AT1G64960

Condensin II non structural maintenance of chromosomes subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0006247
Physical Location & Seq
Forward (+)
24129836 .. 24134204
4369 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G64960.1

Sequence Viewer

Length: 3612 bp
ATGGAGAAAAGGCTCCGGTCATCTCTCAAGACATCCTCCGAAGAATTCCTCTCATCCGCCGTCAAATTAACCCTTAAATCCTCAAAACCCTCACTAAAAACCATCATCAACGCCGTCAAACCTTCCTCTGACCTCTCATCTTCTCTCCCACTCGCTCTTCACAACTCCATCCTCCACCACACAGAATCCTTCCAAAAACTCCTCGACGAAGTTAATAACAACAATACCTATATCCCTTCTCCTTCCAATTCGCCTCCAACGAAACGACACCGTGGTACCACCGGAACCTCACCAGATTCGGATTTGGATCAACGTAAGCATCAGATCCTTGCTTCTCTTCAGATTCTCTCTTATGTTCTTCATTTATGTCTTTTAAATCCGAAGAATGCGTTTCCTACTTCCGATTTACTTCCCGCTGCTCAAGCTTTGCATAATAATCTTAGATTGTTCGAATCGGATTCGGTTTTGTGTCTTGAGATTGCTGGAGTTTGTGAGTGTTGGTGGAAGGAAGGTTTAGTGGGAAGAGAATCTTTGATTTCTCAGTCGTTACCGTTTTTGCTATCGAGGTCATTGACATTGAAGAAGAAAGTTGATGTTCATAGAGTTTATATGCTTAGAGAAGCTTTTACATTGTTTGATTTTGAGGATGAGAGTATAGAAGATCTTAGGATGTTGCTTATGCGGTGTGTTGTTTCGCCGTTGTATGTGAAGACTGAAGATGGTCAGAGATTTGTTTCTTTTGCTTTCGGGCTTAGTCGACAGTTGATGAAATCTGGTCTTGCTGTTGTTAAGGCTCAGATTCCTTTGGGGAGCAAATCTGTGCTTGAAGGTTTTGGTGGGATTTTGTTTAGAGCTTGGAAAGAAGTGGAGTTAGATTTAAAAGGTGAGATTGAAGATGGGTTTTTGCAGGGGATTATTGATAGTGCTATTCACGCTAGTTCGTCCGCCTTTGCTGCCTCGTTAAGGAGGGTTTTAGGCGGGTTTATTAGTCAGCGGACCTCTCAAGGTGTTGAGAAGCTTCTCTTTACTCTTGCTGAGCCTATGATATTTCGCTCGTTACAGGTTGCAAATTCAAATGTTCGTTTAAATGCTTTACATTTGCTTCTGGATCTTTTCCCCATGGAGGATCCAGATGCAACAAAAGAAGCAAAAGATACTCTGCTTGACAAACAGTTCTACTTGTTGGAAAAATTATTGAGTGATGAATGCCCAGATGTGAGGTCTGTTGCTGTGGAAGGTCTCTCTCGAGTTTTCTATCTTTTCTGGGAAGTGATCCCATCAGCAACAATTACCAAGGTCCTCACGAAAATTTTCGATGATATGTCACATGAATCGTGCAGTGAGGTTAGACTTTCAACGGTTAATGGTATAACTTATCTCCTCGCGAACCCACAATCCCATGGCATTCTTAAAGTGATTCTGCCAAGACTGGGGCATTTGATGCTAGATAGTGTTACTTCAGTACGCGTTGCAATGGTAGATCTACTGCTTCTTATACGAGATGTTCGCGCTTTCCAGTTTAACACGGTAGTGAGCTTGGATGTGTTATTATCTGTGCTTGCCTCTGATCAGACTCATGTTGCTAAGGGAATCGCTCGACTGCTAATACCATCATACTTTCCATCACGAAAGAGAGCTGAGGAGGCATGCCAGCGATGTAGGACACTCATAAACAGAAACCCAAAGGCTGGTGCAAGATTTTGCGAATTTTTAGTATCTCTAGGAGCAACCGTTAAATCTGTACTGCACCTTGTTGGATTCTTCTTGAATTCAGTTTTGTCAGGTGATAAGCTATTGGAGAATCAGACTGAAGGCTTGCTTCGTGCTGCGTACTATCTCTGTAAAGATTTGGTTGCTGATTCTGGGTGTATGGCCTCCCTGAAAGAGTTGTTACCTGGAGAAAAATTGAAAAGCTTGCTAGCTTTCGCACCCACTGCACAGGCTCAGTCATCTGTCATTGATATAATCACTATGGTCTCCCCTGATATTGTCTCTGAAGTCCTTGAAGATTGCATGAATTTAGTTGTTAATTGTGGTGGTTTGCCTAGTGATGCAGGACGACAGACGGAGTTGAGATCTGTACACAAGTTACTCCTGTCTTCTAATGCCTTTTGTGACCTCATTGGAACTTTTACCAGTATCATGCAGAAGACTGCGTACCGTTGTCAAATCAATTTTGGCTATGAAGTAGAAAGAAAGAATTTACAGTCCATGAAGAGGAAGAAATCAAAATCCTCTGGAAAATCTTCGGTAAGGTGGAAACATGTTAGCGGAAAAAATGCAATCAGTTTCGAGGAAGATTATTTGGTTGCTGTAGGAATAGCATGGCAAATAAAGGATTTACTCACTACCGAAGATGCACGTAAATCTATACTGGAGTCTGATATTGAGGAGCTGCTCCTTTCCTTAAAAGTCGTCTCACACACTAGCATTTTGCAAGCCACTTGTTGTGAATACATGGACGTGAATCCAGATATTATGGACCAAACAATGGATCACATCCTAGTCTGTACAGATGAACTATTTCAGGCAGGTGACATTGGAACGCCAGGCACCACATCTCCAGAGGCTAACCTTAGCAAGAAACCGACTACAAGTAACGGCAACCAACCAAAACGAAGAAATAGAAATGCTCGTGATGATGCTTCTGAAGGATCAAAGGAAGGAGGTGTACTGAACAAGGTCAAAATGCTAACTGCGATTTTCAAGTTTTTTGTTGAGTCTACAGAGATGGGTCTAGCTTCCAACTTTCAAGCAAGTATGTTTAAGTTTTCATCTGCGTATCTAAAGTATGTCATCTCCATTTTCAACGACCATTCAACCGGTAAGTTAGAATTTGAGGACGCTGATATGAAGGAAATGATTCTGTGTACAAAAAGCTCCACCAGTTATGCCGGAAAGTTCATAAACCTAGTGATGAGACATGCAACCGAAGCTTCACGCCCTTTGTTTGAATCATTTGACCTTGCAAATGACCTGCTTGATCTCTTCACCATGGTTGAGAAATCGTTAGGCTCGGCTTATGCATCAAGAATTGTGTCAGCTTTAAACCCTTGGATTCCAGATTTGGTTCTTGCACTAGGACCTTGTTTCATCAACAACGACAGCGAAGAAAGTTCATACACCAGCTCATTCAACCACATCAAACTCTGCTTTCCTTCATGGCTTCTTACATGTGCGAAGATCGAACTACATGAAATTAACAAAGAAGATGTGACTGAGACCTCGGGTTTCCTGGCATTAAAAAAACTGAGAAACACTATATTTACATTGGTGAAAGGTAACACCAAGGTGTTAGATGCAATTGGTTATGTTCTTTTGTTATGTTTGGCAGTCTGTATAGAGAAGAGGGATTACAGTACGGCTCTCGGGTTGCTACACTTGGTATGTGTGAAGTTGGTAGGTAGTGAAGATAGAGAGTGGAAAGAGCTGGACACAATGTTGGTCTTACTTCCGAGAATTTACCCGATAATAGAGCGAGAGATTGGTGAAGGAAGAGATGAAGATGAAGTGAAGACGCTGGAGGCTGCAAGAGAACTGCTTCAACCTGTGTGGATGTACCATGTCTACGAAACCGGAAGGTTCCACATGATGGATGAGGAAGAAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Condensin2nSMC

Protein Analysis

1203

Amino Acids

134.11

Weight (kDa)

6.03

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Condensin2nSMC PF12422 228 - 376 1.2e-50 Condensin II non structural maintenance of chromosomes subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2522
Acc36I ACCTGC 2 cut(s) 2522, 2985
Acc65I GGTACC 1 cut(s) 275
AccB1I GGYRCC 2 cut(s) 275, 2552
AccB7I CCANNNNNTGG 3 cut(s) 1688, 2491, 3592
AccI GTMKAC 3 cut(s) 757, 2723, 3567
AccII CGCG 3 cut(s) 1385, 1467, 1509
AciI CCGC 7 cut(s) 57, 414, 682, 945, 978, 994, 2271
AclWI GGATC 8 cut(s) 315, 319, 1116, 1121, 1134, 1267, 2502, 2662
AcsI RAATTY 9 cut(s) 44, 1069, 1308, 1706, 1768, 2017, 2200, 2834, 3459
AcuI CTGAAG 6 cut(s) 323, 735, 1443, 1830, 2016, 2670
AfiI CCNNNNNNNGG 7 cut(s) 963, 1123, 1430, 1688, 2217, 2491, 3592
AflIII ACRYGT 3 cut(s) 1465, 2263, 3173
AgeI ACCGGT 1 cut(s) 2822
AjiI CACGTC 1 cut(s) 2464
AjnI CCWGG 3 cut(s) 1894, 2548, 3234
AleI CACNNNNGTG 2 cut(s) 1529, 3290
AloI GAACNNNNNNTCC 2 cut(s) 1379, 1411
Alw26I GTCTC 6 cut(s) 1244, 1981, 1996, 2422, 2914, 3215
AlwI GGATC 8 cut(s) 315, 319, 1116, 1121, 1134, 1267, 2502, 2662
Ama87I CYCGRG 3 cut(s) 1245, 3226, 3368
AoxI GGCC 1 cut(s) 1872
ApeKI GCWGC 5 cut(s) 416, 953, 1826, 2395, 3527
ApoI RAATTY 9 cut(s) 44, 1069, 1308, 1706, 1768, 2017, 2200, 2834, 3459
AsiGI ACCGGT 1 cut(s) 2822
Asp700I GAANNNNTTC 5 cut(s) 1310, 2245, 2523, 2862, 3540
Asp718I GGTACC 1 cut(s) 275
AspLEI GCGC 1 cut(s) 1511
AspS9I GGNCC 4 cut(s) 996, 1297, 2482, 3083
AsuHPI GGTGA 7 cut(s) 282, 896, 1796, 2546, 2983, 3286, 3500
AsuII TTCGAA 1 cut(s) 450
AsuNHI GCTAGC 1 cut(s) 1918
AvaI CYCGRG 3 cut(s) 1245, 3226, 3368
AvaII GGWCC 4 cut(s) 996, 1297, 2482, 3083
BaeI ACNNNNGTAYC 2 cut(s) 259, 292
BamHI GGATCC 1 cut(s) 1126
BanI GGYRCC 2 cut(s) 275, 2552
BarI GAAGNNNNNNTAC 6 cut(s) 2141, 2173, 2655, 2687, 3338, 3370
BauI CACGAG 1 cut(s) 2634
BbsI GAAGAC 4 cut(s) 716, 2091, 2156, 3521
BbvCI CCTCAGC 1 cut(s) 1638
BbvI GCAGC 5 cut(s) 403, 940, 1813, 2382, 3514
BccI CCATC 9 cut(s) 110, 176, 713, 890, 1285, 1618, 1630, 2725, 3586
BceAI ACGGC 5 cut(s) 44, 98, 682, 2617, 3378
BciT130I CCWGG 3 cut(s) 1896, 2550, 3236
BclI TGATCA 1 cut(s) 1567
BcoDI GTCTC 6 cut(s) 1244, 1981, 1996, 2422, 2914, 3215
BfmI CTRYAG 2 cut(s) 2313, 2724
BfuAI ACCTGC 2 cut(s) 2522, 2985
BglII AGATCT 3 cut(s) 661, 1480, 2075
BisI GCNGC 5 cut(s) 417, 954, 1827, 2396, 3528
BlpI GCTNAGC 1 cut(s) 1035
BlsI GCNGC 5 cut(s) 418, 955, 1828, 2397, 3529
Bme1390I CCNGG 3 cut(s) 1896, 2550, 3236
Bme18I GGWCC 4 cut(s) 996, 1297, 2482, 3083
BmeT110I CYCGRG 3 cut(s) 1245, 3226, 3368
BmgBI CACGTC 1 cut(s) 2464
BmgT120I GGNCC 4 cut(s) 996, 1297, 2482, 3083
BmiI GGNNCC 6 cut(s) 14, 277, 286, 1128, 2554, 3584
BmrFI CCNGG 3 cut(s) 1896, 2550, 3236
BmrI ACTGGG 1 cut(s) 1439
BmsI GCATC 8 cut(s) 328, 1123, 1431, 2041, 2347, 2632, 3035, 3289
BmtI GCTAGC 1 cut(s) 1922
BmuI ACTGGG 1 cut(s) 1439
BpiI GAAGAC 4 cut(s) 716, 2091, 2156, 3521
BpmI CTGGAG 5 cut(s) 504, 1917, 2396, 2547, 3542
Bpu10I CCTNAGC 3 cut(s) 1584, 1638, 2576
Bpu1102I GCTNAGC 1 cut(s) 1035
Bpu14I TTCGAA 1 cut(s) 450
BpuEI CTTGAG 4 cut(s) 11, 405, 494, 987
BsaAI YACGTR 1 cut(s) 2363
BsaBI GATNNNNATC 1 cut(s) 306
BsaI GGTCTC 3 cut(s) 1244, 1981, 3215
BsaJI CCNNGG 8 cut(s) 271, 1119, 1293, 1399, 2994, 3053, 3225, 3288
BsaWI WCCGGW 4 cut(s) 15, 281, 2822, 3575
BsaXI ACNNNNNCTCC 4 cut(s) 1716, 1746, 2545, 2575
Bsc4I CCNNNNNNNGG 7 cut(s) 963, 1123, 1430, 1688, 2217, 2491, 3592
Bse118I RCCGGY 1 cut(s) 2822
Bse1I ACTGG 5 cut(s) 1434, 1516, 2136, 2379, 2886
Bse3DI GCAATG 1 cut(s) 1479
Bse8I GATNNNNATC 1 cut(s) 306
BseBI CCWGG 3 cut(s) 1896, 2550, 3236
BseDI CCNNGG 8 cut(s) 271, 1119, 1293, 1399, 2994, 3053, 3225, 3288
BseGI GGATG 9 cut(s) 32, 53, 168, 652, 675, 1546, 2499, 3561, 3601
BseJI GATNNNNATC 1 cut(s) 306
BseLI CCNNNNNNNGG 7 cut(s) 963, 1123, 1430, 1688, 2217, 2491, 3592
BseMI GCAATG 1 cut(s) 1479
BseMII CTCAG 7 cut(s) 554, 809, 1026, 1629, 1958, 3210, 3242
BseNI ACTGG 5 cut(s) 1434, 1516, 2136, 2379, 2886
BseRI GAGGAG 4 cut(s) 191, 1370, 1655, 2405
BseXI GCAGC 5 cut(s) 403, 940, 1813, 2382, 3514
BsgI GTGCAG 3 cut(s) 1357, 1730, 1920
Bsh1236I CGCG 3 cut(s) 1385, 1467, 1509
BshFI GGCC 1 cut(s) 1874
BshNI GGYRCC 2 cut(s) 275, 2552
BshTI ACCGGT 1 cut(s) 2822
BsiHKCI CYCGRG 3 cut(s) 1245, 3226, 3368
BsiSI CCGG 5 cut(s) 16, 282, 2823, 2895, 3576
BslI CCNNNNNNNGG 7 cut(s) 963, 1123, 1430, 1688, 2217, 2491, 3592
BsmAI GTCTC 6 cut(s) 1244, 1981, 1996, 2422, 2914, 3215
BsmBI CGTCTC 1 cut(s) 2422
BsmI GAATGC 3 cut(s) 391, 1211, 1404
BsnI GGCC 1 cut(s) 1874
Bso31I GGTCTC 3 cut(s) 1244, 1981, 3215
BsoBI CYCGRG 3 cut(s) 1245, 3226, 3368
Bsp119I TTCGAA 1 cut(s) 450
Bsp1407I TGTACA 3 cut(s) 2080, 2510, 2870
Bsp1720I GCTNAGC 1 cut(s) 1035
Bsp19I CCATGG 3 cut(s) 1119, 1399, 2994
Bsp68I TCGCGA 1 cut(s) 1385
BspACI CCGC 7 cut(s) 57, 414, 682, 945, 978, 994, 2271
BspANI GGCC 1 cut(s) 1874
BspCNI CTCAG 7 cut(s) 553, 808, 1027, 1630, 1957, 3211, 3243
BspFNI CGCG 3 cut(s) 1385, 1467, 1509
BspLI GGNNCC 6 cut(s) 14, 277, 286, 1128, 2554, 3584
BspMI ACCTGC 2 cut(s) 2522, 2985
BspOI GCTAGC 1 cut(s) 1922
BspPI GGATC 8 cut(s) 315, 319, 1116, 1121, 1134, 1267, 2502, 2662
BspQI GCTCTTC 1 cut(s) 162
BspT104I TTCGAA 1 cut(s) 450
BspT107I GGYRCC 2 cut(s) 275, 2552
BspTNI GGTCTC 3 cut(s) 1244, 1981, 3215
BsrDI GCAATG 1 cut(s) 1479
BsrFI RCCGGY 1 cut(s) 2822
BsrGI TGTACA 3 cut(s) 2080, 2510, 2870
BsrI ACTGG 5 cut(s) 1434, 1516, 2136, 2379, 2886
BssAI RCCGGY 1 cut(s) 2822
BssECI CCNNGG 8 cut(s) 271, 1119, 1293, 1399, 2994, 3053, 3225, 3288
BssSI CACGAG 1 cut(s) 2634
BssT1I CCWWGG 6 cut(s) 1119, 1293, 1399, 2994, 3053, 3288
Bst2BI CACGAG 1 cut(s) 2634
Bst2UI CCWGG 3 cut(s) 1896, 2550, 3236
Bst6I CTCTTC 7 cut(s) 162, 342, 517, 2210, 2993, 3341, 3490
BstAPI GCANNNNNTGC 2 cut(s) 1441, 1934
BstAUI TGTACA 3 cut(s) 2080, 2510, 2870
BstBAI YACGTR 1 cut(s) 2363
BstBI TTCGAA 1 cut(s) 450
BstC8I GCNNGC 7 cut(s) 1560, 1648, 1652, 1817, 1916, 1920, 2439
BstDSI CCRYGG 4 cut(s) 271, 1119, 1399, 2994
BstENI CCTNNNNNAGG 1 cut(s) 961
BstF5I GGATG 9 cut(s) 32, 53, 168, 652, 675, 1546, 2499, 3561, 3601
BstFNI CGCG 3 cut(s) 1385, 1467, 1509
BstHHI GCGC 1 cut(s) 1511
BstMAI GTCTC 6 cut(s) 1244, 1981, 1996, 2422, 2914, 3215
BstMWI GCNNNNNNNGC 7 cut(s) 422, 932, 953, 1441, 1643, 1934, 2933
BstNI CCWGG 3 cut(s) 1896, 2550, 3236
BstNSI RCATGY 4 cut(s) 1650, 2267, 2927, 3177
BstSCI CCNGG 3 cut(s) 1894, 2548, 3234
BstSFI CTRYAG 2 cut(s) 2313, 2724
BstUI CGCG 3 cut(s) 1385, 1467, 1509
BstV1I GCAGC 5 cut(s) 403, 940, 1813, 2382, 3514
BstV2I GAAGAC 4 cut(s) 716, 2091, 2156, 3521
BstX2I RGATCY 6 cut(s) 324, 661, 1108, 1126, 1480, 2075
BstYI RGATCY 6 cut(s) 324, 661, 1108, 1126, 1480, 2075
BsuRI GGCC 1 cut(s) 1874
BtgI CCRYGG 4 cut(s) 271, 1119, 1399, 2994
BtgZI GCGATG 1 cut(s) 1669
BtrI CACGTC 1 cut(s) 2464
BtsCI GGATG 9 cut(s) 32, 53, 168, 652, 675, 1546, 2499, 3561, 3601
BtsI GCAGTG 2 cut(s) 1345, 1932
BtsIMutI CAGTG 2 cut(s) 1345, 1932
BtuMI TCGCGA 1 cut(s) 1385
BveI ACCTGC 2 cut(s) 2522, 2985
Cac8I GCNNGC 7 cut(s) 1560, 1648, 1652, 1817, 1916, 1920, 2439
CfoI GCGC 1 cut(s) 1511
Cfr10I RCCGGY 1 cut(s) 2822
Cfr13I GGNCC 4 cut(s) 996, 1297, 2482, 3083
CseI GACGC 2 cut(s) 2852, 3526
CspAI ACCGGT 1 cut(s) 2822
CspCI CAANNNNNGTGG 2 cut(s) 3533, 3568
DraI TTTAAA 4 cut(s) 375, 879, 1086, 3048
Eam1104I CTCTTC 7 cut(s) 162, 342, 517, 2210, 2993, 3341, 3490
EarI CTCTTC 7 cut(s) 162, 342, 517, 2210, 2993, 3341, 3490
EciI GGCGGA 2 cut(s) 46, 934
Eco130I CCWWGG 6 cut(s) 1119, 1293, 1399, 2994, 3053, 3288
Eco31I GGTCTC 3 cut(s) 1244, 1981, 3215
Eco47I GGWCC 4 cut(s) 996, 1297, 2482, 3083
Eco57I CTGAAG 6 cut(s) 323, 735, 1443, 1830, 2016, 2670
Eco88I CYCGRG 3 cut(s) 1245, 3226, 3368
EcoNI CCTNNNNNAGG 1 cut(s) 961
EcoO109I RGGNCCY 2 cut(s) 1297, 3083
EcoRI GAATTC 2 cut(s) 44, 1768
EcoRII CCWGG 3 cut(s) 1894, 2548, 3234
EcoT14I CCWWGG 6 cut(s) 1119, 1293, 1399, 2994, 3053, 3288
EcoT22I ATGCAT 1 cut(s) 3028
ErhI CCWWGG 6 cut(s) 1119, 1293, 1399, 2994, 3053, 3288
Esp3I CGTCTC 1 cut(s) 2422
FalI AAGNNNNNCTT 6 cut(s) 514, 546, 1007, 1039, 1803, 1835
FauI CCCGC 2 cut(s) 421, 971
FbaI TGATCA 1 cut(s) 1567
FblI GTMKAC 3 cut(s) 757, 2723, 3567
Fnu4HI GCNGC 5 cut(s) 417, 954, 1827, 2396, 3528
FokI GGATG 9 cut(s) 19, 40, 155, 659, 682, 1553, 2486, 3568, 3608
Fsp4HI GCNGC 5 cut(s) 417, 954, 1827, 2396, 3528
GlaI GCGC 1 cut(s) 1510
GluI GCNGC 5 cut(s) 417, 954, 1827, 2396, 3528
GsuI CTGGAG 5 cut(s) 504, 1917, 2396, 2547, 3542
HaeIII GGCC 1 cut(s) 1874
HapII CCGG 5 cut(s) 16, 282, 2823, 2895, 3576
HgaI GACGC 2 cut(s) 2852, 3526
HhaI GCGC 1 cut(s) 1511
Hin6I GCGC 1 cut(s) 1509
HinP1I GCGC 1 cut(s) 1509
HincII GTYRAC 1 cut(s) 758
HindII GTYRAC 1 cut(s) 758
HindIII AAGCTT 5 cut(s) 423, 621, 1016, 1912, 2934
HpaII CCGG 5 cut(s) 16, 282, 2823, 2895, 3576
HphI GGTGA 7 cut(s) 282, 896, 1796, 2546, 2983, 3286, 3500
Hpy166II GTNNAC 6 cut(s) 758, 2083, 2672, 2724, 2871, 3568
Hpy8I GTNNAC 6 cut(s) 758, 2083, 2672, 2724, 2871, 3568
Hpy99I CGWCG 1 cut(s) 209
HpyCH4IV ACGT 3 cut(s) 313, 2362, 2463
HpyF10VI GCNNNNNNNGC 7 cut(s) 422, 932, 953, 1441, 1643, 1934, 2933
HpySE526I ACGT 3 cut(s) 313, 2362, 2463
HspAI GCGC 1 cut(s) 1509
KpnI GGTACC 1 cut(s) 279
Ksp22I TGATCA 1 cut(s) 1567
LguI GCTCTTC 1 cut(s) 162
LmnI GCTCC 6 cut(s) 18, 810, 1724, 2392, 2403, 2885
Lsp1109I GCAGC 5 cut(s) 403, 940, 1813, 2382, 3514
LweI GCATC 8 cut(s) 328, 1123, 1431, 2041, 2347, 2632, 3035, 3289
MaeII ACGT 3 cut(s) 313, 2362, 2463
MfeI CAATTG 1 cut(s) 3303
MflI RGATCY 6 cut(s) 324, 661, 1108, 1126, 1480, 2075
MluI ACGCGT 1 cut(s) 1465
MlyI GAGTC 3 cut(s) 1567, 2387, 2729
MmeI TCCRAC 4 cut(s) 281, 1164, 1735, 2769
Mph1103I ATGCAT 1 cut(s) 3028
MroXI GAANNNNTTC 5 cut(s) 1310, 2245, 2523, 2862, 3540
MslI CAYNNNNRTG 3 cut(s) 1529, 2462, 3290
MspA1I CMGCKG 2 cut(s) 416, 994
MspI CCGG 5 cut(s) 16, 282, 2823, 2895, 3576
MspR9I CCNGG 3 cut(s) 1896, 2550, 3236
MunI CAATTG 1 cut(s) 3303
Mva1269I GAATGC 3 cut(s) 391, 1211, 1404
MvaI CCWGG 3 cut(s) 1896, 2550, 3236
MvnI CGCG 3 cut(s) 1385, 1467, 1509
MwoI GCNNNNNNNGC 7 cut(s) 422, 932, 953, 1441, 1643, 1934, 2933
NcoI CCATGG 3 cut(s) 1119, 1399, 2994
NheI GCTAGC 1 cut(s) 1918
NlaIV GGNNCC 6 cut(s) 14, 277, 286, 1128, 2554, 3584
NmeAIII GCCGAG 1 cut(s) 2996
NmuCI GTSAC 4 cut(s) 1323, 2114, 2534, 3214
NruI TCGCGA 1 cut(s) 1385
NsiI ATGCAT 1 cut(s) 3028
NspI RCATGY 4 cut(s) 1650, 2267, 2927, 3177
NspV TTCGAA 1 cut(s) 450
OliI CACNNNNGTG 2 cut(s) 1529, 3290
PaeI GCATGC 1 cut(s) 1650
PaeR7I CTCGAG 1 cut(s) 1245
PaqCI CACCTGC 1 cut(s) 2522
PciI ACATGT 2 cut(s) 2263, 3173
PciSI GCTCTTC 1 cut(s) 162
PcsI WCGNNNNNNNCGW 1 cut(s) 257
PctI GAATGC 3 cut(s) 391, 1211, 1404
PdmI GAANNNNTTC 5 cut(s) 1310, 2245, 2523, 2862, 3540
PflMI CCANNNNNTGG 3 cut(s) 1688, 2491, 3592
PinAI ACCGGT 1 cut(s) 2822
PkrI GCNGC 5 cut(s) 418, 955, 1828, 2397, 3529
PleI GAGTC 3 cut(s) 1567, 2386, 2728
PpsI GAGTC 3 cut(s) 1567, 2386, 2728
Ppu21I YACGTR 1 cut(s) 2363
PpuMI RGGWCCY 2 cut(s) 1297, 3083
PscI ACATGT 2 cut(s) 2263, 3173
Psp5II RGGWCCY 2 cut(s) 1297, 3083
Psp6I CCWGG 3 cut(s) 1894, 2548, 3234
PspGI CCWGG 3 cut(s) 1894, 2548, 3234
PspN4I GGNNCC 6 cut(s) 14, 277, 286, 1128, 2554, 3584
PspPI GGNCC 4 cut(s) 996, 1297, 2482, 3083
PspPPI RGGWCCY 2 cut(s) 1297, 3083
PsuI RGATCY 6 cut(s) 324, 661, 1108, 1126, 1480, 2075
RruI TCGCGA 1 cut(s) 1385
RseI CAYNNNNRTG 3 cut(s) 1529, 2462, 3290
SalI GTCGAC 1 cut(s) 756
SapI GCTCTTC 1 cut(s) 162
SatI GCNGC 5 cut(s) 417, 954, 1827, 2396, 3528
Sau96I GGNCC 4 cut(s) 996, 1297, 2482, 3083
SchI GAGTC 3 cut(s) 1567, 2387, 2729
ScrFI CCNGG 3 cut(s) 1896, 2550, 3236
SfaNI GCATC 8 cut(s) 328, 1123, 1431, 2041, 2347, 2632, 3035, 3289
SfcI CTRYAG 2 cut(s) 2313, 2724
Sfr274I CTCGAG 1 cut(s) 1245
SfuI TTCGAA 1 cut(s) 450
SinI GGWCC 4 cut(s) 996, 1297, 2482, 3083
SlaI CTCGAG 1 cut(s) 1245
SmiMI CAYNNNNRTG 3 cut(s) 1529, 2462, 3290
SmlI CTYRAG 5 cut(s) 26, 420, 473, 1002, 1245
SmoI CTYRAG 5 cut(s) 26, 420, 473, 1002, 1245
SphI GCATGC 1 cut(s) 1650
SsiI CCGC 7 cut(s) 57, 414, 682, 945, 978, 994, 2271
StyD4I CCNGG 3 cut(s) 1894, 2548, 3234
StyI CCWWGG 6 cut(s) 1119, 1293, 1399, 2994, 3053, 3288
TaiI ACGT 3 cut(s) 316, 2365, 2466
TaqI TCGA 9 cut(s) 204, 450, 563, 757, 1246, 1314, 1597, 2292, 3186
TatI WGTACW 5 cut(s) 1741, 2080, 2510, 2671, 2870
TscAI CASTG 2 cut(s) 1345, 1939
TseFI GTSAC 4 cut(s) 1323, 2114, 2534, 3214
TseI GCWGC 5 cut(s) 416, 953, 1826, 2395, 3527
Tsp45I GTSAC 4 cut(s) 1323, 2114, 2534, 3214
TspGWI ACGGA 1 cut(s) 2081
TspRI CASTG 2 cut(s) 1345, 1939
Van91I CCANNNNNTGG 3 cut(s) 1688, 2491, 3592
VpaK11BI GGWCC 4 cut(s) 996, 1297, 2482, 3083
XagI CCTNNNNNAGG 1 cut(s) 961
XapI RAATTY 9 cut(s) 44, 1069, 1308, 1706, 1768, 2017, 2200, 2834, 3459
XceI RCATGY 4 cut(s) 1650, 2267, 2927, 3177
XhoI CTCGAG 1 cut(s) 1245
XmiI GTMKAC 3 cut(s) 757, 2723, 3567
XmnI GAANNNNTTC 5 cut(s) 1310, 2245, 2523, 2862, 3540
Zsp2I ATGCAT 1 cut(s) 3028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.