 cut(s) 86, 292, 564, 602, 1000, 1124
AjnI CCWGG 2 cut(s) 398, 671
AluBI AGCT 8 cut(s) 38, 182, 318, 351, 524, 828, 955, 1081
AluI AGCT 8 cut(s) 38, 182, 318, 351, 524, 828, 955, 1081
AlwI GGATC 4 cut(s) 118, 274, 279, 988
AlwNI CAGNNNCTG 1 cut(s) 1135
Ama87I CYCGRG 1 cut(s) 488
AoxI GGCC 5 cut(s) 189, 208, 669, 727, 1126
ApeKI GCWGC 3 cut(s) 38, 318, 578
ApoI RAATTY 2 cut(s) 716, 912
ArsI GACNNNNNNTTYG 2 cut(s) 812, 844
Asp700I GAANNNNTTC 2 cut(s) 81, 867
AspA2I CCTAGG 1 cut(s) 205
AspLEI GCGC 1 cut(s) 638
AspS9I GGNCC 3 cut(s) 53, 112, 669
AsuC2I CCSGG 2 cut(s) 57, 606
AsuHPI GGTGA 6 cut(s) 124, 254, 317, 388, 440, 712
AsuII TTCGAA 1 cut(s) 1089
AvaI CYCGRG 1 cut(s) 488
AvaII GGWCC 2 cut(s) 53, 112
AvrII CCTAGG 1 cut(s) 205
BanI GGYRCC 1 cut(s) 635
BbsI GAAGAC 3 cut(s) 14, 338, 377
BbvI GCAGC 3 cut(s) 25, 305, 565
BccI CCATC 6 cut(s) 67, 383, 416, 882, 943, 951
BceAI ACGGC 2 cut(s) 623, 635
BciT130I CCWGG 2 cut(s) 400, 673
BcnI CCSGG 2 cut(s) 57, 606
BfaI CTAG 2 cut(s) 206, 1058
BfmI CTRYAG 1 cut(s) 823
BfoI RGCGCY 1 cut(s) 639
BisI GCNGC 5 cut(s) 39, 98, 219, 319, 579
BlnI CCTAGG 1 cut(s) 205
BlpI GCTNAGC 1 cut(s) 183
BlsI GCNGC 5 cut(s) 40, 99, 220, 320, 580
Bme1390I CCNGG 4 cut(s) 57, 400, 606, 673
Bme18I GGWCC 2 cut(s) 53, 112
BmeT110I CYCGRG 1 cut(s) 488
BmgT120I GGNCC 3 cut(s) 53, 112, 669
BmiI GGNNCC 3 cut(s) 54, 63, 637
BmrFI CCNGG 4 cut(s) 57, 400, 606, 673
BmrI ACTGGG 1 cut(s) 917
BmsI GCATC 3 cut(s) 689, 1093, 1130
BmuI ACTGGG 1 cut(s) 917
BpiI GAAGAC 3 cut(s) 14, 338, 377
BpmI CTGGAG 1 cut(s) 588
Bpu1102I GCTNAGC 1 cut(s) 183
Bpu14I TTCGAA 1 cut(s) 1089
BpuEI CTTGAG 1 cut(s) 515
BpuMI CCSGG 2 cut(s) 57, 606
BsaBI GATNNNNATC 1 cut(s) 284
BsaHI GRCGYC 1 cut(s) 636
BsaJI CCNNGG 4 cut(s) 56, 205, 417, 672
BsaWI WCCGGW 1 cut(s) 14
Bsc4I CCNNNNNNNGG 2 cut(s) 736, 949
Bse1I ACTGG 4 cut(s) 571, 912, 982, 1129
Bse8I GATNNNNATC 1 cut(s) 284
BseBI CCWGG 2 cut(s) 400, 673
BseDI CCNNGG 4 cut(s) 56, 205, 417, 672
BseGI GGATG 3 cut(s) 427, 893, 943
BseJI GATNNNNATC 1 cut(s) 284
BseLI CCNNNNNNNGG 2 cut(s) 736, 949
BseMII CTCAG 4 cut(s) 169, 197, 562, 1127
BseNI ACTGG 4 cut(s) 571, 912, 982, 1129
BseRI GAGGAG 1 cut(s) 516
BseXI GCAGC 3 cut(s) 25, 305, 565
BshFI GGCC 5 cut(s) 191, 210, 671, 729, 1128
BshNI GGYRCC 1 cut(s) 635
BsiHKCI CYCGRG 1 cut(s) 488
BsiSI CCGG 4 cut(s) 15, 56, 222, 606
BslI CCNNNNNNNGG 2 cut(s) 736, 949
BsnI GGCC 5 cut(s) 191, 210, 671, 729, 1128
BsoBI CYCGRG 1 cut(s) 488
Bsp119I TTCGAA 1 cut(s) 1089
Bsp143I GATC 7 cut(s) 123, 151, 271, 279, 766, 980, 1054
Bsp1720I GCTNAGC 1 cut(s) 183
BspACI CCGC 6 cut(s) 95, 98, 219, 426, 495, 813
BspANI GGCC 5 cut(s) 191, 210, 671, 729, 1128
BspCNI CTCAG 4 cut(s) 168, 196, 561, 1128
BspLI GGNNCC 3 cut(s) 54, 63, 637
BspPI GGATC 4 cut(s) 118, 274, 279, 988
BspQI GCTCTTC 1 cut(s) 1001
BspT104I TTCGAA 1 cut(s) 1089
BspT107I GGYRCC 1 cut(s) 635
BsrI ACTGG 4 cut(s) 571, 912, 982, 1129
BssECI CCNNGG 4 cut(s) 56, 205, 417, 672
BssMI GATC 7 cut(s) 123, 151, 271, 279, 766, 980, 1054
BssNI GRCGYC 1 cut(s) 636
BssT1I CCWWGG 2 cut(s) 205, 417
Bst2UI CCWGG 2 cut(s) 400, 673
Bst4CI ACNGT 5 cut(s) 376, 386, 484, 616, 901
Bst6I CTCTTC 2 cut(s) 134, 1001
BstACI GRCGYC 1 cut(s) 636
BstAPI GCANNNNNTGC 1 cut(s) 318
BstBI TTCGAA 1 cut(s) 1089
BstC8I GCNNGC 2 cut(s) 189, 323
BstDEI CTNAG 4 cut(s) 155, 183, 548, 1136
BstF5I GGATG 3 cut(s) 427, 893, 943
BstH2I RGCGCY 1 cut(s) 639
BstHHI GCGC 1 cut(s) 638
BstKTI GATC 7 cut(s) 126, 154, 274, 282, 769, 983, 1057
BstMBI GATC 7 cut(s) 123, 151, 271, 279, 766, 980, 1054
BstMWI GCNNNNNNNGC 4 cut(s) 188, 318, 662, 677
BstNI CCWGG 2 cut(s) 400, 673
BstSCI CCNGG 4 cut(s) 55, 398, 604, 671
BstSFI CTRYAG 1 cut(s) 823
BstV1I GCAGC 3 cut(s) 25, 305, 565
BstV2I GAAGAC 3 cut(s) 14, 338, 377
BstX2I RGATCY 2 cut(s) 123, 980
BstYI RGATCY 2 cut(s) 123, 980
BsuRI GGCC 5 cut(s) 191, 210, 671, 729, 1128
BtsCI GGATG 3 cut(s) 427, 893, 943
BtsIMutI CAGTG 5 cut(s) 147, 163, 391, 906, 1133
Cac8I GCNNGC 2 cut(s) 189, 323
CaiI CAGNNNCTG 1 cut(s) 1135
CfoI GCGC 1 cut(s) 638
Cfr13I GGNCC 3 cut(s) 53, 112, 669
CsiI ACCWGGT 1 cut(s) 398
Csp6I GTAC 1 cut(s) 478
CviAII CATG 9 cut(s) 212, 259, 275, 326, 582, 785, 881, 1039, 1076
CviQI GTAC 1 cut(s) 478
DdeI CTNAG 4 cut(s) 155, 183, 548, 1136
DinI GGCGCC 1 cut(s) 637
DpnI GATC 7 cut(s) 125, 153, 273, 281, 768, 982, 1056
DpnII GATC 7 cut(s) 123, 151, 271, 279, 766, 980, 1054
Eam1104I CTCTTC 2 cut(s) 134, 1001
EarI CTCTTC 2 cut(s) 134, 1001
EciI GGCGGA 1 cut(s) 484
Eco130I CCWWGG 2 cut(s) 205, 417
Eco147I AGGCCT 1 cut(s) 191
Eco47I GGWCC 2 cut(s) 53, 112
Eco57I CTGAAG 1 cut(s) 678
Eco88I CYCGRG 1 cut(s) 488
EcoRI GAATTC 1 cut(s) 912
EcoRII CCWGG 2 cut(s) 398, 671
EcoT14I CCWWGG 2 cut(s) 205, 417
EcoT22I ATGCAT 1 cut(s) 1108
EgeI GGCGCC 1 cut(s) 637
EheI GGCGCC 1 cut(s) 637
ErhI CCWWGG 2 cut(s) 205, 417
FaeI CATG 9 cut(s) 215, 262, 278, 329, 585, 788, 884, 1042, 1079
FalI AAGNNNNNCTT 2 cut(s) 113, 145
FatI CATG 9 cut(s) 211, 258, 274, 325, 581, 784, 880, 1038, 1075
FauI CCCGC 1 cut(s) 102
FblI GTMKAC 1 cut(s) 90
Fnu4HI GCNGC 5 cut(s) 39, 98, 219, 319, 579
FokI GGATG 3 cut(s) 434, 900, 930
Fsp4HI GCNGC 5 cut(s) 39, 98, 219, 319, 579
FspBI CTAG 2 cut(s) 206, 1058
GlaI GCGC 1 cut(s) 637
GluI GCNGC 5 cut(s) 39, 98, 219, 319, 579
GsuI CTGGAG 1 cut(s) 588
HaeII RGCGCY 1 cut(s) 639
HaeIII GGCC 5 cut(s) 191, 210, 671, 729, 1128
HapII CCGG 4 cut(s) 15, 56, 222, 606
HhaI GCGC 1 cut(s) 638
Hin1I GRCGYC 1 cut(s) 636
Hin1II CATG 9 cut(s) 215, 262, 278, 329, 585, 788, 884, 1042, 1079
Hin6I GCGC 1 cut(s) 636
HinP1I GCGC 1 cut(s) 636
HincII GTYRAC 1 cut(s) 91
HindII GTYRAC 1 cut(s) 91
HinfI GANTC 7 cut(s) 117, 201, 225, 491, 515, 741, 792
HpaII CCGG 4 cut(s) 15, 56, 222, 606
HphI GGTGA 6 cut(s) 124, 254, 317, 388, 440, 712
Hpy166II GTNNAC 5 cut(s) 91, 361, 480, 820, 897
Hpy188I TCNGA 6 cut(s) 116, 520, 644, 842, 860, 948
Hpy188III TCNNGA 5 cut(s) 121, 488, 508, 532, 1058
Hpy8I GTNNAC 5 cut(s) 91, 361, 480, 820, 897
Hpy99I CGWCG 1 cut(s) 644
HpyAV CCTTC 6 cut(s) 239, 260, 653, 803, 1096, 1118
HpyCH4III ACNGT 5 cut(s) 376, 386, 484, 616, 901
HpyCH4IV ACGT 1 cut(s) 542
HpyCH4V TGCA 9 cut(s) 33, 312, 321, 345, 581, 784, 1038, 1106, 1150
HpyF10VI GCNNNNNNNGC 4 cut(s) 188, 318, 662, 677
HpyF3I CTNAG 4 cut(s) 155, 183, 548, 1136
HpySE526I ACGT 1 cut(s) 542
Hsp92I GRCGYC 1 cut(s) 636
Hsp92II CATG 9 cut(s) 215, 262, 278, 329, 585, 788, 884, 1042, 1079
HspAI GCGC 1 cut(s) 636
KasI GGCGCC 1 cut(s) 635
Kzo9I GATC 7 cut(s) 123, 151, 271, 279, 766, 980, 1054
LguI GCTCTTC 1 cut(s) 1001
LmnI GCTCC 5 cut(s) 61, 529, 662, 677, 952
Lsp1109I GCAGC 3 cut(s) 25, 305, 565
LweI GCATC 3 cut(s) 689, 1093, 1130
MabI ACCWGGT 1 cut(s) 398
MaeI CTAG 2 cut(s) 206, 1058
MaeII ACGT 1 cut(s) 542
MaeIII GTNAC 4 cut(s) 143, 250, 305, 1131
MalI GATC 7 cut(s) 125, 153, 273, 281, 768, 982, 1056
MboI GATC 7 cut(s) 123, 151, 271, 279, 766, 980, 1054
MboII GAAGA 7 cut(s) 19, 121, 280, 343, 382, 547, 1018
MflI RGATCY 2 cut(s) 123, 980
MluCI AATT 3 cut(s) 690, 716, 912
Mly113I GGCGCC 1 cut(s) 636
MlyI GAGTC 2 cut(s) 500, 509
MmeI TCCRAC 1 cut(s) 622
MnlI CCTC 9 cut(s) 103, 137, 145, 207, 537, 877, 962, 986, 1037
Mph1103I ATGCAT 1 cut(s) 1108
MroXI GAANNNNTTC 2 cut(s) 81, 867
MseI TTAA 1 cut(s) 705
MslI CAYNNNNRTG 1 cut(s) 1138
MspI CCGG 4 cut(s) 15, 56, 222, 606
MspR9I CCNGG 4 cut(s) 57, 400, 606, 673
MvaI CCWGG 2 cut(s) 400, 673
MwoI GCNNNNNNNGC 4 cut(s) 188, 318, 662, 677
NarI GGCGCC 1 cut(s) 636
NciI CCSGG 2 cut(s) 57, 606
NdeII GATC 7 cut(s) 123, 151, 271, 279, 766, 980, 1054
NlaIII CATG 9 cut(s) 215, 262, 278, 329, 585, 788, 884, 1042, 1079
NlaIV GGNNCC 3 cut(s) 54, 63, 637
NmuCI GTSAC 4 cut(s) 143, 250, 305, 1131
NsiI ATGCAT 1 cut(s) 1108
NspV TTCGAA 1 cut(s) 1089
PaeR7I CTCGAG 1 cut(s) 488
PceI AGGCCT 1 cut(s) 191
PciSI GCTCTTC 1 cut(s) 1001
PcsI WCGNNNNNNNCGW 3 cut(s) 648, 846, 1059
PdmI GAANNNNTTC 2 cut(s) 81, 867
PfeI GAWTC 5 cut(s) 117, 201, 225, 741, 792
PflMI CCANNNNNTGG 2 cut(s) 736, 949
PkrI GCNGC 5 cut(s) 40, 99, 220, 320, 580
PleI GAGTC 2 cut(s) 499, 509
PluTI GGCGCC 1 cut(s) 639
PpsI GAGTC 2 cut(s) 499, 509
Psp6I CCWGG 2 cut(s) 398, 671
PspGI CCWGG 2 cut(s) 398, 671
PspN4I GGNNCC 3 cut(s) 54, 63, 637
PspPI GGNCC 3 cut(s) 53, 112, 669
PstNI CAGNNNCTG 1 cut(s) 1135
PsuI RGATCY 2 cut(s) 123, 980
RsaI GTAC 1 cut(s) 479
RsaNI GTAC 1 cut(s) 478
RseI CAYNNNNRTG 1 cut(s) 1138
SalI GTCGAC 1 cut(s) 89
SapI GCTCTTC 1 cut(s) 1001
SaqAI TTAA 1 cut(s) 705
SatI GCNGC 5 cut(s) 39, 98, 219, 319, 579
Sau3AI GATC 7 cut(s) 123, 151, 271, 279, 766, 980, 1054
Sau96I GGNCC 3 cut(s) 53, 112, 669
SchI GAGTC 2 cut(s) 500, 509
ScrFI CCNGG 4 cut(s) 57, 400, 606, 673
SexAI ACCWGGT 1 cut(s) 398
SfaNI GCATC 3 cut(s) 689, 1093, 1130
SfcI CTRYAG 1 cut(s) 823
SfoI GGCGCC 1 cut(s) 637
Sfr274I CTCGAG 1 cut(s) 488
SfuI TTCGAA 1 cut(s) 1089
SinI GGWCC 2 cut(s) 53, 112
SlaI CTCGAG 1 cut(s) 488
SmiMI CAYNNNNRTG 1 cut(s) 1138
SmlI CTYRAG 2 cut(s) 488, 530
SmoI CTYRAG 2 cut(s) 488, 530
Sse9I AATT 3 cut(s) 690, 716, 912
SseBI AGGCCT 1 cut(s) 191
SsiI CCGC 6 cut(s) 95, 98, 219, 426, 495, 813
SspDI GGCGCC 1 cut(s) 635
SspMI CTAG 2 cut(s) 206, 1058
StuI AGGCCT 1 cut(s) 191
StyD4I CCNGG 4 cut(s) 55, 398, 604, 671
StyI CCWWGG 2 cut(s) 205, 417
TaaI ACNGT 5 cut(s) 376, 386, 484, 616, 901
TaiI ACGT 1 cut(s) 545
TaqI TCGA 6 cut(s) 90, 199, 489, 967, 1053, 1089
TasI AATT 3 cut(s) 690, 716, 912
TatI WGTACW 1 cut(s) 477
TauI GCSGC 2 cut(s) 100, 221
TfiI GAWTC 5 cut(s) 117, 201, 225, 741, 792
Tru1I TTAA 1 cut(s) 705
Tru9I TTAA 1 cut(s) 705
TscAI CASTG 5 cut(s) 154, 163, 391, 906, 1140
TseFI GTSAC 4 cut(s) 143, 250, 305, 1131
TseI GCWGC 3 cut(s) 38, 318, 578
Tsp45I GTSAC 4 cut(s) 143, 250, 305, 1131
TspDTI ATGAA 8 cut(s) 192, 228, 275, 383, 395, 742, 905, 1057
TspRI CASTG 5 cut(s) 154, 163, 391, 906, 1140
Van91I CCANNNNNTGG 2 cut(s) 736, 949
VpaK11BI GGWCC 2 cut(s) 53, 112
XapI RAATTY 2 cut(s) 716, 912
XbaI TCTAGA 1 cut(s) 1057
XhoI CTCGAG 1 cut(s) 488
XmaJI CCTAGG 1 cut(s) 205
XmiI GTMKAC 1 cut(s) 90
XmnI GAANNNNTTC 2 cut(s) 81, 867
XspI CTAG 2 cut(s) 206, 1058
Zsp2I ATGCAT 1 cut(s) 1108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.