Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0005357

Physical Location & Seq

Genomic Coordinates Reverse (-)

5264234 .. 5269372

Gene Structure 5139 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g07940.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3006 bp

ATGTCACGCTTCCGGAACACTAACCCGTGTAATTCGTACATAAACTCTCCCCTTGTTCTCTCTCTGTCACTATCCTTCTCCTTGTTTCTCTCTCCTAGGGCACGAAAACAGCAAAAATTCACCCACAGATTTCAATTCTTTCTAGCCATGGCGGACGCTCCTTCCTCTCCCGCCACAAACCCACTGTCCAATCCCCAATCCGGTAACCCTAATCCCCAATCTAACCAACCTGATCCCGTACCCGCCTCCACCACACCACCACCACCACCATCACAATCATCGTCGTTATCATCCACACCTATCACCGTAAACCCTGATTCGAATCCGCCTCTAGTATCTCTGCCGCCTCCACCGTCACATCCTTCGATCTCCTTCGTGCCACAACAGGTTTCCGGCGCCTTACCGCCGGTCGCGCCGTCTTTCCGGCCGGTTCCACAGTTCACTCCAATACTGAACCCCGGTGTGCCCAATCCGAATTATCAAATCCCCGGTGTCCAGCCGCCTGGTGTGAGCTCCGGAGCTCCGATGGCTCCTGGTGTGCCCCCGCCGTCCTCGGCCCCGCAGAATATGATGCATTATCAGATGCAGCCTATGAGACCGTACGCACCGATGCCTAATGGATACGCACCCATGTCCACTGGTGCTCCTCAAGGCGCCTTACCTGGACTTCCTCGTTATCCTTCATATCATCCAATGATTCGGACCCCGTTTCCTCCACGCCCACTGGGAGCAACTGGTTTGCTTCAGCGTGCCCCTGTTCCTGGGATTCCTGGAGTTCGCCCGATTATCCCTCCTGTTGTTAGGCCAATTCTTCCTATTGTCGCTCCAGCTGAGAAACCACAAACCACTGTTTATGTTGGGAAGATAGCACCAACAGTGGACAATGAATTTATGAAATATCTCCTCCAGTTGTGTGGACCTGTCAAGAGTTGGAAACGTGCTCAAGATCCCACAGATGGGACTCCTAGGCGCTTTGGGTTCTGCGAATTTGAATCTGCTGAAGGGGTTCTTCGGGCATTGCGTCTTCTCACTAATTTGAGCATTGATGGGCAGGACCTTGTGTTAAATGTTAATCAAGCAACAAGAGAGTATCTGGAGAGGGTTGTTAAAAAGAAGACTGAAAACTCAAAGAAGCTCAAAGAAGCTGAAGCAGCTGAGAAAGGTGATGGAAGTGCACTAGACGTTGAGAAGAATGTACCTTCAATTCCTTCTGTACAAAACTCAAAGGAGGAAGATGGTAATTCGAGTAACAAAGAAAATGACCCTGCCAATTTTGGAGTTGTGACTGACGAAGACAAGGAAGCTGACCGGGAGGCTATGGAGAAGCTTACAAGTTTGATAGAGGAGAGAATAAAAAACAAACCTCTCCCTCCTCCGCCACCTACACCAGCCCCTGGTGATGGTACTAGGAATTCAAACTCAGCGCTGCCAGCTAAATCAAGGGATGGAGACTCTGATGTTGATATAACAAGAAATGATGCTTATGAAAAATTTGATGAAGAGATAACTAGTGACAACAAAACAAGAAGTGAGCAGGGGAGCCCTGAAACAAGCTCACATGATAGGAGCAGAAAGCAAGATCGGAGGAGCAGAGACAATGAGCGAGATATGAAACGGGAAAAGGAGCATGAGATTGAAAGATACGAAAGAGAAACAGAGCGAGAACGGGTACGGAAGGAGAAGGAGCAAAGGAGAAAACTGGAGGATGCGGAGCATCAGTATGAAAAATTTCTCAAAGATTGGGAGTATAGGGAAAGGGAGAAAGAGAAACAGAGGCAGTATGAGAAGGAGAGGGAGAAAGAGAGGGAACGCAAACGGAGGAAAGAGGTAATTTATGAAGAAGATGATGAGGATGAAGATTCCAGAAAAAAATGGAGGAGAAGTGCGTTGGAGGAGAAGAGAAAGAGGAGACTACGGGAGAAAGAAGATGACTTAGCTGACAGGCAGAAAGAGGAAGAAGAAATTGCTGAGGCCAGAAGGAGGGCTGAAGAGGAAAAGCAGCTGCAGCAAGAGAGAGATGCATTGAGGGATTCATCTGGTCATGTTGCAAATGGAAGCGAAAAAGCTGCTTTGGCTGAAGAATTCGTTGTGCAACTGAAAGATAAGGCAACTGAACAGGATAATGGGGGTGATTCTGGTCATGAGAATCATATAGGTGATGGGACTCTACAAAATGGTAACAGTGGTGATGAGTCAACCATGACATCAGTTTCTGCATCAGAACCGCAGCAGAGTGGCAGTGCCCCTGCAAAGAAGTTGGGTTTTGGCCTACTGGGTTCTGGAAAACGTACCGCTGTTCCTTCTGTTTTCAATGAGGAGGATGATGATGCACACAAGGACAAAAAAATGAGGCCCCTGGTTCCCATTGATTATTCAACGGAAGAACTACAGGCTGTCCAACCAATTTCTGGGACAGCTCCATCAAATTTGGCTGCAGCGGCTGAATTCGCAAAGCGAATATCAAATGCTAGTTCTAAAGAAGAGAAGCCAGTTACAGAGAAGGAAAGAAGTAGACGTTCTAATGATAGGTCAAGCCACCGGGATAGGGACCAGAATGGTGATGAGTCTAATCGGACTAGAGATGAGCATAAGGAGAAGACTATTGACCGTGATACGGATCGTGACCATGCGATGAATAAACCAAGGGCAAAGGATAATAAGAAGCTTTTGGATGCAAAACAACTGATCGATATGATTCCAAAGACAAAGGAGGAATTATTCTCCTATGAAATAAATTGGGCTATTTATGAACATCATGCACTACATGAACGCATGAGACCATGGATTTCGAAGAAGATTACGGAATTCCTGGGAGAGGAAGAGACCACACTTGTAGATTACATTGTATCTAGTACTCAGGAACATGTTGGAGCAGAACGCATGCTGCAGCTGCTTCAATCCATTTTAGACGAAGAAGCCGAAATGTTTGTTCTCAAGATGTGGAGGATGCTCATCTTTGAAATTAAGAAGGTCGAGACAGGTCTGGCTTCAAGAACAAGAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000381 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0008150 GO:0010468 GO:0010941 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0042981 GO:0043067 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:1901363 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PWI RRM_1

Protein Analysis

1002

Amino Acids

112.82

Weight (kDa)

6.07

Isoelectric Point (pI)

62.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60200 AT1G60200 AT1G60200 AT1G60200
fragaria_vesca	FvH4_4g34570 FvH4_4g34571 FvH4_4g34571 FvH4_4g34571 FvH4_4g34571
malus_domestica	MD13G1091200.v1.1 MD16G1091700.v1.1
prunus_persica	Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1
pyrus_communis	pycom13g07940 pycom16g07830
rosa_chinensis	RchiOBHm_Chr4g0443951
rosa_laevigata	RLG00000005874
rosa_multiflora	Rmu_sc0011390.1_g000002
rosa_roxburghii	Rroxscaffold_5G00384490
rosa_rugosa	Rorug04G0348500 Rorug04G0348500
rosa_samantha	Rh4AG409100 Rh4BG420200 Rh4CG434200 Rh4DG415200
rosa_wichuraiana	Rw4G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	395, 653
AccB7I	CCANNNNNTGG	2 cut(s)	1394, 2408
AccI	GTMKAC	1 cut(s)	2512
AccII	CGCG	1 cut(s)	413
AccIII	TCCGGA	2 cut(s)	12, 515
AclWI	GGATC	3 cut(s)	227, 941, 2625
AcoI	YGGCCR	1 cut(s)	425
AcuI	CTGAAG	5 cut(s)	728, 1020, 1167, 2007, 2097
AcyI	GRCGYC	2 cut(s)	396, 654
AfaI	GTAC	9 cut(s)	38, 240, 602, 1197, 1215, 1405, 1671, 2290, 2854
AfeI	AGCGCT	1 cut(s)	1425
AflIII	ACRYGT	1 cut(s)	2863
AhlI	ACTAGT	1 cut(s)	1508
AjnI	CCWGG	8 cut(s)	502, 532, 661, 760, 769, 1393, 2355, 2808
Alw21I	GWGCWC	5 cut(s)	515, 523, 646, 943, 1177
Alw26I	GTCTC	7 cut(s)	589, 1443, 1587, 1903, 2770, 2816, 2969
Alw44I	GTGCAC	1 cut(s)	1173
AlwI	GGATC	3 cut(s)	227, 941, 2625
AlwNI	CAGNNNCTG	3 cut(s)	1394, 2213, 2441
Aor13HI	TCCGGA	2 cut(s)	12, 515
Aor51HI	AGCGCT	1 cut(s)	1425
AoxI	GGCC	6 cut(s)	425, 555, 803, 1971, 2266, 2351
ApaLI	GTGCAC	1 cut(s)	1173
ArsI	GACNNNNNNTTYG	2 cut(s)	170, 202
Asp700I	GAANNNNTTC	2 cut(s)	1005, 1728
AspA2I	CCTAGG	2 cut(s)	95, 965
AspLEI	GCGC	5 cut(s)	398, 415, 656, 972, 1426
AspS9I	GGNCC	6 cut(s)	556, 702, 917, 1054, 2352, 2548
AsuC2I	CCSGG	4 cut(s)	459, 489, 1310, 2540
AsuHPI	GGTGA	8 cut(s)	112, 295, 1175, 1409, 2141, 2168, 2198, 2570
AsuII	TTCGAA	2 cut(s)	320, 2789
AvaII	GGWCC	4 cut(s)	702, 917, 1054, 2548
AvrII	CCTAGG	2 cut(s)	95, 965
BaeGI	GKGCMC	6 cut(s)	103, 468, 543, 754, 1177, 2245
BanI	GGYRCC	2 cut(s)	395, 653
BanII	GRGCYC	3 cut(s)	515, 523, 1544
BbsI	GAAGAC	4 cut(s)	1016, 1121, 1299, 2603
Bbv12I	GWGCWC	5 cut(s)	515, 523, 646, 943, 1177
BbvCI	CCTCAGC	1 cut(s)	1968
BceAI	ACGGC	2 cut(s)	400, 532
BcgI	CGANNNNNNTGC	2 cut(s)	2048, 2082
BciT130I	CCWGG	8 cut(s)	504, 534, 663, 762, 771, 1395, 2357, 2810
BciVI	GTATCC	1 cut(s)	614
BcnI	CCSGG	4 cut(s)	459, 489, 1310, 2540
BcoDI	GTCTC	7 cut(s)	589, 1443, 1587, 1903, 2770, 2816, 2969
BcuI	ACTAGT	1 cut(s)	1508
BfmI	CTRYAG	4 cut(s)	2003, 2387, 2433, 2885
BfoI	RGCGCY	4 cut(s)	399, 657, 973, 1427
BfuI	GTATCC	1 cut(s)	614
BlnI	CCTAGG	2 cut(s)	95, 965
BmcAI	AGTACT	1 cut(s)	2854
Bme18I	GGWCC	4 cut(s)	702, 917, 1054, 2548
BmgT120I	GGNCC	6 cut(s)	556, 702, 917, 1054, 2352, 2548
BmrI	ACTGGG	2 cut(s)	734, 2282
BmuI	ACTGGG	2 cut(s)	734, 2282
BpiI	GAAGAC	4 cut(s)	1016, 1121, 1299, 2603
BpmI	CTGGAG	5 cut(s)	792, 810, 890, 1115, 1721
Bpu10I	CCTNAGC	1 cut(s)	1968
Bpu14I	TTCGAA	2 cut(s)	320, 2789
BpuEI	CTTGAG	3 cut(s)	633, 927, 2918
BpuMI	CCSGG	4 cut(s)	459, 489, 1310, 2540
Bsa29I	ATCGAT	1 cut(s)	2688
BsaBI	GATNNNNATC	3 cut(s)	321, 2616, 2951
BsaHI	GRCGYC	2 cut(s)	396, 654
BsaI	GGTCTC	3 cut(s)	589, 2770, 2816
BsaWI	WCCGGW	3 cut(s)	12, 200, 515
BsaXI	ACNNNNNCTCC	6 cut(s)	628, 658, 1703, 1733, 1867, 1897
Bse118I	RCCGGY	2 cut(s)	406, 427
Bse1I	ACTGG	7 cut(s)	643, 729, 739, 907, 1704, 2277, 2489
Bse3DI	GCAATG	1 cut(s)	1016
Bse8I	GATNNNNATC	3 cut(s)	321, 2616, 2951
BseAI	TCCGGA	2 cut(s)	12, 515
BseBI	CCWGG	8 cut(s)	504, 534, 663, 762, 771, 1395, 2357, 2810
BseCI	ATCGAT	1 cut(s)	2688
BseGI	GGATG	9 cut(s)	290, 358, 688, 1450, 1711, 1858, 2326, 2677, 2952
BseJI	GATNNNNATC	3 cut(s)	321, 2616, 2951
BseMI	GCAATG	1 cut(s)	1016
BseMII	CTCAG	5 cut(s)	822, 1146, 1434, 1959, 2870
BseNI	ACTGG	7 cut(s)	643, 729, 739, 907, 1704, 2277, 2489
BseRI	GAGGAG	9 cut(s)	636, 893, 1358, 1362, 1600, 1891, 1907, 1921, 2330
BseSI	GKGCMC	6 cut(s)	103, 468, 543, 754, 1177, 2245
BseX3I	CGGCCG	1 cut(s)	425
Bsh1236I	CGCG	1 cut(s)	413
Bsh1285I	CGRYCG	2 cut(s)	411, 428
BshFI	GGCC	6 cut(s)	427, 557, 805, 1973, 2268, 2353
BshNI	GGYRCC	2 cut(s)	395, 653
BshVI	ATCGAT	1 cut(s)	2688
BsiEI	CGRYCG	2 cut(s)	411, 428
BsiHKAI	GWGCWC	5 cut(s)	515, 523, 646, 943, 1177
BsiWI	CGTACG	1 cut(s)	600
BslFI	GGGAC	4 cut(s)	973, 2176, 2425, 2561
BsmAI	GTCTC	7 cut(s)	589, 1443, 1587, 1903, 2770, 2816, 2969
BsmFI	GGGAC	4 cut(s)	973, 2176, 2425, 2561
BsnI	GGCC	6 cut(s)	427, 557, 805, 1973, 2268, 2353
Bso31I	GGTCTC	3 cut(s)	589, 2770, 2816
Bsp119I	TTCGAA	2 cut(s)	320, 2789
Bsp13I	TCCGGA	2 cut(s)	12, 515
Bsp1407I	TGTACA	1 cut(s)	1213
Bsp143I	GATC	6 cut(s)	232, 366, 946, 1579, 2617, 2685
Bsp19I	CCATGG	2 cut(s)	147, 2780
BspANI	GGCC	6 cut(s)	427, 557, 805, 1973, 2268, 2353
BspCNI	CTCAG	5 cut(s)	823, 1147, 1433, 1960, 2869
BspDI	ATCGAT	1 cut(s)	2688
BspEI	TCCGGA	2 cut(s)	12, 515
BspFNI	CGCG	1 cut(s)	413
BspHI	TCATGA	1 cut(s)	2140
BspMAI	CTGCAG	3 cut(s)	2007, 2437, 2889
BspPI	GGATC	3 cut(s)	227, 941, 2625
BspT104I	TTCGAA	2 cut(s)	320, 2789
BspT107I	GGYRCC	2 cut(s)	395, 653
BspTNI	GGTCTC	3 cut(s)	589, 2770, 2816
BsrDI	GCAATG	1 cut(s)	1016
BsrFI	RCCGGY	2 cut(s)	406, 427
BsrGI	TGTACA	1 cut(s)	1213
BsrI	ACTGG	7 cut(s)	643, 729, 739, 907, 1704, 2277, 2489
BssAI	RCCGGY	2 cut(s)	406, 427
BssMI	GATC	6 cut(s)	232, 366, 946, 1579, 2617, 2685
BssNI	GRCGYC	2 cut(s)	396, 654
BssT1I	CCWWGG	5 cut(s)	95, 147, 965, 2642, 2780
Bst2UI	CCWGG	8 cut(s)	504, 534, 663, 762, 771, 1395, 2357, 2810
Bst4CI	ACNGT	9 cut(s)	186, 307, 354, 438, 600, 850, 877, 2183, 2609
Bst6I	CTCTTC	5 cut(s)	1494, 1892, 1983, 2475, 2814
BstACI	GRCGYC	2 cut(s)	396, 654
BstAUI	TGTACA	1 cut(s)	1213
BstBI	TTCGAA	2 cut(s)	320, 2789
BstC8I	GCNNGC	3 cut(s)	750, 1431, 2882
BstDEI	CTNAG	6 cut(s)	831, 1155, 1420, 1933, 1968, 2856
BstDSI	CCRYGG	2 cut(s)	147, 2780
BstEII	GGTNACC	1 cut(s)	203
BstENI	CCTNNNNNAGG	1 cut(s)	2813
BstF5I	GGATG	9 cut(s)	290, 358, 688, 1450, 1711, 1858, 2326, 2677, 2952
BstFNI	CGCG	1 cut(s)	413
BstH2I	RGCGCY	4 cut(s)	399, 657, 973, 1427
BstHHI	GCGC	5 cut(s)	398, 415, 656, 972, 1426
BstKTI	GATC	6 cut(s)	235, 369, 949, 1582, 2620, 2688
BstMAI	GTCTC	7 cut(s)	589, 1443, 1587, 1903, 2770, 2816, 2969
BstMBI	GATC	6 cut(s)	232, 366, 946, 1579, 2617, 2685
BstMCI	CGRYCG	2 cut(s)	411, 428
BstMWI	GCNNNNNNNGC	9 cut(s)	412, 527, 1151, 1430, 2005, 2072, 2438, 2447, 2890
BstNI	CCWGG	8 cut(s)	504, 534, 663, 762, 771, 1395, 2357, 2810
BstNSI	RCATGY	2 cut(s)	2867, 2884
BstPI	GGTNACC	1 cut(s)	203
BstSFI	CTRYAG	4 cut(s)	2003, 2387, 2433, 2885
BstSLI	GKGCMC	6 cut(s)	103, 468, 543, 754, 1177, 2245
BstUI	CGCG	1 cut(s)	413
BstV2I	GAAGAC	4 cut(s)	1016, 1121, 1299, 2603
BstX2I	RGATCY	1 cut(s)	946
BstXI	CCANNNNNNTGG	2 cut(s)	503, 914
BstYI	RGATCY	1 cut(s)	946
BstZI	CGGCCG	1 cut(s)	425
Bsu15I	ATCGAT	1 cut(s)	2688
BsuI	GTATCC	1 cut(s)	614
BsuRI	GGCC	6 cut(s)	427, 557, 805, 1973, 2268, 2353
BsuTUI	ATCGAT	1 cut(s)	2688
BtgI	CCRYGG	2 cut(s)	147, 2780
BtgZI	GCGATG	1 cut(s)	2645
BtsCI	GGATG	9 cut(s)	290, 358, 688, 1450, 1711, 1858, 2326, 2677, 2952
BtsI	GCAGTG	1 cut(s)	2245
BtsIMutI	CAGTG	7 cut(s)	182, 636, 722, 846, 882, 2188, 2245
Cac8I	GCNNGC	3 cut(s)	750, 1431, 2882
CaiI	CAGNNNCTG	3 cut(s)	1394, 2213, 2441
CciI	TCATGA	1 cut(s)	2140
CfoI	GCGC	5 cut(s)	398, 415, 656, 972, 1426
Cfr10I	RCCGGY	2 cut(s)	406, 427
Cfr13I	GGNCC	6 cut(s)	556, 702, 917, 1054, 2352, 2548
ClaI	ATCGAT	1 cut(s)	2688
CseI	GACGC	2 cut(s)	164, 1010
Csp6I	GTAC	9 cut(s)	37, 239, 601, 1196, 1214, 1404, 1670, 2289, 2853
CviQI	GTAC	9 cut(s)	37, 239, 601, 1196, 1214, 1404, 1670, 2289, 2853
DdeI	CTNAG	6 cut(s)	831, 1155, 1420, 1933, 1968, 2856
DinI	GGCGCC	2 cut(s)	397, 655
DpnI	GATC	6 cut(s)	234, 368, 948, 1581, 2619, 2687
DpnII	GATC	6 cut(s)	232, 366, 946, 1579, 2617, 2685
EaeI	YGGCCR	1 cut(s)	425
EagI	CGGCCG	1 cut(s)	425
Eam1104I	CTCTTC	5 cut(s)	1494, 1892, 1983, 2475, 2814
EarI	CTCTTC	5 cut(s)	1494, 1892, 1983, 2475, 2814
EciI	GGCGGA	3 cut(s)	167, 315, 1365
Ecl136II	GAGCTC	2 cut(s)	513, 521
EclXI	CGGCCG	1 cut(s)	425
Eco130I	CCWWGG	5 cut(s)	95, 147, 965, 2642, 2780
Eco24I	GRGCYC	3 cut(s)	515, 523, 1544
Eco31I	GGTCTC	3 cut(s)	589, 2770, 2816
Eco47I	GGWCC	4 cut(s)	702, 917, 1054, 2548
Eco47III	AGCGCT	1 cut(s)	1425
Eco52I	CGGCCG	1 cut(s)	425
Eco53kI	GAGCTC	2 cut(s)	513, 521
Eco57I	CTGAAG	5 cut(s)	728, 1020, 1167, 2007, 2097
Eco91I	GGTNACC	1 cut(s)	203
EcoICRI	GAGCTC	2 cut(s)	513, 521
EcoNI	CCTNNNNNAGG	1 cut(s)	2813
EcoO109I	RGGNCCY	2 cut(s)	1054, 2352
EcoO65I	GGTNACC	1 cut(s)	203
EcoRI	GAATTC	4 cut(s)	1411, 2081, 2444, 2804
EcoRII	CCWGG	8 cut(s)	502, 532, 661, 760, 769, 1393, 2355, 2808
EcoT14I	CCWWGG	5 cut(s)	95, 147, 965, 2642, 2780
EcoT22I	ATGCAT	2 cut(s)	576, 2023
EcoT38I	GRGCYC	3 cut(s)	515, 523, 1544
EgeI	GGCGCC	2 cut(s)	397, 655
EheI	GGCGCC	2 cut(s)	397, 655
ErhI	CCWWGG	5 cut(s)	95, 147, 965, 2642, 2780
FalI	AAGNNNNNCTT	2 cut(s)	993, 1025
FaqI	GGGAC	4 cut(s)	973, 2176, 2425, 2561
FauI	CCCGC	4 cut(s)	178, 250, 552, 567
FblI	GTMKAC	1 cut(s)	2512
FokI	GGATG	9 cut(s)	277, 345, 675, 1457, 1718, 1865, 2333, 2684, 2959
FriOI	GRGCYC	3 cut(s)	515, 523, 1544
GlaI	GCGC	5 cut(s)	397, 414, 655, 971, 1425
GsuI	CTGGAG	5 cut(s)	792, 810, 890, 1115, 1721
HaeII	RGCGCY	4 cut(s)	399, 657, 973, 1427
HaeIII	GGCC	6 cut(s)	427, 557, 805, 1973, 2268, 2353
HgaI	GACGC	2 cut(s)	164, 1010
HhaI	GCGC	5 cut(s)	398, 415, 656, 972, 1426
Hin1I	GRCGYC	2 cut(s)	396, 654
Hin6I	GCGC	5 cut(s)	396, 413, 654, 970, 1424
HinP1I	GCGC	5 cut(s)	396, 413, 654, 970, 1424
HincII	GTYRAC	1 cut(s)	2196
HindII	GTYRAC	1 cut(s)	2196
HindIII	AAGCTT	2 cut(s)	1325, 2663
HphI	GGTGA	8 cut(s)	112, 295, 1175, 1409, 2141, 2168, 2198, 2570
Hpy166II	GTNNAC	8 cut(s)	310, 441, 636, 880, 917, 1175, 2196, 2513
Hpy188I	TCNGA	8 cut(s)	474, 525, 582, 702, 1456, 1584, 2221, 2574
Hpy8I	GTNNAC	8 cut(s)	310, 441, 636, 880, 917, 1175, 2196, 2513
Hpy99I	CGWCG	1 cut(s)	286
HpyCH4III	ACNGT	9 cut(s)	186, 307, 354, 438, 600, 850, 877, 2183, 2609
HpyCH4IV	ACGT	4 cut(s)	937, 1182, 2287, 2515
HpyF10VI	GCNNNNNNNGC	9 cut(s)	412, 527, 1151, 1430, 2005, 2072, 2438, 2447, 2890
HpyF3I	CTNAG	6 cut(s)	831, 1155, 1420, 1933, 1968, 2856
HpySE526I	ACGT	4 cut(s)	937, 1182, 2287, 2515
Hsp92I	GRCGYC	2 cut(s)	396, 654
HspAI	GCGC	5 cut(s)	396, 413, 654, 970, 1424
KasI	GGCGCC	2 cut(s)	395, 653
Kpn2I	TCCGGA	2 cut(s)	12, 515
Kzo9I	GATC	6 cut(s)	232, 366, 946, 1579, 2617, 2685
MaeII	ACGT	4 cut(s)	937, 1182, 2287, 2515
MalI	GATC	6 cut(s)	234, 368, 948, 1581, 2619, 2687
MboI	GATC	6 cut(s)	232, 366, 946, 1579, 2617, 2685
MflI	RGATCY	1 cut(s)	946
Mly113I	GGCGCC	2 cut(s)	396, 654
MlyI	GAGTC	5 cut(s)	955, 1445, 2158, 2201, 2573
MmeI	TCCRAC	4 cut(s)	911, 1869, 2422, 2848
Mph1103I	ATGCAT	2 cut(s)	576, 2023
MroI	TCCGGA	2 cut(s)	12, 515
MroXI	GAANNNNTTC	2 cut(s)	1005, 1728
MseI	TTAA	5 cut(s)	1064, 1071, 1107, 2964, 3004
MslI	CAYNNNNRTG	2 cut(s)	1719, 2154
MspA1I	CMGCKG	6 cut(s)	830, 1154, 2002, 2294, 2438, 2890
MvaI	CCWGG	8 cut(s)	504, 534, 663, 762, 771, 1395, 2357, 2810
MvnI	CGCG	1 cut(s)	413
MwoI	GCNNNNNNNGC	9 cut(s)	412, 527, 1151, 1430, 2005, 2072, 2438, 2447, 2890
NarI	GGCGCC	2 cut(s)	396, 654
NciI	CCSGG	4 cut(s)	459, 489, 1310, 2540
NcoI	CCATGG	2 cut(s)	147, 2780
NdeII	GATC	6 cut(s)	232, 366, 946, 1579, 2617, 2685
NmeAIII	GCCGAG	1 cut(s)	533
NmuCI	GTSAC	6 cut(s)	3, 66, 354, 1282, 1511, 2621
NsiI	ATGCAT	2 cut(s)	576, 2023
NspI	RCATGY	2 cut(s)	2867, 2884
NspV	TTCGAA	2 cut(s)	320, 2789
PaeI	GCATGC	1 cut(s)	2884
PagI	TCATGA	1 cut(s)	2140
PciI	ACATGT	1 cut(s)	2863
PcsI	WCGNNNNNNNCGW	2 cut(s)	1018, 2916
PdmI	GAANNNNTTC	2 cut(s)	1005, 1728
Pfl23II	CGTACG	1 cut(s)	600
PflMI	CCANNNNNTGG	2 cut(s)	1394, 2408
PfoI	TCCNGGA	1 cut(s)	769
PleI	GAGTC	5 cut(s)	955, 1445, 2158, 2200, 2572
PluTI	GGCGCC	2 cut(s)	399, 657
PpsI	GAGTC	5 cut(s)	955, 1445, 2158, 2200, 2572
PpuMI	RGGWCCY	1 cut(s)	1054
PscI	ACATGT	1 cut(s)	2863
Psp124BI	GAGCTC	2 cut(s)	515, 523
Psp5II	RGGWCCY	1 cut(s)	1054
Psp6I	CCWGG	8 cut(s)	502, 532, 661, 760, 769, 1393, 2355, 2808
PspEI	GGTNACC	1 cut(s)	203
PspGI	CCWGG	8 cut(s)	502, 532, 661, 760, 769, 1393, 2355, 2808
PspLI	CGTACG	1 cut(s)	600
PspPI	GGNCC	6 cut(s)	556, 702, 917, 1054, 2352, 2548
PspPPI	RGGWCCY	1 cut(s)	1054
PstI	CTGCAG	3 cut(s)	2007, 2437, 2889
PstNI	CAGNNNCTG	3 cut(s)	1394, 2213, 2441
PsuI	RGATCY	1 cut(s)	946
PvuII	CAGCTG	4 cut(s)	830, 1154, 2002, 2890
RsaI	GTAC	9 cut(s)	38, 240, 602, 1197, 1215, 1405, 1671, 2290, 2854
RsaNI	GTAC	9 cut(s)	37, 239, 601, 1196, 1214, 1404, 1670, 2289, 2853
RseI	CAYNNNNRTG	2 cut(s)	1719, 2154
SacI	GAGCTC	2 cut(s)	515, 523
SaqAI	TTAA	5 cut(s)	1064, 1071, 1107, 2964, 3004
Sau3AI	GATC	6 cut(s)	232, 366, 946, 1579, 2617, 2685
Sau96I	GGNCC	6 cut(s)	556, 702, 917, 1054, 2352, 2548
ScaI	AGTACT	1 cut(s)	2854
SchI	GAGTC	5 cut(s)	955, 1445, 2158, 2201, 2573
SfcI	CTRYAG	4 cut(s)	2003, 2387, 2433, 2885
SfoI	GGCGCC	2 cut(s)	397, 655
SfuI	TTCGAA	2 cut(s)	320, 2789
SinI	GGWCC	4 cut(s)	702, 917, 1054, 2548
SmiMI	CAYNNNNRTG	2 cut(s)	1719, 2154
SmlI	CTYRAG	3 cut(s)	648, 942, 2933
SmoI	CTYRAG	3 cut(s)	648, 942, 2933
SpeI	ACTAGT	1 cut(s)	1508
SphI	GCATGC	1 cut(s)	2884
SspDI	GGCGCC	2 cut(s)	395, 653
SstI	GAGCTC	2 cut(s)	515, 523
StyI	CCWWGG	5 cut(s)	95, 147, 965, 2642, 2780
TaaI	ACNGT	9 cut(s)	186, 307, 354, 438, 600, 850, 877, 2183, 2609
TaiI	ACGT	4 cut(s)	940, 1185, 2290, 2518
TaqI	TCGA	6 cut(s)	320, 365, 1244, 2688, 2789, 2973
TatI	WGTACW	2 cut(s)	1213, 2852
TauI	GCSGC	3 cut(s)	346, 502, 2441
Tru1I	TTAA	5 cut(s)	1064, 1071, 1107, 2964, 3004
Tru9I	TTAA	5 cut(s)	1064, 1071, 1107, 2964, 3004
TscAI	CASTG	7 cut(s)	189, 643, 729, 853, 882, 2188, 2245
TseFI	GTSAC	6 cut(s)	3, 66, 354, 1282, 1511, 2621
Tsp45I	GTSAC	6 cut(s)	3, 66, 354, 1282, 1511, 2621
TspGWI	ACGGA	5 cut(s)	1687, 1831, 2393, 2630, 2816
TspRI	CASTG	7 cut(s)	189, 643, 729, 853, 882, 2188, 2245
Van91I	CCANNNNNTGG	2 cut(s)	1394, 2408
VneI	GTGCAC	1 cut(s)	1173
VpaK11BI	GGWCC	4 cut(s)	702, 917, 1054, 2548
XagI	CCTNNNNNAGG	1 cut(s)	2813
XceI	RCATGY	2 cut(s)	2867, 2884
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2405
XmaJI	CCTAGG	2 cut(s)	95, 965
XmiI	GTMKAC	1 cut(s)	2512
XmnI	GAANNNNTTC	2 cut(s)	1005, 1728
ZrmI	AGTACT	1 cut(s)	2854
Zsp2I	ATGCAT	2 cut(s)	576, 2023

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.