Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009119

Physical Location & Seq

Genomic Coordinates Forward (+)

18264944 .. 18267270

Gene Structure 2327 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G49350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1137 bp

ATGGAACCGGTTATAATCGGTGCGCTGATTTTGGATGTTCACGCCAAGCCTTCGACCACACCAATCTCAGGAACCACTGTCCCTGGCCAGGTCTTATTTGCGCCGGGTGGTGTAGCAAGAAATGTAGCTGATTGCATCTTCAAGCTTGGAATTACACCTTTTATGATTGGTACTTTAGGGCTTGATGGTCCAGCCAATGTTTTATTGAAAGAGTGGAAGCTCTCTATGAAAGGAATCTTGAGACGTGAAGACATTAGTACTCCCATTGTGTCCCTTGTATATGACACTAATGGAGAAGTTGCCGCTGGTGTTGCTGGCGTGGATGCCGTTGAAAATTTTTTAACACCTGAGTGGATCCAGCGGTTTGAATACAACATAAGCTCTGCTCGTCTTCTTATGGTAGATGCAAATCTTAGCTCTCTTGCTTTGGAAGCATCTTGCAAATTGGCTGCAGAGTCCAGTGTTCCTGTATGGTTTGAGCCAGTGTCAGTCACTAAGTCACAGAGGATCGCCTCAATTGCCAAGTATGTAACAATAGTGTCCCCAAACCAAGACGAACTCATAGCAATGGCAAACGCTCTCTGCGCCAAGAATTTGTTTCATCCCTTTAGATCAGACGAAAATAAGCTTTCTATTGAAGATATGTTCCGTGCACTAAAGCCAGCTATTTTGGTTCTCCTTAAAAATGGTGTTAAAGTAGTTATCGTAACTCTCGGCTCCAATGGAGCTCTCCTATGTTCCAAGGGAAACCCGAAAAAGGCTCTGAACATAGACAGAAAGTTTCTAAGAAGTGGAGAGGTCTTCAAAAGAGTACAGTCTGTATGTTCACCAAACCGGTTTTCTGAATTGGGATCGAATCGCAGCCCGAGTCTTTTCGCAATGCATTTCCCAACCATCCCAGCCAAAGTCAAGAAGCTGACTGGTGCAGGTGATTGTCTGGTAGGCGGGACAGTTGCATCGCTAAGCGATGGGTTAGATCTAATCCAGAGTTTAGCGGTTGGCATTGCGTCGGCGAAAGCAGCGGTTGAGTCAGATGATAATGTGCCTCCTGAGTTCAAGTTGGATCTTATATCTGGTGATGCAGAGTTGGTATACAATGGCGCTAAGATGTTGATGGTTCACCAGTCGATGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MaoC_dehydratas PfkB

Protein Analysis

378

Amino Acids

40.32

Weight (kDa)

7.58

Isoelectric Point (pI)

34.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PfkB	PF00294	5 - 251	5.9e-17	pfkB family carbohydrate kinase
PfkB	PF00294	294 - 344	4.8e-07	pfkB family carbohydrate kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49350
fragaria_vesca	FvH4_2g08380
malus_domestica	MD10G1080400.v1.1
prunus_persica	Prupe.8G101700_v2.0.a1 Prupe.8G101700_v2.0.a1
pyrus_communis	pycom10g06360
rosa_chinensis	RchiOBHm_Chr6g0263461
rosa_laevigata	RLG00000014333 RLG00000014340
rosa_multiflora	Rmu_sc0000565.1_g000042 Rmu_sc0003785.1_g000022
rosa_roxburghii	Rroxscaffold_176G00431090 Rroxscaffold_176G00431100 Rroxscaffold_7G00204170 Rroxscaffold_7G00204180
rosa_rugosa	Rorug06G0005100
rosa_samantha	Rh6AG124600 Rh6BG120700 Rh6CG118900 Rh6DG107200
rosa_wichuraiana	Rw6G010690 Rw6G010840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	14
AarI	CACCTGC	1 cut(s)	917
Acc36I	ACCTGC	1 cut(s)	917
AccI	GTMKAC	1 cut(s)	1092
AciI	CCGC	5 cut(s)	303, 361, 945, 995, 1022
AclWI	GGATC	5 cut(s)	349, 362, 515, 859, 1071
AcoI	YGGCCR	1 cut(s)	85
AcsI	RAATTY	2 cut(s)	334, 592
AfaI	GTAC	3 cut(s)	172, 259, 813
AfiI	CCNNNNNNNGG	3 cut(s)	68, 88, 757
AgeI	ACCGGT	2 cut(s)	7, 834
AgsI	TTSAA	7 cut(s)	142, 208, 332, 368, 638, 805, 1057
AjiI	CACGTC	1 cut(s)	245
AjnI	CCWGG	2 cut(s)	82, 87
AjuI	GAANNNNNNNTTGG	2 cut(s)	823, 855
AleI	CACNNNNGTG	1 cut(s)	349
AluBI	AGCT	9 cut(s)	128, 145, 220, 381, 417, 628, 665, 728, 916
AluI	AGCT	9 cut(s)	128, 145, 220, 381, 417, 628, 665, 728, 916
Alw21I	GWGCWC	2 cut(s)	655, 730
Alw26I	GTCTC	1 cut(s)	235
Alw44I	GTGCAC	1 cut(s)	651
AlwI	GGATC	5 cut(s)	349, 362, 515, 859, 1071
Ama87I	CYCGRG	1 cut(s)	865
AoxI	GGCC	1 cut(s)	85
ApaLI	GTGCAC	1 cut(s)	651
ApeKI	GCWGC	3 cut(s)	449, 861, 1019
ApoI	RAATTY	2 cut(s)	334, 592
AsiGI	ACCGGT	2 cut(s)	7, 834
AspLEI	GCGC	4 cut(s)	25, 103, 587, 1103
AspS9I	GGNCC	1 cut(s)	188
AsuC2I	CCSGG	1 cut(s)	105
AsuHPI	GGTGA	4 cut(s)	819, 941, 1088, 1112
AvaI	CYCGRG	1 cut(s)	865
AvaII	GGWCC	1 cut(s)	188
BaeGI	GKGCMC	1 cut(s)	655
BalI	TGGCCA	1 cut(s)	87
BamHI	GGATCC	1 cut(s)	354
BanII	GRGCYC	1 cut(s)	730
BbsI	GAAGAC	3 cut(s)	255, 383, 793
Bbv12I	GWGCWC	2 cut(s)	655, 730
BbvI	GCAGC	3 cut(s)	436, 873, 1031
BccI	CCATC	4 cut(s)	179, 902, 962, 1108
BceAI	ACGGC	1 cut(s)	311
BciT130I	CCWGG	2 cut(s)	84, 89
BcnI	CCSGG	1 cut(s)	105
BcoDI	GTCTC	1 cut(s)	235
BfmI	CTRYAG	1 cut(s)	450
BfoI	RGCGCY	1 cut(s)	1104
BfuAI	ACCTGC	1 cut(s)	917
BglII	AGATCT	1 cut(s)	976
BisI	GCNGC	4 cut(s)	303, 450, 862, 1020
BlpI	GCTNAGC	1 cut(s)	962
BlsI	GCNGC	4 cut(s)	304, 451, 863, 1021
BmcAI	AGTACT	1 cut(s)	259
Bme1390I	CCNGG	3 cut(s)	84, 89, 105
Bme18I	GGWCC	1 cut(s)	188
BmeT110I	CYCGRG	1 cut(s)	865
BmgBI	CACGTC	1 cut(s)	245
BmgT120I	GGNCC	1 cut(s)	188
BmiI	GGNNCC	4 cut(s)	6, 73, 356, 718
BmrFI	CCNGG	3 cut(s)	84, 89, 105
BmsI	GCATC	7 cut(s)	144, 313, 394, 443, 965, 1069, 1119
BpiI	GAAGAC	3 cut(s)	255, 383, 793
Bpu1102I	GCTNAGC	1 cut(s)	962
BpuEI	CTTGAG	1 cut(s)	259
BpuMI	CCSGG	1 cut(s)	105
BsaBI	GATNNNNATC	1 cut(s)	408
BsaJI	CCNNGG	2 cut(s)	82, 741
BsaWI	WCCGGW	2 cut(s)	7, 834
Bsc4I	CCNNNNNNNGG	3 cut(s)	68, 88, 757
Bse118I	RCCGGY	2 cut(s)	7, 834
Bse1I	ACTGG	4 cut(s)	459, 482, 925, 1123
Bse3DI	GCAATG	3 cut(s)	573, 885, 1002
Bse8I	GATNNNNATC	1 cut(s)	408
BseBI	CCWGG	2 cut(s)	84, 89
BseDI	CCNNGG	2 cut(s)	82, 741
BseGI	GGATG	4 cut(s)	40, 328, 601, 894
BseJI	GATNNNNATC	1 cut(s)	408
BseLI	CCNNNNNNNGG	3 cut(s)	68, 88, 757
BseMI	GCAATG	3 cut(s)	573, 885, 1002
BseMII	CTCAG	3 cut(s)	81, 339, 1041
BseNI	ACTGG	4 cut(s)	459, 482, 925, 1123
BseSI	GKGCMC	1 cut(s)	655
BseXI	GCAGC	3 cut(s)	436, 873, 1031
BseYI	CCCAGC	1 cut(s)	898
BsgI	GTGCAG	1 cut(s)	945
BshFI	GGCC	1 cut(s)	87
BshTI	ACCGGT	2 cut(s)	7, 834
BsiHKAI	GWGCWC	2 cut(s)	655, 730
BsiHKCI	CYCGRG	1 cut(s)	865
BsiSI	CCGG	3 cut(s)	8, 104, 835
BslFI	GGGAC	4 cut(s)	65, 256, 526, 961
BslI	CCNNNNNNNGG	3 cut(s)	68, 88, 757
BsmAI	GTCTC	1 cut(s)	235
BsmBI	CGTCTC	1 cut(s)	235
BsmFI	GGGAC	4 cut(s)	65, 256, 526, 961
BsnI	GGCC	1 cut(s)	87
BsoBI	CYCGRG	1 cut(s)	865
Bsp1286I	GDGCHC	2 cut(s)	655, 730
Bsp143I	GATC	6 cut(s)	354, 507, 611, 851, 976, 1063
Bsp1720I	GCTNAGC	1 cut(s)	962
BspACI	CCGC	5 cut(s)	303, 361, 945, 995, 1022
BspANI	GGCC	1 cut(s)	87
BspCNI	CTCAG	3 cut(s)	80, 340, 1042
BspLI	GGNNCC	4 cut(s)	6, 73, 356, 718
BspMAI	CTGCAG	1 cut(s)	454
BspMI	ACCTGC	1 cut(s)	917
BspPI	GGATC	5 cut(s)	349, 362, 515, 859, 1071
BsrDI	GCAATG	3 cut(s)	573, 885, 1002
BsrFI	RCCGGY	2 cut(s)	7, 834
BsrI	ACTGG	4 cut(s)	459, 482, 925, 1123
BssAI	RCCGGY	2 cut(s)	7, 834
BssECI	CCNNGG	2 cut(s)	82, 741
BssMI	GATC	6 cut(s)	354, 507, 611, 851, 976, 1063
BssNAI	GTATAC	1 cut(s)	1093
BssT1I	CCWWGG	1 cut(s)	741
Bst1107I	GTATAC	1 cut(s)	1093
Bst2UI	CCWGG	2 cut(s)	84, 89
Bst4CI	ACNGT	3 cut(s)	79, 816, 952
BstC8I	GCNNGC	2 cut(s)	316, 663
BstDEI	CTNAG	8 cut(s)	67, 348, 413, 495, 785, 962, 1050, 1104
BstF5I	GGATG	4 cut(s)	40, 328, 601, 894
BstH2I	RGCGCY	1 cut(s)	1104
BstHHI	GCGC	4 cut(s)	25, 103, 587, 1103
BstKTI	GATC	6 cut(s)	357, 510, 614, 854, 979, 1066
BstMAI	GTCTC	1 cut(s)	235
BstMBI	GATC	6 cut(s)	354, 507, 611, 851, 976, 1063
BstMWI	GCNNNNNNNGC	5 cut(s)	311, 431, 518, 584, 1019
BstNI	CCWGG	2 cut(s)	84, 89
BstSCI	CCNGG	3 cut(s)	82, 87, 103
BstSFI	CTRYAG	1 cut(s)	450
BstSLI	GKGCMC	1 cut(s)	655
BstV1I	GCAGC	3 cut(s)	436, 873, 1031
BstV2I	GAAGAC	3 cut(s)	255, 383, 793
BstX2I	RGATCY	3 cut(s)	354, 976, 1063
BstYI	RGATCY	3 cut(s)	354, 976, 1063
BstZ17I	GTATAC	1 cut(s)	1093
BsuRI	GGCC	1 cut(s)	87
BtgZI	GCGATG	2 cut(s)	942, 981
BtrI	CACGTC	1 cut(s)	245
BtsCI	GGATG	4 cut(s)	40, 328, 601, 894
BtsIMutI	CAGTG	3 cut(s)	75, 466, 489
BveI	ACCTGC	1 cut(s)	917
Cac8I	GCNNGC	2 cut(s)	316, 663
CfoI	GCGC	4 cut(s)	25, 103, 587, 1103
Cfr10I	RCCGGY	2 cut(s)	7, 834
Cfr13I	GGNCC	1 cut(s)	188
CseI	GACGC	1 cut(s)	996
Csp6I	GTAC	3 cut(s)	171, 258, 812
CspAI	ACCGGT	2 cut(s)	7, 834
CviQI	GTAC	3 cut(s)	171, 258, 812
DdeI	CTNAG	8 cut(s)	67, 348, 413, 495, 785, 962, 1050, 1104
DpnI	GATC	6 cut(s)	356, 509, 613, 853, 978, 1065
DpnII	GATC	6 cut(s)	354, 507, 611, 851, 976, 1063
EaeI	YGGCCR	1 cut(s)	85
Ecl136II	GAGCTC	1 cut(s)	728
Eco130I	CCWWGG	1 cut(s)	741
Eco24I	GRGCYC	1 cut(s)	730
Eco47I	GGWCC	1 cut(s)	188
Eco53kI	GAGCTC	1 cut(s)	728
Eco88I	CYCGRG	1 cut(s)	865
EcoICRI	GAGCTC	1 cut(s)	728
EcoRII	CCWGG	2 cut(s)	82, 87
EcoT14I	CCWWGG	1 cut(s)	741
EcoT22I	ATGCAT	1 cut(s)	885
EcoT38I	GRGCYC	1 cut(s)	730
ErhI	CCWWGG	1 cut(s)	741
Esp3I	CGTCTC	1 cut(s)	235
FaqI	GGGAC	4 cut(s)	65, 256, 526, 961
FauI	CCCGC	1 cut(s)	938
FblI	GTMKAC	1 cut(s)	1092
Fnu4HI	GCNGC	4 cut(s)	303, 450, 862, 1020
FokI	GGATG	4 cut(s)	47, 335, 588, 881
FriOI	GRGCYC	1 cut(s)	730
Fsp4HI	GCNGC	4 cut(s)	303, 450, 862, 1020
GlaI	GCGC	4 cut(s)	24, 102, 586, 1102
GluI	GCNGC	4 cut(s)	303, 450, 862, 1020
GsaI	CCCAGC	1 cut(s)	902
HaeII	RGCGCY	1 cut(s)	1104
HaeIII	GGCC	1 cut(s)	87
HapII	CCGG	3 cut(s)	8, 104, 835
HgaI	GACGC	1 cut(s)	996
HhaI	GCGC	4 cut(s)	25, 103, 587, 1103
Hin6I	GCGC	4 cut(s)	23, 101, 585, 1101
HinP1I	GCGC	4 cut(s)	23, 101, 585, 1101
HindIII	AAGCTT	2 cut(s)	143, 626
HinfI	GANTC	5 cut(s)	234, 455, 856, 868, 1028
HpaII	CCGG	3 cut(s)	8, 104, 835
HphI	GGTGA	4 cut(s)	819, 941, 1088, 1112
Hpy166II	GTNNAC	5 cut(s)	40, 653, 827, 1093, 1120
Hpy188I	TCNGA	4 cut(s)	616, 765, 844, 1033
Hpy188III	TCNNGA	5 cut(s)	69, 238, 910, 985, 1049
Hpy8I	GTNNAC	5 cut(s)	40, 653, 827, 1093, 1120
Hpy99I	CGWCG	1 cut(s)	1012
HpyAV	CCTTC	1 cut(s)	60
HpyCH4III	ACNGT	3 cut(s)	79, 816, 952
HpyCH4IV	ACGT	1 cut(s)	244
HpyCH4V	TGCA	9 cut(s)	135, 407, 441, 452, 653, 883, 926, 956, 1082
HpyF10VI	GCNNNNNNNGC	5 cut(s)	311, 431, 518, 584, 1019
HpyF3I	CTNAG	8 cut(s)	67, 348, 413, 495, 785, 962, 1050, 1104
HpySE526I	ACGT	1 cut(s)	244
HspAI	GCGC	4 cut(s)	23, 101, 585, 1101
Kzo9I	GATC	6 cut(s)	354, 507, 611, 851, 976, 1063
LmnI	GCTCC	2 cut(s)	722, 725
Lsp1109I	GCAGC	3 cut(s)	436, 873, 1031
LweI	GCATC	7 cut(s)	144, 313, 394, 443, 965, 1069, 1119
MaeII	ACGT	1 cut(s)	244
MaeIII	GTNAC	4 cut(s)	490, 498, 529, 706
MalI	GATC	6 cut(s)	356, 509, 613, 853, 978, 1065
MboI	GATC	6 cut(s)	354, 507, 611, 851, 976, 1063
MboII	GAAGA	5 cut(s)	130, 260, 383, 650, 793
MfeI	CAATTG	1 cut(s)	516
MflI	RGATCY	3 cut(s)	354, 976, 1063
MhlI	GDGCHC	2 cut(s)	655, 730
MlsI	TGGCCA	1 cut(s)	87
MluCI	AATT	6 cut(s)	150, 334, 443, 516, 592, 845
MluNI	TGGCCA	1 cut(s)	87
MlyI	GAGTC	3 cut(s)	464, 877, 1037
MmeI	TCCRAC	1 cut(s)	1041
MnlI	CCTC	4 cut(s)	498, 523, 790, 1056
Mox20I	TGGCCA	1 cut(s)	87
Mph1103I	ATGCAT	1 cut(s)	885
MscI	TGGCCA	1 cut(s)	87
MseI	TTAA	3 cut(s)	341, 681, 693
MslI	CAYNNNNRTG	2 cut(s)	349, 566
Msp20I	TGGCCA	1 cut(s)	87
MspA1I	CMGCKG	3 cut(s)	305, 361, 1022
MspI	CCGG	3 cut(s)	8, 104, 835
MspR9I	CCNGG	3 cut(s)	84, 89, 105
MunI	CAATTG	1 cut(s)	516
MvaI	CCWGG	2 cut(s)	84, 89
MwoI	GCNNNNNNNGC	5 cut(s)	311, 431, 518, 584, 1019
NciI	CCSGG	1 cut(s)	105
NdeII	GATC	6 cut(s)	354, 507, 611, 851, 976, 1063
NlaIV	GGNNCC	4 cut(s)	6, 73, 356, 718
NmeAIII	GCCGAG	1 cut(s)	693
NmuCI	GTSAC	2 cut(s)	490, 498
NsiI	ATGCAT	1 cut(s)	885
OliI	CACNNNNGTG	1 cut(s)	349
PaqCI	CACCTGC	1 cut(s)	917
PfeI	GAWTC	2 cut(s)	234, 856
PinAI	ACCGGT	2 cut(s)	7, 834
PkrI	GCNGC	4 cut(s)	304, 451, 863, 1021
PleI	GAGTC	3 cut(s)	463, 876, 1036
PpsI	GAGTC	3 cut(s)	463, 876, 1036
PsiI	TTATAA	1 cut(s)	14
Psp124BI	GAGCTC	1 cut(s)	730
Psp6I	CCWGG	2 cut(s)	82, 87
PspFI	CCCAGC	1 cut(s)	898
PspGI	CCWGG	2 cut(s)	82, 87
PspN4I	GGNNCC	4 cut(s)	6, 73, 356, 718
PspPI	GGNCC	1 cut(s)	188
PstI	CTGCAG	1 cut(s)	454
PsuI	RGATCY	3 cut(s)	354, 976, 1063
RsaI	GTAC	3 cut(s)	172, 259, 813
RsaNI	GTAC	3 cut(s)	171, 258, 812
RseI	CAYNNNNRTG	2 cut(s)	349, 566
SacI	GAGCTC	1 cut(s)	730
SaqAI	TTAA	3 cut(s)	341, 681, 693
SatI	GCNGC	4 cut(s)	303, 450, 862, 1020
Sau3AI	GATC	6 cut(s)	354, 507, 611, 851, 976, 1063
Sau96I	GGNCC	1 cut(s)	188
ScaI	AGTACT	1 cut(s)	259
SchI	GAGTC	3 cut(s)	464, 877, 1037
ScrFI	CCNGG	3 cut(s)	84, 89, 105
SduI	GDGCHC	2 cut(s)	655, 730
SfaNI	GCATC	7 cut(s)	144, 313, 394, 443, 965, 1069, 1119
SfcI	CTRYAG	1 cut(s)	450
SinI	GGWCC	1 cut(s)	188
SmiMI	CAYNNNNRTG	2 cut(s)	349, 566
SmlI	CTYRAG	1 cut(s)	238
SmoI	CTYRAG	1 cut(s)	238
Sse9I	AATT	6 cut(s)	150, 334, 443, 516, 592, 845
SsiI	CCGC	5 cut(s)	303, 361, 945, 995, 1022
SstI	GAGCTC	1 cut(s)	730
StyD4I	CCNGG	3 cut(s)	82, 87, 103
StyI	CCWWGG	1 cut(s)	741
TaaI	ACNGT	3 cut(s)	79, 816, 952
TaiI	ACGT	1 cut(s)	247
TaqI	TCGA	3 cut(s)	53, 854, 1127
TasI	AATT	6 cut(s)	150, 334, 443, 516, 592, 845
TatI	WGTACW	2 cut(s)	257, 811
TauI	GCSGC	1 cut(s)	305
TfiI	GAWTC	2 cut(s)	234, 856
Tru1I	TTAA	3 cut(s)	341, 681, 693
Tru9I	TTAA	3 cut(s)	341, 681, 693
TscAI	CASTG	3 cut(s)	82, 466, 489
TseFI	GTSAC	2 cut(s)	490, 498
TseI	GCWGC	3 cut(s)	449, 861, 1019
Tsp45I	GTSAC	2 cut(s)	490, 498
TspDTI	ATGAA	2 cut(s)	242, 590
TspGWI	ACGGA	1 cut(s)	638
TspRI	CASTG	3 cut(s)	82, 466, 489
VneI	GTGCAC	1 cut(s)	651
VpaK11BI	GGWCC	1 cut(s)	188
XapI	RAATTY	2 cut(s)	334, 592
XmiI	GTMKAC	1 cut(s)	1092
ZrmI	AGTACT	1 cut(s)	259
Zsp2I	ATGCAT	1 cut(s)	885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.