Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005357

Physical Location & Seq

Genomic Coordinates Forward (+)

64880463 .. 64886028

Gene Structure 5566 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41165

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2829 bp

ATGGCCGACGATCCTCTTACTCCGGCGACGCAAGACCCGAGTCCCCAACCCGATAACCCGAATCCCCAATCCAAACAACCCGATCCCCCACCCGCTTCTGCACCACCACCACCGCAACCGCAACCATCATCCACCCCAATCCAATTAAACCCCAATCCCAATCCAAACAATCCGCCTCTAGTTTCTCTGCCGCCTCCGCCGCCGCAGCAGCCGTCGGTCTCTTACGCCCCGCAACCGGTCTCCACCGCCTTCGCCGTTCCTCCGGCCGCGCCATCTTTCCGGCCGGTTCCTCAGTTCTCTCCATTACCGAATTATCAAACTCCCGGCGTCCCTCCGCCGGGTGTCAGCTCCGGGGCTCCGATGGTTCCCGGTGCTCCGGTGCCGCAACATATGATGCATTATCAGATGCAACAGCCGATGAGACCCTACGCGCCAATGCCGAATGGCTACTCAGCTCCGCCGCAGGGCACCATTCCTCCGCCTGGACTTATTCGTTATCCCTCTCCATATCCTACAATGCTTCGACCTGGTTTTCCCTCACGGCCGCTGGGAGGAATTGCTTTGCTTCCATCTGTACAGCGCGCTCCTATGCTGGGTATTCCTGGGGTTCGCCCCGTTATGCCTCCTGTTGTTAGGCCAGCTGTTCCTAGTGTTACTCCAGCTGAGAAACCACAAACAACCGTCTATGTTGGCAAGATAGCCCCGACAGTAAACAATGATTTTATGTTATATCTCCTTCAGTTATGTGGACCTGTCAAGAGTTGGAAGCGTGCTCAAGATCCCACAGATGGGACTCCTAGAGGCTTTGGATTTTGTGATTTTGAATCTGCTGAAGGGGTTCTTCGTGCATTACGCCTTCTGAGTAAATTCAACATCGATGGGCAGGAGCTGGTGTTAAATGTAAATCAAGCAACAAGAGAGTATCTAGAGCGGTTTGTTGAAAAGAAAACTGAAAATTCAAAGAAGCTGAAAGACACTCAAGCTGAGGGAGATGAGAAAGAGGGTGAGAGTAACGTTGATAAGACTGCAGTTCCAAATTCTGTTGTGGATTCGAAGGCGGAGGATAGTAATACGGGGAACAAAGAAAGCAACACTACGAACTTTGGGATTGTGACCGATGAAGACAAGGAAGCTGACAGGGTGGCCATGGAGAAGCTTACAAGCTTGATAGAGGAGAGATTAAAAACAAATCCTCTGCCTCCACCGCCTCCACTTGCTCCTGGTGATCGTACTGGGAATTCAATCTCAGAGCTTCCAGCTAAGGCAAGGGATGGAGACCTTGATGTGGATATAACAAGAAATGATGCTTCTGAAGAAAAAAATGATGAAGAGACAACTAGTGACAACAAAGTTGAAAGTGAGCAGGATAGGCCTGAAACAAGCTCACCTGAGAGGAGTAGAAAGCCTGATAAAAGTAGAGAAAGAGACAGAGAGCGAGATGTGAAACAGGAAAAGGAGCGTGAGATTGAAAGATATGAAAGAGAAACAGAGCGAGAACGGATAAGGAAGGAGAGAGAGCAGAGGAGGAGAATTGAGGACGCAGAACGCAAGTTTGAAGAATGTCTCAAAGATTGGGAGTATAGGGAAAGGGAGAAACAGAAACAGCGGCAATATGAAAAGGAGAGGGAGAAAGAACGGGAACGGAAACGGAAGAAAGATATAATTAATGAAGAAGATGATGAGGAAGAAGATTCTAGAAAAAGGTGGCGCAGGAATGTGTGGGAGGAGAAGAGGAAGAGGAGACAGAGGGAGAAGGAAGATGACTTGGCTGACAGATTAAGAGAAGAGGAAGAAATTGCTGAGGCCAACAGGAGGGCTGATCAGGAAAAGCAGCTCCAGCAACTGAGAGATGCACTGAAGGCTTCATCTGACCATTTAGTGGATGGAAGAGAAATGGCAGATTTGGCTGAAGAATCCTTTGTGGAATCGAAAGATATGGCCATTAAACAGGACAATGAGACTGGTTCTGGTCCTGAGAACCATATAGGTGATGGGACTCTACAAAATGGTAACACTGGGGATGAATCAGCCAATACATCAGAACCCCAGCAGAGTGGGAGTGCCCCAGCCAAAAAGTTGGGTTTTGGTTTAGTTGGCTCTGGGAAACGTACTTCTGTTCCTTCTGTTTTCAACGAGGAGGATGATGATGCACACAAGGACAAAAAGATGAGGCCTCTGGTCCCTATTGACTATTCAACTGAAGAACTACAGGCTGTCGAACCGGTTGCTTCTGGGCAAGCGCCACCAAATTTGGCTGCAGCTGCAGAATTTGCAAAGCGAATATCAAATGTTGGTTCTAAAGAAGAGAAGCACGATGCAGAGAAGGAGAGAAATAGACGTGCCAATGATAGGTCGAGTCAACGGGACAGGGATAGGAATGATGATGACACTAACCGCACTAGAGATGAGAACAAGGAGAAGACTGTTGACCGTGATACAGACCGGGAACATGGGCGGGATAAACCGAGGACAACAGATAATAAGAAGCTTTTGGACGCAAAACAACTGATTGATATGATTCCAAGGACCAAAGAGGAGTTATTCTCATATGAAATAAATTGGGCTATTTATGAAAAGCATGCACTTCATGAGAGAATGAAACCATGGATTTCAAAGAAGATTACAGAGTTTCTTGGAGAGGAAGAAACCACACTGGTAGATTATATTGTATCTAGTACTCAAGAACATGTGGGAGCAGAACGCATGCTACAGCTGCTTCAATCCATTTTAGACGAGGAAGCTGAAATGTTTGTTCTCAAGATGTGGAGGATGCTCATCTTTGAAATTAAGAAGGTAGAGACAGGCTTACCTTCAAAAACAAGATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000381 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0008150 GO:0010468 GO:0010941 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0042981 GO:0043067 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:1901363 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PWI RRM_1

Protein Analysis

942

Amino Acids

106.68

Weight (kDa)

5.25

Isoelectric Point (pI)

62.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	228 - 297	2.5e-08	RNA recognition motif
PWI	PF01480	865 - 928	1.1e-13	PWI domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60200 AT1G60200 AT1G60200 AT1G60200
fragaria_vesca	FvH4_4g34570 FvH4_4g34571 FvH4_4g34571 FvH4_4g34571 FvH4_4g34571
malus_domestica	MD13G1091200.v1.1 MD16G1091700.v1.1
prunus_persica	Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1 Prupe.1G254700_v2.0.a1
pyrus_communis	pycom13g07940 pycom16g07830
rosa_chinensis	RchiOBHm_Chr4g0443951
rosa_laevigata	RLG00000005874
rosa_multiflora	Rmu_sc0011390.1_g000002
rosa_roxburghii	Rroxscaffold_5G00384490
rosa_rugosa	Rorug04G0348500 Rorug04G0348500
rosa_samantha	Rh4AG409100 Rh4BG420200 Rh4CG434200 Rh4DG415200
rosa_wichuraiana	Rw4G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	379, 467
AccB7I	CCANNNNNTGG	1 cut(s)	1879
AccBSI	CCGCTC	1 cut(s)	931
AccII	CGCG	3 cut(s)	269, 431, 582
AclI	AACGTT	1 cut(s)	1014
AclWI	GGATC	3 cut(s)	5, 77, 773
AcoI	YGGCCR	6 cut(s)	3, 264, 281, 542, 1143, 1938
AcsI	RAATTY	6 cut(s)	866, 955, 1036, 1237, 2248, 2267
AcuI	CTGAAG	6 cut(s)	722, 852, 1332, 1877, 1929, 2220
AcyI	GRCGYC	1 cut(s)	327
AfaI	GTAC	4 cut(s)	576, 1231, 2110, 2677
AflIII	ACRYGT	1 cut(s)	2686
AgeI	ACCGGT	2 cut(s)	235, 2221
AhlI	ACTAGT	1 cut(s)	1337
AjiI	CACGTC	1 cut(s)	2339
AjnI	CCWGG	4 cut(s)	481, 526, 601, 1219
Alw21I	GWGCWC	2 cut(s)	376, 775
AlwI	GGATC	3 cut(s)	5, 77, 773
AlwNI	CAGNNNCTG	2 cut(s)	889, 1843
Ama87I	CYCGRG	1 cut(s)	37
ApeKI	GCWGC	7 cut(s)	205, 208, 1831, 2255, 2258, 2261, 2713
ApoI	RAATTY	6 cut(s)	866, 955, 1036, 1237, 2248, 2267
AseI	ATTAAT	1 cut(s)	1665
AsiGI	ACCGGT	2 cut(s)	235, 2221
Asp700I	GAANNNNTTC	1 cut(s)	837
AspLEI	GCGC	6 cut(s)	271, 433, 582, 584, 1710, 2242
AspS9I	GGNCC	4 cut(s)	749, 1970, 2179, 2526
AsuC2I	CCSGG	5 cut(s)	324, 339, 352, 369, 2444
AsuHPI	GGTGA	4 cut(s)	1016, 1235, 1377, 2000
AsuII	TTCGAA	1 cut(s)	1052
AvaI	CYCGRG	1 cut(s)	37
AvaII	GGWCC	4 cut(s)	749, 1970, 2179, 2526
BaeGI	GKGCMC	2 cut(s)	470, 2065
BalI	TGGCCA	2 cut(s)	1145, 1940
BanI	GGYRCC	2 cut(s)	379, 467
BanII	GRGCYC	1 cut(s)	358
BbsI	GAAGAC	2 cut(s)	1128, 2426
Bbv12I	GWGCWC	2 cut(s)	376, 775
BbvCI	CCTCAGC	2 cut(s)	984, 1800
BbvI	GCAGC	7 cut(s)	217, 220, 1843, 2242, 2248, 2270, 2700
BccI	CCATC	9 cut(s)	133, 280, 355, 577, 782, 872, 1265, 1877, 1985
BceAI	ACGGC	3 cut(s)	196, 239, 557
BcgI	CGANNNNNNTGC	2 cut(s)	2207, 2241
BciT130I	CCWGG	4 cut(s)	483, 528, 603, 1221
BclI	TGATCA	1 cut(s)	1819
BcnI	CCSGG	5 cut(s)	324, 339, 352, 369, 2444
BcuI	ACTAGT	1 cut(s)	1337
BfaI	CTAG	8 cut(s)	179, 648, 798, 926, 1338, 1695, 2400, 2673
BfmI	CTRYAG	5 cut(s)	1026, 2207, 2256, 2262, 2708
BfoI	RGCGCY	1 cut(s)	2243
BmcAI	AGTACT	1 cut(s)	2677
Bme1390I	CCNGG	9 cut(s)	324, 339, 352, 369, 483, 528, 603, 1221, 2444
Bme18I	GGWCC	4 cut(s)	749, 1970, 2179, 2526
BmeT110I	CYCGRG	1 cut(s)	37
BmgBI	CACGTC	1 cut(s)	2339
BmgT120I	GGNCC	4 cut(s)	749, 1970, 2179, 2526
BmiI	GGNNCC	6 cut(s)	288, 357, 366, 381, 469, 2181
BmrFI	CCNGG	9 cut(s)	324, 339, 352, 369, 483, 528, 603, 1221, 2444
BmrI	ACTGGG	2 cut(s)	1242, 2025
BmsI	GCATC	7 cut(s)	384, 396, 1294, 1840, 2137, 2305, 2760
BmuI	ACTGGG	2 cut(s)	1242, 2025
BoxI	GACNNNNGTC	1 cut(s)	39
BpiI	GAAGAC	2 cut(s)	1128, 2426
BplI	GAGNNNNNCTC	2 cut(s)	2528, 2560
BpmI	CTGGAG	2 cut(s)	642, 1820
Bpu10I	CCTNAGC	3 cut(s)	984, 1260, 1800
Bpu14I	TTCGAA	1 cut(s)	1052
BpuEI	CTTGAG	4 cut(s)	759, 963, 2664, 2741
BpuMI	CCSGG	5 cut(s)	324, 339, 352, 369, 2444
Bsa29I	ATCGAT	1 cut(s)	876
BsaBI	GATNNNNATC	1 cut(s)	2774
BsaHI	GRCGYC	1 cut(s)	327
BsaI	GGTCTC	4 cut(s)	223, 244, 415, 1269
BsaJI	CCNNGG	6 cut(s)	351, 602, 1146, 2465, 2522, 2603
BsaWI	WCCGGW	3 cut(s)	235, 376, 2221
BsaXI	ACNNNNNCTCC	4 cut(s)	460, 490, 878, 908
Bse118I	RCCGGY	3 cut(s)	235, 283, 2221
Bse1I	ACTGG	4 cut(s)	1237, 1966, 2020, 2658
Bse8I	GATNNNNATC	1 cut(s)	2774
BseBI	CCWGG	4 cut(s)	483, 528, 603, 1221
BseCI	ATCGAT	1 cut(s)	876
BseDI	CCNNGG	6 cut(s)	351, 602, 1146, 2465, 2522, 2603
BseGI	GGATG	6 cut(s)	128, 1276, 1888, 2026, 2146, 2775
BseJI	GATNNNNATC	1 cut(s)	2774
BseNI	ACTGG	4 cut(s)	1237, 1966, 2020, 2658
BsePI	GCGCGC	1 cut(s)	580
BseRI	GAGGAG	8 cut(s)	1187, 1408, 1537, 1540, 1739, 1753, 2150, 2549
BseSI	GKGCMC	2 cut(s)	470, 2065
BseX3I	CGGCCG	3 cut(s)	264, 281, 542
BseXI	GCAGC	7 cut(s)	217, 220, 1843, 2242, 2248, 2270, 2700
BseYI	CCCAGC	4 cut(s)	547, 592, 2046, 2065
BsgI	GTGCAG	1 cut(s)	84
Bsh1236I	CGCG	3 cut(s)	269, 431, 582
Bsh1285I	CGRYCG	3 cut(s)	267, 284, 545
BshNI	GGYRCC	2 cut(s)	379, 467
BshTI	ACCGGT	2 cut(s)	235, 2221
BshVI	ATCGAT	1 cut(s)	876
BsiEI	CGRYCG	3 cut(s)	267, 284, 545
BsiHKAI	GWGCWC	2 cut(s)	376, 775
BsiHKCI	CYCGRG	1 cut(s)	37
BslFI	GGGAC	6 cut(s)	27, 314, 805, 2008, 2165, 2378
BsmFI	GGGAC	6 cut(s)	27, 314, 805, 2008, 2165, 2378
Bso31I	GGTCTC	4 cut(s)	223, 244, 415, 1269
BsoBI	CYCGRG	1 cut(s)	37
Bsp119I	TTCGAA	1 cut(s)	1052
Bsp1286I	GDGCHC	5 cut(s)	358, 376, 470, 775, 2065
Bsp1407I	TGTACA	1 cut(s)	574
Bsp143I	GATC	6 cut(s)	10, 82, 778, 1225, 1819, 2822
Bsp19I	CCATGG	2 cut(s)	1146, 2603
BspDI	ATCGAT	1 cut(s)	876
BspFNI	CGCG	3 cut(s)	269, 431, 582
BspHI	TCATGA	2 cut(s)	2587, 2825
BspLI	GGNNCC	6 cut(s)	288, 357, 366, 381, 469, 2181
BspMAI	CTGCAG	3 cut(s)	1030, 2260, 2266
BspPI	GGATC	3 cut(s)	5, 77, 773
BspT104I	TTCGAA	1 cut(s)	1052
BspT107I	GGYRCC	2 cut(s)	379, 467
BspTNI	GGTCTC	4 cut(s)	223, 244, 415, 1269
BsrBI	CCGCTC	1 cut(s)	931
BsrFI	RCCGGY	3 cut(s)	235, 283, 2221
BsrGI	TGTACA	1 cut(s)	574
BsrI	ACTGG	4 cut(s)	1237, 1966, 2020, 2658
BssAI	RCCGGY	3 cut(s)	235, 283, 2221
BssECI	CCNNGG	6 cut(s)	351, 602, 1146, 2465, 2522, 2603
BssHII	GCGCGC	1 cut(s)	580
BssMI	GATC	6 cut(s)	10, 82, 778, 1225, 1819, 2822
BssNI	GRCGYC	1 cut(s)	327
BssT1I	CCWWGG	3 cut(s)	1146, 2522, 2603
Bst2UI	CCWGG	4 cut(s)	483, 528, 603, 1221
Bst4CI	ACNGT	4 cut(s)	682, 709, 2425, 2432
Bst6I	CTCTTC	6 cut(s)	1323, 1724, 1730, 1779, 1882, 2298
BstACI	GRCGYC	1 cut(s)	327
BstAPI	GCANNNNNTGC	1 cut(s)	2270
BstAUI	TGTACA	1 cut(s)	574
BstBI	TTCGAA	1 cut(s)	1052
BstC8I	GCNNGC	6 cut(s)	582, 639, 771, 2238, 2580, 2705
BstDSI	CCRYGG	2 cut(s)	1146, 2603
BstF5I	GGATG	6 cut(s)	128, 1276, 1888, 2026, 2146, 2775
BstFNI	CGCG	3 cut(s)	269, 431, 582
BstH2I	RGCGCY	1 cut(s)	2243
BstHHI	GCGC	6 cut(s)	271, 433, 582, 584, 1710, 2242
BstKTI	GATC	6 cut(s)	13, 85, 781, 1228, 1822, 2825
BstMBI	GATC	6 cut(s)	10, 82, 778, 1225, 1819, 2822
BstMCI	CGRYCG	3 cut(s)	267, 284, 545
BstNI	CCWGG	4 cut(s)	483, 528, 603, 1221
BstNSI	RCATGY	3 cut(s)	2582, 2690, 2707
BstPAI	GACNNNNGTC	1 cut(s)	39
BstSCI	CCNGG	9 cut(s)	322, 337, 350, 367, 481, 526, 601, 1219, 2442
BstSFI	CTRYAG	5 cut(s)	1026, 2207, 2256, 2262, 2708
BstSLI	GKGCMC	2 cut(s)	470, 2065
BstUI	CGCG	3 cut(s)	269, 431, 582
BstV1I	GCAGC	7 cut(s)	217, 220, 1843, 2242, 2248, 2270, 2700
BstV2I	GAAGAC	2 cut(s)	1128, 2426
BstX2I	RGATCY	1 cut(s)	778
BstXI	CCANNNNNNTGG	2 cut(s)	2054, 2077
BstYI	RGATCY	1 cut(s)	778
BstZI	CGGCCG	3 cut(s)	264, 281, 542
Bsu15I	ATCGAT	1 cut(s)	876
BsuTUI	ATCGAT	1 cut(s)	876
BtgI	CCRYGG	2 cut(s)	1146, 2603
BtrI	CACGTC	1 cut(s)	2339
BtsCI	GGATG	6 cut(s)	128, 1276, 1888, 2026, 2146, 2775
BtsIMutI	CAGTG	3 cut(s)	1853, 2013, 2651
Cac8I	GCNNGC	6 cut(s)	582, 639, 771, 2238, 2580, 2705
CaiI	CAGNNNCTG	2 cut(s)	889, 1843
CciI	TCATGA	2 cut(s)	2587, 2825
CfoI	GCGC	6 cut(s)	271, 433, 582, 584, 1710, 2242
Cfr10I	RCCGGY	3 cut(s)	235, 283, 2221
Cfr13I	GGNCC	4 cut(s)	749, 1970, 2179, 2526
ClaI	ATCGAT	1 cut(s)	876
CseI	GACGC	4 cut(s)	37, 316, 1547, 2504
CsiI	ACCWGGT	1 cut(s)	526
Csp6I	GTAC	4 cut(s)	575, 1230, 2109, 2676
CspAI	ACCGGT	2 cut(s)	235, 2221
CspCI	CAANNNNNGTGG	2 cut(s)	2232, 2267
CviAII	CATG	8 cut(s)	1147, 2450, 2579, 2588, 2604, 2687, 2704, 2826
CviQI	GTAC	4 cut(s)	575, 1230, 2109, 2676
DpnI	GATC	6 cut(s)	12, 84, 780, 1227, 1821, 2824
DpnII	GATC	6 cut(s)	10, 82, 778, 1225, 1819, 2822
EaeI	YGGCCR	6 cut(s)	3, 264, 281, 542, 1143, 1938
EagI	CGGCCG	3 cut(s)	264, 281, 542
Eam1104I	CTCTTC	6 cut(s)	1323, 1724, 1730, 1779, 1882, 2298
EarI	CTCTTC	6 cut(s)	1323, 1724, 1730, 1779, 1882, 2298
EciI	GGCGGA	6 cut(s)	162, 186, 324, 447, 468, 1073
EclXI	CGGCCG	3 cut(s)	264, 281, 542
Eco130I	CCWWGG	3 cut(s)	1146, 2522, 2603
Eco147I	AGGCCT	2 cut(s)	1372, 2173
Eco24I	GRGCYC	1 cut(s)	358
Eco31I	GGTCTC	4 cut(s)	223, 244, 415, 1269
Eco47I	GGWCC	4 cut(s)	749, 1970, 2179, 2526
Eco52I	CGGCCG	3 cut(s)	264, 281, 542
Eco57I	CTGAAG	6 cut(s)	722, 852, 1332, 1877, 1929, 2220
Eco88I	CYCGRG	1 cut(s)	37
EcoRI	GAATTC	1 cut(s)	1237
EcoRII	CCWGG	4 cut(s)	481, 526, 601, 1219
EcoT14I	CCWWGG	3 cut(s)	1146, 2522, 2603
EcoT22I	ATGCAT	1 cut(s)	399
EcoT38I	GRGCYC	1 cut(s)	358
ErhI	CCWWGG	3 cut(s)	1146, 2522, 2603
FaeI	CATG	8 cut(s)	1150, 2453, 2582, 2591, 2607, 2690, 2707, 2829
FalI	AAGNNNNNCTT	2 cut(s)	825, 857
FaqI	GGGAC	6 cut(s)	27, 314, 805, 2008, 2165, 2378
FatI	CATG	8 cut(s)	1146, 2449, 2578, 2587, 2603, 2686, 2703, 2825
FauI	CCCGC	3 cut(s)	100, 237, 2448
FauNDI	CATATG	2 cut(s)	390, 2548
FbaI	TGATCA	1 cut(s)	1819
FokI	GGATG	6 cut(s)	115, 1283, 1895, 2033, 2153, 2782
FriOI	GRGCYC	1 cut(s)	358
FspBI	CTAG	8 cut(s)	179, 648, 798, 926, 1338, 1695, 2400, 2673
GlaI	GCGC	6 cut(s)	270, 432, 581, 583, 1709, 2241
GsaI	CCCAGC	4 cut(s)	551, 596, 2050, 2069
GsuI	CTGGAG	2 cut(s)	642, 1820
HaeII	RGCGCY	1 cut(s)	2243
HgaI	GACGC	4 cut(s)	37, 316, 1547, 2504
HhaI	GCGC	6 cut(s)	271, 433, 582, 584, 1710, 2242
Hin1I	GRCGYC	1 cut(s)	327
Hin1II	CATG	8 cut(s)	1150, 2453, 2582, 2591, 2607, 2690, 2707, 2829
Hin6I	GCGC	6 cut(s)	269, 431, 580, 582, 1708, 2240
HinP1I	GCGC	6 cut(s)	269, 431, 580, 582, 1708, 2240
HincII	GTYRAC	2 cut(s)	2360, 2428
HindII	GTYRAC	2 cut(s)	2360, 2428
HindIII	AAGCTT	3 cut(s)	1154, 1162, 2486
HphI	GGTGA	4 cut(s)	1016, 1235, 1377, 2000
Hpy166II	GTNNAC	4 cut(s)	712, 749, 2360, 2428
Hpy188I	TCNGA	7 cut(s)	360, 405, 861, 1249, 1312, 1870, 2041
Hpy8I	GTNNAC	4 cut(s)	712, 749, 2360, 2428
Hpy99I	CGWCG	3 cut(s)	11, 31, 217
HpyCH4III	ACNGT	4 cut(s)	682, 709, 2425, 2432
HpyCH4IV	ACGT	3 cut(s)	1014, 2107, 2338
HpySE526I	ACGT	3 cut(s)	1014, 2107, 2338
Hsp92I	GRCGYC	1 cut(s)	327
Hsp92II	CATG	8 cut(s)	1150, 2453, 2582, 2591, 2607, 2690, 2707, 2829
HspAI	GCGC	6 cut(s)	269, 431, 580, 582, 1708, 2240
Ksp22I	TGATCA	1 cut(s)	1819
Kzo9I	GATC	6 cut(s)	10, 82, 778, 1225, 1819, 2822
Lsp1109I	GCAGC	7 cut(s)	217, 220, 1843, 2242, 2248, 2270, 2700
LweI	GCATC	7 cut(s)	384, 396, 1294, 1840, 2137, 2305, 2760
MabI	ACCWGGT	1 cut(s)	526
MaeI	CTAG	8 cut(s)	179, 648, 798, 926, 1338, 1695, 2400, 2673
MaeII	ACGT	3 cut(s)	1014, 2107, 2338
MaeIII	GTNAC	5 cut(s)	652, 1010, 1111, 1340, 2009
MalI	GATC	6 cut(s)	12, 84, 780, 1227, 1821, 2824
MbiI	CCGCTC	1 cut(s)	931
MboI	GATC	6 cut(s)	10, 82, 778, 1225, 1819, 2822
MflI	RGATCY	1 cut(s)	778
MhlI	GDGCHC	5 cut(s)	358, 376, 470, 775, 2065
MlsI	TGGCCA	2 cut(s)	1145, 1940
MluNI	TGGCCA	2 cut(s)	1145, 1940
MlyI	GAGTC	4 cut(s)	49, 787, 1990, 2365
MmeI	TCCRAC	1 cut(s)	743
Mox20I	TGGCCA	2 cut(s)	1145, 1940
Mph1103I	ATGCAT	1 cut(s)	399
MroXI	GAANNNNTTC	1 cut(s)	837
MscI	TGGCCA	2 cut(s)	1145, 1940
MseI	TTAA	7 cut(s)	146, 896, 1181, 1665, 1778, 1944, 2787
MslI	CAYNNNNRTG	1 cut(s)	1986
Msp20I	TGGCCA	2 cut(s)	1145, 1940
MspA1I	CMGCKG	6 cut(s)	547, 641, 662, 1606, 2261, 2713
MspR9I	CCNGG	9 cut(s)	324, 339, 352, 369, 483, 528, 603, 1221, 2444
MvaI	CCWGG	4 cut(s)	483, 528, 603, 1221
MvnI	CGCG	3 cut(s)	269, 431, 582
NciI	CCSGG	5 cut(s)	324, 339, 352, 369, 2444
NcoI	CCATGG	2 cut(s)	1146, 2603
NdeI	CATATG	2 cut(s)	390, 2548
NdeII	GATC	6 cut(s)	10, 82, 778, 1225, 1819, 2822
NlaIII	CATG	8 cut(s)	1150, 2453, 2582, 2591, 2607, 2690, 2707, 2829
NlaIV	GGNNCC	6 cut(s)	288, 357, 366, 381, 469, 2181
NmuCI	GTSAC	2 cut(s)	1111, 1340
NsiI	ATGCAT	1 cut(s)	399
NspI	RCATGY	3 cut(s)	2582, 2690, 2707
NspV	TTCGAA	1 cut(s)	1052
PaeI	GCATGC	2 cut(s)	2582, 2707
PagI	TCATGA	2 cut(s)	2587, 2825
PauI	GCGCGC	1 cut(s)	580
PceI	AGGCCT	2 cut(s)	1372, 2173
PciI	ACATGT	1 cut(s)	2686
PcsI	WCGNNNNNNNCGW	1 cut(s)	35
PdmI	GAANNNNTTC	1 cut(s)	837
PfeI	GAWTC	8 cut(s)	61, 824, 1049, 1691, 1913, 1925, 2024, 2518
PflMI	CCANNNNNTGG	1 cut(s)	1879
PinAI	ACCGGT	2 cut(s)	235, 2221
PleI	GAGTC	4 cut(s)	48, 787, 1990, 2364
PpsI	GAGTC	4 cut(s)	48, 787, 1990, 2364
PscI	ACATGT	1 cut(s)	2686
PshAI	GACNNNNGTC	1 cut(s)	39
PshBI	ATTAAT	1 cut(s)	1665
Psp1406I	AACGTT	1 cut(s)	1014
Psp6I	CCWGG	4 cut(s)	481, 526, 601, 1219
PspFI	CCCAGC	4 cut(s)	547, 592, 2046, 2065
PspGI	CCWGG	4 cut(s)	481, 526, 601, 1219
PspN4I	GGNNCC	6 cut(s)	288, 357, 366, 381, 469, 2181
PspPI	GGNCC	4 cut(s)	749, 1970, 2179, 2526
PsrI	GAACNNNNNNTAC	2 cut(s)	2691, 2723
PstI	CTGCAG	3 cut(s)	1030, 2260, 2266
PstNI	CAGNNNCTG	2 cut(s)	889, 1843
PsuI	RGATCY	1 cut(s)	778
PteI	GCGCGC	1 cut(s)	580
PvuII	CAGCTG	4 cut(s)	641, 662, 2261, 2713
RsaI	GTAC	4 cut(s)	576, 1231, 2110, 2677
RsaNI	GTAC	4 cut(s)	575, 1230, 2109, 2676
RseI	CAYNNNNRTG	1 cut(s)	1986
SaqAI	TTAA	7 cut(s)	146, 896, 1181, 1665, 1778, 1944, 2787
Sau3AI	GATC	6 cut(s)	10, 82, 778, 1225, 1819, 2822
Sau96I	GGNCC	4 cut(s)	749, 1970, 2179, 2526
ScaI	AGTACT	1 cut(s)	2677
SchI	GAGTC	4 cut(s)	49, 787, 1990, 2365
ScrFI	CCNGG	9 cut(s)	324, 339, 352, 369, 483, 528, 603, 1221, 2444
SduI	GDGCHC	5 cut(s)	358, 376, 470, 775, 2065
SexAI	ACCWGGT	1 cut(s)	526
SfaNI	GCATC	7 cut(s)	384, 396, 1294, 1840, 2137, 2305, 2760
SfcI	CTRYAG	5 cut(s)	1026, 2207, 2256, 2262, 2708
SfuI	TTCGAA	1 cut(s)	1052
SinI	GGWCC	4 cut(s)	749, 1970, 2179, 2526
SmiMI	CAYNNNNRTG	1 cut(s)	1986
SmlI	CTYRAG	4 cut(s)	774, 978, 2679, 2756
SmoI	CTYRAG	4 cut(s)	774, 978, 2679, 2756
SpeI	ACTAGT	1 cut(s)	1337
SphI	GCATGC	2 cut(s)	2582, 2707
SseBI	AGGCCT	2 cut(s)	1372, 2173
SspMI	CTAG	8 cut(s)	179, 648, 798, 926, 1338, 1695, 2400, 2673
StuI	AGGCCT	2 cut(s)	1372, 2173
StyD4I	CCNGG	9 cut(s)	322, 337, 350, 367, 481, 526, 601, 1219, 2442
StyI	CCWWGG	3 cut(s)	1146, 2522, 2603
TaaI	ACNGT	4 cut(s)	682, 709, 2425, 2432
TaiI	ACGT	3 cut(s)	1017, 2110, 2341
TaqI	TCGA	6 cut(s)	523, 876, 1052, 1928, 2217, 2354
TaqII	GACCGA	2 cut(s)	205, 1130
TatI	WGTACW	2 cut(s)	574, 2675
TauI	GCSGC	8 cut(s)	193, 202, 205, 269, 385, 463, 547, 1609
TfiI	GAWTC	8 cut(s)	61, 824, 1049, 1691, 1913, 1925, 2024, 2518
Tru1I	TTAA	7 cut(s)	146, 896, 1181, 1665, 1778, 1944, 2787
Tru9I	TTAA	7 cut(s)	146, 896, 1181, 1665, 1778, 1944, 2787
TscAI	CASTG	3 cut(s)	1860, 2020, 2658
TseFI	GTSAC	2 cut(s)	1111, 1340
TseI	GCWGC	7 cut(s)	205, 208, 1831, 2255, 2258, 2261, 2713
Tsp45I	GTSAC	2 cut(s)	1111, 1340
TspGWI	ACGGA	3 cut(s)	1513, 1657, 1663
TspRI	CASTG	3 cut(s)	1860, 2020, 2658
Van91I	CCANNNNNTGG	1 cut(s)	1879
VpaK11BI	GGWCC	4 cut(s)	749, 1970, 2179, 2526
VspI	ATTAAT	1 cut(s)	1665
XapI	RAATTY	6 cut(s)	866, 955, 1036, 1237, 2248, 2267
XbaI	TCTAGA	2 cut(s)	925, 1694
XceI	RCATGY	3 cut(s)	2582, 2690, 2707
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1880, 1988
XmnI	GAANNNNTTC	1 cut(s)	837
XspI	CTAG	8 cut(s)	179, 648, 798, 926, 1338, 1695, 2400, 2673
ZrmI	AGTACT	1 cut(s)	2677
Zsp2I	ATGCAT	1 cut(s)	399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.