Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0005326

Physical Location & Seq

Genomic Coordinates Forward (+)

12707244 .. 12710907

Gene Structure 3664 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G132300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1188 bp

ATGGCCAATCACCAAAATTCTGCCAATGGTTGGTCCAAACCAAGTGATCAAAGAACAACCGGAAAGGTCATCACTTGCAAAGCTGCTGTTGTATGGGGTCCAGGGCAACCTTTTGTGATGGAACAAGTTCAAGTCGACCCACCTCAGAAATTGGAGGTTCGAATCAAGATCCTCTTCACCTCAATCTGTCATACTGATCTTAGTGCTTGGCAAGGAGAGAATGAAGCTCAACGAGCCTTTCCTCGAATTCTAGGCCATGAAGCTTCTGGAATTGTTGAGAGTGTGGGTGAAGGTGTCAAGGACATGAAAGAAGGGGACCGTGTGATTCCAATCTTCAATGGAGAGTGTGGAGACTGCAAATGTTGCAAGTCAGAGAAAACAAATATTTGCCACAACTTTGGGGTGAACCCCTTTAAGAAAGTGATGAACAACGATGGGACAAGTAGGTTTTCAACAAAAGATGGAAAACCCATTTACCATTTTCTCAACACATCAACTTTCAGTGAGTACACAGTCCTTGAATCTGCTTGTGTGGTGAAGATTGATCCTGAGGCTCCCCTCAAGAAGATGACCATGCTCAGTTGTGGTGTTTCAACTGGAGTTGGTGCTGCATGGAACACTGCCAATGTGCAAGCTGCCTCGACAGTCGCCATCTTCGGCTTAGGTTCCGTGGGACTTGCTGTTGCTGAAGGGGCAAGAGCCAGAGGAGCATCTAAAATAATAGGCGTTGACATTAACCCCGACAAATTCATCAAAGGTCAAGCAATGGGAGTGACAGATTTCATAAATCCAGATGAACCCGGAAAGCCTTTGCATGAGAGGATCAGAGAAATAACAGATGGTGGAGTGGACTATAGCTTTGAGTGTATAGGGAACTTGGATGTTCTGAGAGAGGCCTTTCTGTCCACACATGAGGGGTGGGGGTTTACTGTGGTTTTGGGAATTCATCCAACCCCAAAAATGCTCCCTCTCCATCCAATGGAGTTGTTTCATGGTCGAGGAATTATTGGATCTGTGTTTGGAGGCTTCAAAGGGAAGTCCCAACTCCCTCATTTTGCACAAGAATGCATGCATGGGGTTGTGGATTTGGATAAGTTCATAACGCACGAGCTTCCCTTTGAGAAGATAAACGATGCATTTCAGTTGCTCATTGAAGGCAAGTCGCTGAGATGCGTTTTACAGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00010 ko00071 ko00350 ko00625 ko00626 ko00830 ko00980 ko00982 ko01100 ko01110 ko01120 ko01130 ko01220 map00010 map00071 map00350 map00625 map00626 map00830 map00980 map00982 map01100 map01110 map01120 map01130 map01220

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

396

Amino Acids

42.99

Weight (kDa)

6.36

Isoelectric Point (pI)

22.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005326)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32780 AT1G64710 AT1G64710 AT1G64710
fragaria_vesca	FvH4_5g10640 FvH4_5g10640 FvH4_5g10640
malus_domestica	MD06G1121600.v1.1
prunus_persica	Prupe.5G132300_v2.0.a1
pyrus_communis	pycom06g11270
rosa_chinensis	RchiOBHm_Chr7g0187491 RchiOBHm_Chr7g0187501
rosa_laevigata	RLG00000004776 RLG00000004777
rosa_multiflora	Rmu_sc0001230.1_g000002 Rmu_sc0019127.1_g000001
rosa_roxburghii	Rroxscaffold_3G00267380 Rroxscaffold_3G00267390
rosa_rugosa	Rorug06G0482000
rosa_samantha	Rh7AG086500 Rh7AG086700 Rh7BG088100 Rh7BG088200 Rh7CG087400 Rh7CG087500 Rh7DG089000 Rh7DG089100
rosa_wichuraiana	Rw7G007630 Rw7G007650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	30, 979
AccI	GTMKAC	1 cut(s)	135
AclWI	GGATC	4 cut(s)	163, 539, 830, 1018
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	4 cut(s)	16, 246, 746, 942
AcuI	CTGAAG	1 cut(s)	708
AfaI	GTAC	1 cut(s)	509
AfiI	CCNNNNNNNGG	2 cut(s)	30, 979
AgsI	TTSAA	7 cut(s)	131, 337, 453, 521, 594, 1030, 1154
AjnI	CCWGG	1 cut(s)	100
AluBI	AGCT	7 cut(s)	83, 227, 263, 635, 858, 1111, 1183
AluI	AGCT	7 cut(s)	83, 227, 263, 635, 858, 1111, 1183
Alw26I	GTCTC	1 cut(s)	345
AlwI	GGATC	4 cut(s)	163, 539, 830, 1018
AoxI	GGCC	3 cut(s)	3, 253, 894
ApeKI	GCWGC	3 cut(s)	83, 608, 635
ApoI	RAATTY	4 cut(s)	16, 246, 746, 942
ArsI	GACNNNNNNTTYG	2 cut(s)	842, 874
Asp700I	GAANNNNTTC	1 cut(s)	126
AspS9I	GGNCC	3 cut(s)	33, 98, 316
AsuC2I	CCSGG	1 cut(s)	801
AsuHPI	GGTGA	4 cut(s)	169, 299, 415, 547
AsuII	TTCGAA	1 cut(s)	160
AvaII	GGWCC	3 cut(s)	33, 98, 316
AxyI	CCTNAGG	1 cut(s)	549
BalI	TGGCCA	1 cut(s)	5
BauI	CACGAG	1 cut(s)	1106
BbvI	GCAGC	3 cut(s)	70, 595, 622
BccI	CCATC	6 cut(s)	112, 428, 455, 659, 833, 981
BciT130I	CCWGG	1 cut(s)	102
BclI	TGATCA	1 cut(s)	46
BcnI	CCSGG	1 cut(s)	801
BcoDI	GTCTC	1 cut(s)	345
BfaI	CTAG	1 cut(s)	251
BfmI	CTRYAG	1 cut(s)	853
BisI	GCNGC	3 cut(s)	84, 609, 636
BlsI	GCNGC	3 cut(s)	85, 610, 637
Bme1390I	CCNGG	2 cut(s)	102, 801
Bme18I	GGWCC	3 cut(s)	33, 98, 316
BmgT120I	GGNCC	3 cut(s)	33, 98, 316
BmiI	GGNNCC	4 cut(s)	99, 317, 555, 667
BmrFI	CCNGG	2 cut(s)	102, 801
BmsI	GCATC	3 cut(s)	719, 1123, 1160
BpmI	CTGGAG	1 cut(s)	618
Bpu10I	CCTNAGC	1 cut(s)	661
Bpu14I	TTCGAA	1 cut(s)	160
BpuEI	CTTGAG	1 cut(s)	545
BpuMI	CCSGG	1 cut(s)	801
BsaBI	GATNNNNATC	1 cut(s)	329
BsaJI	CCNNGG	2 cut(s)	101, 669
BsaWI	WCCGGW	1 cut(s)	59
Bsc4I	CCNNNNNNNGG	2 cut(s)	30, 979
Bse1I	ACTGG	1 cut(s)	601
Bse21I	CCTNAGG	1 cut(s)	549
Bse3DI	GCAATG	1 cut(s)	771
Bse8I	GATNNNNATC	1 cut(s)	329
BseBI	CCWGG	1 cut(s)	102
BseDI	CCNNGG	2 cut(s)	101, 669
BseGI	GGATG	3 cut(s)	886, 946, 973
BseJI	GATNNNNATC	1 cut(s)	329
BseLI	CCNNNNNNNGG	2 cut(s)	30, 979
BseMI	GCAATG	1 cut(s)	771
BseMII	CTCAG	5 cut(s)	158, 540, 592, 878, 1157
BseNI	ACTGG	1 cut(s)	601
BseRI	GAGGAG	1 cut(s)	720
BseXI	GCAGC	3 cut(s)	70, 595, 622
BshFI	GGCC	3 cut(s)	5, 255, 896
BsiSI	CCGG	2 cut(s)	60, 801
BslFI	GGGAC	4 cut(s)	329, 451, 687, 1024
BslI	CCNNNNNNNGG	2 cut(s)	30, 979
BsmAI	GTCTC	1 cut(s)	345
BsmFI	GGGAC	4 cut(s)	329, 451, 687, 1024
BsmI	GAATGC	1 cut(s)	1070
BsnI	GGCC	3 cut(s)	5, 255, 896
Bsp119I	TTCGAA	1 cut(s)	160
Bsp143I	GATC	6 cut(s)	46, 168, 196, 544, 822, 1010
BspANI	GGCC	3 cut(s)	5, 255, 896
BspCNI	CTCAG	5 cut(s)	157, 541, 591, 879, 1158
BspLI	GGNNCC	4 cut(s)	99, 317, 555, 667
BspPI	GGATC	4 cut(s)	163, 539, 830, 1018
BspT104I	TTCGAA	1 cut(s)	160
BsrDI	GCAATG	1 cut(s)	771
BsrI	ACTGG	1 cut(s)	601
BssECI	CCNNGG	2 cut(s)	101, 669
BssMI	GATC	6 cut(s)	46, 168, 196, 544, 822, 1010
BssSI	CACGAG	1 cut(s)	1106
Bst2BI	CACGAG	1 cut(s)	1106
Bst2UI	CCWGG	1 cut(s)	102
Bst4CI	ACNGT	4 cut(s)	320, 514, 646, 931
Bst6I	CTCTTC	1 cut(s)	179
BstAPI	GCANNNNNTGC	1 cut(s)	363
BstBI	TTCGAA	1 cut(s)	160
BstC8I	GCNNGC	2 cut(s)	633, 1070
BstDEI	CTNAG	7 cut(s)	144, 200, 549, 578, 661, 887, 1166
BstDSI	CCRYGG	1 cut(s)	669
BstF5I	GGATG	3 cut(s)	886, 946, 973
BstKTI	GATC	6 cut(s)	49, 171, 199, 547, 825, 1013
BstMAI	GTCTC	1 cut(s)	345
BstMBI	GATC	6 cut(s)	46, 168, 196, 544, 822, 1010
BstMWI	GCNNNNNNNGC	4 cut(s)	233, 363, 692, 707
BstNI	CCWGG	1 cut(s)	102
BstNSI	RCATGY	1 cut(s)	1072
BstSCI	CCNGG	2 cut(s)	100, 799
BstSFI	CTRYAG	1 cut(s)	853
BstV1I	GCAGC	3 cut(s)	70, 595, 622
BstX2I	RGATCY	2 cut(s)	168, 1010
BstXI	CCANNNNNNTGG	1 cut(s)	398
BstYI	RGATCY	2 cut(s)	168, 1010
Bsu36I	CCTNAGG	1 cut(s)	549
BsuRI	GGCC	3 cut(s)	5, 255, 896
BtgI	CCRYGG	1 cut(s)	669
BtsCI	GGATG	3 cut(s)	886, 946, 973
BtsI	GCAGTG	1 cut(s)	618
BtsIMutI	CAGTG	2 cut(s)	508, 618
Cac8I	GCNNGC	2 cut(s)	633, 1070
Cfr13I	GGNCC	3 cut(s)	33, 98, 316
Csp6I	GTAC	1 cut(s)	508
CviAII	CATG	9 cut(s)	257, 304, 574, 612, 815, 911, 992, 1069, 1073
CviQI	GTAC	1 cut(s)	508
DdeI	CTNAG	7 cut(s)	144, 200, 549, 578, 661, 887, 1166
DpnI	GATC	6 cut(s)	48, 170, 198, 546, 824, 1012
DpnII	GATC	6 cut(s)	46, 168, 196, 544, 822, 1010
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	179
EarI	CTCTTC	1 cut(s)	179
Eco147I	AGGCCT	1 cut(s)	896
Eco47I	GGWCC	3 cut(s)	33, 98, 316
Eco57I	CTGAAG	1 cut(s)	708
Eco81I	CCTNAGG	1 cut(s)	549
EcoRI	GAATTC	2 cut(s)	246, 942
EcoRII	CCWGG	1 cut(s)	100
EcoT22I	ATGCAT	3 cut(s)	1070, 1074, 1138
FaeI	CATG	9 cut(s)	260, 307, 577, 615, 818, 914, 995, 1072, 1076
FalI	AAGNNNNNCTT	2 cut(s)	158, 190
FaqI	GGGAC	4 cut(s)	329, 451, 687, 1024
FatI	CATG	9 cut(s)	256, 303, 573, 611, 814, 910, 991, 1068, 1072
FbaI	TGATCA	1 cut(s)	46
FblI	GTMKAC	1 cut(s)	135
Fnu4HI	GCNGC	3 cut(s)	84, 609, 636
FokI	GGATG	3 cut(s)	893, 933, 960
Fsp4HI	GCNGC	3 cut(s)	84, 609, 636
FspBI	CTAG	1 cut(s)	251
GluI	GCNGC	3 cut(s)	84, 609, 636
GsuI	CTGGAG	1 cut(s)	618
HaeIII	GGCC	3 cut(s)	5, 255, 896
HapII	CCGG	2 cut(s)	60, 801
Hin1II	CATG	9 cut(s)	260, 307, 577, 615, 818, 914, 995, 1072, 1076
HincII	GTYRAC	2 cut(s)	136, 730
HindII	GTYRAC	2 cut(s)	136, 730
HindIII	AAGCTT	1 cut(s)	261
HinfI	GANTC	3 cut(s)	162, 325, 521
HpaII	CCGG	2 cut(s)	60, 801
HphI	GGTGA	4 cut(s)	169, 299, 415, 547
Hpy166II	GTNNAC	7 cut(s)	136, 406, 510, 730, 850, 906, 927
Hpy188I	TCNGA	5 cut(s)	147, 373, 827, 888, 1187
Hpy188III	TCNNGA	5 cut(s)	166, 267, 548, 562, 791
Hpy8I	GTNNAC	7 cut(s)	136, 406, 510, 730, 850, 906, 927
HpyAV	CCTTC	4 cut(s)	284, 305, 683, 1148
HpyCH4III	ACNGT	4 cut(s)	320, 514, 646, 931
HpyF10VI	GCNNNNNNNGC	4 cut(s)	233, 363, 692, 707
HpyF3I	CTNAG	7 cut(s)	144, 200, 549, 578, 661, 887, 1166
Hsp92II	CATG	9 cut(s)	260, 307, 577, 615, 818, 914, 995, 1072, 1076
Ksp22I	TGATCA	1 cut(s)	46
Kzo9I	GATC	6 cut(s)	46, 168, 196, 544, 822, 1010
LmnI	GCTCC	3 cut(s)	559, 707, 969
LpnPI	CCDG	9 cut(s)	73, 87, 114, 252, 561, 582, 715, 804, 814
Lsp1109I	GCAGC	3 cut(s)	70, 595, 622
LweI	GCATC	3 cut(s)	719, 1123, 1160
MaeI	CTAG	1 cut(s)	251
MaeIII	GTNAC	1 cut(s)	772
MalI	GATC	6 cut(s)	48, 170, 198, 546, 824, 1012
MboI	GATC	6 cut(s)	46, 168, 196, 544, 822, 1010
MboII	GAAGA	6 cut(s)	166, 325, 550, 577, 646, 1135
MflI	RGATCY	2 cut(s)	168, 1010
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	7 cut(s)	16, 149, 246, 270, 746, 942, 1002
MluNI	TGGCCA	1 cut(s)	5
MmeI	TCCRAC	1 cut(s)	974
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	3 cut(s)	1070, 1074, 1138
MroXI	GAANNNNTTC	1 cut(s)	126
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	2 cut(s)	414, 735
MslI	CAYNNNNRTG	1 cut(s)	1063
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	2 cut(s)	60, 801
MspR9I	CCNGG	2 cut(s)	102, 801
Mva1269I	GAATGC	1 cut(s)	1070
MvaI	CCWGG	1 cut(s)	102
MwoI	GCNNNNNNNGC	4 cut(s)	233, 363, 692, 707
NciI	CCSGG	1 cut(s)	801
NdeII	GATC	6 cut(s)	46, 168, 196, 544, 822, 1010
NlaIII	CATG	9 cut(s)	260, 307, 577, 615, 818, 914, 995, 1072, 1076
NlaIV	GGNNCC	4 cut(s)	99, 317, 555, 667
NmuCI	GTSAC	1 cut(s)	772
NsiI	ATGCAT	3 cut(s)	1070, 1074, 1138
NspI	RCATGY	1 cut(s)	1072
NspV	TTCGAA	1 cut(s)	160
PaeI	GCATGC	1 cut(s)	1072
PceI	AGGCCT	1 cut(s)	896
PctI	GAATGC	1 cut(s)	1070
PdmI	GAANNNNTTC	1 cut(s)	126
PfeI	GAWTC	3 cut(s)	162, 325, 521
PflMI	CCANNNNNTGG	2 cut(s)	30, 979
PkrI	GCNGC	3 cut(s)	85, 610, 637
Psp6I	CCWGG	1 cut(s)	100
PspGI	CCWGG	1 cut(s)	100
PspN4I	GGNNCC	4 cut(s)	99, 317, 555, 667
PspPI	GGNCC	3 cut(s)	33, 98, 316
PsuI	RGATCY	2 cut(s)	168, 1010
RsaI	GTAC	1 cut(s)	509
RsaNI	GTAC	1 cut(s)	508
RseI	CAYNNNNRTG	1 cut(s)	1063
SalI	GTCGAC	1 cut(s)	134
SaqAI	TTAA	2 cut(s)	414, 735
SatI	GCNGC	3 cut(s)	84, 609, 636
Sau3AI	GATC	6 cut(s)	46, 168, 196, 544, 822, 1010
Sau96I	GGNCC	3 cut(s)	33, 98, 316
ScrFI	CCNGG	2 cut(s)	102, 801
SfaNI	GCATC	3 cut(s)	719, 1123, 1160
SfcI	CTRYAG	1 cut(s)	853
SfuI	TTCGAA	1 cut(s)	160
SinI	GGWCC	3 cut(s)	33, 98, 316
SmiMI	CAYNNNNRTG	1 cut(s)	1063
SmlI	CTYRAG	1 cut(s)	560
SmoI	CTYRAG	1 cut(s)	560
SphI	GCATGC	1 cut(s)	1072
Sse9I	AATT	7 cut(s)	16, 149, 246, 270, 746, 942, 1002
SseBI	AGGCCT	1 cut(s)	896
SspI	AATATT	1 cut(s)	385
SspMI	CTAG	1 cut(s)	251
StuI	AGGCCT	1 cut(s)	896
StyD4I	CCNGG	2 cut(s)	100, 799
TaaI	ACNGT	4 cut(s)	320, 514, 646, 931
TaqI	TCGA	5 cut(s)	135, 160, 244, 641, 997
TasI	AATT	7 cut(s)	16, 149, 246, 270, 746, 942, 1002
TatI	WGTACW	1 cut(s)	507
TfiI	GAWTC	3 cut(s)	162, 325, 521
Tru1I	TTAA	2 cut(s)	414, 735
Tru9I	TTAA	2 cut(s)	414, 735
TscAI	CASTG	2 cut(s)	508, 625
TseFI	GTSAC	1 cut(s)	772
TseI	GCWGC	3 cut(s)	83, 608, 635
Tsp45I	GTSAC	1 cut(s)	772
TspGWI	ACGGA	1 cut(s)	658
TspRI	CASTG	2 cut(s)	508, 625
Van91I	CCANNNNNTGG	2 cut(s)	30, 979
VpaK11BI	GGWCC	3 cut(s)	33, 98, 316
XapI	RAATTY	4 cut(s)	16, 246, 746, 942
XceI	RCATGY	1 cut(s)	1072
XcmI	CCANNNNNNNNNTGG	1 cut(s)	263
XmiI	GTMKAC	1 cut(s)	135
XmnI	GAANNNNTTC	1 cut(s)	126
XspI	CTAG	1 cut(s)	251
Zsp2I	ATGCAT	3 cut(s)	1070, 1074, 1138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.