Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0005357

Physical Location & Seq

Genomic Coordinates Reverse (-)

6453998 .. 6457283

Gene Structure 3286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1091200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGATTCGGACCCCGTTTCCTCCACGCCCACCGGGAGCAACTGGTTTGCTTCAGCGTGCCCCTGTTCCTGGGATTCCTGGAGTTCGCCCAATTATCCCTCCTGTTGTTAGGCCGATTCTTCCTATTGTCACTCCAGCTGAGAAACCACAAACCACTGTTTATGTTGGGAAGATAGCACCAACGGTGGACAATGAATTTATGAAATATCTCCTCCAGTTGTGTGGACCTGTCAAGAGTTGGAAACGTGCTCAAGATCCCACAGATGGTACTCCTAGGCGCTTTGGGTTCTGCGAATTTGAATCTGCTGAAGGGGTTCTTCGGGCATTGCGTCTTCTCACTAATTTGAGCATTGATGGGCAGGACCTTGTTTTAAATGTTAATCAAGCAACAAGAGAGTATCTGGAGAGGGTTGTTAAAAAGAAGACTGAAAACTCAAAGAAGCTCAAAGAAGCTGAAGCAGCTGAGAAAGGTGATGGAAGTGCACTAGACGTTGAGAAGATTGTACCTTCAAATCCTTCTGTACAAGACTCAAAGGAGGAAGATGGTAATTCGAGTAACAAAGAAAATGACCCTGCCAATTTTGGTATTGTGACTGACGAAGACAAGGAAGCTGACCGGGAGGCTATGGAGAAGCTTACAAGTTTGATAGAGGAGAGAATAAAAAACAAACCTCTCCCTCCTCCGCCACCTACACCAGCCCCTGGTGATGGTACTAGGAATTCAAACTCAGCGCTGCCAGCTAAATCAAGGGATGGAGACTCTGATGTTGATATAACGAGAAATGATGCTTATGAAGAAAAAATTGATGAAGAGATAACTAGTGACAACAAAACAACAAGCGAGCAGGGGAGCCCTCAAACAAGCTCACATGATAGGAGCAGAAAGCAAGATCGGAGGAGCAGAGACAATGAGCGAGATATGAAACGGGAAAAGGAGCGTGAGATTGAAAGATACGAAAGAGAAACAGAGCGAGAACGGGTACGGAAGGAGAAGGAGCAAAGGAGAAAACTGGAGGATGCTGAGCATCAGTATGAAAAATGTCTCAAAGATTGGGAGTATAGGGAAAGGGAGAAAGAGAAACAGAGGCAGTATGAGAAGGAGAGGGAGAAAGAGAGGGAACGCAAACGGAGGAAAGAGATAATTTATGAAGAAGATGATGAGGATGAAGATTCCAGAAAAAAATGGAGGAGAAGTGTGTTGGAGGAGAAGAGAAAGAGGAGACTACGGGAGAAAGAAGAAGACTTAGCTGACAGGCAGAAAGAGGAAGAAGAAATTGCTGATGCTAAAGGGAGGGCTGAAGAGGAAAAGCAGCTGCAGCAAGAGAGAGATGCATTGAGGGATTCATCTGGCCATGTTGCAAATGGAAGCGAAAAAGCTGCTTTGGCTGAAGAATTCGGTGTGCAACTGAAAGATAAGGCAACTGAACAGGATAATGGGGGTGATTCTGGTCATGAGAATCATATAGGTGATGGGACTTTACAAAATGGTAACAGTGATGATGAGTCAACCATGACTTCAGTTTCTGCATCAGAACCGCAGCAGAGTGGCAGTGCCCCAGCAAAGAAGTTGGGTTTTGGCCTACTGGGTTCTGGAAAACGTACCGCTGTTCCTTCTGTTTTCAATGAGGAGGATGATGATGCACACAAGGACAAAAAAATGAGGCCCCTGGTTCCCATTGATTATTCAACCGAAGAACTACAGGCTGTCCAACCAATTTCTGGGACAGCTCCATCAAATTTGGCTGCAGCGGCTGAATTCGCAAAGCGAATATCAAATGCTAGTTCTAAAGAAGAGAAGCCAGTTACAGAGAAGGAAAGAAGTAGACGTTCTAATGATAGGTCAAGCCACCGGGATAGGGACCAGAATGGTGATGACTCTAATCGGACTAGAGATGAGCACAGGGAGAAGACTATTGACCGTGATACGGATCGAGACCATGCGATGAATAAACCAAGGACAAAGGATAATAAGAAGCTTTTGGATGCAAAACAACTGATCGATATGATTCCAAAGACAAAGGAGGAATTATTCTCCTATGAAATAAATTGGGCTATTTATGAACATCATGCACTACATGAACGCATGAGACCATGGATTTCGAAGAAGATTACGGAATTCCTGGGAGAGGAAGAGACCACACTGGTAGATTACATTGTATCTAGTACTCAGGAACATGTTGGAGCAGAACGCATGCTACAGCTGCTTCAATCCATTTTAGACGAAGAAGCCGAAATGTTTGTTCTCAAGATGTGGAGGATGCTCATCTTTGAAATTAAGAAGGTCGAGACAGGTCTGGCTTCAAGAACAAGAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000381 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0008150 GO:0010468 GO:0010941 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0042981 GO:0043067 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:1901363 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PWI RRM_1

Protein Analysis

772

Amino Acids

88.4

Weight (kDa)

5.47

Isoelectric Point (pI)

56.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	53 - 122	2.7e-08	RNA recognition motif
PWI	PF01480	694 - 757	1.3e-13	PWI domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60200 AT1G60200 AT1G60200 AT1G60200
fragaria_vesca	FvH4_4g34570 FvH4_4g34571 FvH4_4g34571 FvH4_4g34571 FvH4_4g34571
malus_domestica	MD13G1091200.v1.1 MD16G1091700.v1.1
prunus_persica	Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1
pyrus_communis	pycom13g07940 pycom16g07830
rosa_chinensis	RchiOBHm_Chr4g0443951
rosa_laevigata	RLG00000005874
rosa_multiflora	Rmu_sc0011390.1_g000002
rosa_roxburghii	Rroxscaffold_5G00384490
rosa_rugosa	Rorug04G0348500 Rorug04G0348500
rosa_samantha	Rh4AG409100 Rh4BG420200 Rh4CG434200 Rh4DG415200
rosa_wichuraiana	Rw4G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	701, 1718
AccI	GTMKAC	1 cut(s)	1822
AciI	CCGC	4 cut(s)	683, 1535, 1602, 1748
AclWI	GGATC	2 cut(s)	248, 1935
AcoI	YGGCCR	1 cut(s)	1348
AcsI	RAATTY	7 cut(s)	194, 293, 718, 1391, 1735, 1754, 2114
AcuI	CTGAAG	6 cut(s)	35, 327, 474, 1317, 1407, 1500
AfaI	GTAC	7 cut(s)	268, 504, 522, 712, 981, 1600, 2164
AfeI	AGCGCT	1 cut(s)	732
AfiI	CCNNNNNNNGG	8 cut(s)	68, 263, 701, 707, 1718, 1855, 1924, 2125
AflIII	ACRYGT	1 cut(s)	2173
AgsI	TTSAA	9 cut(s)	299, 510, 723, 947, 1621, 1686, 2207, 2270, 2301
AhlI	ACTAGT	1 cut(s)	818
AjnI	CCWGG	5 cut(s)	67, 76, 700, 1665, 2118
Alw21I	GWGCWC	3 cut(s)	250, 484, 1899
Alw26I	GTCTC	8 cut(s)	750, 897, 1046, 1213, 1926, 2080, 2126, 2279
Alw44I	GTGCAC	1 cut(s)	480
AlwI	GGATC	2 cut(s)	248, 1935
AlwNI	CAGNNNCTG	3 cut(s)	701, 1523, 1751
Aor51HI	AGCGCT	1 cut(s)	732
AoxI	GGCC	4 cut(s)	110, 1348, 1576, 1661
ApaLI	GTGCAC	1 cut(s)	480
ApoI	RAATTY	7 cut(s)	194, 293, 718, 1391, 1735, 1754, 2114
Asp700I	GAANNNNTTC	1 cut(s)	312
AspA2I	CCTAGG	1 cut(s)	272
AspLEI	GCGC	2 cut(s)	279, 733
AspS9I	GGNCC	5 cut(s)	9, 224, 361, 1662, 1858
AsuC2I	CCSGG	3 cut(s)	33, 617, 1850
AsuHPI	GGTGA	5 cut(s)	482, 716, 1451, 1478, 1880
AsuII	TTCGAA	1 cut(s)	2099
AvaII	GGWCC	4 cut(s)	9, 224, 361, 1858
AvrII	CCTAGG	1 cut(s)	272
BaeGI	GKGCMC	3 cut(s)	61, 484, 1555
BalI	TGGCCA	1 cut(s)	1350
BanII	GRGCYC	1 cut(s)	854
BbsI	GAAGAC	5 cut(s)	323, 428, 606, 1245, 1913
Bbv12I	GWGCWC	3 cut(s)	250, 484, 1899
BccI	CCATC	8 cut(s)	257, 347, 467, 536, 701, 746, 1463, 1738
BcgI	CGANNNNNNTGC	2 cut(s)	1358, 1392
BciT130I	CCWGG	5 cut(s)	69, 78, 702, 1667, 2120
BcnI	CCSGG	3 cut(s)	33, 617, 1850
BcoDI	GTCTC	8 cut(s)	750, 897, 1046, 1213, 1926, 2080, 2126, 2279
BcuI	ACTAGT	1 cut(s)	818
BfaI	CTAG	7 cut(s)	273, 485, 714, 819, 1779, 1887, 2160
BfmI	CTRYAG	4 cut(s)	1313, 1697, 1743, 2195
BfoI	RGCGCY	2 cut(s)	280, 734
BlnI	CCTAGG	1 cut(s)	272
BlpI	GCTNAGC	1 cut(s)	1020
BmcAI	AGTACT	1 cut(s)	2164
Bme1390I	CCNGG	8 cut(s)	33, 69, 78, 617, 702, 1667, 1850, 2120
Bme18I	GGWCC	4 cut(s)	9, 224, 361, 1858
BmgT120I	GGNCC	5 cut(s)	9, 224, 361, 1662, 1858
BmiI	GGNNCC	5 cut(s)	11, 851, 1664, 1671, 1859
BmrFI	CCNGG	8 cut(s)	33, 69, 78, 617, 702, 1667, 1850, 2120
BmrI	ACTGGG	1 cut(s)	1592
BmsI	GCATC	9 cut(s)	775, 1006, 1033, 1270, 1318, 1535, 1627, 1972, 2247
BmuI	ACTGGG	1 cut(s)	1592
BpiI	GAAGAC	5 cut(s)	323, 428, 606, 1245, 1913
BpmI	CTGGAG	5 cut(s)	99, 117, 197, 422, 1031
Bpu1102I	GCTNAGC	1 cut(s)	1020
Bpu14I	TTCGAA	1 cut(s)	2099
BpuEI	CTTGAG	2 cut(s)	234, 2228
BpuMI	CCSGG	3 cut(s)	33, 617, 1850
Bsa29I	ATCGAT	1 cut(s)	1998
BsaBI	GATNNNNATC	2 cut(s)	1926, 2261
BsaI	GGTCTC	3 cut(s)	1926, 2080, 2126
BsaJI	CCNNGG	7 cut(s)	68, 272, 700, 1665, 1952, 2090, 2119
BsaXI	ACNNNNNCTCC	2 cut(s)	1177, 1207
Bsc4I	CCNNNNNNNGG	8 cut(s)	68, 263, 701, 707, 1718, 1855, 1924, 2125
Bse1I	ACTGG	6 cut(s)	46, 214, 1014, 1587, 1799, 2145
Bse3DI	GCAATG	1 cut(s)	323
Bse8I	GATNNNNATC	2 cut(s)	1926, 2261
BseBI	CCWGG	5 cut(s)	69, 78, 702, 1667, 2120
BseCI	ATCGAT	1 cut(s)	1998
BseDI	CCNNGG	7 cut(s)	68, 272, 700, 1665, 1952, 2090, 2119
BseGI	GGATG	6 cut(s)	757, 1021, 1168, 1636, 1987, 2262
BseJI	GATNNNNATC	2 cut(s)	1926, 2261
BseLI	CCNNNNNNNGG	8 cut(s)	68, 263, 701, 707, 1718, 1855, 1924, 2125
BseMI	GCAATG	1 cut(s)	323
BseMII	CTCAG	5 cut(s)	129, 453, 741, 1011, 2180
BseNI	ACTGG	6 cut(s)	46, 214, 1014, 1587, 1799, 2145
BseRI	GAGGAG	8 cut(s)	200, 665, 669, 910, 1201, 1217, 1231, 1640
BseSI	GKGCMC	3 cut(s)	61, 484, 1555
BseYI	CCCAGC	1 cut(s)	1555
BshFI	GGCC	4 cut(s)	112, 1350, 1578, 1663
BshVI	ATCGAT	1 cut(s)	1998
BsiHKAI	GWGCWC	3 cut(s)	250, 484, 1899
BsiSI	CCGG	3 cut(s)	32, 616, 1849
BslFI	GGGAC	3 cut(s)	1486, 1735, 1871
BslI	CCNNNNNNNGG	8 cut(s)	68, 263, 701, 707, 1718, 1855, 1924, 2125
BsmAI	GTCTC	8 cut(s)	750, 897, 1046, 1213, 1926, 2080, 2126, 2279
BsmFI	GGGAC	3 cut(s)	1486, 1735, 1871
BsnI	GGCC	4 cut(s)	112, 1350, 1578, 1663
Bso31I	GGTCTC	3 cut(s)	1926, 2080, 2126
Bsp119I	TTCGAA	1 cut(s)	2099
Bsp1286I	GDGCHC	6 cut(s)	61, 250, 484, 854, 1555, 1899
Bsp1407I	TGTACA	1 cut(s)	520
Bsp143I	GATC	4 cut(s)	253, 889, 1927, 1995
Bsp1720I	GCTNAGC	1 cut(s)	1020
Bsp19I	CCATGG	1 cut(s)	2090
BspACI	CCGC	4 cut(s)	683, 1535, 1602, 1748
BspANI	GGCC	4 cut(s)	112, 1350, 1578, 1663
BspCNI	CTCAG	5 cut(s)	130, 454, 740, 1012, 2179
BspDI	ATCGAT	1 cut(s)	1998
BspHI	TCATGA	1 cut(s)	1450
BspLI	GGNNCC	5 cut(s)	11, 851, 1664, 1671, 1859
BspMAI	CTGCAG	2 cut(s)	1317, 1747
BspPI	GGATC	2 cut(s)	248, 1935
BspT104I	TTCGAA	1 cut(s)	2099
BspTNI	GGTCTC	3 cut(s)	1926, 2080, 2126
BsrDI	GCAATG	1 cut(s)	323
BsrGI	TGTACA	1 cut(s)	520
BsrI	ACTGG	6 cut(s)	46, 214, 1014, 1587, 1799, 2145
BssECI	CCNNGG	7 cut(s)	68, 272, 700, 1665, 1952, 2090, 2119
BssMI	GATC	4 cut(s)	253, 889, 1927, 1995
BssT1I	CCWWGG	3 cut(s)	272, 1952, 2090
Bst2UI	CCWGG	5 cut(s)	69, 78, 702, 1667, 2120
Bst4CI	ACNGT	4 cut(s)	157, 184, 1493, 1919
Bst6I	CTCTTC	5 cut(s)	804, 1202, 1293, 1785, 2124
BstAUI	TGTACA	1 cut(s)	520
BstBI	TTCGAA	1 cut(s)	2099
BstC8I	GCNNGC	4 cut(s)	57, 738, 842, 2192
BstDEI	CTNAG	6 cut(s)	138, 462, 727, 1020, 1243, 2166
BstDSI	CCRYGG	1 cut(s)	2090
BstENI	CCTNNNNNAGG	1 cut(s)	2123
BstF5I	GGATG	6 cut(s)	757, 1021, 1168, 1636, 1987, 2262
BstH2I	RGCGCY	2 cut(s)	280, 734
BstHHI	GCGC	2 cut(s)	279, 733
BstKTI	GATC	4 cut(s)	256, 892, 1930, 1998
BstMAI	GTCTC	8 cut(s)	750, 897, 1046, 1213, 1926, 2080, 2126, 2279
BstMBI	GATC	4 cut(s)	253, 889, 1927, 1995
BstMWI	GCNNNNNNNGC	7 cut(s)	458, 737, 1315, 1382, 1748, 1757, 2200
BstNI	CCWGG	5 cut(s)	69, 78, 702, 1667, 2120
BstNSI	RCATGY	2 cut(s)	2177, 2194
BstSCI	CCNGG	8 cut(s)	31, 67, 76, 615, 700, 1665, 1848, 2118
BstSFI	CTRYAG	4 cut(s)	1313, 1697, 1743, 2195
BstSLI	GKGCMC	3 cut(s)	61, 484, 1555
BstV2I	GAAGAC	5 cut(s)	323, 428, 606, 1245, 1913
BstX2I	RGATCY	1 cut(s)	253
BstXI	CCANNNNNNTGG	1 cut(s)	221
BstYI	RGATCY	1 cut(s)	253
Bsu15I	ATCGAT	1 cut(s)	1998
BsuRI	GGCC	4 cut(s)	112, 1350, 1578, 1663
BsuTUI	ATCGAT	1 cut(s)	1998
BtgI	CCRYGG	1 cut(s)	2090
BtgZI	GCGATG	1 cut(s)	1955
BtsCI	GGATG	6 cut(s)	757, 1021, 1168, 1636, 1987, 2262
BtsI	GCAGTG	1 cut(s)	1555
BtsIMutI	CAGTG	4 cut(s)	153, 1498, 1555, 2138
Cac8I	GCNNGC	4 cut(s)	57, 738, 842, 2192
CaiI	CAGNNNCTG	3 cut(s)	701, 1523, 1751
CciI	TCATGA	1 cut(s)	1450
CfoI	GCGC	2 cut(s)	279, 733
Cfr13I	GGNCC	5 cut(s)	9, 224, 361, 1662, 1858
ClaI	ATCGAT	1 cut(s)	1998
CseI	GACGC	1 cut(s)	317
Csp6I	GTAC	7 cut(s)	267, 503, 521, 711, 980, 1599, 2163
CviQI	GTAC	7 cut(s)	267, 503, 521, 711, 980, 1599, 2163
DdeI	CTNAG	6 cut(s)	138, 462, 727, 1020, 1243, 2166
DpnI	GATC	4 cut(s)	255, 891, 1929, 1997
DpnII	GATC	4 cut(s)	253, 889, 1927, 1995
DraI	TTTAAA	1 cut(s)	372
EaeI	YGGCCR	1 cut(s)	1348
Eam1104I	CTCTTC	5 cut(s)	804, 1202, 1293, 1785, 2124
EarI	CTCTTC	5 cut(s)	804, 1202, 1293, 1785, 2124
EciI	GGCGGA	1 cut(s)	672
Eco130I	CCWWGG	3 cut(s)	272, 1952, 2090
Eco24I	GRGCYC	1 cut(s)	854
Eco31I	GGTCTC	3 cut(s)	1926, 2080, 2126
Eco47I	GGWCC	4 cut(s)	9, 224, 361, 1858
Eco47III	AGCGCT	1 cut(s)	732
Eco57I	CTGAAG	6 cut(s)	35, 327, 474, 1317, 1407, 1500
EcoNI	CCTNNNNNAGG	1 cut(s)	2123
EcoO109I	RGGNCCY	2 cut(s)	361, 1662
EcoRI	GAATTC	4 cut(s)	718, 1391, 1754, 2114
EcoRII	CCWGG	5 cut(s)	67, 76, 700, 1665, 2118
EcoT14I	CCWWGG	3 cut(s)	272, 1952, 2090
EcoT22I	ATGCAT	1 cut(s)	1333
EcoT38I	GRGCYC	1 cut(s)	854
ErhI	CCWWGG	3 cut(s)	272, 1952, 2090
FalI	AAGNNNNNCTT	2 cut(s)	300, 332
FaqI	GGGAC	3 cut(s)	1486, 1735, 1871
FblI	GTMKAC	1 cut(s)	1822
FokI	GGATG	6 cut(s)	764, 1028, 1175, 1643, 1994, 2269
FriOI	GRGCYC	1 cut(s)	854
FspBI	CTAG	7 cut(s)	273, 485, 714, 819, 1779, 1887, 2160
GlaI	GCGC	2 cut(s)	278, 732
GsaI	CCCAGC	1 cut(s)	1559
GsuI	CTGGAG	5 cut(s)	99, 117, 197, 422, 1031
HaeII	RGCGCY	2 cut(s)	280, 734
HaeIII	GGCC	4 cut(s)	112, 1350, 1578, 1663
HapII	CCGG	3 cut(s)	32, 616, 1849
HgaI	GACGC	1 cut(s)	317
HhaI	GCGC	2 cut(s)	279, 733
Hin6I	GCGC	2 cut(s)	277, 731
HinP1I	GCGC	2 cut(s)	277, 731
HincII	GTYRAC	1 cut(s)	1506
HindII	GTYRAC	1 cut(s)	1506
HindIII	AAGCTT	2 cut(s)	632, 1973
HpaII	CCGG	3 cut(s)	32, 616, 1849
HphI	GGTGA	5 cut(s)	482, 716, 1451, 1478, 1880
Hpy166II	GTNNAC	5 cut(s)	187, 224, 482, 1506, 1823
Hpy188I	TCNGA	5 cut(s)	9, 763, 894, 1531, 1884
Hpy8I	GTNNAC	5 cut(s)	187, 224, 482, 1506, 1823
HpyAV	CCTTC	9 cut(s)	302, 516, 525, 979, 985, 1090, 1620, 1804, 2272
HpyCH4III	ACNGT	4 cut(s)	157, 184, 1493, 1919
HpyCH4IV	ACGT	4 cut(s)	244, 489, 1597, 1825
HpyF10VI	GCNNNNNNNGC	7 cut(s)	458, 737, 1315, 1382, 1748, 1757, 2200
HpyF3I	CTNAG	6 cut(s)	138, 462, 727, 1020, 1243, 2166
HpySE526I	ACGT	4 cut(s)	244, 489, 1597, 1825
HspAI	GCGC	2 cut(s)	277, 731
Kzo9I	GATC	4 cut(s)	253, 889, 1927, 1995
LmnI	GCTCC	8 cut(s)	35, 849, 876, 897, 934, 994, 1732, 2180
LweI	GCATC	9 cut(s)	775, 1006, 1033, 1270, 1318, 1535, 1627, 1972, 2247
MaeI	CTAG	7 cut(s)	273, 485, 714, 819, 1779, 1887, 2160
MaeII	ACGT	4 cut(s)	244, 489, 1597, 1825
MaeIII	GTNAC	6 cut(s)	127, 554, 589, 821, 1487, 1801
MalI	GATC	4 cut(s)	255, 891, 1929, 1997
MboI	GATC	4 cut(s)	253, 889, 1927, 1995
MflI	RGATCY	1 cut(s)	253
MhlI	GDGCHC	6 cut(s)	61, 250, 484, 854, 1555, 1899
MlsI	TGGCCA	1 cut(s)	1350
MluNI	TGGCCA	1 cut(s)	1350
MlyI	GAGTC	4 cut(s)	521, 752, 1511, 1868
MmeI	TCCRAC	4 cut(s)	218, 1179, 1732, 2158
Mox20I	TGGCCA	1 cut(s)	1350
Mph1103I	ATGCAT	1 cut(s)	1333
MroXI	GAANNNNTTC	1 cut(s)	312
MscI	TGGCCA	1 cut(s)	1350
MseI	TTAA	5 cut(s)	371, 378, 414, 2274, 2314
MslI	CAYNNNNRTG	2 cut(s)	1029, 1464
Msp20I	TGGCCA	1 cut(s)	1350
MspA1I	CMGCKG	6 cut(s)	137, 461, 1312, 1604, 1748, 2200
MspI	CCGG	3 cut(s)	32, 616, 1849
MspR9I	CCNGG	8 cut(s)	33, 69, 78, 617, 702, 1667, 1850, 2120
MvaI	CCWGG	5 cut(s)	69, 78, 702, 1667, 2120
MwoI	GCNNNNNNNGC	7 cut(s)	458, 737, 1315, 1382, 1748, 1757, 2200
NciI	CCSGG	3 cut(s)	33, 617, 1850
NcoI	CCATGG	1 cut(s)	2090
NdeII	GATC	4 cut(s)	253, 889, 1927, 1995
NlaIV	GGNNCC	5 cut(s)	11, 851, 1664, 1671, 1859
NmuCI	GTSAC	3 cut(s)	127, 589, 821
NsiI	ATGCAT	1 cut(s)	1333
NspI	RCATGY	2 cut(s)	2177, 2194
NspV	TTCGAA	1 cut(s)	2099
PaeI	GCATGC	1 cut(s)	2194
PagI	TCATGA	1 cut(s)	1450
PciI	ACATGT	1 cut(s)	2173
PcsI	WCGNNNNNNNCGW	2 cut(s)	325, 2226
PdmI	GAANNNNTTC	1 cut(s)	312
PfeI	GAWTC	9 cut(s)	4, 73, 115, 299, 1169, 1340, 1442, 1456, 2005
PflMI	CCANNNNNTGG	2 cut(s)	701, 1718
PfoI	TCCNGGA	1 cut(s)	76
PleI	GAGTC	4 cut(s)	521, 752, 1510, 1868
PpsI	GAGTC	4 cut(s)	521, 752, 1510, 1868
PpuMI	RGGWCCY	1 cut(s)	361
PscI	ACATGT	1 cut(s)	2173
Psp5II	RGGWCCY	1 cut(s)	361
Psp6I	CCWGG	5 cut(s)	67, 76, 700, 1665, 2118
PspFI	CCCAGC	1 cut(s)	1555
PspGI	CCWGG	5 cut(s)	67, 76, 700, 1665, 2118
PspN4I	GGNNCC	5 cut(s)	11, 851, 1664, 1671, 1859
PspPI	GGNCC	5 cut(s)	9, 224, 361, 1662, 1858
PspPPI	RGGWCCY	1 cut(s)	361
PsrI	GAACNNNNNNTAC	2 cut(s)	2178, 2210
PstI	CTGCAG	2 cut(s)	1317, 1747
PstNI	CAGNNNCTG	3 cut(s)	701, 1523, 1751
PsuI	RGATCY	1 cut(s)	253
PvuII	CAGCTG	4 cut(s)	137, 461, 1312, 2200
RsaI	GTAC	7 cut(s)	268, 504, 522, 712, 981, 1600, 2164
RsaNI	GTAC	7 cut(s)	267, 503, 521, 711, 980, 1599, 2163
RseI	CAYNNNNRTG	2 cut(s)	1029, 1464
SaqAI	TTAA	5 cut(s)	371, 378, 414, 2274, 2314
Sau3AI	GATC	4 cut(s)	253, 889, 1927, 1995
Sau96I	GGNCC	5 cut(s)	9, 224, 361, 1662, 1858
ScaI	AGTACT	1 cut(s)	2164
SchI	GAGTC	4 cut(s)	521, 752, 1511, 1868
ScrFI	CCNGG	8 cut(s)	33, 69, 78, 617, 702, 1667, 1850, 2120
SduI	GDGCHC	6 cut(s)	61, 250, 484, 854, 1555, 1899
SfaNI	GCATC	9 cut(s)	775, 1006, 1033, 1270, 1318, 1535, 1627, 1972, 2247
SfcI	CTRYAG	4 cut(s)	1313, 1697, 1743, 2195
SfuI	TTCGAA	1 cut(s)	2099
SinI	GGWCC	4 cut(s)	9, 224, 361, 1858
SmiMI	CAYNNNNRTG	2 cut(s)	1029, 1464
SmlI	CTYRAG	2 cut(s)	249, 2243
SmoI	CTYRAG	2 cut(s)	249, 2243
SpeI	ACTAGT	1 cut(s)	818
SphI	GCATGC	1 cut(s)	2194
SsiI	CCGC	4 cut(s)	683, 1535, 1602, 1748
SspMI	CTAG	7 cut(s)	273, 485, 714, 819, 1779, 1887, 2160
StyD4I	CCNGG	8 cut(s)	31, 67, 76, 615, 700, 1665, 1848, 2118
StyI	CCWWGG	3 cut(s)	272, 1952, 2090
TaaI	ACNGT	4 cut(s)	157, 184, 1493, 1919
TaiI	ACGT	4 cut(s)	247, 492, 1600, 1828
TaqI	TCGA	5 cut(s)	551, 1930, 1998, 2099, 2283
TatI	WGTACW	2 cut(s)	520, 2162
TauI	GCSGC	1 cut(s)	1751
TfiI	GAWTC	9 cut(s)	4, 73, 115, 299, 1169, 1340, 1442, 1456, 2005
Tru1I	TTAA	5 cut(s)	371, 378, 414, 2274, 2314
Tru9I	TTAA	5 cut(s)	371, 378, 414, 2274, 2314
TscAI	CASTG	4 cut(s)	160, 1498, 1555, 2145
TseFI	GTSAC	3 cut(s)	127, 589, 821
Tsp45I	GTSAC	3 cut(s)	127, 589, 821
TspGWI	ACGGA	4 cut(s)	997, 1141, 1940, 2126
TspRI	CASTG	4 cut(s)	160, 1498, 1555, 2145
Van91I	CCANNNNNTGG	2 cut(s)	701, 1718
VneI	GTGCAC	1 cut(s)	480
VpaK11BI	GGWCC	4 cut(s)	9, 224, 361, 1858
XagI	CCTNNNNNAGG	1 cut(s)	2123
XapI	RAATTY	7 cut(s)	194, 293, 718, 1391, 1735, 1754, 2114
XceI	RCATGY	2 cut(s)	2177, 2194
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1358, 1715
XmaJI	CCTAGG	1 cut(s)	272
XmiI	GTMKAC	1 cut(s)	1822
XmnI	GAANNNNTTC	1 cut(s)	312
XspI	CTAG	7 cut(s)	273, 485, 714, 819, 1779, 1887, 2160
ZrmI	AGTACT	1 cut(s)	2164
Zsp2I	ATGCAT	1 cut(s)	1333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.