Rmu_sc0019127.1_g000001

Alcohol dehydrogenase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019127.1
Physical Location & Seq
Forward (+)
1 .. 1108
1108 bp
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UTR
Exon/CDS
Intron
Rmu_sc0019127.1_g000001.1.cds

Sequence Viewer

Length: 317 bp
gaaactctgatgttcttcgggaagcctttctctgcacacatgagggatggggttttactgtgatattgggaattcatgctaccccaaaaatgcttgccctccatccaatggaactgtttcatggtcgacgaattattggatctgtgtttggaggcttcaaagggaagagccaactcccccgttttgccaaagaatgcatgcgaggggtggtcgatttagacgagttcataacacatgagcttcccttcgagaagataaacgatgcgtttaagttgctcgttgaaggccagtcactgagatgcgttctgcatctgtga

Protein Analysis

104

Amino Acids

11.76

Weight (kDa)

7.18

Isoelectric Point (pI)

35.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 108
AccI GTMKAC 1 cut(s) 126
AclWI GGATC 1 cut(s) 147
AcsI RAATTY 1 cut(s) 71
AfiI CCNNNNNNNGG 1 cut(s) 108
AgsI TTSAA 2 cut(s) 159, 283
AluBI AGCT 1 cut(s) 240
AluI AGCT 1 cut(s) 240
AlwI GGATC 1 cut(s) 147
AlwNI CAGNNNCTG 1 cut(s) 294
AoxI GGCC 1 cut(s) 285
ApoI RAATTY 1 cut(s) 71
Asp700I GAANNNNTTC 2 cut(s) 26, 116
BccI CCATC 2 cut(s) 41, 110
BmsI GCATC 2 cut(s) 252, 289
Bsc4I CCNNNNNNNGG 1 cut(s) 108
Bse1I ACTGG 1 cut(s) 288
BseGI GGATG 2 cut(s) 52, 102
BseLI CCNNNNNNNGG 1 cut(s) 108
BseMII CTCAG 1 cut(s) 286
BseNI ACTGG 1 cut(s) 288
BsgI GTGCAG 1 cut(s) 18
BshFI GGCC 1 cut(s) 287
BslI CCNNNNNNNGG 1 cut(s) 108
BsmI GAATGC 1 cut(s) 199
BsnI GGCC 1 cut(s) 287
Bsp143I GATC 1 cut(s) 139
BspANI GGCC 1 cut(s) 287
BspCNI CTCAG 1 cut(s) 287
BspPI GGATC 1 cut(s) 147
BspQI GCTCTTC 1 cut(s) 160
BsrI ACTGG 1 cut(s) 288
BssMI GATC 1 cut(s) 139
Bst4CI ACNGT 2 cut(s) 60, 116
Bst6I CTCTTC 1 cut(s) 160
BstC8I GCNNGC 2 cut(s) 95, 199
BstDEI CTNAG 1 cut(s) 295
BstF5I GGATG 2 cut(s) 52, 102
BstKTI GATC 1 cut(s) 142
BstMBI GATC 1 cut(s) 139
BstNSI RCATGY 1 cut(s) 201
BstX2I RGATCY 1 cut(s) 139
BstYI RGATCY 1 cut(s) 139
BsuRI GGCC 1 cut(s) 287
BtsCI GGATG 2 cut(s) 52, 102
BtsIMutI CAGTG 1 cut(s) 292
Cac8I GCNNGC 2 cut(s) 95, 199
CaiI CAGNNNCTG 1 cut(s) 294
CviAII CATG 5 cut(s) 40, 76, 121, 198, 235
CviJI RGCY 5 cut(s) 25, 155, 170, 240, 287
CviKI_1 RGCY 5 cut(s) 25, 155, 170, 240, 287
DdeI CTNAG 1 cut(s) 295
DpnI GATC 1 cut(s) 141
DpnII GATC 1 cut(s) 139
Eam1104I CTCTTC 1 cut(s) 160
EarI CTCTTC 1 cut(s) 160
EcoRI GAATTC 1 cut(s) 71
EcoT22I ATGCAT 1 cut(s) 199
FaeI CATG 5 cut(s) 43, 79, 124, 201, 238
FaiI YATR 6 cut(s) 41, 77, 122, 199, 229, 236
FatI CATG 5 cut(s) 39, 75, 120, 197, 234
FblI GTMKAC 1 cut(s) 126
FokI GGATG 2 cut(s) 59, 89
HaeIII GGCC 1 cut(s) 287
Hin1II CATG 5 cut(s) 43, 79, 124, 201, 238
HincII GTYRAC 1 cut(s) 127
HindII GTYRAC 1 cut(s) 127
Hpy166II GTNNAC 1 cut(s) 127
Hpy188I TCNGA 1 cut(s) 9
Hpy188III TCNNGA 2 cut(s) 19, 249
Hpy8I GTNNAC 1 cut(s) 127
Hpy99I CGWCG 1 cut(s) 131
HpyAV CCTTC 2 cut(s) 255, 277
HpyCH4III ACNGT 2 cut(s) 60, 116
HpyCH4V TGCA 3 cut(s) 35, 197, 309
HpyF3I CTNAG 1 cut(s) 295
Hsp92II CATG 5 cut(s) 43, 79, 124, 201, 238
Kzo9I GATC 1 cut(s) 139
LguI GCTCTTC 1 cut(s) 160
LpnPI CCDG 1 cut(s) 301
LweI GCATC 2 cut(s) 252, 289
MaeIII GTNAC 1 cut(s) 290
MalI GATC 1 cut(s) 141
MboI GATC 1 cut(s) 139
MboII GAAGA 3 cut(s) 7, 177, 264
MflI RGATCY 1 cut(s) 139
MluCI AATT 2 cut(s) 71, 131
MnlI CCTC 4 cut(s) 36, 109, 145, 196
Mph1103I ATGCAT 1 cut(s) 199
MroXI GAANNNNTTC 2 cut(s) 26, 116
MseI TTAA 1 cut(s) 269
MslI CAYNNNNRTG 1 cut(s) 297
Mva1269I GAATGC 1 cut(s) 199
NdeII GATC 1 cut(s) 139
NlaIII CATG 5 cut(s) 43, 79, 124, 201, 238
NmuCI GTSAC 1 cut(s) 290
NsiI ATGCAT 1 cut(s) 199
NspI RCATGY 1 cut(s) 201
PaeI GCATGC 1 cut(s) 201
PciSI GCTCTTC 1 cut(s) 160
PcsI WCGNNNNNNNCGW 1 cut(s) 218
PctI GAATGC 1 cut(s) 199
PdmI GAANNNNTTC 2 cut(s) 26, 116
PflMI CCANNNNNTGG 1 cut(s) 108
PstNI CAGNNNCTG 1 cut(s) 294
PsuI RGATCY 1 cut(s) 139
RseI CAYNNNNRTG 1 cut(s) 297
SalI GTCGAC 1 cut(s) 125
SapI GCTCTTC 1 cut(s) 160
SaqAI TTAA 1 cut(s) 269
Sau3AI GATC 1 cut(s) 139
SetI ASST 1 cut(s) 242
SfaNI GCATC 2 cut(s) 252, 289
SmiMI CAYNNNNRTG 1 cut(s) 297
SphI GCATGC 1 cut(s) 201
Sse9I AATT 2 cut(s) 71, 131
TaaI ACNGT 2 cut(s) 60, 116
TaqI TCGA 3 cut(s) 126, 212, 248
TasI AATT 2 cut(s) 71, 131
Tru1I TTAA 1 cut(s) 269
Tru9I TTAA 1 cut(s) 269
TscAI CASTG 1 cut(s) 299
TseFI GTSAC 1 cut(s) 290
Tsp45I GTSAC 1 cut(s) 290
TspDTI ATGAA 3 cut(s) 64, 109, 216
TspRI CASTG 1 cut(s) 299
Van91I CCANNNNNTGG 1 cut(s) 108
XapI RAATTY 1 cut(s) 71
XceI RCATGY 1 cut(s) 201
XmiI GTMKAC 1 cut(s) 126
XmnI GAANNNNTTC 2 cut(s) 26, 116
Zsp2I ATGCAT 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.