Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001792

Physical Location & Seq

Genomic Coordinates Reverse (-)

14174798 .. 14178034

Gene Structure 3237 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G37150.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 645 bp

ATGTTGTTTCTCATTTCTTTCAGTAACTTCTCTGAGATTCCAGTTGGTTCAGTTTGTGTCTCTGATATACAACTTAAAGGTCGAGGCAGAACAAAGAATGTTTGGGAATCTCCAAAAGGTTGTCTTATGTATTCGTTTACATTAGAAATGGAAGATGGTCGAGTAGTGCCTTTGATACAGTATGTGGTGTCTCTTGCTGTTACTGAGGCAGTGAAAGATGTTTGTGACAAGAAGGGTTTGTCGTATAATGATGTTAAAATAAAGTGGCCAAATGATCTATACTTGAATGGCCTTAAGATTGGAGGCATTTTGTGTACCTCTACATATAGATCAAGGAAGTTCCTTGTCAGTGTTGGTGTGGGATTGAATGTGGACAACGAGCAACCGACCACGTGCTTAAATGCGGTACTAAAAGACGTTTGCCCTCCATCAAACCTACTTAAAAGAGAAGAAATTCTTGGTGCCTTCTTTAAGAAGTTTGAAAATTTCTTTGATCTATTCATGGAACAAGGTTTTAAATCTCTTGAGGAGCTTTACTATAGGACATGGCTTCACAGTGGACAAAGAGTGATTGCTGAAGAAAAAAACGAGGACCAAGTTGTTCAAAATGTTGTGACTATCCAGCTATTGGAGATGACAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0001101 GO:0003674 GO:0003824 GO:0004077 GO:0004078 GO:0004080 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005652 GO:0005694 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006807 GO:0006996 GO:0007584 GO:0008144 GO:0008150 GO:0008152 GO:0008283 GO:0009058 GO:0009059 GO:0009305 GO:0009374 GO:0009507 GO:0009536 GO:0009605 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0014070 GO:0016043 GO:0016363 GO:0016569 GO:0016570 GO:0016874 GO:0016879 GO:0018271 GO:0019538 GO:0019842 GO:0019899 GO:0031406 GO:0031667 GO:0031974 GO:0031981 GO:0033218 GO:0033273 GO:0033293 GO:0034399 GO:0036094 GO:0036211 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0042966 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046983 GO:0048037 GO:0050662 GO:0050896 GO:0051276 GO:0070013 GO:0070781 GO:0071110 GO:0071704 GO:0071840 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1901681 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00780 ko01100 map00780 map01100

Pfam Domains

Protein Families

BPL_C BPL_LplA_LipB

Protein Analysis

214

Amino Acids

24.33

Weight (kDa)

5.6

Isoelectric Point (pI)

28.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BPL_LplA_LipB	PF03099	80 - 206	3e-36	Biotin/lipoate A/B protein ligase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001792)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT2G25710 AT2G25710 AT2G25710 AT2G25710 AT2G25710 AT2G25710 AT2G25710 AT2G25710
fragaria_vesca	FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_5g31361
malus_domestica	MD08G1169900.v1.1 MD15G1356700.v1.1
prunus_persica	Prupe.1G503900_v2.0.a1 Prupe.1G503900_v2.0.a1 Prupe.1G503900_v2.0.a1
pyrus_communis	pycom08g14530 pycom15g31890
rosa_chinensis	RchiOBHm_Chr6g0294871
rosa_laevigata	RLG00000011835
rosa_multiflora	Rmu_co8434131.1_g000001 Rmu_sc0008966.1_g000013 Rmu_sc0021726.1_g000002
rosa_roxburghii	Rroxscaffold_7G00172940
rosa_rugosa	Rorug06G0247400 Rorug06G0247500 Rorug06G0247600
rosa_samantha	Rh6AG361000 Rh6BG367600 Rh6CG374800 Rh6DG361500
rosa_wichuraiana	Rw6G031490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	461
AccB7I	CCANNNNNTGG	1 cut(s)	628
AciI	CCGC	1 cut(s)	404
AcoI	YGGCCR	1 cut(s)	266
AcsI	RAATTY	2 cut(s)	453, 484
AcuI	CTGAAG	1 cut(s)	597
AcvI	CACGTG	1 cut(s)	393
AfaI	GTAC	2 cut(s)	316, 408
AfiI	CCNNNNNNNGG	1 cut(s)	628
AflII	CTTAAG	1 cut(s)	293
AgsI	TTSAA	4 cut(s)	286, 367, 482, 605
AjuI	GAANNNNNNNTTGG	2 cut(s)	441, 473
AluBI	AGCT	2 cut(s)	532, 625
AluI	AGCT	2 cut(s)	532, 625
Alw26I	GTCTC	2 cut(s)	64, 195
AoxI	GGCC	2 cut(s)	266, 289
ApoI	RAATTY	2 cut(s)	453, 484
Asp700I	GAANNNNTTC	1 cut(s)	453
AspS9I	GGNCC	1 cut(s)	592
AvaII	GGWCC	1 cut(s)	592
BalI	TGGCCA	1 cut(s)	268
BanI	GGYRCC	1 cut(s)	461
BbrPI	CACGTG	1 cut(s)	393
BccI	CCATC	2 cut(s)	149, 436
BcoDI	GTCTC	2 cut(s)	64, 195
BfmI	CTRYAG	1 cut(s)	538
BfrI	CTTAAG	1 cut(s)	293
Bme18I	GGWCC	1 cut(s)	592
BmgT120I	GGNCC	1 cut(s)	592
BmiI	GGNNCC	1 cut(s)	463
BpuEI	CTTGAG	1 cut(s)	545
BsaAI	YACGTR	1 cut(s)	393
Bsc4I	CCNNNNNNNGG	1 cut(s)	628
Bse1I	ACTGG	1 cut(s)	41
BseLI	CCNNNNNNNGG	1 cut(s)	628
BseMII	CTCAG	2 cut(s)	24, 195
BseNI	ACTGG	1 cut(s)	41
BseRI	GAGGAG	1 cut(s)	542
BshFI	GGCC	2 cut(s)	268, 291
BshNI	GGYRCC	1 cut(s)	461
BslI	CCNNNNNNNGG	1 cut(s)	628
BsmAI	GTCTC	2 cut(s)	64, 195
BsnI	GGCC	2 cut(s)	268, 291
Bsp143I	GATC	3 cut(s)	274, 329, 493
BspACI	CCGC	1 cut(s)	404
BspANI	GGCC	2 cut(s)	268, 291
BspCNI	CTCAG	2 cut(s)	25, 196
BspLI	GGNNCC	1 cut(s)	463
BspT107I	GGYRCC	1 cut(s)	461
BspTI	CTTAAG	1 cut(s)	293
BsrI	ACTGG	1 cut(s)	41
BssMI	GATC	3 cut(s)	274, 329, 493
Bst4CI	ACNGT	2 cut(s)	180, 557
BstAFI	CTTAAG	1 cut(s)	293
BstBAI	YACGTR	1 cut(s)	393
BstDEI	CTNAG	2 cut(s)	33, 204
BstKTI	GATC	3 cut(s)	277, 332, 496
BstMAI	GTCTC	2 cut(s)	64, 195
BstMBI	GATC	3 cut(s)	274, 329, 493
BstSFI	CTRYAG	1 cut(s)	538
BsuRI	GGCC	2 cut(s)	268, 291
BtsI	GCAGTG	1 cut(s)	216
BtsIMutI	CAGTG	3 cut(s)	216, 355, 562
Cfr13I	GGNCC	1 cut(s)	592
Csp6I	GTAC	2 cut(s)	315, 407
CviAII	CATG	2 cut(s)	502, 546
CviJI	RGCY	5 cut(s)	268, 291, 532, 550, 625
CviKI_1	RGCY	5 cut(s)	268, 291, 532, 550, 625
CviQI	GTAC	2 cut(s)	315, 407
DdeI	CTNAG	2 cut(s)	33, 204
DpnI	GATC	3 cut(s)	276, 331, 495
DpnII	GATC	3 cut(s)	274, 329, 493
DraI	TTTAAA	1 cut(s)	517
EaeI	YGGCCR	1 cut(s)	266
Eco47I	GGWCC	1 cut(s)	592
Eco57I	CTGAAG	1 cut(s)	597
Eco72I	CACGTG	1 cut(s)	393
FaeI	CATG	2 cut(s)	505, 549
FalI	AAGNNNNNCTT	4 cut(s)	108, 140, 441, 473
FatI	CATG	2 cut(s)	501, 545
HaeIII	GGCC	2 cut(s)	268, 291
Hin1II	CATG	2 cut(s)	505, 549
HinfI	GANTC	2 cut(s)	37, 107
Hpy166II	GTNNAC	4 cut(s)	138, 315, 373, 560
Hpy188I	TCNGA	2 cut(s)	34, 64
Hpy188III	TCNNGA	1 cut(s)	524
Hpy8I	GTNNAC	4 cut(s)	138, 315, 373, 560
HpyAV	CCTTC	2 cut(s)	226, 475
HpyCH4III	ACNGT	2 cut(s)	180, 557
HpyCH4IV	ACGT	2 cut(s)	392, 417
HpyF3I	CTNAG	2 cut(s)	33, 204
HpySE526I	ACGT	2 cut(s)	392, 417
Hsp92II	CATG	2 cut(s)	505, 549
Kzo9I	GATC	3 cut(s)	274, 329, 493
LmnI	GCTCC	1 cut(s)	529
LpnPI	CCDG	2 cut(s)	54, 635
MaeII	ACGT	2 cut(s)	392, 417
MaeIII	GTNAC	4 cut(s)	23, 199, 224, 613
MalI	GATC	3 cut(s)	276, 331, 495
MboI	GATC	3 cut(s)	274, 329, 493
MboII	GAAGA	3 cut(s)	164, 461, 590
MlsI	TGGCCA	1 cut(s)	268
MluCI	AATT	2 cut(s)	453, 484
MluNI	TGGCCA	1 cut(s)	268
MnlI	CCTC	7 cut(s)	77, 199, 296, 328, 435, 520, 583
Mox20I	TGGCCA	1 cut(s)	268
MroXI	GAANNNNTTC	1 cut(s)	453
MscI	TGGCCA	1 cut(s)	268
MseI	TTAA	7 cut(s)	75, 255, 294, 398, 441, 471, 516
Msp20I	TGGCCA	1 cut(s)	268
MspCI	CTTAAG	1 cut(s)	293
NdeII	GATC	3 cut(s)	274, 329, 493
NlaIII	CATG	2 cut(s)	505, 549
NlaIV	GGNNCC	1 cut(s)	463
NmuCI	GTSAC	2 cut(s)	224, 613
PdmI	GAANNNNTTC	1 cut(s)	453
PfeI	GAWTC	2 cut(s)	37, 107
PflMI	CCANNNNNTGG	1 cut(s)	628
PmaCI	CACGTG	1 cut(s)	393
PmlI	CACGTG	1 cut(s)	393
Ppu21I	YACGTR	1 cut(s)	393
PspCI	CACGTG	1 cut(s)	393
PspN4I	GGNNCC	1 cut(s)	463
PspPI	GGNCC	1 cut(s)	592
RsaI	GTAC	2 cut(s)	316, 408
RsaNI	GTAC	2 cut(s)	315, 407
SaqAI	TTAA	7 cut(s)	75, 255, 294, 398, 441, 471, 516
Sau3AI	GATC	3 cut(s)	274, 329, 493
Sau96I	GGNCC	1 cut(s)	592
SetI	ASST	9 cut(s)	82, 121, 320, 395, 420, 438, 514, 534, 627
SfcI	CTRYAG	1 cut(s)	538
SinI	GGWCC	1 cut(s)	592
SmlI	CTYRAG	2 cut(s)	293, 524
SmoI	CTYRAG	2 cut(s)	293, 524
Sse9I	AATT	2 cut(s)	453, 484
SsiI	CCGC	1 cut(s)	404
TaaI	ACNGT	2 cut(s)	180, 557
TaiI	ACGT	2 cut(s)	395, 420
TaqI	TCGA	2 cut(s)	82, 160
TasI	AATT	2 cut(s)	453, 484
TfiI	GAWTC	2 cut(s)	37, 107
Tru1I	TTAA	7 cut(s)	75, 255, 294, 398, 441, 471, 516
Tru9I	TTAA	7 cut(s)	75, 255, 294, 398, 441, 471, 516
TscAI	CASTG	3 cut(s)	216, 355, 562
TseFI	GTSAC	2 cut(s)	224, 613
Tsp45I	GTSAC	2 cut(s)	224, 613
TspDTI	ATGAA	1 cut(s)	490
TspRI	CASTG	3 cut(s)	216, 355, 562
Van91I	CCANNNNNTGG	1 cut(s)	628
Vha464I	CTTAAG	1 cut(s)	293
VpaK11BI	GGWCC	1 cut(s)	592
XapI	RAATTY	2 cut(s)	453, 484
XmnI	GAANNNNTTC	1 cut(s)	453

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.