Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0005357

Physical Location & Seq

Genomic Coordinates Forward (+)

26563941 .. 26569387

Gene Structure 5447 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G254700.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2853 bp

ATGGCGGACGCTCCTTCCTCTCCAGCAACAATCCTAGAATCCAATCCCCAATCCGATACCCCCAAACCCCAATCTAACCAACCGGATCCCGTTCCCGCTTCCACACCACCGCCATTATCATCATCAATCCCCATCCCCGTAAACCCTAATTCTAATCCGCCTCTGGTGTCTCTGCCACTGCCGCCGCCGCCTCCTTCGATCTCCTACGCTCCACAACAGGGCTCCGGTGCCGGACCTCCGTCGGCGCCGTCGTTTCGGCCGGTTCCTCAGTTCTCTCCAATACCGAGCCCCGGCGTGCCGAATCCGAATTATCACAACCCCGGTGTCCAGCCGCCCGGCGTGAGCTCTGGGTCTCCGATGGCTCCCGGTGTGCCCCCGCCGTCGTCGGTGCCGCCGCATATGATGCATTACCAGATGCAGCCCATGAGAGCGTACGCGCCGATGCCTAATGGATATGCGGCCATGCCCACTGGTGCTCCTCAAGGCTCCATGCCTCTCCCTGGACTTGCTCGTTATCCTTCTCCATATCATGCAATGCTTCGGCCTGCATTTACTCCGCGTCCACCAGGATCAATTGGTTCGCTTCCAGGTTTACCACGTGGCCCTGTTCCTGGGATTCCTGGAGTTCGCCCAATTATGCCCCCTGTTGTTAGGCCAACTCTTCCTAGTGTTACTCCAGCTGAGAAACCACAAACCACTGTTTATGTTGGGAAGATACCACCAACCGTGGATAATGATTTTATGTTATATCTCCTCCAGTTATGTGGACCTGTCAAGAGTTGGAAATGTACTCAAGTTCCTACAGATGCGACTCCTAGAGGGTTTGGGTTTTGCGAATTTGAATCTGCTGAAGGAGTTCTTCGTGCATTACGCCTTCTGAGTAAATTTAACATTGACGGGCAGGACCTTGTGTTAAATGTTAACCAAGCAACGAGAGAATATCTGGAGCGGTTTGTTGAGAAGAAAACGGAAAACTCAAAGAAGCTCAAAGAAGCTGAAGCAGCTGAGAAAGAGGATGAAAGTGCACTAGGTGTTGAGAAGAATGTACCTTCAAATCCTGCTGTATTGGACTCAAAGGAGGAGGATAGTAATTCGAGTAACAAAGAAAATGACGCTGCCAATTTTGGAATTGTGACTGACGAAGACAGAGAAGCTGACCGCGAAGCTATGGAGAAGCTTACAAGCTTGATAGAGGAGAGGTTAAAAACCAAACCTCTCCCTCCACCACCCACACCAGCTCCTGGCAATGGCACTGGGAATTCAAACTCAGAGCTGCCAGCTAAATCAAGGGATGGAGACTCTGATGTTGATATAACGCGAAATGATGCTTCAGAAGAAAAAAATGATGAAGAGACAACTAGTGACAACAAAGCAATAAGTGAGCAGGATAGGCCTGAAACAAGCTCACCTGACAGGAATAGAAAGCAAGATAGGAGGAGTAGAGACAAAGAGCGAGATCTGAAACGAGAAAAGGAGCGTGAGATTGAAAGATATGAAAGAGAAACAGAACGAGAACGGGTACGGAAGGAGAGGGAGCAAAGGAGAAAAATTGAGGATGCTGAGCATCAGTATGACAAATGTCTCAAAGATTGGGAGCATAGGGAAAGGGAGAAAGAGAAACAAAGGCAGTATGAGAAGGAGAGGGAGAAAGAAAGGGAACGCAAGAGGAAGAAAGAGGTAATCTATGAAGAAGATGATGAGGATGAAGATTCCAGAAAAAAGTGGAGGAGGAGTGCGCTGGAGGAGAAGAGAAAGAGGAGACTACGGGAGAAAGAAGATGACTTGGCTGACAGGCAGAAAGAAGAGGAAGAAATTGCTGAGGCCGAGAGGAGGGCCGATGAGGAAAAGCAGCTACAGCAAGAAAGAGAAGCATTGAGGGATTTATCTGTCCATGCAGCTAATGGAAGCGAACAAGTGGCTTTGGCTGAAGAATCCTTTGTGGAACTGAGAGATAAGGCTACTGAACAGAATAACGAGGGTGATTCTGGTCATGAGAATCATATGGGTTATGGAACTTTACAGAATGGTAACAGTGGTGATGAGTCAACAATGACATCAGTTCATGCATCAGAACCACAGCAGAGTGGCAGTGCCCCAGCAAAAAAGTTGGGTTTTGGCCTAGTAGGGTCTGGAAAACGTACTGCTGTTCCTTCTGTTTTCAATGAGGAGGATGATGATGCACACAAGGACAAAAAAATGAGGCCCCTGGTTCCCATTGATTATTCAACTGAAGAACTGCAGGCTGTCCAACAAACTGCTTCTGGGCCTCCATCAAATTTGGCTGCAGCTGCAGAATTCGCAAAGCGAATTTCAAATGTTAGTTCTAGGGAAGAGAAACCAGATACAGATAAGGAAAGAAATAGACGTGCTAATGATAGGTCGAGCCAACGGGATAGGGACAGGAATGATGATGACACTAATCGCACTAGAGATGAGAACAAGGAGAAGACTGACCGTGATACCAATCGAGAACATGGGCTGGATAAACCAAGGACAACGGATAACAAAAAACTTTTGGATGCGAAACAACTGATTGATATGATTCCAAAGACGAAAGAGGAATTATTCTCATATGAAATAAATTGGGCTATTTATGACAAGCATGCACTACATGAGAGAATGAGACCATGGATTTCAAAGAAGATTACAGAGTTTCTAGGAGAGGAAGAGACCACACTGGTAGATTACATTGTATCTAGTACTCAGGAACATGTGGGAGCAGAACGCATGCTACAGCTGCTTCAATCCATTTTAGACGAGGAAGCTGAAATGTTTGTTCTCAAGATGTGGAGGATGCTCATCTTTGAAATTAAGAAGGTTGAGACAGGTCTTGCTTCAAGAACAAGAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000381 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0008150 GO:0010468 GO:0010941 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0042981 GO:0043067 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:1901363 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PWI RRM_1

Protein Analysis

951

Amino Acids

106.85

Weight (kDa)

5.33

Isoelectric Point (pI)

61.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60200 AT1G60200 AT1G60200 AT1G60200
fragaria_vesca	FvH4_4g34570 FvH4_4g34571 FvH4_4g34571 FvH4_4g34571 FvH4_4g34571
malus_domestica	MD13G1091200.v1.1 MD16G1091700.v1.1
prunus_persica	Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1
pyrus_communis	pycom13g07940 pycom16g07830
rosa_chinensis	RchiOBHm_Chr4g0443951
rosa_laevigata	RLG00000005874
rosa_multiflora	Rmu_sc0011390.1_g000002
rosa_roxburghii	Rroxscaffold_5G00384490
rosa_rugosa	Rorug04G0348500 Rorug04G0348500
rosa_samantha	Rh4AG409100 Rh4BG420200 Rh4CG434200 Rh4DG415200
rosa_wichuraiana	Rw4G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	227, 244, 388
AccB7I	CCANNNNNTGG	1 cut(s)	1241
AccBSI	CCGCTC	1 cut(s)	949
AccII	CGCG	4 cut(s)	437, 559, 1161, 1318
AclWI	GGATC	3 cut(s)	80, 93, 577
AcoI	YGGCCR	2 cut(s)	257, 459
AcsI	RAATTY	6 cut(s)	836, 884, 1258, 2275, 2294, 2307
AcuI	CTGAAG	5 cut(s)	870, 1017, 1314, 1947, 2250
AcvI	CACGTG	1 cut(s)	599
AcyI	GRCGYC	1 cut(s)	245
AdeI	CACNNNGTG	1 cut(s)	1031
AfaI	GTAC	6 cut(s)	434, 790, 1047, 1521, 2140, 2701
AfiI	CCNNNNNNNGG	7 cut(s)	218, 290, 500, 611, 1241, 1247, 1830
AflIII	ACRYGT	1 cut(s)	2710
AhlI	ACTAGT	1 cut(s)	1358
AjiI	CACGTC	1 cut(s)	2366
AjnI	CCWGG	7 cut(s)	499, 565, 586, 610, 619, 1240, 2205
Alw21I	GWGCWC	3 cut(s)	347, 478, 1027
Alw44I	GTGCAC	1 cut(s)	1023
AlwI	GGATC	3 cut(s)	80, 93, 577
AlwNI	CAGNNNCTG	1 cut(s)	1241
ApaLI	GTGCAC	1 cut(s)	1023
ApoI	RAATTY	6 cut(s)	836, 884, 1258, 2275, 2294, 2307
Asp700I	GAANNNNTTC	1 cut(s)	855
AspLEI	GCGC	3 cut(s)	247, 439, 1738
AspS9I	GGNCC	7 cut(s)	233, 602, 767, 904, 1833, 2202, 2264
AsuC2I	CCSGG	4 cut(s)	291, 321, 336, 366
AsuHPI	GGTGA	3 cut(s)	1398, 1991, 2048
AvaII	GGWCC	3 cut(s)	233, 767, 904
BaeGI	GKGCMC	3 cut(s)	375, 1027, 2095
BamHI	GGATCC	1 cut(s)	85
BanI	GGYRCC	3 cut(s)	227, 244, 388
BanII	GRGCYC	3 cut(s)	224, 290, 347
BbrPI	CACGTG	1 cut(s)	599
BbsI	GAAGAC	2 cut(s)	1149, 2453
Bbv12I	GWGCWC	3 cut(s)	347, 478, 1027
BbvCI	CCTCAGC	1 cut(s)	1818
BccI	CCATC	4 cut(s)	140, 352, 1286, 2278
BceAI	ACGGC	2 cut(s)	232, 364
BciT130I	CCWGG	7 cut(s)	501, 567, 588, 612, 621, 1242, 2207
BcnI	CCSGG	4 cut(s)	291, 321, 336, 366
BcuI	ACTAGT	1 cut(s)	1358
BfmI	CTRYAG	6 cut(s)	801, 1853, 2237, 2283, 2289, 2732
BfoI	RGCGCY	1 cut(s)	248
BglII	AGATCT	1 cut(s)	1456
BlpI	GCTNAGC	1 cut(s)	1560
BmcAI	AGTACT	1 cut(s)	2701
Bme18I	GGWCC	3 cut(s)	233, 767, 904
BmgBI	CACGTC	1 cut(s)	2366
BmgT120I	GGNCC	7 cut(s)	233, 602, 767, 904, 1833, 2202, 2264
BmrI	ACTGGG	1 cut(s)	1263
BmuI	ACTGGG	1 cut(s)	1263
BoxI	GACNNNNGTC	2 cut(s)	238, 1578
BpiI	GAAGAC	2 cut(s)	1149, 2453
BpmI	CTGGAG	6 cut(s)	6, 642, 660, 740, 965, 1760
Bpu10I	CCTNAGC	1 cut(s)	1818
Bpu1102I	GCTNAGC	1 cut(s)	1560
BpuEI	CTTGAG	3 cut(s)	465, 777, 2765
BpuMI	CCSGG	4 cut(s)	291, 321, 336, 366
BsaAI	YACGTR	1 cut(s)	599
BsaBI	GATNNNNATC	2 cut(s)	2463, 2798
BsaHI	GRCGYC	1 cut(s)	245
BsaI	GGTCTC	3 cut(s)	357, 2617, 2663
BsaJI	CCNNGG	8 cut(s)	289, 319, 499, 611, 726, 2205, 2489, 2627
BsaWI	WCCGGW	2 cut(s)	82, 224
BsaXI	ACNNNNNCTCC	6 cut(s)	460, 490, 1222, 1252, 1717, 1747
Bsc4I	CCNNNNNNNGG	7 cut(s)	218, 290, 500, 611, 1241, 1247, 1830
Bse118I	RCCGGY	1 cut(s)	259
Bse1I	ACTGG	4 cut(s)	475, 757, 1258, 2682
Bse3DI	GCAATG	2 cut(s)	540, 1252
Bse8I	GATNNNNATC	2 cut(s)	2463, 2798
BseBI	CCWGG	7 cut(s)	501, 567, 588, 612, 621, 1242, 2207
BseDI	CCNNGG	8 cut(s)	289, 319, 499, 611, 726, 2205, 2489, 2627
BseGI	GGATG	8 cut(s)	132, 1021, 1297, 1561, 1708, 2176, 2524, 2799
BseJI	GATNNNNATC	2 cut(s)	2463, 2798
BseLI	CCNNNNNNNGG	7 cut(s)	218, 290, 500, 611, 1241, 1247, 1830
BseMI	GCAATG	2 cut(s)	540, 1252
BseMII	CTCAG	9 cut(s)	281, 672, 869, 996, 1281, 1551, 1809, 1937, 2717
BseNI	ACTGG	4 cut(s)	475, 757, 1258, 2682
BseSI	GKGCMC	3 cut(s)	375, 1027, 2095
BseX3I	CGGCCG	1 cut(s)	257
BseYI	CCCAGC	1 cut(s)	2095
Bsh1236I	CGCG	4 cut(s)	437, 559, 1161, 1318
Bsh1285I	CGRYCG	1 cut(s)	260
BshNI	GGYRCC	3 cut(s)	227, 244, 388
BsiEI	CGRYCG	1 cut(s)	260
BsiHKAI	GWGCWC	3 cut(s)	347, 478, 1027
BsiSI	CCGG	8 cut(s)	83, 225, 231, 260, 291, 321, 336, 366
BsiWI	CGTACG	1 cut(s)	432
BslFI	GGGAC	1 cut(s)	2411
BslI	CCNNNNNNNGG	7 cut(s)	218, 290, 500, 611, 1241, 1247, 1830
BsmFI	GGGAC	1 cut(s)	2411
Bso31I	GGTCTC	3 cut(s)	357, 2617, 2663
Bsp1286I	GDGCHC	7 cut(s)	224, 290, 347, 375, 478, 1027, 2095
Bsp143I	GATC	4 cut(s)	85, 198, 569, 1456
Bsp1720I	GCTNAGC	1 cut(s)	1560
Bsp19I	CCATGG	1 cut(s)	2627
BspCNI	CTCAG	9 cut(s)	280, 673, 870, 997, 1280, 1552, 1810, 1938, 2716
BspFNI	CGCG	4 cut(s)	437, 559, 1161, 1318
BspHI	TCATGA	1 cut(s)	1990
BspMAI	CTGCAG	3 cut(s)	2241, 2287, 2293
BspPI	GGATC	3 cut(s)	80, 93, 577
BspT107I	GGYRCC	3 cut(s)	227, 244, 388
BspTNI	GGTCTC	3 cut(s)	357, 2617, 2663
BsrBI	CCGCTC	1 cut(s)	949
BsrDI	GCAATG	2 cut(s)	540, 1252
BsrFI	RCCGGY	1 cut(s)	259
BsrI	ACTGG	4 cut(s)	475, 757, 1258, 2682
BssAI	RCCGGY	1 cut(s)	259
BssECI	CCNNGG	8 cut(s)	289, 319, 499, 611, 726, 2205, 2489, 2627
BssMI	GATC	4 cut(s)	85, 198, 569, 1456
BssNI	GRCGYC	1 cut(s)	245
BssT1I	CCWWGG	2 cut(s)	2489, 2627
Bst2UI	CCWGG	7 cut(s)	501, 567, 588, 612, 621, 1242, 2207
Bst4CI	ACNGT	4 cut(s)	700, 727, 2033, 2456
Bst6I	CTCTTC	6 cut(s)	666, 1344, 1742, 1797, 2325, 2661
BstACI	GRCGYC	1 cut(s)	245
BstAPI	GCANNNNNTGC	1 cut(s)	403
BstBAI	YACGTR	1 cut(s)	599
BstC8I	GCNNGC	6 cut(s)	296, 546, 1278, 2241, 2604, 2729
BstDEI	CTNAG	9 cut(s)	267, 681, 878, 1005, 1267, 1560, 1818, 1946, 2703
BstDSI	CCRYGG	2 cut(s)	726, 2627
BstF5I	GGATG	8 cut(s)	132, 1021, 1297, 1561, 1708, 2176, 2524, 2799
BstFNI	CGCG	4 cut(s)	437, 559, 1161, 1318
BstH2I	RGCGCY	1 cut(s)	248
BstHHI	GCGC	3 cut(s)	247, 439, 1738
BstKTI	GATC	4 cut(s)	88, 201, 572, 1459
BstMBI	GATC	4 cut(s)	85, 198, 569, 1456
BstMCI	CGRYCG	1 cut(s)	260
BstMWI	GCNNNNNNNGC	9 cut(s)	181, 187, 403, 1001, 1390, 1855, 2288, 2297, 2737
BstNI	CCWGG	7 cut(s)	501, 567, 588, 612, 621, 1242, 2207
BstNSI	RCATGY	3 cut(s)	2606, 2714, 2731
BstPAI	GACNNNNGTC	2 cut(s)	238, 1578
BstSFI	CTRYAG	6 cut(s)	801, 1853, 2237, 2283, 2289, 2732
BstSLI	GKGCMC	3 cut(s)	375, 1027, 2095
BstUI	CGCG	4 cut(s)	437, 559, 1161, 1318
BstV2I	GAAGAC	2 cut(s)	1149, 2453
BstX2I	RGATCY	2 cut(s)	85, 1456
BstXI	CCANNNNNNTGG	1 cut(s)	764
BstYI	RGATCY	2 cut(s)	85, 1456
BstZI	CGGCCG	1 cut(s)	257
BtgI	CCRYGG	2 cut(s)	726, 2627
BtrI	CACGTC	1 cut(s)	2366
BtsCI	GGATG	8 cut(s)	132, 1021, 1297, 1561, 1708, 2176, 2524, 2799
BtsI	GCAGTG	2 cut(s)	176, 2095
BtsIMutI	CAGTG	7 cut(s)	176, 468, 696, 1251, 2038, 2095, 2675
Cac8I	GCNNGC	6 cut(s)	296, 546, 1278, 2241, 2604, 2729
CaiI	CAGNNNCTG	1 cut(s)	1241
CciI	TCATGA	1 cut(s)	1990
CfoI	GCGC	3 cut(s)	247, 439, 1738
Cfr10I	RCCGGY	1 cut(s)	259
Cfr13I	GGNCC	7 cut(s)	233, 602, 767, 904, 1833, 2202, 2264
CseI	GACGC	3 cut(s)	17, 548, 1121
Csp6I	GTAC	6 cut(s)	433, 789, 1046, 1520, 2139, 2700
CviQI	GTAC	6 cut(s)	433, 789, 1046, 1520, 2139, 2700
DdeI	CTNAG	9 cut(s)	267, 681, 878, 1005, 1267, 1560, 1818, 1946, 2703
DinI	GGCGCC	1 cut(s)	246
DpnI	GATC	4 cut(s)	87, 200, 571, 1458
DpnII	GATC	4 cut(s)	85, 198, 569, 1456
DraIII	CACNNNGTG	1 cut(s)	1031
EaeI	YGGCCR	2 cut(s)	257, 459
EagI	CGGCCG	1 cut(s)	257
Eam1104I	CTCTTC	6 cut(s)	666, 1344, 1742, 1797, 2325, 2661
EarI	CTCTTC	6 cut(s)	666, 1344, 1742, 1797, 2325, 2661
EciI	GGCGGA	2 cut(s)	20, 147
Ecl136II	GAGCTC	1 cut(s)	345
EclXI	CGGCCG	1 cut(s)	257
Eco130I	CCWWGG	2 cut(s)	2489, 2627
Eco147I	AGGCCT	1 cut(s)	1393
Eco24I	GRGCYC	3 cut(s)	224, 290, 347
Eco31I	GGTCTC	3 cut(s)	357, 2617, 2663
Eco47I	GGWCC	3 cut(s)	233, 767, 904
Eco52I	CGGCCG	1 cut(s)	257
Eco53kI	GAGCTC	1 cut(s)	345
Eco57I	CTGAAG	5 cut(s)	870, 1017, 1314, 1947, 2250
Eco72I	CACGTG	1 cut(s)	599
EcoICRI	GAGCTC	1 cut(s)	345
EcoO109I	RGGNCCY	2 cut(s)	904, 2202
EcoRI	GAATTC	2 cut(s)	1258, 2294
EcoRII	CCWGG	7 cut(s)	499, 565, 586, 610, 619, 1240, 2205
EcoT14I	CCWWGG	2 cut(s)	2489, 2627
EcoT22I	ATGCAT	2 cut(s)	408, 2068
EcoT38I	GRGCYC	3 cut(s)	224, 290, 347
EgeI	GGCGCC	1 cut(s)	246
EheI	GGCGCC	1 cut(s)	246
ErhI	CCWWGG	2 cut(s)	2489, 2627
FalI	AAGNNNNNCTT	2 cut(s)	843, 875
FaqI	GGGAC	1 cut(s)	2411
FauI	CCCGC	2 cut(s)	103, 384
FauNDI	CATATG	3 cut(s)	399, 2001, 2572
FokI	GGATG	8 cut(s)	119, 1028, 1304, 1568, 1715, 2183, 2531, 2806
FriOI	GRGCYC	3 cut(s)	224, 290, 347
GlaI	GCGC	3 cut(s)	246, 438, 1737
GsaI	CCCAGC	1 cut(s)	2099
GsuI	CTGGAG	6 cut(s)	6, 642, 660, 740, 965, 1760
HaeII	RGCGCY	1 cut(s)	248
HapII	CCGG	8 cut(s)	83, 225, 231, 260, 291, 321, 336, 366
HgaI	GACGC	3 cut(s)	17, 548, 1121
HhaI	GCGC	3 cut(s)	247, 439, 1738
Hin1I	GRCGYC	1 cut(s)	245
Hin6I	GCGC	3 cut(s)	245, 437, 1736
HinP1I	GCGC	3 cut(s)	245, 437, 1736
HincII	GTYRAC	2 cut(s)	922, 2046
HindII	GTYRAC	2 cut(s)	922, 2046
HindIII	AAGCTT	2 cut(s)	1175, 1183
HpaI	GTTAAC	1 cut(s)	922
HpaII	CCGG	8 cut(s)	83, 225, 231, 260, 291, 321, 336, 366
HphI	GGTGA	3 cut(s)	1398, 1991, 2048
Hpy166II	GTNNAC	7 cut(s)	142, 563, 593, 767, 922, 1025, 2046
Hpy188I	TCNGA	9 cut(s)	55, 306, 357, 879, 1270, 1303, 1333, 1461, 2071
Hpy188III	TCNNGA	9 cut(s)	775, 944, 1713, 1991, 2130, 2468, 2705, 2782, 2838
Hpy8I	GTNNAC	7 cut(s)	142, 563, 593, 767, 922, 1025, 2046
Hpy99I	CGWCG	4 cut(s)	244, 253, 385, 388
HpyCH4III	ACNGT	4 cut(s)	700, 727, 2033, 2456
HpyCH4IV	ACGT	3 cut(s)	598, 2137, 2365
HpyF10VI	GCNNNNNNNGC	9 cut(s)	181, 187, 403, 1001, 1390, 1855, 2288, 2297, 2737
HpyF3I	CTNAG	9 cut(s)	267, 681, 878, 1005, 1267, 1560, 1818, 1946, 2703
HpySE526I	ACGT	3 cut(s)	598, 2137, 2365
Hsp92I	GRCGYC	1 cut(s)	245
HspAI	GCGC	3 cut(s)	245, 437, 1736
KasI	GGCGCC	1 cut(s)	244
KspAI	GTTAAC	1 cut(s)	922
Kzo9I	GATC	4 cut(s)	85, 198, 569, 1456
MaeII	ACGT	3 cut(s)	598, 2137, 2365
MaeIII	GTNAC	5 cut(s)	670, 1097, 1132, 1361, 2027
MalI	GATC	4 cut(s)	87, 200, 571, 1458
MbiI	CCGCTC	1 cut(s)	949
MboI	GATC	4 cut(s)	85, 198, 569, 1456
MfeI	CAATTG	1 cut(s)	573
MflI	RGATCY	2 cut(s)	85, 1456
MhlI	GDGCHC	7 cut(s)	224, 290, 347, 375, 478, 1027, 2095
Mly113I	GGCGCC	1 cut(s)	245
MlyI	GAGTC	4 cut(s)	805, 1064, 1292, 2051
MmeI	TCCRAC	2 cut(s)	761, 2272
Mph1103I	ATGCAT	2 cut(s)	408, 2068
MroXI	GAANNNNTTC	1 cut(s)	855
MseI	TTAA	5 cut(s)	888, 914, 921, 1202, 2811
MslI	CAYNNNNRTG	1 cut(s)	1569
MspA1I	CMGCKG	4 cut(s)	680, 1004, 2288, 2737
MspI	CCGG	8 cut(s)	83, 225, 231, 260, 291, 321, 336, 366
MunI	CAATTG	1 cut(s)	573
MvaI	CCWGG	7 cut(s)	501, 567, 588, 612, 621, 1242, 2207
MvnI	CGCG	4 cut(s)	437, 559, 1161, 1318
MwoI	GCNNNNNNNGC	9 cut(s)	181, 187, 403, 1001, 1390, 1855, 2288, 2297, 2737
NarI	GGCGCC	1 cut(s)	245
NciI	CCSGG	4 cut(s)	291, 321, 336, 366
NcoI	CCATGG	1 cut(s)	2627
NdeI	CATATG	3 cut(s)	399, 2001, 2572
NdeII	GATC	4 cut(s)	85, 198, 569, 1456
NmeAIII	GCCGAG	1 cut(s)	1849
NmuCI	GTSAC	2 cut(s)	1132, 1361
NsiI	ATGCAT	2 cut(s)	408, 2068
NspI	RCATGY	3 cut(s)	2606, 2714, 2731
PaeI	GCATGC	2 cut(s)	2606, 2731
PagI	TCATGA	1 cut(s)	1990
PceI	AGGCCT	1 cut(s)	1393
PciI	ACATGT	1 cut(s)	2710
PcsI	WCGNNNNNNNCGW	1 cut(s)	248
PdmI	GAANNNNTTC	1 cut(s)	855
PfeI	GAWTC	9 cut(s)	38, 301, 616, 842, 1709, 1931, 1982, 1996, 2542
Pfl23II	CGTACG	1 cut(s)	432
PflMI	CCANNNNNTGG	1 cut(s)	1241
PfoI	TCCNGGA	1 cut(s)	619
PleI	GAGTC	4 cut(s)	805, 1064, 1292, 2050
PluTI	GGCGCC	1 cut(s)	248
PmaCI	CACGTG	1 cut(s)	599
PmlI	CACGTG	1 cut(s)	599
PpsI	GAGTC	4 cut(s)	805, 1064, 1292, 2050
Ppu21I	YACGTR	1 cut(s)	599
PpuMI	RGGWCCY	1 cut(s)	904
PscI	ACATGT	1 cut(s)	2710
PshAI	GACNNNNGTC	2 cut(s)	238, 1578
Psp124BI	GAGCTC	1 cut(s)	347
Psp5II	RGGWCCY	1 cut(s)	904
Psp6I	CCWGG	7 cut(s)	499, 565, 586, 610, 619, 1240, 2205
PspCI	CACGTG	1 cut(s)	599
PspFI	CCCAGC	1 cut(s)	2095
PspGI	CCWGG	7 cut(s)	499, 565, 586, 610, 619, 1240, 2205
PspLI	CGTACG	1 cut(s)	432
PspPI	GGNCC	7 cut(s)	233, 602, 767, 904, 1833, 2202, 2264
PspPPI	RGGWCCY	1 cut(s)	904
PsrI	GAACNNNNNNTAC	2 cut(s)	2715, 2747
PstI	CTGCAG	3 cut(s)	2241, 2287, 2293
PstNI	CAGNNNCTG	1 cut(s)	1241
PsuI	RGATCY	2 cut(s)	85, 1456
PvuII	CAGCTG	4 cut(s)	680, 1004, 2288, 2737
RsaI	GTAC	6 cut(s)	434, 790, 1047, 1521, 2140, 2701
RsaNI	GTAC	6 cut(s)	433, 789, 1046, 1520, 2139, 2700
RseI	CAYNNNNRTG	1 cut(s)	1569
SacI	GAGCTC	1 cut(s)	347
SaqAI	TTAA	5 cut(s)	888, 914, 921, 1202, 2811
Sau3AI	GATC	4 cut(s)	85, 198, 569, 1456
Sau96I	GGNCC	7 cut(s)	233, 602, 767, 904, 1833, 2202, 2264
ScaI	AGTACT	1 cut(s)	2701
SchI	GAGTC	4 cut(s)	805, 1064, 1292, 2051
SduI	GDGCHC	7 cut(s)	224, 290, 347, 375, 478, 1027, 2095
SfcI	CTRYAG	6 cut(s)	801, 1853, 2237, 2283, 2289, 2732
SfoI	GGCGCC	1 cut(s)	246
SinI	GGWCC	3 cut(s)	233, 767, 904
SmiMI	CAYNNNNRTG	1 cut(s)	1569
SmlI	CTYRAG	3 cut(s)	480, 792, 2780
SmoI	CTYRAG	3 cut(s)	480, 792, 2780
SpeI	ACTAGT	1 cut(s)	1358
SphI	GCATGC	2 cut(s)	2606, 2731
SseBI	AGGCCT	1 cut(s)	1393
SspDI	GGCGCC	1 cut(s)	244
SstI	GAGCTC	1 cut(s)	347
StuI	AGGCCT	1 cut(s)	1393
StyI	CCWWGG	2 cut(s)	2489, 2627
TaaI	ACNGT	4 cut(s)	700, 727, 2033, 2456
TaiI	ACGT	3 cut(s)	601, 2140, 2368
TaqI	TCGA	4 cut(s)	197, 1094, 2381, 2467
TatI	WGTACW	2 cut(s)	788, 2699
TauI	GCSGC	7 cut(s)	184, 187, 190, 334, 394, 397, 461
TfiI	GAWTC	9 cut(s)	38, 301, 616, 842, 1709, 1931, 1982, 1996, 2542
Tru1I	TTAA	5 cut(s)	888, 914, 921, 1202, 2811
Tru9I	TTAA	5 cut(s)	888, 914, 921, 1202, 2811
TscAI	CASTG	7 cut(s)	183, 475, 703, 1258, 2038, 2095, 2682
TseFI	GTSAC	2 cut(s)	1132, 1361
Tsp45I	GTSAC	2 cut(s)	1132, 1361
TspDTI	ATGAA	7 cut(s)	1032, 1362, 1509, 1701, 1719, 2051, 2589
TspGWI	ACGGA	4 cut(s)	228, 983, 1537, 2513
TspRI	CASTG	7 cut(s)	183, 475, 703, 1258, 2038, 2095, 2682
Van91I	CCANNNNNTGG	1 cut(s)	1241
VneI	GTGCAC	1 cut(s)	1023
VpaK11BI	GGWCC	3 cut(s)	233, 767, 904
XapI	RAATTY	6 cut(s)	836, 884, 1258, 2275, 2294, 2307
XceI	RCATGY	3 cut(s)	2606, 2714, 2731
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1898
XmnI	GAANNNNTTC	1 cut(s)	855
ZrmI	AGTACT	1 cut(s)	2701
Zsp2I	ATGCAT	2 cut(s)	408, 2068

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.