AT1G59453

BEST Arabidopsis thaliana protein match is B-block binding subunit of TFIIIC (TAIR

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
21846902 .. 21849405
2504 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G59453.1

Sequence Viewer

Length: 1998 bp
ATGATGAGGAATGATAAAGTTCGTAAGGCGGTCATGAGGCTTTGCAATCTACTCAGTGAGCGTTATGCAAAACATCTAAAGACGGAATCAGATTCTGTTGAGCATCGTAAAGATGAAGGAAAATGGGATGACTTCAATGAAAAGAGTATAAGCCAAGCCTTTAATAATGTTCTTGAGCTCAAGAAGATGGGTAAACTGATGCCCTCTCAACGGACGAGACCTGAAATTCACACAGAGGACATTCAAACTGTTTCTATTGATCAAGTTAAAGATACATCGCGTCTTCATCAGATTTTTAAGCATGTAGATGAAAAGGACAATGGTTGTATACAAGTGCAGGAATCTCTGGTAGTGTCTACCGCTGTTGAACTGTTAAAGCTTGTGTTTCTAAGCATGCCTACTGCACCTAGTATGCCAAATTTACTGGAAGATACCTTACGACGATATTCCGAGGGTGACCTCTTCACCGCCTATAGCTACCTCCGAGACAAAAAGTTCTTGGTTGGTGGAAGTGATGGACAACCATTTGTGTTATCTCAGAATTTCTTGCATAGTATTTCAAAGTCACCATTCCCGGTTAATACTGGGAAAAGAGCTGCCAAGTTCTCAAGTTGGCTTGTCGAACACGAAAGAGAACTTATGGATGAGGGAGTCACTCTTACTTCAGATTTGCAATGTGGTGATGTTTTGAATTTCTTTTCATTGGTTGCTTCTGGTGAACTCTCTTTATCTGTATCTTTGCCTGAAGAAGGTGTTGGGGAGCCTGAACATCGAAGAGGTTTAAAACGTAGAGCTGAGGATGTAGAAGAATCTGAACTTGATAGTGCTAAGAAATTTAAGTTACTAGGTGAAGGTGAAATCAACGTCCGAAAGGAAAAGGGTTTCCCTGGTTTAGCAGTATCTGTTCATCGTGTAACTATACCAATAGCTAACGCAATAGAGTTGTTTAAGGATGATGACTCTTGGTCCGGTGAACTTCATTTCATGTCGGGAGAAACAAATAATGGCTGTGGTTCTGATGATATGAAAGAACTTTTGGACTCTAAGGATGCTACTGTGATACCAGGTAGTTTAGTTGATTCTCCTTGGCAAGCAATGGCTAGTGTTGCTAGTTGTATTATGTCCGGTTCTGCAGAGGAGCAACAGAGTTTAATCAGTCCCGAGGTTTTCGAAGCGGTTTCCAATGCCCTTCACAAGGCTGGTGACCAAGGTCTAAGCATTGAAGAAGTCCACTTTCTTATTAATATTCCAAGCCAAGAAACTTGTGACTGCATTGTAGAAGTACTTCAAACATTTGGAGTAGCTTTGAAGGTAAATGGCTATGATAATTTCCGTCTTGTCCATTCGCTCTACCGATCAAAGTACTTCTTGACATTGGCGGATGGTGGAACTACCCAAAATGGTCAACAGTCTCAACCAGCGAACTACGTAGAAAAAGCTTTGGAGGAACATAGGTCAAACGATGTTGTCACCAGCGACTACAGTACTTCAAAAGACAAGCAAGTTCATGTTTCTGAGAACAGCGTTCACAAGGTCACGATTCTTAACATTCCTGAAATGGCTGAAACAAGCGGTTTGCAAGAGGAATCTACCAAAGCTCCATCTGTTACTTTTGGAACGAGCATCGAAGGCGAAACGAAGGAATCAACTTCTGTGAAGTCACAACCTATATTTCCATGGATAAACGCAGATGGATCAGTAAATAAAGTTGTATTCGATGGACTAGTTCGTCGCGTTCTTGGTACCGTGATGCAAAATCCCGGTATACCAGAGGAGGAAATCATAAACCAAATGGACGTACTAAATCCTCAGAGCTGTAGAAAGCTTCTGGAGTTGATGACACTAGATGGGTACATGAAAGTAAGGGAAATGGTGCAAACCAAATTTAGCGGTCCTCCGTCTTTGTTAACCGGTCTTCTCTTTACCGGTCATAGAAAAACGGAACTTATCAGCCGGAAACACTTCTTTGCCAACTCCAAGGGACTCTTTGCATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

665

Amino Acids

74.01

Weight (kDa)

5.34

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1728
Acc65I GGTACC 1 cut(s) 1742
AccB1I GGYRCC 1 cut(s) 1742
AccI GTMKAC 3 cut(s) 328, 356, 1765
AccII CGCG 2 cut(s) 280, 1734
AciI CCGC 7 cut(s) 29, 360, 468, 1175, 1379, 1572, 1890
AclWI GGATC 1 cut(s) 1702
AcsI RAATTY 6 cut(s) 225, 418, 541, 691, 833, 1883
AcuI CTGAAG 2 cut(s) 648, 765
AfaI GTAC 6 cut(s) 1284, 1364, 1486, 1744, 1800, 1853
AfiI CCNNNNNNNGG 3 cut(s) 210, 749, 1195
AgeI ACCGGT 2 cut(s) 1910, 1925
AgsI TTSAA 9 cut(s) 136, 245, 368, 561, 691, 1223, 1289, 1309, 1491
AhdI GACNNNNNGTC 1 cut(s) 964
AhlI ACTAGT 1 cut(s) 1723
AjnI CCWGG 2 cut(s) 886, 1063
AjuI GAANNNNNNNTTGG 4 cut(s) 738, 770, 1019, 1051
Alw21I GWGCWC 1 cut(s) 180
Alw26I GTCTC 3 cut(s) 211, 480, 1416
AlwI GGATC 1 cut(s) 1702
AlwNI CAGNNNCTG 2 cut(s) 95, 902
Ama87I CYCGRG 1 cut(s) 1160
ApeKI GCWGC 1 cut(s) 596
ApoI RAATTY 6 cut(s) 225, 418, 541, 691, 833, 1883
AseI ATTAAT 1 cut(s) 1242
AsiGI ACCGGT 2 cut(s) 1910, 1925
Asp700I GAANNNNTTC 2 cut(s) 1284, 1961
Asp718I GGTACC 1 cut(s) 1742
AspS9I GGNCC 2 cut(s) 966, 1892
AsuC2I CCSGG 2 cut(s) 575, 1761
AsuII TTCGAA 1 cut(s) 1170
AvaI CYCGRG 1 cut(s) 1160
AvaII GGWCC 2 cut(s) 966, 1892
BanI GGYRCC 1 cut(s) 1742
BanII GRGCYC 1 cut(s) 180
BarI GAAGNNNNNNTAC 4 cut(s) 420, 452, 1269, 1301
BbsI GAAGAC 2 cut(s) 275, 1907
Bbv12I GWGCWC 1 cut(s) 180
BbvCI CCTCAGC 1 cut(s) 795
BbvI GCAGC 1 cut(s) 583
BccI CCATC 7 cut(s) 181, 509, 1376, 1609, 1685, 1712, 1841
BciT130I CCWGG 2 cut(s) 888, 1065
BclI TGATCA 1 cut(s) 259
BcnI CCSGG 2 cut(s) 575, 1761
BcoDI GTCTC 3 cut(s) 211, 480, 1416
BcuI ACTAGT 1 cut(s) 1723
BfaI CTAG 6 cut(s) 408, 845, 1101, 1110, 1724, 1844
BfmI CTRYAG 4 cut(s) 472, 1131, 1480, 1816
BisI GCNGC 1 cut(s) 597
BlsI GCNGC 1 cut(s) 598
BmcAI AGTACT 3 cut(s) 1284, 1364, 1486
Bme1390I CCNGG 4 cut(s) 575, 888, 1065, 1761
Bme18I GGWCC 2 cut(s) 966, 1892
BmeRI GACNNNNNGTC 1 cut(s) 964
BmeT110I CYCGRG 1 cut(s) 1160
BmgT120I GGNCC 2 cut(s) 966, 1892
BmiI GGNNCC 2 cut(s) 762, 1744
BmrFI CCNGG 4 cut(s) 575, 888, 1065, 1761
BmrI ACTGGG 1 cut(s) 594
BmsI GCATC 5 cut(s) 112, 189, 1039, 1632, 1740
BmuI ACTGGG 1 cut(s) 594
BoxI GACNNNNGTC 1 cut(s) 1209
BpiI GAAGAC 2 cut(s) 275, 1907
BpmI CTGGAG 1 cut(s) 1850
Bpu10I CCTNAGC 1 cut(s) 795
Bpu14I TTCGAA 1 cut(s) 1170
BpuEI CTTGAG 3 cut(s) 164, 194, 592
BpuMI CCSGG 2 cut(s) 575, 1761
BsaAI YACGTR 1 cut(s) 1429
BsaI GGTCTC 1 cut(s) 211
BsaJI CCNNGG 7 cut(s) 450, 886, 1085, 1161, 1207, 1676, 1977
BsaWI WCCGGW 4 cut(s) 968, 1124, 1910, 1925
BsaXI ACNNNNNCTCC 2 cut(s) 1582, 1612
Bsc4I CCNNNNNNNGG 3 cut(s) 210, 749, 1195
Bse118I RCCGGY 2 cut(s) 1910, 1925
Bse1I ACTGG 2 cut(s) 429, 589
Bse3DI GCAATG 2 cut(s) 680, 1101
BseBI CCWGG 2 cut(s) 888, 1065
BseDI CCNNGG 7 cut(s) 450, 886, 1085, 1161, 1207, 1676, 1977
BseGI GGATG 6 cut(s) 133, 649, 805, 958, 1054, 1387
BseLI CCNNNNNNNGG 3 cut(s) 210, 749, 1195
BseMI GCAATG 2 cut(s) 680, 1101
BseMII CTCAG 5 cut(s) 67, 551, 786, 1506, 1823
BseNI ACTGG 2 cut(s) 429, 589
BseRI GAGGAG 2 cut(s) 1151, 1787
BseXI GCAGC 1 cut(s) 583
BsgI GTGCAG 2 cut(s) 356, 387
Bsh1236I CGCG 2 cut(s) 280, 1734
BshNI GGYRCC 1 cut(s) 1742
BshTI ACCGGT 2 cut(s) 1910, 1925
BsiHKAI GWGCWC 1 cut(s) 180
BsiHKCI CYCGRG 1 cut(s) 1160
BsiSI CCGG 7 cut(s) 575, 969, 1125, 1761, 1911, 1926, 1954
BslFI GGGAC 1 cut(s) 1143
BslI CCNNNNNNNGG 3 cut(s) 210, 749, 1195
BsmAI GTCTC 3 cut(s) 211, 480, 1416
BsmFI GGGAC 1 cut(s) 1143
Bso31I GGTCTC 1 cut(s) 211
BsoBI CYCGRG 1 cut(s) 1160
Bsp119I TTCGAA 1 cut(s) 1170
Bsp1286I GDGCHC 1 cut(s) 180
Bsp143I GATC 3 cut(s) 259, 1355, 1694
Bsp19I CCATGG 1 cut(s) 1676
BspACI CCGC 7 cut(s) 29, 360, 468, 1175, 1379, 1572, 1890
BspCNI CTCAG 5 cut(s) 66, 550, 787, 1507, 1822
BspFNI CGCG 2 cut(s) 280, 1734
BspHI TCATGA 1 cut(s) 33
BspLI GGNNCC 2 cut(s) 762, 1744
BspMAI CTGCAG 1 cut(s) 1135
BspPI GGATC 1 cut(s) 1702
BspT104I TTCGAA 1 cut(s) 1170
BspT107I GGYRCC 1 cut(s) 1742
BspTNI GGTCTC 1 cut(s) 211
BsrDI GCAATG 2 cut(s) 680, 1101
BsrFI RCCGGY 2 cut(s) 1910, 1925
BsrI ACTGG 2 cut(s) 429, 589
BssAI RCCGGY 2 cut(s) 1910, 1925
BssECI CCNNGG 7 cut(s) 450, 886, 1085, 1161, 1207, 1676, 1977
BssMI GATC 3 cut(s) 259, 1355, 1694
BssNAI GTATAC 2 cut(s) 329, 1766
BssT1I CCWWGG 4 cut(s) 1085, 1207, 1676, 1977
Bst1107I GTATAC 2 cut(s) 329, 1766
Bst2UI CCWGG 2 cut(s) 888, 1065
Bst4CI ACNGT 6 cut(s) 250, 372, 1057, 1410, 1484, 1747
Bst6I CTCTTC 2 cut(s) 467, 769
BstBAI YACGTR 1 cut(s) 1429
BstBI TTCGAA 1 cut(s) 1170
BstC8I GCNNGC 2 cut(s) 395, 1092
BstDEI CTNAG 9 cut(s) 53, 389, 537, 795, 828, 1044, 1214, 1515, 1809
BstDSI CCRYGG 1 cut(s) 1676
BstEII GGTNACC 2 cut(s) 455, 1202
BstENI CCTNNNNNAGG 2 cut(s) 747, 1193
BstF5I GGATG 6 cut(s) 133, 649, 805, 958, 1054, 1387
BstFNI CGCG 2 cut(s) 280, 1734
BstKTI GATC 3 cut(s) 262, 1358, 1697
BstMAI GTCTC 3 cut(s) 211, 480, 1416
BstMBI GATC 3 cut(s) 259, 1355, 1694
BstMWI GCNNNNNNNGC 2 cut(s) 1106, 1629
BstNI CCWGG 2 cut(s) 888, 1065
BstNSI RCATGY 2 cut(s) 305, 397
BstPAI GACNNNNGTC 1 cut(s) 1209
BstPI GGTNACC 2 cut(s) 455, 1202
BstSCI CCNGG 4 cut(s) 573, 886, 1063, 1759
BstSFI CTRYAG 4 cut(s) 472, 1131, 1480, 1816
BstSNI TACGTA 1 cut(s) 1429
BstUI CGCG 2 cut(s) 280, 1734
BstV1I GCAGC 1 cut(s) 583
BstV2I GAAGAC 2 cut(s) 275, 1907
BstZ17I GTATAC 2 cut(s) 329, 1766
BtgI CCRYGG 1 cut(s) 1676
BtgZI GCGATG 1 cut(s) 261
BtsCI GGATG 6 cut(s) 133, 649, 805, 958, 1054, 1387
BtsIMutI CAGTG 1 cut(s) 61
Cac8I GCNNGC 2 cut(s) 395, 1092
CaiI CAGNNNCTG 2 cut(s) 95, 902
CciI TCATGA 1 cut(s) 33
Cfr10I RCCGGY 2 cut(s) 1910, 1925
Cfr13I GGNCC 2 cut(s) 966, 1892
CseI GACGC 1 cut(s) 269
CsiI ACCWGGT 1 cut(s) 1063
Csp6I GTAC 6 cut(s) 1283, 1363, 1485, 1743, 1799, 1852
CspAI ACCGGT 2 cut(s) 1910, 1925
CviAII CATG 7 cut(s) 34, 302, 394, 985, 1508, 1677, 1855
CviQI GTAC 6 cut(s) 1283, 1363, 1485, 1743, 1799, 1852
DdeI CTNAG 9 cut(s) 53, 389, 537, 795, 828, 1044, 1214, 1515, 1809
DpnI GATC 3 cut(s) 261, 1357, 1696
DpnII GATC 3 cut(s) 259, 1355, 1694
DraI TTTAAA 1 cut(s) 783
DrdI GACNNNNNNGTC 1 cut(s) 1728
DriI GACNNNNNGTC 1 cut(s) 964
DseDI GACNNNNNNGTC 1 cut(s) 1728
Eam1104I CTCTTC 2 cut(s) 467, 769
Eam1105I GACNNNNNGTC 1 cut(s) 964
EarI CTCTTC 2 cut(s) 467, 769
EciI GGCGGA 1 cut(s) 1394
Ecl136II GAGCTC 1 cut(s) 178
Eco105I TACGTA 1 cut(s) 1429
Eco130I CCWWGG 4 cut(s) 1085, 1207, 1676, 1977
Eco24I GRGCYC 1 cut(s) 180
Eco31I GGTCTC 1 cut(s) 211
Eco47I GGWCC 2 cut(s) 966, 1892
Eco53kI GAGCTC 1 cut(s) 178
Eco57I CTGAAG 2 cut(s) 648, 765
Eco88I CYCGRG 1 cut(s) 1160
Eco91I GGTNACC 2 cut(s) 455, 1202
EcoICRI GAGCTC 1 cut(s) 178
EcoNI CCTNNNNNAGG 2 cut(s) 747, 1193
EcoO65I GGTNACC 2 cut(s) 455, 1202
EcoRII CCWGG 2 cut(s) 886, 1063
EcoT14I CCWWGG 4 cut(s) 1085, 1207, 1676, 1977
EcoT38I GRGCYC 1 cut(s) 180
ErhI CCWWGG 4 cut(s) 1085, 1207, 1676, 1977
FaeI CATG 7 cut(s) 37, 305, 397, 988, 1511, 1680, 1858
FalI AAGNNNNNCTT 3 cut(s) 1352, 1384, 1970
FaqI GGGAC 1 cut(s) 1143
FatI CATG 7 cut(s) 33, 301, 393, 984, 1507, 1676, 1854
FbaI TGATCA 1 cut(s) 259
FblI GTMKAC 3 cut(s) 328, 356, 1765
Fnu4HI GCNGC 1 cut(s) 597
FokI GGATG 6 cut(s) 140, 656, 812, 965, 1061, 1394
FriOI GRGCYC 1 cut(s) 180
Fsp4HI GCNGC 1 cut(s) 597
FspBI CTAG 6 cut(s) 408, 845, 1101, 1110, 1724, 1844
GluI GCNGC 1 cut(s) 597
GsuI CTGGAG 1 cut(s) 1850
HapII CCGG 7 cut(s) 575, 969, 1125, 1761, 1911, 1926, 1954
HgaI GACGC 1 cut(s) 269
Hin1II CATG 7 cut(s) 37, 305, 397, 988, 1511, 1680, 1858
HincII GTYRAC 2 cut(s) 1406, 1908
HindII GTYRAC 2 cut(s) 1406, 1908
HindIII AAGCTT 3 cut(s) 377, 1437, 1823
HpaI GTTAAC 1 cut(s) 1908
HpaII CCGG 7 cut(s) 575, 969, 1125, 1761, 1911, 1926, 1954
Hpy188III TCNNGA 9 cut(s) 34, 173, 181, 990, 1160, 1369, 1537, 1553, 1829
Hpy99I CGWCG 2 cut(s) 444, 1734
HpyAV CCTTC 7 cut(s) 110, 743, 845, 1199, 1303, 1622, 1633
HpyCH4III ACNGT 6 cut(s) 250, 372, 1057, 1410, 1484, 1747
HpyCH4IV ACGT 4 cut(s) 787, 864, 1428, 1797
HpyF10VI GCNNNNNNNGC 2 cut(s) 1106, 1629
HpyF3I CTNAG 9 cut(s) 53, 389, 537, 795, 828, 1044, 1214, 1515, 1809
HpySE526I ACGT 4 cut(s) 787, 864, 1428, 1797
Hsp92II CATG 7 cut(s) 37, 305, 397, 988, 1511, 1680, 1858
KpnI GGTACC 1 cut(s) 1746
Ksp22I TGATCA 1 cut(s) 259
KspAI GTTAAC 1 cut(s) 1908
Kzo9I GATC 3 cut(s) 259, 1355, 1694
LmnI GCTCC 3 cut(s) 760, 1138, 1603
Lsp1109I GCAGC 1 cut(s) 583
LweI GCATC 5 cut(s) 112, 189, 1039, 1632, 1740
MabI ACCWGGT 1 cut(s) 1063
MaeI CTAG 6 cut(s) 408, 845, 1101, 1110, 1724, 1844
MaeII ACGT 4 cut(s) 787, 864, 1428, 1797
MalI GATC 3 cut(s) 261, 1357, 1696
MboI GATC 3 cut(s) 259, 1355, 1694
MboII GAAGA 9 cut(s) 196, 275, 440, 454, 758, 786, 818, 1235, 1907
MhlI GDGCHC 1 cut(s) 180
MluCI AATT 7 cut(s) 225, 418, 541, 691, 833, 1327, 1883
MlyI GAGTC 4 cut(s) 660, 953, 1034, 1977
MroXI GAANNNNTTC 2 cut(s) 1284, 1961
MslI CAYNNNNRTG 1 cut(s) 306
MspA1I CMGCKG 1 cut(s) 362
MspI CCGG 7 cut(s) 575, 969, 1125, 1761, 1911, 1926, 1954
MspR9I CCNGG 4 cut(s) 575, 888, 1065, 1761
MvaI CCWGG 2 cut(s) 888, 1065
MvnI CGCG 2 cut(s) 280, 1734
MwoI GCNNNNNNNGC 2 cut(s) 1106, 1629
NciI CCSGG 2 cut(s) 575, 1761
NcoI CCATGG 1 cut(s) 1676
NdeII GATC 3 cut(s) 259, 1355, 1694
NlaIII CATG 7 cut(s) 37, 305, 397, 988, 1511, 1680, 1858
NlaIV GGNNCC 2 cut(s) 762, 1744
NmuCI GTSAC 8 cut(s) 455, 564, 652, 1202, 1265, 1468, 1534, 1659
NspI RCATGY 2 cut(s) 305, 397
NspV TTCGAA 1 cut(s) 1170
PaeI GCATGC 1 cut(s) 397
PagI TCATGA 1 cut(s) 33
PdmI GAANNNNTTC 2 cut(s) 1284, 1961
PfeI GAWTC 8 cut(s) 86, 92, 341, 809, 1079, 1540, 1586, 1643
PinAI ACCGGT 2 cut(s) 1910, 1925
PkrI GCNGC 1 cut(s) 598
PleI GAGTC 4 cut(s) 659, 953, 1034, 1977
PpsI GAGTC 4 cut(s) 659, 953, 1034, 1977
Ppu21I YACGTR 1 cut(s) 1429
PshAI GACNNNNGTC 1 cut(s) 1209
PshBI ATTAAT 1 cut(s) 1242
Psp124BI GAGCTC 1 cut(s) 180
Psp6I CCWGG 2 cut(s) 886, 1063
PspEI GGTNACC 2 cut(s) 455, 1202
PspGI CCWGG 2 cut(s) 886, 1063
PspN4I GGNNCC 2 cut(s) 762, 1744
PspPI GGNCC 2 cut(s) 966, 1892
PstI CTGCAG 1 cut(s) 1135
PstNI CAGNNNCTG 2 cut(s) 95, 902
RsaI GTAC 6 cut(s) 1284, 1364, 1486, 1744, 1800, 1853
RsaNI GTAC 6 cut(s) 1283, 1363, 1485, 1743, 1799, 1852
RseI CAYNNNNRTG 1 cut(s) 306
SacI GAGCTC 1 cut(s) 180
SatI GCNGC 1 cut(s) 597
Sau3AI GATC 3 cut(s) 259, 1355, 1694
Sau96I GGNCC 2 cut(s) 966, 1892
ScaI AGTACT 3 cut(s) 1284, 1364, 1486
SchI GAGTC 4 cut(s) 660, 953, 1034, 1977
ScrFI CCNGG 4 cut(s) 575, 888, 1065, 1761
SduI GDGCHC 1 cut(s) 180
SexAI ACCWGGT 1 cut(s) 1063
SfaNI GCATC 5 cut(s) 112, 189, 1039, 1632, 1740
SfcI CTRYAG 4 cut(s) 472, 1131, 1480, 1816
SfuI TTCGAA 1 cut(s) 1170
SinI GGWCC 2 cut(s) 966, 1892
SmiMI CAYNNNNRTG 1 cut(s) 306
SmlI CTYRAG 3 cut(s) 173, 179, 607
SmoI CTYRAG 3 cut(s) 173, 179, 607
SnaBI TACGTA 1 cut(s) 1429
SpeI ACTAGT 1 cut(s) 1723
SphI GCATGC 1 cut(s) 397
Sse9I AATT 7 cut(s) 225, 418, 541, 691, 833, 1327, 1883
SsiI CCGC 7 cut(s) 29, 360, 468, 1175, 1379, 1572, 1890
SspI AATATT 1 cut(s) 1246
SspMI CTAG 6 cut(s) 408, 845, 1101, 1110, 1724, 1844
SstI GAGCTC 1 cut(s) 180
StyD4I CCNGG 4 cut(s) 573, 886, 1063, 1759
StyI CCWWGG 4 cut(s) 1085, 1207, 1676, 1977
TaaI ACNGT 6 cut(s) 250, 372, 1057, 1410, 1484, 1747
TaiI ACGT 4 cut(s) 790, 867, 1431, 1800
TaqI TCGA 5 cut(s) 621, 772, 1170, 1626, 1716
TasI AATT 7 cut(s) 225, 418, 541, 691, 833, 1327, 1883
TatI WGTACW 3 cut(s) 1282, 1362, 1484
TfiI GAWTC 8 cut(s) 86, 92, 341, 809, 1079, 1540, 1586, 1643
TscAI CASTG 1 cut(s) 61
TseFI GTSAC 8 cut(s) 455, 564, 652, 1202, 1265, 1468, 1534, 1659
TseI GCWGC 1 cut(s) 596
Tsp45I GTSAC 8 cut(s) 455, 564, 652, 1202, 1265, 1468, 1534, 1659
TspGWI ACGGA 5 cut(s) 98, 226, 1322, 1887, 1955
TspRI CASTG 1 cut(s) 61
VpaK11BI GGWCC 2 cut(s) 966, 1892
VspI ATTAAT 1 cut(s) 1242
XagI CCTNNNNNAGG 2 cut(s) 747, 1193
XapI RAATTY 6 cut(s) 225, 418, 541, 691, 833, 1883
XceI RCATGY 2 cut(s) 305, 397
XmiI GTMKAC 3 cut(s) 328, 356, 1765
XmnI GAANNNNTTC 2 cut(s) 1284, 1961
XspI CTAG 6 cut(s) 408, 845, 1101, 1110, 1724, 1844
ZrmI AGTACT 3 cut(s) 1284, 1364, 1486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.