Biotin--protein ligase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT2G25710 AT2G25710 AT2G25710 AT2G25710 AT2G25710 AT2G25710 AT2G25710 AT2G25710 |
| fragaria_vesca | FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_5g31361 |
| malus_domestica | MD08G1169900.v1.1 MD15G1356700.v1.1 |
| prunus_persica | Prupe.1G503900_v2.0.a1 Prupe.1G503900_v2.0.a1 Prupe.1G503900_v2.0.a1 |
| pyrus_communis | pycom08g14530 pycom15g31890 |
| rosa_chinensis | RchiOBHm_Chr6g0294871 |
| rosa_laevigata | RLG00000011835 |
| rosa_multiflora | Rmu_co8434131.1_g000001 Rmu_sc0008966.1_g000013 Rmu_sc0021726.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00172940 |
| rosa_rugosa | Rorug06G0247400 Rorug06G0247500 Rorug06G0247600 |
| rosa_samantha | Rh6AG361000 Rh6BG367600 Rh6CG374800 Rh6DG361500 |
| rosa_wichuraiana | Rw6G031490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 129 |
| AluBI | AGCT | 2 cut(s) | 138, 202 |
| AluI | AGCT | 2 cut(s) | 138, 202 |
| Alw26I | GTCTC | 2 cut(s) | 108, 122 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 112 |
| AoxI | GGCC | 1 cut(s) | 129 |
| ApeKI | GCWGC | 1 cut(s) | 88 |
| BbvI | GCAGC | 1 cut(s) | 75 |
| BcoDI | GTCTC | 2 cut(s) | 108, 122 |
| BfmI | CTRYAG | 1 cut(s) | 171 |
| BisI | GCNGC | 1 cut(s) | 89 |
| BlsI | GCNGC | 1 cut(s) | 90 |
| BmsI | GCATC | 1 cut(s) | 233 |
| Bse1I | ACTGG | 1 cut(s) | 48 |
| BseGI | GGATG | 1 cut(s) | 85 |
| BseMII | CTCAG | 3 cut(s) | 104, 119, 135 |
| BseNI | ACTGG | 1 cut(s) | 48 |
| BseX3I | CGGCCG | 1 cut(s) | 129 |
| BseXI | GCAGC | 1 cut(s) | 75 |
| Bsh1285I | CGRYCG | 1 cut(s) | 132 |
| BshFI | GGCC | 1 cut(s) | 131 |
| BsiEI | CGRYCG | 1 cut(s) | 132 |
| BsmAI | GTCTC | 2 cut(s) | 108, 122 |
| BsnI | GGCC | 1 cut(s) | 131 |
| BspANI | GGCC | 1 cut(s) | 131 |
| BspCNI | CTCAG | 3 cut(s) | 105, 118, 136 |
| BspMAI | CTGCAG | 1 cut(s) | 175 |
| BsrI | ACTGG | 1 cut(s) | 48 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 3 cut(s) | 105, 113, 144 |
| BstF5I | GGATG | 1 cut(s) | 85 |
| BstMAI | GTCTC | 2 cut(s) | 108, 122 |
| BstMCI | CGRYCG | 1 cut(s) | 132 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 97 |
| BstNSI | RCATGY | 1 cut(s) | 8 |
| BstSFI | CTRYAG | 1 cut(s) | 171 |
| BstV1I | GCAGC | 1 cut(s) | 75 |
| BstZI | CGGCCG | 1 cut(s) | 129 |
| BsuRI | GGCC | 1 cut(s) | 131 |
| BtsCI | GGATG | 1 cut(s) | 85 |
| BtsIMutI | CAGTG | 1 cut(s) | 41 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CaiI | CAGNNNCTG | 1 cut(s) | 112 |
| CviAII | CATG | 1 cut(s) | 5 |
| CviJI | RGCY | 5 cut(s) | 47, 59, 131, 138, 202 |
| CviKI_1 | RGCY | 5 cut(s) | 47, 59, 131, 138, 202 |
| DdeI | CTNAG | 3 cut(s) | 105, 113, 144 |
| EaeI | YGGCCR | 1 cut(s) | 129 |
| EagI | CGGCCG | 1 cut(s) | 129 |
| EclXI | CGGCCG | 1 cut(s) | 129 |
| Eco52I | CGGCCG | 1 cut(s) | 129 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 1 cut(s) | 8 |
| FaiI | YATR | 9 cut(s) | 6, 182, 188, 190, 192, 223, 225, 236, 268 |
| FatI | CATG | 1 cut(s) | 4 |
| Fnu4HI | GCNGC | 1 cut(s) | 89 |
| FokI | GGATG | 1 cut(s) | 92 |
| Fsp4HI | GCNGC | 1 cut(s) | 89 |
| GluI | GCNGC | 1 cut(s) | 89 |
| HaeIII | GGCC | 1 cut(s) | 131 |
| Hin1II | CATG | 1 cut(s) | 8 |
| HinfI | GANTC | 2 cut(s) | 109, 115 |
| Hpy188I | TCNGA | 3 cut(s) | 108, 114, 232 |
| HpyAV | CCTTC | 2 cut(s) | 31, 49 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 8, 173, 246 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 97 |
| HpyF3I | CTNAG | 3 cut(s) | 105, 113, 144 |
| Hsp92II | CATG | 1 cut(s) | 8 |
| LpnPI | CCDG | 3 cut(s) | 29, 192, 231 |
| Lsp1109I | GCAGC | 1 cut(s) | 75 |
| LweI | GCATC | 1 cut(s) | 233 |
| MboII | GAAGA | 2 cut(s) | 161, 250 |
| MluCI | AATT | 1 cut(s) | 152 |
| MlyI | GAGTC | 1 cut(s) | 124 |
| MnlI | CCTC | 2 cut(s) | 139, 259 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 1 cut(s) | 155 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 97 |
| NlaIII | CATG | 1 cut(s) | 8 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 8 |
| PaeI | GCATGC | 1 cut(s) | 8 |
| PfeI | GAWTC | 1 cut(s) | 109 |
| PkrI | GCNGC | 1 cut(s) | 90 |
| PleI | GAGTC | 1 cut(s) | 123 |
| PpsI | GAGTC | 1 cut(s) | 123 |
| PstI | CTGCAG | 1 cut(s) | 175 |
| PstNI | CAGNNNCTG | 1 cut(s) | 112 |
| SaqAI | TTAA | 1 cut(s) | 155 |
| SatI | GCNGC | 1 cut(s) | 89 |
| SchI | GAGTC | 1 cut(s) | 124 |
| SetI | ASST | 4 cut(s) | 140, 204, 251, 273 |
| SfaNI | GCATC | 1 cut(s) | 233 |
| SfcI | CTRYAG | 1 cut(s) | 171 |
| SgeI | CNNG | 5 cut(s) | 17, 56, 60, 219, 230 |
| SphI | GCATGC | 1 cut(s) | 8 |
| Sse9I | AATT | 1 cut(s) | 152 |
| TasI | AATT | 1 cut(s) | 152 |
| TfiI | GAWTC | 1 cut(s) | 109 |
| Tru1I | TTAA | 1 cut(s) | 155 |
| Tru9I | TTAA | 1 cut(s) | 155 |
| TscAI | CASTG | 1 cut(s) | 48 |
| TseI | GCWGC | 1 cut(s) | 88 |
| TspDTI | ATGAA | 1 cut(s) | 96 |
| TspRI | CASTG | 1 cut(s) | 48 |
| XceI | RCATGY | 1 cut(s) | 8 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |