Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005357

Physical Location & Seq

Genomic Coordinates Reverse (-)

22200694 .. 22205400

Gene Structure 4707 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G60200.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2700 bp

ATGGCCGACGAATCTTCTTCTCCGGCCACGGGGGATCCCAATTCACAGAAACCAGAATCCACTACTCCGATTTCAATTCCCAATCCAAATCCCAATCCTTCACTAACACCACCGCCGCCTCAACAACATTCGCAACCACCAGTCGCTCCTCTGGTTCCACCTGGTCCGCCTTATGCTCCTCCGGCTCAGATTCCTAGCTCGCTTCTCCCCACCAATCTCCCGCCGCCACCACCATTCCGTCCCGGTATGCAGTTCACTCCCGTTGCGAATTTTCAAAACCCTAGCTCTGGAGTTCCTCCTCCAGGATCTATGCCTCAGTATCAACCGCAGCCTGGTATGAGACCTTTCCAGCCTATGGCTAATGGTTATCCCGGAATTCATGGTGTTGCTCCTCCTGGTGCCATGCCTCCTCATGGGCTTCTCCGGTATCCTTCTCCATATCCAACAATGGTTCGTCCTGGATTCATTATGCGGCCGCCTGGTACAATCGGTGCTGTTCAACTAGCACCACGACCCCTTATTCCAGGAATGCCTGGTCTCCGTCCTGTAATGCCTCCTATGGTTAGACCGGCTTCTCTTCCTTTTGTAACACCTGCAGAAAAGCCCCAGACCACAATTTACATTGGCAAGATAGCTACCGTGGAAAATGACTTTATGATGTCTATTCTTGAGTTTTGTGGCCATGTCAAAAGCTGTTTACGTGCGGAAGATCCTACCACCAAGAAACCTAAAGGTTTTGGATTCTATGAATTTGAATCAGCTGAAGGGATTCTCCGCGCAATACGCCTGCTGACCCAACGTACTATAGATGGACAAGAGCTTTTGGTGAATGTTAATCAAGCAACAAAGGAGTATTTGCTAAAATATGTTGAGAAGAAAATAGAGACTGCAAAGAAAGCCAAGGAAAGTCAAGGAACCAAAGAGAACCAAGCTGAAGGTCCTGAGAGTGAGCAAGACAAGCTTGAGAGTGCTGATAATGAGACAGGGAAGGATGGAGAATCGAAGATTAAAGAAAACATCGATATTGCGAATTCTGCTGTCCTAACTGATGAAGAAAGGGAAGCAGACAGAGAGGCTATGGAAAAGATTGAAACTGCTATTGAAGAAAGGTTAAAGTCCAACCCTTTGCCTCCTCCACCACCACCACCTGCTGATGGTTCAGGCATGGAATTTGCTTTCAAATCTAAGGATGGTGACTCCAACACTGACGTAGCTAGGAGTGATGCCGCAGCAAATGATGTTGAGACTTCTGGAGAACACAATAGGCCTGACACAAGCTCACCTGATTGGAGTAAGAGAAATGACCGAAGAAGCAGAGAAAGAGGTGAGAAGGAGCAAGAAATGGATAGATACGAGAGGGAGGCTGAAAGAGAACGGTCAAGGAAAGAGAGAGAGCAAAGGAGGAAACTTGAGGATGCAGAGCGTGCTTACCAGACTCGTCTTCGACAATGGGAACGAAGAGAAAGAGAAAAGGAGAAGGAACGACAGTACGAGAAGGAGAAAGAGAAAGAGAAAGAGCGCAAGAGGAAAAAGGAAATCCGCTATGAGGAAGAAGAGGAAGAAGACGATGATGATTCAAGAAGAAGATGGCATAGGGCTGCATTAGATGAGAGAAGAAGACGACAACTAAGAGAAAAGGAGGATGACTTAGCTGATAGATTGAAAGAAGAGGAAGAGGTTGCTGAGGCGAAGAGGAGTGCCGAGGAGCAAAATTTGCAGCAACAGCAATTAGATGCCTTAAGAATCCTATCGGGACAGGCAGCTATTGGAAGCGAAACGGTTCAGACATCACCTATTGAAAATGATCACAAGGCAACTCTCCAAACTGTCGGTGAATCTGCCAATGAGCACCATGCAGCAGATTTTGAAGAAAATGGTTCTGGTAATGAATCGATGGCTATCGATAATAATAGTGGATCAGAGGCACATGCTCCCTCAAAGAAATTAGGATTTGGGCTTGTGGGATCCGGAAAGCGAACTTCTGTGCCTTCTGTTTTCTATGAGGAGGATGAAGATGAAGCACGTAAGGCTAAAAAGATGAAACCTTTGGTTCCTATAGATTACTCAACCGAGGAACAAGAGGCTGTGGCCCATGGTGGCTCAGGGAATACACCACCTCATTTGGCTTTAGCCGCTGAATTTGCAAAACGAATTTCGAGTACCAATCCCAAGGAAGAGACGATAGAAACCGAAAAACAAAGGAGCAGACGTTCTCATGATAAGGCAAGCCACCGGGACAGGGAAAGGGAAAGGGAAAGGGACAGGGACAGGGATAGAGTCAGGGACCGAGGTGACGGGCATAGTGGTCCCACCAAAGACGCCAAAGAGTCTGGAAAAGCAAAGATAATTGATACTAAGTTTCTGGATGCGAAACAATTGATAGATACAATCCCAAAGACAAAGGAAGATTTATTTTCTTACGAGATAAACTGGGCTATGTATGACAAGCACCAAGTGCACGAAAGAATGAGACCATGGATCTCAAAGAAAATTATGGAGTTTCTCGGAGAAGAGGAAGCCACTCTGGTAGATTTCATCGTGTCAAACACTCAACAACACGTGCAGGCGTCTCAGATGCTTGAGCTGTTGCAATCAATTCTAGACGAAGAAGCTGAGATGTTTGTGCTGAAGATGTGGAGAATGCTCATCTTTGAGATCAAGCGGGTTGAAGCTGGAGTCCCGGTAAAATCCAAAGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000381 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0008150 GO:0010468 GO:0010941 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0042981 GO:0043067 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:1901363 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PWI RRM_1

Protein Analysis

899

Amino Acids

101.5

Weight (kDa)

5.54

Isoelectric Point (pI)

61.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	73 - 125	9.8e-07	RNA recognition motif
PWI	PF01480	673 - 736	5.2e-13	PWI domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60200 AT1G60200 AT1G60200 AT1G60200
fragaria_vesca	FvH4_4g34570 FvH4_4g34571 FvH4_4g34571 FvH4_4g34571 FvH4_4g34571
malus_domestica	MD13G1091200.v1.1 MD16G1091700.v1.1
prunus_persica	Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1
pyrus_communis	pycom13g07940 pycom16g07830
rosa_chinensis	RchiOBHm_Chr4g0443951
rosa_laevigata	RLG00000005874
rosa_multiflora	Rmu_sc0011390.1_g000002
rosa_roxburghii	Rroxscaffold_5G00384490
rosa_rugosa	Rorug04G0348500 Rorug04G0348500
rosa_samantha	Rh4AG409100 Rh4BG420200 Rh4CG434200 Rh4DG415200
rosa_wichuraiana	Rw4G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	601, 1156
Acc36I	ACCTGC	2 cut(s)	601, 1156
AccB1I	GGYRCC	1 cut(s)	398
AccB7I	CCANNNNNTGG	1 cut(s)	355
AccII	CGCG	1 cut(s)	777
AccIII	TCCGGA	1 cut(s)	1967
AclWI	GGATC	8 cut(s)	29, 42, 313, 704, 1924, 1959, 1972, 2486
AcoI	YGGCCR	4 cut(s)	3, 24, 473, 679
AcsI	RAATTY	8 cut(s)	268, 375, 749, 1030, 1169, 1711, 2138, 2151
AcuI	CTGAAG	3 cut(s)	783, 954, 2648
AcvI	CACGTG	1 cut(s)	2560
AcyI	GRCGYC	2 cut(s)	2319, 2567
AdeI	CACNNNGTG	1 cut(s)	2455
AfaI	GTAC	4 cut(s)	484, 802, 1490, 2161
AfiI	CCNNNNNNNGG	9 cut(s)	29, 287, 302, 332, 355, 413, 1154, 1546, 2239
AflII	CTTAAG	1 cut(s)	1738
AflIII	ACRYGT	1 cut(s)	2557
AjnI	CCWGG	8 cut(s)	160, 301, 331, 394, 457, 478, 523, 532
AloI	GAACNNNNNNTCC	2 cut(s)	2194, 2226
Alw21I	GWGCWC	2 cut(s)	1851, 2460
Alw26I	GTCTC	8 cut(s)	334, 542, 878, 974, 1238, 2171, 2464, 2574
Alw44I	GTGCAC	1 cut(s)	2456
AlwI	GGATC	8 cut(s)	29, 42, 313, 704, 1924, 1959, 1972, 2486
Aor13HI	TCCGGA	1 cut(s)	1967
AoxI	GGCC	6 cut(s)	3, 24, 473, 679, 1265, 2088
ApaLI	GTGCAC	1 cut(s)	2456
ApeKI	GCWGC	6 cut(s)	328, 1229, 1598, 1717, 1760, 1856
ApoI	RAATTY	8 cut(s)	268, 375, 749, 1030, 1169, 1711, 2138, 2151
Asp700I	GAANNNNTTC	2 cut(s)	768, 1779
AspLEI	GCGC	2 cut(s)	779, 1521
AspS9I	GGNCC	5 cut(s)	164, 938, 2089, 2284, 2306
AsuC2I	CCSGG	4 cut(s)	243, 372, 2234, 2681
AsuHPI	GGTGA	7 cut(s)	838, 1205, 1272, 1337, 1782, 1844, 2303
AvaII	GGWCC	4 cut(s)	164, 938, 2284, 2306
BaeGI	GKGCMC	1 cut(s)	2460
BalI	TGGCCA	1 cut(s)	681
BamHI	GGATCC	2 cut(s)	34, 1964
BanI	GGYRCC	1 cut(s)	398
BbrPI	CACGTG	1 cut(s)	2560
BbsI	GAAGAC	3 cut(s)	1433, 1569, 1624
Bbv12I	GWGCWC	2 cut(s)	1851, 2460
BbvCI	CCTCAGC	1 cut(s)	1683
BbvI	GCAGC	6 cut(s)	340, 1241, 1585, 1729, 1772, 1868
BccI	CCATC	6 cut(s)	803, 986, 1148, 1184, 1581, 1888
BciT130I	CCWGG	8 cut(s)	162, 303, 333, 396, 459, 480, 525, 534
BciVI	GTATCC	1 cut(s)	438
BclI	TGATCA	1 cut(s)	1804
BcnI	CCSGG	4 cut(s)	243, 372, 2234, 2681
BcoDI	GTCTC	8 cut(s)	334, 542, 878, 974, 1238, 2171, 2464, 2574
BfaI	CTAG	5 cut(s)	195, 282, 503, 1215, 2600
BfmI	CTRYAG	3 cut(s)	594, 804, 2055
BfrI	CTTAAG	1 cut(s)	1738
BfuAI	ACCTGC	2 cut(s)	601, 1156
BfuI	GTATCC	1 cut(s)	438
Bme18I	GGWCC	4 cut(s)	164, 938, 2284, 2306
BmgT120I	GGNCC	5 cut(s)	164, 938, 2089, 2284, 2306
BmiI	GGNNCC	8 cut(s)	36, 156, 400, 916, 1966, 2052, 2285, 2308
BmrI	ACTGGG	1 cut(s)	2440
BmsI	GCATC	5 cut(s)	1213, 1405, 1723, 2356, 2565
BmuI	ACTGGG	1 cut(s)	2440
BpiI	GAAGAC	3 cut(s)	1433, 1569, 1624
BpmI	CTGGAG	4 cut(s)	285, 309, 1272, 2694
Bpu10I	CCTNAGC	2 cut(s)	1683, 2101
BpuEI	CTTGAG	4 cut(s)	689, 983, 1430, 2600
BpuMI	CCSGG	4 cut(s)	243, 372, 2234, 2681
Bsa29I	ATCGAT	3 cut(s)	1020, 1892, 1902
BsaAI	YACGTR	3 cut(s)	701, 2024, 2560
BsaBI	GATNNNNATC	1 cut(s)	1898
BsaHI	GRCGYC	2 cut(s)	2319, 2567
BsaI	GGTCTC	3 cut(s)	334, 542, 2464
BsaJI	CCNNGG	9 cut(s)	27, 639, 900, 1701, 2070, 2092, 2169, 2287, 2474
BsaWI	WCCGGW	2 cut(s)	423, 1967
BsaXI	ACNNNNNCTCC	4 cut(s)	2194, 2224, 2667, 2697
Bsc4I	CCNNNNNNNGG	9 cut(s)	29, 287, 302, 332, 355, 413, 1154, 1546, 2239
Bse118I	RCCGGY	1 cut(s)	568
Bse1I	ACTGG	2 cut(s)	140, 2435
Bse8I	GATNNNNATC	1 cut(s)	1898
BseAI	TCCGGA	1 cut(s)	1967
BseBI	CCWGG	8 cut(s)	162, 303, 333, 396, 459, 480, 525, 534
BseCI	ATCGAT	3 cut(s)	1020, 1892, 1902
BseDI	CCNNGG	9 cut(s)	27, 639, 900, 1701, 2070, 2092, 2169, 2287, 2474
BseGI	GGATG	6 cut(s)	997, 1195, 1420, 1648, 2014, 2371
BseJI	GATNNNNATC	1 cut(s)	1898
BseLI	CCNNNNNNNGG	9 cut(s)	29, 287, 302, 332, 355, 413, 1154, 1546, 2239
BseMII	CTCAG	7 cut(s)	200, 329, 933, 1674, 2115, 2585, 2604
BseNI	ACTGG	2 cut(s)	140, 2435
BseRI	GAGGAG	9 cut(s)	138, 168, 288, 381, 399, 1122, 1708, 1718, 2018
BseSI	GKGCMC	1 cut(s)	2460
BseX3I	CGGCCG	1 cut(s)	473
BseXI	GCAGC	6 cut(s)	340, 1241, 1585, 1729, 1772, 1868
BsgI	GTGCAG	1 cut(s)	2582
Bsh1236I	CGCG	1 cut(s)	777
Bsh1285I	CGRYCG	1 cut(s)	476
BshFI	GGCC	6 cut(s)	5, 26, 475, 681, 1267, 2090
BshNI	GGYRCC	1 cut(s)	398
BshVI	ATCGAT	3 cut(s)	1020, 1892, 1902
BsiEI	CGRYCG	1 cut(s)	476
BsiHKAI	GWGCWC	2 cut(s)	1851, 2460
BsiSI	CCGG	9 cut(s)	23, 182, 243, 372, 424, 569, 1968, 2233, 2681
BslFI	GGGAC	8 cut(s)	225, 1767, 2249, 2273, 2279, 2292, 2297, 2663
BslI	CCNNNNNNNGG	9 cut(s)	29, 287, 302, 332, 355, 413, 1154, 1546, 2239
BsmAI	GTCTC	8 cut(s)	334, 542, 878, 974, 1238, 2171, 2464, 2574
BsmBI	CGTCTC	2 cut(s)	2171, 2574
BsmFI	GGGAC	8 cut(s)	225, 1767, 2249, 2273, 2279, 2292, 2297, 2663
BsmI	GAATGC	2 cut(s)	534, 2646
BsnI	GGCC	6 cut(s)	5, 26, 475, 681, 1267, 2090
Bso31I	GGTCTC	3 cut(s)	334, 542, 2464
Bsp1286I	GDGCHC	2 cut(s)	1851, 2460
Bsp13I	TCCGGA	1 cut(s)	1967
Bsp143I	GATC	8 cut(s)	34, 305, 709, 1804, 1916, 1964, 2478, 2655
Bsp19I	CCATGG	2 cut(s)	2092, 2474
BspANI	GGCC	6 cut(s)	5, 26, 475, 681, 1267, 2090
BspCNI	CTCAG	7 cut(s)	199, 328, 934, 1675, 2114, 2584, 2605
BspDI	ATCGAT	3 cut(s)	1020, 1892, 1902
BspEI	TCCGGA	1 cut(s)	1967
BspFNI	CGCG	1 cut(s)	777
BspHI	TCATGA	1 cut(s)	2215
BspLI	GGNNCC	8 cut(s)	36, 156, 400, 916, 1966, 2052, 2285, 2308
BspMAI	CTGCAG	1 cut(s)	598
BspMI	ACCTGC	2 cut(s)	601, 1156
BspPI	GGATC	8 cut(s)	29, 42, 313, 704, 1924, 1959, 1972, 2486
BspT107I	GGYRCC	1 cut(s)	398
BspTI	CTTAAG	1 cut(s)	1738
BspTNI	GGTCTC	3 cut(s)	334, 542, 2464
BsrFI	RCCGGY	1 cut(s)	568
BsrI	ACTGG	2 cut(s)	140, 2435
BssAI	RCCGGY	1 cut(s)	568
BssECI	CCNNGG	9 cut(s)	27, 639, 900, 1701, 2070, 2092, 2169, 2287, 2474
BssMI	GATC	8 cut(s)	34, 305, 709, 1804, 1916, 1964, 2478, 2655
BssNI	GRCGYC	2 cut(s)	2319, 2567
BssT1I	CCWWGG	4 cut(s)	900, 2092, 2169, 2474
Bst2UI	CCWGG	8 cut(s)	162, 303, 333, 396, 459, 480, 525, 534
Bst4CI	ACNGT	5 cut(s)	640, 1377, 1488, 1780, 1828
Bst6I	CTCTTC	8 cut(s)	582, 1453, 1548, 1662, 1668, 1685, 2169, 2505
BstACI	GRCGYC	2 cut(s)	2319, 2567
BstAFI	CTTAAG	1 cut(s)	1738
BstAPI	GCANNNNNTGC	3 cut(s)	1424, 1714, 2455
BstBAI	YACGTR	3 cut(s)	701, 2024, 2560
BstC8I	GCNNGC	5 cut(s)	200, 788, 1425, 2227, 2565
BstDSI	CCRYGG	4 cut(s)	27, 639, 2092, 2474
BstENI	CCTNNNNNAGG	1 cut(s)	300
BstF5I	GGATG	6 cut(s)	997, 1195, 1420, 1648, 2014, 2371
BstFNI	CGCG	1 cut(s)	777
BstHHI	GCGC	2 cut(s)	779, 1521
BstKTI	GATC	8 cut(s)	37, 308, 712, 1807, 1919, 1967, 2481, 2658
BstMAI	GTCTC	8 cut(s)	334, 542, 878, 974, 1238, 2171, 2464, 2574
BstMBI	GATC	8 cut(s)	34, 305, 709, 1804, 1916, 1964, 2478, 2655
BstMCI	CGRYCG	1 cut(s)	476
BstNI	CCWGG	8 cut(s)	162, 303, 333, 396, 459, 480, 525, 534
BstNSI	RCATGY	1 cut(s)	1931
BstSFI	CTRYAG	3 cut(s)	594, 804, 2055
BstSLI	GKGCMC	1 cut(s)	2460
BstUI	CGCG	1 cut(s)	777
BstV1I	GCAGC	6 cut(s)	340, 1241, 1585, 1729, 1772, 1868
BstV2I	GAAGAC	3 cut(s)	1433, 1569, 1624
BstX2I	RGATCY	5 cut(s)	34, 305, 709, 1964, 2478
BstYI	RGATCY	5 cut(s)	34, 305, 709, 1964, 2478
BstZI	CGGCCG	1 cut(s)	473
Bsu15I	ATCGAT	3 cut(s)	1020, 1892, 1902
BsuI	GTATCC	1 cut(s)	438
BsuRI	GGCC	6 cut(s)	5, 26, 475, 681, 1267, 2090
BsuTUI	ATCGAT	3 cut(s)	1020, 1892, 1902
BtgI	CCRYGG	4 cut(s)	27, 639, 2092, 2474
BtsCI	GGATG	6 cut(s)	997, 1195, 1420, 1648, 2014, 2371
BtsIMutI	CAGTG	1 cut(s)	1203
BveI	ACCTGC	2 cut(s)	601, 1156
Cac8I	GCNNGC	5 cut(s)	200, 788, 1425, 2227, 2565
CciI	TCATGA	1 cut(s)	2215
CciNI	GCGGCCGC	1 cut(s)	473
CfoI	GCGC	2 cut(s)	779, 1521
Cfr10I	RCCGGY	1 cut(s)	568
Cfr13I	GGNCC	5 cut(s)	164, 938, 2089, 2284, 2306
ClaI	ATCGAT	3 cut(s)	1020, 1892, 1902
CseI	GACGC	2 cut(s)	2327, 2556
CsiI	ACCWGGT	1 cut(s)	160
Csp6I	GTAC	4 cut(s)	483, 801, 1489, 2160
CspCI	CAANNNNNGTGG	2 cut(s)	2103, 2138
CviQI	GTAC	4 cut(s)	483, 801, 1489, 2160
DpnI	GATC	8 cut(s)	36, 307, 711, 1806, 1918, 1966, 2480, 2657
DpnII	GATC	8 cut(s)	34, 305, 709, 1804, 1916, 1964, 2478, 2655
DraIII	CACNNNGTG	1 cut(s)	2455
EaeI	YGGCCR	4 cut(s)	3, 24, 473, 679
EagI	CGGCCG	1 cut(s)	473
Eam1104I	CTCTTC	8 cut(s)	582, 1453, 1548, 1662, 1668, 1685, 2169, 2505
EarI	CTCTTC	8 cut(s)	582, 1453, 1548, 1662, 1668, 1685, 2169, 2505
EciI	GGCGGA	1 cut(s)	156
EclXI	CGGCCG	1 cut(s)	473
Eco130I	CCWWGG	4 cut(s)	900, 2092, 2169, 2474
Eco147I	AGGCCT	1 cut(s)	1267
Eco31I	GGTCTC	3 cut(s)	334, 542, 2464
Eco47I	GGWCC	4 cut(s)	164, 938, 2284, 2306
Eco52I	CGGCCG	1 cut(s)	473
Eco57I	CTGAAG	3 cut(s)	783, 954, 2648
Eco72I	CACGTG	1 cut(s)	2560
EcoNI	CCTNNNNNAGG	1 cut(s)	300
EcoO109I	RGGNCCY	1 cut(s)	938
EcoRI	GAATTC	2 cut(s)	375, 1030
EcoRII	CCWGG	8 cut(s)	160, 301, 331, 394, 457, 478, 523, 532
EcoT14I	CCWWGG	4 cut(s)	900, 2092, 2169, 2474
ErhI	CCWWGG	4 cut(s)	900, 2092, 2169, 2474
Esp3I	CGTCTC	2 cut(s)	2171, 2574
FalI	AAGNNNNNCTT	2 cut(s)	945, 977
FaqI	GGGAC	8 cut(s)	225, 1767, 2249, 2273, 2279, 2292, 2297, 2663
FauI	CCCGC	2 cut(s)	228, 2655
FbaI	TGATCA	1 cut(s)	1804
FokI	GGATG	6 cut(s)	1004, 1202, 1427, 1655, 2021, 2378
FspBI	CTAG	5 cut(s)	195, 282, 503, 1215, 2600
GlaI	GCGC	2 cut(s)	778, 1520
GsuI	CTGGAG	4 cut(s)	285, 309, 1272, 2694
HaeIII	GGCC	6 cut(s)	5, 26, 475, 681, 1267, 2090
HapII	CCGG	9 cut(s)	23, 182, 243, 372, 424, 569, 1968, 2233, 2681
HgaI	GACGC	2 cut(s)	2327, 2556
HhaI	GCGC	2 cut(s)	779, 1521
Hin1I	GRCGYC	2 cut(s)	2319, 2567
Hin6I	GCGC	2 cut(s)	777, 1519
HinP1I	GCGC	2 cut(s)	777, 1519
HindIII	AAGCTT	1 cut(s)	959
HpaII	CCGG	9 cut(s)	23, 182, 243, 372, 424, 569, 1968, 2233, 2681
HphI	GGTGA	7 cut(s)	838, 1205, 1272, 1337, 1782, 1844, 2303
Hpy166II	GTNNAC	3 cut(s)	255, 698, 2458
Hpy188I	TCNGA	6 cut(s)	69, 189, 1785, 1921, 2507, 2574
Hpy8I	GTNNAC	3 cut(s)	255, 698, 2458
Hpy99I	CGWCG	1 cut(s)	11
HpyAV	CCTTC	9 cut(s)	108, 441, 758, 929, 982, 1324, 1471, 1489, 1998
HpyCH4III	ACNGT	5 cut(s)	640, 1377, 1488, 1780, 1828
HpyCH4IV	ACGT	6 cut(s)	700, 799, 1209, 2023, 2209, 2559
HpySE526I	ACGT	6 cut(s)	700, 799, 1209, 2023, 2209, 2559
Hsp92I	GRCGYC	2 cut(s)	2319, 2567
HspAI	GCGC	2 cut(s)	777, 1519
Kpn2I	TCCGGA	1 cut(s)	1967
Ksp22I	TGATCA	1 cut(s)	1804
Kzo9I	GATC	8 cut(s)	34, 305, 709, 1804, 1916, 1964, 2478, 2655
LmnI	GCTCC	7 cut(s)	151, 181, 394, 1333, 1705, 1936, 2202
Lsp1109I	GCAGC	6 cut(s)	340, 1241, 1585, 1729, 1772, 1868
LweI	GCATC	5 cut(s)	1213, 1405, 1723, 2356, 2565
MabI	ACCWGGT	1 cut(s)	160
MaeI	CTAG	5 cut(s)	195, 282, 503, 1215, 2600
MaeII	ACGT	6 cut(s)	700, 799, 1209, 2023, 2209, 2559
MaeIII	GTNAC	3 cut(s)	586, 1193, 2291
MalI	GATC	8 cut(s)	36, 307, 711, 1806, 1918, 1966, 2480, 2657
MboI	GATC	8 cut(s)	34, 305, 709, 1804, 1916, 1964, 2478, 2655
MfeI	CAATTG	1 cut(s)	2375
MflI	RGATCY	5 cut(s)	34, 305, 709, 1964, 2478
MhlI	GDGCHC	2 cut(s)	1851, 2460
MlsI	TGGCCA	1 cut(s)	681
MluNI	TGGCCA	1 cut(s)	681
MlyI	GAGTC	5 cut(s)	1190, 1429, 2286, 2336, 2685
MmeI	TCCRAC	3 cut(s)	467, 1143, 1224
Mox20I	TGGCCA	1 cut(s)	681
MroI	TCCGGA	1 cut(s)	1967
MroXI	GAANNNNTTC	2 cut(s)	768, 1779
MscI	TGGCCA	1 cut(s)	681
MseI	TTAA	4 cut(s)	834, 1008, 1112, 1739
Msp20I	TGGCCA	1 cut(s)	681
MspA1I	CMGCKG	2 cut(s)	761, 2135
MspCI	CTTAAG	1 cut(s)	1738
MspI	CCGG	9 cut(s)	23, 182, 243, 372, 424, 569, 1968, 2233, 2681
MunI	CAATTG	1 cut(s)	2375
Mva1269I	GAATGC	2 cut(s)	534, 2646
MvaI	CCWGG	8 cut(s)	162, 303, 333, 396, 459, 480, 525, 534
MvnI	CGCG	1 cut(s)	777
NciI	CCSGG	4 cut(s)	243, 372, 2234, 2681
NcoI	CCATGG	2 cut(s)	2092, 2474
NdeII	GATC	8 cut(s)	34, 305, 709, 1804, 1916, 1964, 2478, 2655
NlaIV	GGNNCC	8 cut(s)	36, 156, 400, 916, 1966, 2052, 2285, 2308
NmeAIII	GCCGAG	1 cut(s)	1726
NmuCI	GTSAC	2 cut(s)	1193, 2291
NotI	GCGGCCGC	1 cut(s)	473
NspI	RCATGY	1 cut(s)	1931
PagI	TCATGA	1 cut(s)	2215
PaqCI	CACCTGC	2 cut(s)	601, 1156
PceI	AGGCCT	1 cut(s)	1267
PctI	GAATGC	2 cut(s)	534, 2646
PdmI	GAANNNNTTC	2 cut(s)	768, 1779
PflMI	CCANNNNNTGG	1 cut(s)	355
PfoI	TCCNGGA	4 cut(s)	301, 370, 457, 523
PleI	GAGTC	5 cut(s)	1190, 1429, 2285, 2335, 2684
PmaCI	CACGTG	1 cut(s)	2560
PmlI	CACGTG	1 cut(s)	2560
PpsI	GAGTC	5 cut(s)	1190, 1429, 2285, 2335, 2684
Ppu21I	YACGTR	3 cut(s)	701, 2024, 2560
PpuMI	RGGWCCY	1 cut(s)	938
Psp5II	RGGWCCY	1 cut(s)	938
Psp6I	CCWGG	8 cut(s)	160, 301, 331, 394, 457, 478, 523, 532
PspCI	CACGTG	1 cut(s)	2560
PspGI	CCWGG	8 cut(s)	160, 301, 331, 394, 457, 478, 523, 532
PspN4I	GGNNCC	8 cut(s)	36, 156, 400, 916, 1966, 2052, 2285, 2308
PspPI	GGNCC	5 cut(s)	164, 938, 2089, 2284, 2306
PspPPI	RGGWCCY	1 cut(s)	938
PstI	CTGCAG	1 cut(s)	598
PsuI	RGATCY	5 cut(s)	34, 305, 709, 1964, 2478
PvuII	CAGCTG	1 cut(s)	761
RsaI	GTAC	4 cut(s)	484, 802, 1490, 2161
RsaNI	GTAC	4 cut(s)	483, 801, 1489, 2160
SaqAI	TTAA	4 cut(s)	834, 1008, 1112, 1739
Sau3AI	GATC	8 cut(s)	34, 305, 709, 1804, 1916, 1964, 2478, 2655
Sau96I	GGNCC	5 cut(s)	164, 938, 2089, 2284, 2306
SchI	GAGTC	5 cut(s)	1190, 1429, 2286, 2336, 2685
SduI	GDGCHC	2 cut(s)	1851, 2460
SexAI	ACCWGGT	1 cut(s)	160
SfaNI	GCATC	5 cut(s)	1213, 1405, 1723, 2356, 2565
SfcI	CTRYAG	3 cut(s)	594, 804, 2055
SinI	GGWCC	4 cut(s)	164, 938, 2284, 2306
SmlI	CTYRAG	5 cut(s)	668, 962, 1409, 1738, 2579
SmoI	CTYRAG	5 cut(s)	668, 962, 1409, 1738, 2579
SseBI	AGGCCT	1 cut(s)	1267
SspMI	CTAG	5 cut(s)	195, 282, 503, 1215, 2600
StuI	AGGCCT	1 cut(s)	1267
StyI	CCWWGG	4 cut(s)	900, 2092, 2169, 2474
TaaI	ACNGT	5 cut(s)	640, 1377, 1488, 1780, 1828
TaiI	ACGT	6 cut(s)	703, 802, 1212, 2026, 2212, 2562
TaqI	TCGA	6 cut(s)	1001, 1020, 1444, 1892, 1902, 2156
TaqII	GACCGA	2 cut(s)	1320, 2301
TauI	GCSGC	6 cut(s)	118, 226, 475, 478, 1229, 2135
Tru1I	TTAA	4 cut(s)	834, 1008, 1112, 1739
Tru9I	TTAA	4 cut(s)	834, 1008, 1112, 1739
TscAI	CASTG	1 cut(s)	1210
TseFI	GTSAC	2 cut(s)	1193, 2291
TseI	GCWGC	6 cut(s)	328, 1229, 1598, 1717, 1760, 1856
Tsp45I	GTSAC	2 cut(s)	1193, 2291
TspDTI	ATGAA	9 cut(s)	368, 454, 762, 1065, 1902, 2025, 2031, 2054, 2524
TspGWI	ACGGA	2 cut(s)	227, 530
TspRI	CASTG	1 cut(s)	1210
Van91I	CCANNNNNTGG	1 cut(s)	355
Vha464I	CTTAAG	1 cut(s)	1738
VneI	GTGCAC	1 cut(s)	2456
VpaK11BI	GGWCC	4 cut(s)	164, 938, 2284, 2306
XagI	CCTNNNNNAGG	1 cut(s)	300
XapI	RAATTY	8 cut(s)	268, 375, 749, 1030, 1169, 1711, 2138, 2151
XbaI	TCTAGA	1 cut(s)	2599
XceI	RCATGY	1 cut(s)	1931
XmnI	GAANNNNTTC	2 cut(s)	768, 1779
XspI	CTAG	5 cut(s)	195, 282, 503, 1215, 2600

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.