Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001792

Physical Location & Seq

Genomic Coordinates Forward (+)

41651876 .. 41657245

Gene Structure 5370 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G503900.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1233 bp

ATGTCCTACGCCTTCACTAGGTCACTAGGGTTTTTCTCCGCACTCAAGAAGGTCATTTTATCAACAAAGAAAACGAATAGCAGCCTCCCTCTACCGTTTGCTGTTTCAGCTATGGATGGTAATTCAAGTTGCGCGTTGGTGTTATGCGGAAAATCATCGGCAGAGAATGAAACTGCCAAAACGCTGAAGAACAGTGGCGCTCTGAAGCTCACTGACAACACTGAGCTTTCAATTCTTCTGCACTCTGAATCGGCAAAACCGATCAAGGAAGACGCTTTTGGGGTGGATTCGTTTATGAACTCTCTCTCAACCAATCGGTTCGGAAGGTTCCTCCTTTGGTCTCCACGCTTGCCTTCAACGCACGACGTCATCTCCCAGAATTTCTGTGAGCTTCCTATCGGTGCAGTTTGTGTAGCTGATGTTCAGTACAAAGGGCGAGGCCGGTCGAAGAATGTGTGGGAGTCTCCCAAGGGTTGCCTTCTCTTTTCCTTTACTTTGCAGATGGAGGATGGCCGAGTCGTGCCTCTTATACAATACGTGGTGTCTCTTGCTGTCACGGAGGCAATAAAGGATGTTTGTGATAAAAATGGCTTGCCATATGTTGATGTTAAAATAAAATGGCCAAATGATCTTTATTTAAATGGCCTCAAAGTGGGAGGTATTTTATGCACCTCGACATTTAAATCAAAGCAGTTCAATGTCTCTGCTGGTATAGGTTTGAATGTTGATAATGAGAAACCAACTACATGCTTGAATACATTTCTTAGAGAATTGTCTGTTACGACATACCAGTTTAGAAGAGAAGATATTCTTGCCGCCTTCTTCGACAAATTTGAGAAATTTTATGAGCTTTTTATAAATCAAGGATTCCAATCTCTTGAGGAGCTATACTATAAGACGTGGCTACACAGCGGACAGAGGGTTATTGTGCAAGAAAAGAATGACGATCAAGTTGTGGAAAACGTGGTCACTATTCAGGTTTGGCAAACTAGAAAGTTGCTAGATGAGTTACTGACTCAGAGTTTGAATATTCATGCCTATGTACACGAAAGAGTTTGTACCCTTTCTTATGATATAAACCCAACGAAAATCTGTTATTTTATCCTTTCTGGTTCAGACAGGAATTTAAGGGTTACCTTTATGGATAAAATTTTGGGTCTTGTGTTCATAAAAGATATGCCCCTTTCCCTTGATATACAGAAGTTAAAGAACGTGTTCAGTAAAAATGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0001101 GO:0003674 GO:0003824 GO:0004077 GO:0004078 GO:0004080 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005652 GO:0005694 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006807 GO:0006996 GO:0007584 GO:0008144 GO:0008150 GO:0008152 GO:0008283 GO:0009058 GO:0009059 GO:0009305 GO:0009374 GO:0009507 GO:0009536 GO:0009605 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0014070 GO:0016043 GO:0016363 GO:0016569 GO:0016570 GO:0016874 GO:0016879 GO:0018271 GO:0019538 GO:0019842 GO:0019899 GO:0031406 GO:0031667 GO:0031974 GO:0031981 GO:0033218 GO:0033273 GO:0033293 GO:0034399 GO:0036094 GO:0036211 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0042966 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046983 GO:0048037 GO:0050662 GO:0050896 GO:0051276 GO:0070013 GO:0070781 GO:0071110 GO:0071704 GO:0071840 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1901681 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00780 ko01100 map00780 map01100

Pfam Domains

Protein Families

BPL_C BPL_LplA_LipB

Protein Analysis

411

Amino Acids

46.2

Weight (kDa)

8.54

Isoelectric Point (pI)

32.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001792)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT1G37150 AT2G25710 AT2G25710 AT2G25710 AT2G25710 AT2G25710 AT2G25710 AT2G25710 AT2G25710
fragaria_vesca	FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_2g26260 FvH4_5g31361
malus_domestica	MD08G1169900.v1.1 MD15G1356700.v1.1
prunus_persica	Prupe.1G503900_v2.0.a1 Prupe.1G503900_v2.0.a1 Prupe.1G503900_v2.0.a1
pyrus_communis	pycom08g14530 pycom15g31890
rosa_chinensis	RchiOBHm_Chr6g0294871
rosa_laevigata	RLG00000011835
rosa_multiflora	Rmu_co8434131.1_g000001 Rmu_sc0008966.1_g000013 Rmu_sc0021726.1_g000002
rosa_roxburghii	Rroxscaffold_7G00172940
rosa_rugosa	Rorug06G0247400 Rorug06G0247500 Rorug06G0247600
rosa_samantha	Rh6AG361000 Rh6BG367600 Rh6CG374800 Rh6DG361500
rosa_wichuraiana	Rw6G031490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	857
AatII	GACGTC	1 cut(s)	369
AccII	CGCG	1 cut(s)	134
AciI	CCGC	4 cut(s)	39, 147, 816, 912
AcoI	YGGCCR	2 cut(s)	511, 620
AcsI	RAATTY	5 cut(s)	379, 830, 839, 1123, 1149
AcuI	CTGAAG	2 cut(s)	206, 224
AcyI	GRCGYC	1 cut(s)	366
AfaI	GTAC	3 cut(s)	428, 1044, 1060
AfiI	CCNNNNNNNGG	2 cut(s)	18, 652
AflIII	ACRYGT	1 cut(s)	1212
AgsI	TTSAA	7 cut(s)	126, 231, 357, 697, 721, 754, 1027
AjiI	CACGTC	1 cut(s)	900
AjuI	GAANNNNNNNTTGG	2 cut(s)	261, 293
AluBI	AGCT	7 cut(s)	110, 208, 226, 391, 416, 850, 886
AluI	AGCT	7 cut(s)	110, 208, 226, 391, 416, 850, 886
Alw26I	GTCTC	4 cut(s)	345, 468, 549, 706
AoxI	GGCC	4 cut(s)	439, 511, 620, 643
ApeKI	GCWGC	1 cut(s)	81
ApoI	RAATTY	5 cut(s)	379, 830, 839, 1123, 1149
ArsI	GACNNNNNNTTYG	2 cut(s)	1006, 1038
Asp700I	GAANNNNTTC	2 cut(s)	807, 1214
AspLEI	GCGC	2 cut(s)	134, 200
BalI	TGGCCA	1 cut(s)	622
BbsI	GAAGAC	1 cut(s)	276
BbvI	GCAGC	1 cut(s)	93
BccI	CCATC	3 cut(s)	110, 496, 503
BcoDI	GTCTC	4 cut(s)	345, 468, 549, 706
BfaI	CTAG	4 cut(s)	18, 26, 990, 1001
BfoI	RGCGCY	1 cut(s)	201
BisI	GCNGC	2 cut(s)	82, 816
BlsI	GCNGC	2 cut(s)	83, 817
BmgBI	CACGTC	1 cut(s)	900
BmiI	GGNNCC	1 cut(s)	329
BpiI	GAAGAC	1 cut(s)	276
BpuEI	CTTGAG	2 cut(s)	29, 899
BsaAI	YACGTR	1 cut(s)	538
BsaBI	GATNNNNATC	1 cut(s)	871
BsaHI	GRCGYC	1 cut(s)	366
BsaI	GGTCTC	1 cut(s)	345
BsaJI	CCNNGG	1 cut(s)	468
BsaXI	ACNNNNNCTCC	2 cut(s)	356, 386
Bsc4I	CCNNNNNNNGG	2 cut(s)	18, 652
Bse118I	RCCGGY	1 cut(s)	441
Bse1I	ACTGG	1 cut(s)	790
Bse8I	GATNNNNATC	1 cut(s)	871
BseDI	CCNNGG	1 cut(s)	468
BseGI	GGATG	3 cut(s)	121, 514, 577
BseJI	GATNNNNATC	1 cut(s)	871
BseLI	CCNNNNNNNGG	2 cut(s)	18, 652
BseMII	CTCAG	2 cut(s)	213, 1031
BseNI	ACTGG	1 cut(s)	790
BseRI	GAGGAG	1 cut(s)	896
BseXI	GCAGC	1 cut(s)	93
BsgI	GTGCAG	2 cut(s)	224, 423
Bsh1236I	CGCG	1 cut(s)	134
Bsh1285I	CGRYCG	1 cut(s)	446
BshFI	GGCC	4 cut(s)	441, 513, 622, 645
BsiEI	CGRYCG	1 cut(s)	446
BsiSI	CCGG	1 cut(s)	442
BslI	CCNNNNNNNGG	2 cut(s)	18, 652
BsmAI	GTCTC	4 cut(s)	345, 468, 549, 706
BsnI	GGCC	4 cut(s)	441, 513, 622, 645
Bso31I	GGTCTC	1 cut(s)	345
Bsp1407I	TGTACA	1 cut(s)	1042
Bsp143I	GATC	3 cut(s)	261, 628, 946
BspACI	CCGC	4 cut(s)	39, 147, 816, 912
BspANI	GGCC	4 cut(s)	441, 513, 622, 645
BspCNI	CTCAG	2 cut(s)	214, 1030
BspFNI	CGCG	1 cut(s)	134
BspLI	GGNNCC	1 cut(s)	329
BspTNI	GGTCTC	1 cut(s)	345
BsrFI	RCCGGY	1 cut(s)	441
BsrGI	TGTACA	1 cut(s)	1042
BsrI	ACTGG	1 cut(s)	790
BssAI	RCCGGY	1 cut(s)	441
BssECI	CCNNGG	1 cut(s)	468
BssMI	GATC	3 cut(s)	261, 628, 946
BssNI	GRCGYC	1 cut(s)	366
BssT1I	CCWWGG	1 cut(s)	468
Bst4CI	ACNGT	2 cut(s)	96, 194
Bst6I	CTCTTC	1 cut(s)	793
BstACI	GRCGYC	1 cut(s)	366
BstAUI	TGTACA	1 cut(s)	1042
BstBAI	YACGTR	1 cut(s)	538
BstC8I	GCNNGC	2 cut(s)	350, 593
BstDEI	CTNAG	3 cut(s)	222, 764, 1017
BstEII	GGTNACC	1 cut(s)	1132
BstENI	CCTNNNNNAGG	1 cut(s)	16
BstF5I	GGATG	3 cut(s)	121, 514, 577
BstFNI	CGCG	1 cut(s)	134
BstH2I	RGCGCY	1 cut(s)	201
BstHHI	GCGC	2 cut(s)	134, 200
BstKTI	GATC	3 cut(s)	264, 631, 949
BstMAI	GTCTC	4 cut(s)	345, 468, 549, 706
BstMBI	GATC	3 cut(s)	261, 628, 946
BstMCI	CGRYCG	1 cut(s)	446
BstMWI	GCNNNNNNNGC	2 cut(s)	107, 358
BstNSI	RCATGY	1 cut(s)	750
BstPI	GGTNACC	1 cut(s)	1132
BstUI	CGCG	1 cut(s)	134
BstV1I	GCAGC	1 cut(s)	93
BstV2I	GAAGAC	1 cut(s)	276
BsuRI	GGCC	4 cut(s)	441, 513, 622, 645
BtrI	CACGTC	1 cut(s)	900
BtsCI	GGATG	3 cut(s)	121, 514, 577
BtsIMutI	CAGTG	3 cut(s)	199, 210, 219
Cac8I	GCNNGC	2 cut(s)	350, 593
CfoI	GCGC	2 cut(s)	134, 200
Cfr10I	RCCGGY	1 cut(s)	441
CseI	GACGC	1 cut(s)	281
Csp6I	GTAC	3 cut(s)	427, 1043, 1059
CviAII	CATG	2 cut(s)	747, 1034
CviQI	GTAC	3 cut(s)	427, 1043, 1059
DdeI	CTNAG	3 cut(s)	222, 764, 1017
DpnI	GATC	3 cut(s)	263, 630, 948
DpnII	GATC	3 cut(s)	261, 628, 946
DraI	TTTAAA	2 cut(s)	639, 682
EaeI	YGGCCR	2 cut(s)	511, 620
Eam1104I	CTCTTC	1 cut(s)	793
EarI	CTCTTC	1 cut(s)	793
Eco130I	CCWWGG	1 cut(s)	468
Eco31I	GGTCTC	1 cut(s)	345
Eco57I	CTGAAG	2 cut(s)	206, 224
Eco91I	GGTNACC	1 cut(s)	1132
EcoNI	CCTNNNNNAGG	1 cut(s)	16
EcoO65I	GGTNACC	1 cut(s)	1132
EcoT14I	CCWWGG	1 cut(s)	468
ErhI	CCWWGG	1 cut(s)	468
FaeI	CATG	2 cut(s)	750, 1037
FalI	AAGNNNNNCTT	2 cut(s)	795, 827
FatI	CATG	2 cut(s)	746, 1033
FauNDI	CATATG	1 cut(s)	598
Fnu4HI	GCNGC	2 cut(s)	82, 816
FokI	GGATG	3 cut(s)	128, 521, 584
Fsp4HI	GCNGC	2 cut(s)	82, 816
FspBI	CTAG	4 cut(s)	18, 26, 990, 1001
GlaI	GCGC	2 cut(s)	133, 199
GluI	GCNGC	2 cut(s)	82, 816
HaeII	RGCGCY	1 cut(s)	201
HaeIII	GGCC	4 cut(s)	441, 513, 622, 645
HapII	CCGG	1 cut(s)	442
HgaI	GACGC	1 cut(s)	281
HhaI	GCGC	2 cut(s)	134, 200
Hin1I	GRCGYC	1 cut(s)	366
Hin1II	CATG	2 cut(s)	750, 1037
Hin6I	GCGC	2 cut(s)	132, 198
HinP1I	GCGC	2 cut(s)	132, 198
HinfI	GANTC	6 cut(s)	248, 287, 461, 516, 867, 1015
HpaII	CCGG	1 cut(s)	442
Hpy166II	GTNNAC	1 cut(s)	1045
Hpy188I	TCNGA	5 cut(s)	204, 247, 323, 1020, 1117
Hpy188III	TCNNGA	2 cut(s)	46, 878
Hpy8I	GTNNAC	1 cut(s)	1045
Hpy99I	CGWCG	1 cut(s)	368
HpyAV	CCTTC	6 cut(s)	22, 43, 318, 363, 488, 829
HpyCH4III	ACNGT	2 cut(s)	96, 194
HpyCH4IV	ACGT	5 cut(s)	366, 537, 899, 963, 1212
HpyCH4V	TGCA	5 cut(s)	241, 404, 499, 669, 931
HpyF10VI	GCNNNNNNNGC	2 cut(s)	107, 358
HpyF3I	CTNAG	3 cut(s)	222, 764, 1017
HpySE526I	ACGT	5 cut(s)	366, 537, 899, 963, 1212
Hsp92I	GRCGYC	1 cut(s)	366
Hsp92II	CATG	2 cut(s)	750, 1037
HspAI	GCGC	2 cut(s)	132, 198
Kzo9I	GATC	3 cut(s)	261, 628, 946
LmnI	GCTCC	1 cut(s)	883
LpnPI	CCDG	7 cut(s)	389, 455, 693, 803, 962, 1095, 1105
Lsp1109I	GCAGC	1 cut(s)	93
MaeI	CTAG	4 cut(s)	18, 26, 990, 1001
MaeII	ACGT	5 cut(s)	366, 537, 899, 963, 1212
MaeIII	GTNAC	6 cut(s)	21, 553, 778, 967, 1008, 1132
MalI	GATC	3 cut(s)	263, 630, 948
MboI	GATC	3 cut(s)	261, 628, 946
MboII	GAAGA	7 cut(s)	199, 227, 281, 460, 810, 814, 815
MlsI	TGGCCA	1 cut(s)	622
MluCI	AATT	8 cut(s)	121, 231, 379, 770, 830, 839, 1123, 1149
MluNI	TGGCCA	1 cut(s)	622
MlyI	GAGTC	3 cut(s)	470, 525, 1009
Mox20I	TGGCCA	1 cut(s)	622
MroXI	GAANNNNTTC	2 cut(s)	807, 1214
MscI	TGGCCA	1 cut(s)	622
MseI	TTAA	5 cut(s)	609, 638, 681, 1127, 1205
MslI	CAYNNNNRTG	1 cut(s)	1038
Msp20I	TGGCCA	1 cut(s)	622
MspA1I	CMGCKG	1 cut(s)	912
MspI	CCGG	1 cut(s)	442
MvnI	CGCG	1 cut(s)	134
MwoI	GCNNNNNNNGC	2 cut(s)	107, 358
NdeI	CATATG	1 cut(s)	598
NdeII	GATC	3 cut(s)	261, 628, 946
NlaIII	CATG	2 cut(s)	750, 1037
NlaIV	GGNNCC	1 cut(s)	329
NmeAIII	GCCGAG	1 cut(s)	539
NmuCI	GTSAC	3 cut(s)	21, 553, 967
NspI	RCATGY	1 cut(s)	750
PcsI	WCGNNNNNNNCGW	1 cut(s)	257
PdmI	GAANNNNTTC	2 cut(s)	807, 1214
PfeI	GAWTC	3 cut(s)	248, 287, 867
PkrI	GCNGC	2 cut(s)	83, 817
PleI	GAGTC	3 cut(s)	469, 524, 1009
PpsI	GAGTC	3 cut(s)	469, 524, 1009
Ppu21I	YACGTR	1 cut(s)	538
PsiI	TTATAA	1 cut(s)	857
PspEI	GGTNACC	1 cut(s)	1132
PspN4I	GGNNCC	1 cut(s)	329
PsrI	GAACNNNNNNTAC	2 cut(s)	405, 437
RsaI	GTAC	3 cut(s)	428, 1044, 1060
RsaNI	GTAC	3 cut(s)	427, 1043, 1059
RseI	CAYNNNNRTG	1 cut(s)	1038
SaqAI	TTAA	5 cut(s)	609, 638, 681, 1127, 1205
SatI	GCNGC	2 cut(s)	82, 816
Sau3AI	GATC	3 cut(s)	261, 628, 946
SchI	GAGTC	3 cut(s)	470, 525, 1009
SmiI	ATTTAAAT	2 cut(s)	639, 682
SmiMI	CAYNNNNRTG	1 cut(s)	1038
SmlI	CTYRAG	2 cut(s)	44, 878
SmoI	CTYRAG	2 cut(s)	44, 878
Sse9I	AATT	8 cut(s)	121, 231, 379, 770, 830, 839, 1123, 1149
SsiI	CCGC	4 cut(s)	39, 147, 816, 912
SspI	AATATT	1 cut(s)	1030
SspMI	CTAG	4 cut(s)	18, 26, 990, 1001
StyI	CCWWGG	1 cut(s)	468
SwaI	ATTTAAAT	2 cut(s)	639, 682
TaaI	ACNGT	2 cut(s)	96, 194
TaiI	ACGT	5 cut(s)	369, 540, 902, 966, 1215
TaqI	TCGA	3 cut(s)	446, 674, 825
TasI	AATT	8 cut(s)	121, 231, 379, 770, 830, 839, 1123, 1149
TatI	WGTACW	2 cut(s)	426, 1042
TauI	GCSGC	1 cut(s)	818
TfiI	GAWTC	3 cut(s)	248, 287, 867
Tru1I	TTAA	5 cut(s)	609, 638, 681, 1127, 1205
Tru9I	TTAA	5 cut(s)	609, 638, 681, 1127, 1205
TscAI	CASTG	3 cut(s)	199, 217, 226
TseFI	GTSAC	3 cut(s)	21, 553, 967
TseI	GCWGC	1 cut(s)	81
Tsp45I	GTSAC	3 cut(s)	21, 553, 967
TspDTI	ATGAA	4 cut(s)	183, 311, 1022, 1156
TspGWI	ACGGA	1 cut(s)	572
TspRI	CASTG	3 cut(s)	199, 217, 226
XagI	CCTNNNNNAGG	1 cut(s)	16
XapI	RAATTY	5 cut(s)	379, 830, 839, 1123, 1149
XceI	RCATGY	1 cut(s)	750
XmnI	GAANNNNTTC	2 cut(s)	807, 1214
XspI	CTAG	4 cut(s)	18, 26, 990, 1001
ZraI	GACGTC	1 cut(s)	367

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.