Rh2AG401000

Condensin II non structural maintenance of chromosomes subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0006247
Physical Location & Seq
Forward (+)
59866003 .. 59871798
5796 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG401000.1

Sequence Viewer

Length: 3762 bp
ATGGAGAAGCGGCTCCGCTCCTCTCTCCAATCCTCCGCCGAAGAGTTTCTGACCTCCGCCACCAAGCTCAGCCTCAAATCCTCAAAGCCCTCTCTCAAAACCCTAATCCACAAAATCAAACCCTCCTCCGACCTCTCCTCCTCTTTCCCCATCTCTCTCTCCCACTCCATTTCCGACGCCATCCGCTCCCTCCAGACCCTTCTTCTTCAATCCAACCCCAAACCTAACCCTAGATCCCCTCGCTCTCCCCCCACCAAGCGCCCCCGCAGGTCCAGCCGGAGCTCCAAGACCCGACCCGACCGCGAACCCGAACCAGACCTCCATCCGGACCCGAATCCTGAAGAGGATAAGCATCAACTGCTCTCAAAGCTTCAGATTCTCGCCTGTATAGCGCAACTATGCGCTGGGCATCCGGCGAAGGCGTTCCCGCCGTTGGATTTGTTGCCGGGAGTTCAAGCGCTTCACGACAATCTGATAATTCTGGAGTCGGACTCGGCGCTGGTATCGGCGATTGCGAGCTTGTGCGAGCAGTGGTGGAAGGAGGAGTTGCCGGGCCGGGAATCGCTGATTTCTCAGTCCCTCCCTTTCTTGCTCTCGAGATCTCTCACTCTGAACAAGAAGGCAGACGTTCACAGAGTCTACGCCCTCCGCGAGGCTTTCACCTGCTTCGATTTCGAGGACGAGAGCATTGAGGACTTGAAGCTGTTGCTAATCCGGTGCGTGATTTCGCCTCTGTTTCTGAAAACAGAGGAGGGGAGGAAGTTTCTGGCGTTTCTGTTTGGGTTGAGTTCGCAGCTGTTGAAGGAGGTTTTGGCTGTGATCAAGTCTCAGATTCCGTTTGGAAGGAAGTCGATGCTGGAGGCCTACGGTGACGTTTTGTTCCGGGCTTGGAAAGTGGCAGAGGGGGAGCTGAGGAGTGAGATTGAGAACGGGTTCTTGCAGGTTTTGATTGAGGGTGCTATACACGCCACCTCTGGAGCATTTGCTGCATCTATTAGAAGGGTTTTGGGAGGGTTTATAAACCAGAGGACCACTGCTGGTGTCGAGAAGCTTCTTTTCCAGCTCTCCGAGCCTGTCATATTTCGCTCTTTGCAGGTTGCAAATTCTAATGTTCGTCAAAATGCGCTGCATTTACTTTTGGATTTGTTCCCTCTTGAAGATCCTGATTCGACTAAAGAGGTTAAGGATTCATTGCTTGATAAGCAGTTCTTTTTATTGGGGAAATTACTTGTAGATGATTGTCCAGAGGTGAGAGTGGTTGCAGTGGAAGGTTCTTGTCGTATTCTTCATCTGTTTTGGGAAGTAATCCCTTCGCCTACCATCACAAAGTTAGTTACTAGAATTTTTGATGATATGTCACATGATACAAGTCATGAGGTTAGGCTTTCCACACTGAATGGCACTATGTATTTGTTTGGCAATCCTCTATGTCATCAATTTCTCAATGTGCTTCTACCCAGATTGGGGCATTTGATGATGGACAATGTCCTATCAATAAGAGTTGCCATGGTAGATCTCCTCCTTCTCAGAAGGGATATTCAAAACTTCCAGTTCCATAAGGTAGTGAAGTTAGATGTACTATTATCTACCCTTGAAAATGATCAACCTCAAGTTGCTCAGAAAATTACAAGGTTGCTTATGCCATCATACTTTCCCTCAAAAGAAACTGTTGAAACAGCATGCAATCGTTGTACTACACTTGTAAAAAGGTCTCCGATGGCTGGAGCAAGGTTTTGTGAATTTGCTGCGTCCCAAGGGGCATCTCTTAAGTCTCTGATGGAACTTGTTAGGGTAATGATTACTTTGGTCCTTCCACCTAATAATCTGGATGAACAACAAGTTGAGGGTTTACTTACTTCTTCTTCCAACCTTTGCAATACCCTAGCTGGTGATCCAGTTTTCAAGAAGGAGCTTAAAGAATTCTTTGATGGTGAAAAGTTGAAGTACTTGATTGCTGCCGCACCTACCGGGCCTGCTCAGTCTTGTGTATTCAACATTGTTTCAACTGTCTCTCCTGATGATGTGGCTGGACTTCTTGATGAATGTATGCATCTGGTGACTAATTGTAGTGGTTTATCCAAAAATGTGGAGAAGCAATCTGAAGTGAGGTCTGCTCACAATTTGTTGCTGTCTTGTGATGCGATTGATGGTATGCTGGAAGCTCTAACAGCACTTCTGCAGAAATCAGCCTATCGTTGCCATATTAAATATGGCAGTGAAATTAAGAACTTAAGTGTTTTCTCTGCGAAAAGAAAGAAATCAAAGTCCTCTGGCAAAATTTCAGCTCGACAGAAACATGTTAGTGGAAAAAAAGTCACCAGTTTTGAGGACGATTATTCAGTCGCGGCAGGAATAGCCTGGCAAATCAGGGACTTGCTTGTATCTGTCAATACTCGGAAGGCTATATTGGGATCTCAAACTCTAGAATCTTTACTAATATGTCTAAAGGTCATTTCTGAGGTCAGCATTGTGCAGTGCATGGATTATGAATATGTGGACACATTTCCTGTTTCAGCATATACAGCTCTTGCGCTGCATTTGTCGCTTCAAAATGTCTCTTCCAATAAGAATGATGGGACAGATTCATCAGGGTCTACTTTGGAGCAGACTGAGTTGGAACAGGCATTGGATCATGTGCTTAATTGTACAGAGAAGCTATGTGGAATAGGCGATTCTGGACAGTCTAGCAGAGTTTATTCAGAATCTAAGCATGCTATTGATAAGTCTGCGAGTCGTCGTGAAAAAAGGCACAGAGAACCTCAAACACATGCCTCCATTGCAAGTGATAGTGGAAATGTATATACTGAACCAAAGAAGTTGGCGAACAAGGTGAAGATGCTTACTGCAGTCCAAAGGTTCATGGTTGATGCTGCTACAATAGGTTTTGCTCCACAAACTCTGGAAAGGTGCTTAAGATCCACATCAGGTTATATACGATGTGTCATATCTACTTTGGAGCAACAACCTCATGAGCAAATTGATTTTAAGGAGGAAGATTTGAAGGATGTAGTTCTCTGTTTGAAAAGCTCCTCCACCTATGCAGCAAAGTTACTTAATCTAGCTCTTAAAGATGCTACTGAAACTTCACCACCTCCAGCAGAAGCTTCTGATCTTGCCAACGATATGCTTGATTTAATTATCTCGATTGAATTATACTTGGGCTCAACCTATGCTGGACATGTGGTGGCAGCAGTGAAGCCTTGGGTTCCTGACTTGATTTTGGCATTAGGATCTGGGCACATTATGAAACAGATTATAGGAGAAGAGTGTCAAACGAGTCCAGCTGATCGCATCAGAGTCCACTTTCCATCATGGCTCTTAATTTTAGCCGAGACTGAGCTCTCTGAAGCTAGTGAAGTCCGGCCAGAAGATGACGGAGACTCTGAACCTGAGGAGTTTCCTGCTTTCAAAAAACTTCTTACAATGATTGTCAAATTGTTAAAAGAAAATCTCAGCATGCAGGGTGTGTTTGGGGCGATCTTCATGATTGGCGCAATAGTAGGGCTGGAAAAGAAAAATTTTGGGCTGGTTTTTGGACTTCTACAGTTTGTATGCCTGAAGATATTCAAGCATGATGATAGAGAATGGGGTGATTTGATGTTGGCATTTCTGCAAGATATCTACCCTCAGATCGAGAGAGAAATTGAGGAAGAGTGTGATGAAGATGGAAGGGAAAAACTGGAAAAAGCCAAGGACTTGCTGGAACCTATTTGGTTGTATCATCTGCATGAAACTGGGAGGGTCTCTATGATGGAGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Condensin2nSMC

Protein Analysis

1253

Amino Acids

139.47

Weight (kDa)

5.98

Isoelectric Point (pI)

52.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Condensin2nSMC PF12422 239 - 387 2.1e-56 Condensin II non structural maintenance of chromosomes subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1019
AarI CACCTGC 1 cut(s) 671
Acc36I ACCTGC 4 cut(s) 258, 671, 931, 1084
AccBSI CCGCTC 2 cut(s) 18, 186
AccI GTMKAC 2 cut(s) 639, 2594
AccII CGCG 3 cut(s) 303, 651, 2345
AccIII TCCGGA 1 cut(s) 325
AclWI GGATC 7 cut(s) 228, 1154, 1886, 2419, 2637, 2910, 3238
AcoI YGGCCR 1 cut(s) 3362
AcsI RAATTY 6 cut(s) 1102, 1341, 1739, 1919, 2277, 3517
AcuI CTGAAG 5 cut(s) 356, 360, 2121, 3366, 3578
AcyI GRCGYC 1 cut(s) 177
AfaI GTAC 4 cut(s) 1578, 1693, 1946, 2647
AfeI AGCGCT 1 cut(s) 459
AfiI CCNNNNNNNGG 6 cut(s) 325, 433, 652, 1463, 1464, 1721
AflII CTTAAG 3 cut(s) 1766, 2230, 2911
AflIII ACRYGT 2 cut(s) 2296, 3178
AjnI CCWGG 1 cut(s) 2357
AjuI GAANNNNNNNTTGG 4 cut(s) 794, 826, 2390, 2422
AloI GAACNNNNNNTCC 2 cut(s) 303, 335
Alw21I GWGCWC 2 cut(s) 284, 3342
Alw26I GTCTC 8 cut(s) 831, 1716, 1776, 2014, 2560, 3326, 3372, 3748
AlwI GGATC 7 cut(s) 228, 1154, 1886, 2419, 2637, 2910, 3238
Ama87I CYCGRG 1 cut(s) 595
Aor13HI TCCGGA 1 cut(s) 325
Aor51HI AGCGCT 1 cut(s) 459
AoxI GGCC 4 cut(s) 553, 861, 1970, 3362
ApeKI GCWGC 9 cut(s) 793, 986, 1126, 1745, 1955, 2533, 2870, 3041, 3188
ApoI RAATTY 6 cut(s) 1102, 1341, 1739, 1919, 2277, 3517
Asp700I GAANNNNTTC 4 cut(s) 45, 422, 932, 3563
AspLEI GCGC 8 cut(s) 261, 394, 404, 460, 499, 1126, 2533, 3494
AspS9I GGNCC 6 cut(s) 270, 328, 553, 1029, 1807, 1970
AsuC2I CCSGG 5 cut(s) 447, 552, 557, 884, 1969
AvaI CYCGRG 1 cut(s) 595
AvaII GGWCC 4 cut(s) 270, 328, 1029, 1807
AxyI CCTNAGG 1 cut(s) 3390
BaeGI GKGCMC 1 cut(s) 3240
BanII GRGCYC 3 cut(s) 284, 3164, 3342
Bbv12I GWGCWC 2 cut(s) 284, 3342
BbvCI CCTCAGC 1 cut(s) 911
BbvI GCAGC 9 cut(s) 805, 973, 1113, 1732, 1942, 2520, 2857, 3053, 3200
BceAI ACGGC 1 cut(s) 415
BciT130I CCWGG 1 cut(s) 2359
BclI TGATCA 2 cut(s) 819, 1600
BcnI CCSGG 5 cut(s) 447, 552, 557, 884, 1969
BcoDI GTCTC 8 cut(s) 831, 1716, 1776, 2014, 2560, 3326, 3372, 3748
BfaI CTAG 7 cut(s) 231, 1338, 1883, 2423, 2685, 3059, 3351
BfmI CTRYAG 3 cut(s) 2177, 2844, 3542
BfoI RGCGCY 3 cut(s) 262, 461, 500
BfrI CTTAAG 3 cut(s) 1766, 2230, 2911
BfuAI ACCTGC 4 cut(s) 258, 671, 931, 1084
BglII AGATCT 2 cut(s) 599, 1513
BlpI GCTNAGC 1 cut(s) 68
BmcAI AGTACT 1 cut(s) 1946
Bme1390I CCNGG 6 cut(s) 447, 552, 557, 884, 1969, 2359
Bme18I GGWCC 4 cut(s) 270, 328, 1029, 1807
BmeT110I CYCGRG 1 cut(s) 595
BmgT120I GGNCC 6 cut(s) 270, 328, 553, 1029, 1807, 1970
BmiI GGNNCC 4 cut(s) 14, 330, 3207, 3705
BmrFI CCNGG 6 cut(s) 447, 552, 557, 884, 1969, 2359
BmrI ACTGGG 1 cut(s) 3744
BmuI ACTGGG 1 cut(s) 3744
BplI GAGNNNNNCTC 4 cut(s) 476, 508, 2098, 2130
BpmI CTGGAG 6 cut(s) 176, 503, 878, 996, 1743, 3078
Bpu10I CCTNAGC 1 cut(s) 911
Bpu1102I GCTNAGC 1 cut(s) 68
BpuEI CTTGAG 1 cut(s) 1593
BpuMI CCSGG 5 cut(s) 447, 552, 557, 884, 1969
BsaBI GATNNNNATC 2 cut(s) 351, 2920
BsaHI GRCGYC 1 cut(s) 177
BsaI GGTCTC 2 cut(s) 1716, 3748
BsaJI CCNNGG 4 cut(s) 1506, 1753, 3200, 3690
BsaWI WCCGGW 2 cut(s) 325, 714
BsaXI ACNNNNNCTCC 6 cut(s) 122, 152, 303, 333, 1996, 2026
Bsc4I CCNNNNNNNGG 6 cut(s) 325, 433, 652, 1463, 1464, 1721
Bse1I ACTGG 5 cut(s) 1549, 1895, 2319, 3684, 3739
Bse21I CCTNAGG 1 cut(s) 3390
Bse3DI GCAATG 2 cut(s) 1190, 2775
Bse8I GATNNNNATC 2 cut(s) 351, 2920
BseAI TCCGGA 1 cut(s) 325
BseBI CCWGG 1 cut(s) 2359
BseDI CCNNGG 4 cut(s) 1506, 1753, 3200, 3690
BseGI GGATG 5 cut(s) 180, 322, 409, 1834, 3010
BseJI GATNNNNATC 2 cut(s) 351, 2920
BseLI CCNNNNNNNGG 6 cut(s) 325, 433, 652, 1463, 1464, 1721
BseMI GCAATG 2 cut(s) 1190, 2775
BseNI ACTGG 5 cut(s) 1549, 1895, 2319, 3684, 3739
BseSI GKGCMC 1 cut(s) 3240
BseXI GCAGC 9 cut(s) 805, 973, 1113, 1732, 1942, 2520, 2857, 3053, 3200
BseYI CCCAGC 1 cut(s) 404
BsgI GTGCAG 1 cut(s) 2492
Bsh1236I CGCG 3 cut(s) 303, 651, 2345
Bsh1285I CGRYCG 1 cut(s) 301
BshFI GGCC 4 cut(s) 555, 863, 1972, 3364
BsiEI CGRYCG 1 cut(s) 301
BsiHKAI GWGCWC 2 cut(s) 284, 3342
BsiHKCI CYCGRG 1 cut(s) 595
BslFI GGGAC 4 cut(s) 562, 1735, 2384, 2590
BslI CCNNNNNNNGG 6 cut(s) 325, 433, 652, 1463, 1464, 1721
BsmAI GTCTC 8 cut(s) 831, 1716, 1776, 2014, 2560, 3326, 3372, 3748
BsmFI GGGAC 4 cut(s) 562, 1735, 2384, 2590
BsnI GGCC 4 cut(s) 555, 863, 1972, 3364
Bso31I GGTCTC 2 cut(s) 1716, 3748
BsoBI CYCGRG 1 cut(s) 595
Bsp1286I GDGCHC 4 cut(s) 284, 3164, 3240, 3342
Bsp13I TCCGGA 1 cut(s) 325
Bsp1407I TGTACA 1 cut(s) 2645
Bsp1720I GCTNAGC 1 cut(s) 68
Bsp19I CCATGG 1 cut(s) 1506
BspANI GGCC 4 cut(s) 555, 863, 1972, 3364
BspEI TCCGGA 1 cut(s) 325
BspFNI CGCG 3 cut(s) 303, 651, 2345
BspHI TCATGA 3 cut(s) 1372, 2968, 3483
BspLI GGNNCC 4 cut(s) 14, 330, 3207, 3705
BspMAI CTGCAG 2 cut(s) 2181, 2848
BspMI ACCTGC 4 cut(s) 258, 671, 931, 1084
BspPI GGATC 7 cut(s) 228, 1154, 1886, 2419, 2637, 2910, 3238
BspTI CTTAAG 3 cut(s) 1766, 2230, 2911
BspTNI GGTCTC 2 cut(s) 1716, 3748
BsrBI CCGCTC 2 cut(s) 18, 186
BsrDI GCAATG 2 cut(s) 1190, 2775
BsrGI TGTACA 1 cut(s) 2645
BsrI ACTGG 5 cut(s) 1549, 1895, 2319, 3684, 3739
BssECI CCNNGG 4 cut(s) 1506, 1753, 3200, 3690
BssNI GRCGYC 1 cut(s) 177
BssT1I CCWWGG 4 cut(s) 1506, 1753, 3200, 3690
Bst2UI CCWGG 1 cut(s) 2359
Bst4CI ACNGT 5 cut(s) 869, 1669, 2008, 2682, 3546
Bst6I CTCTTC 5 cut(s) 36, 336, 2563, 3258, 3645
BstACI GRCGYC 1 cut(s) 177
BstAFI CTTAAG 3 cut(s) 1766, 2230, 2911
BstAPI GCANNNNNTGC 2 cut(s) 358, 986
BstAUI TGTACA 1 cut(s) 2645
BstC8I GCNNGC 6 cut(s) 517, 527, 1681, 1974, 2712, 3458
BstDSI CCRYGG 1 cut(s) 1506
BstENI CCTNNNNNAGG 1 cut(s) 650
BstF5I GGATG 5 cut(s) 180, 322, 409, 1834, 3010
BstFNI CGCG 3 cut(s) 303, 651, 2345
BstH2I RGCGCY 3 cut(s) 262, 461, 500
BstHHI GCGC 8 cut(s) 261, 394, 404, 460, 499, 1126, 2533, 3494
BstMAI GTCTC 8 cut(s) 831, 1716, 1776, 2014, 2560, 3326, 3372, 3748
BstMCI CGRYCG 1 cut(s) 301
BstNI CCWGG 1 cut(s) 2359
BstNSI RCATGY 6 cut(s) 1683, 2300, 2714, 2771, 3182, 3460
BstSCI CCNGG 6 cut(s) 445, 550, 555, 882, 1967, 2357
BstSFI CTRYAG 3 cut(s) 2177, 2844, 3542
BstSLI GKGCMC 1 cut(s) 3240
BstUI CGCG 3 cut(s) 303, 651, 2345
BstV1I GCAGC 9 cut(s) 805, 973, 1113, 1732, 1942, 2520, 2857, 3053, 3200
BstX2I RGATCY 7 cut(s) 233, 599, 1159, 1513, 2411, 2915, 3230
BstXI CCANNNNNNTGG 1 cut(s) 2086
BstYI RGATCY 7 cut(s) 233, 599, 1159, 1513, 2411, 2915, 3230
Bsu36I CCTNAGG 1 cut(s) 3390
BsuRI GGCC 4 cut(s) 555, 863, 1972, 3364
BtgI CCRYGG 1 cut(s) 1506
BtsCI GGATG 5 cut(s) 180, 322, 409, 1834, 3010
BtsI GCAGTG 6 cut(s) 536, 1032, 1269, 2221, 2480, 3198
BtsIMutI CAGTG 7 cut(s) 536, 1032, 1269, 1391, 2221, 2480, 3198
BveI ACCTGC 4 cut(s) 258, 671, 931, 1084
Cac8I GCNNGC 6 cut(s) 517, 527, 1681, 1974, 2712, 3458
CciI TCATGA 3 cut(s) 1372, 2968, 3483
CfoI GCGC 8 cut(s) 261, 394, 404, 460, 499, 1126, 2533, 3494
Cfr13I GGNCC 6 cut(s) 270, 328, 553, 1029, 1807, 1970
CseI GACGC 2 cut(s) 185, 1737
Csp6I GTAC 4 cut(s) 1577, 1692, 1945, 2646
CviQI GTAC 4 cut(s) 1577, 1692, 1945, 2646
EaeI YGGCCR 1 cut(s) 3362
Eam1104I CTCTTC 5 cut(s) 36, 336, 2563, 3258, 3645
EarI CTCTTC 5 cut(s) 36, 336, 2563, 3258, 3645
EciI GGCGGA 2 cut(s) 25, 46
Ecl136II GAGCTC 2 cut(s) 282, 3340
Eco130I CCWWGG 4 cut(s) 1506, 1753, 3200, 3690
Eco147I AGGCCT 1 cut(s) 863
Eco24I GRGCYC 3 cut(s) 284, 3164, 3342
Eco31I GGTCTC 2 cut(s) 1716, 3748
Eco32I GATATC 1 cut(s) 3619
Eco47I GGWCC 4 cut(s) 270, 328, 1029, 1807
Eco47III AGCGCT 1 cut(s) 459
Eco53kI GAGCTC 2 cut(s) 282, 3340
Eco57I CTGAAG 5 cut(s) 356, 360, 2121, 3366, 3578
Eco81I CCTNAGG 1 cut(s) 3390
Eco88I CYCGRG 1 cut(s) 595
EcoICRI GAGCTC 2 cut(s) 282, 3340
EcoNI CCTNNNNNAGG 1 cut(s) 650
EcoRI GAATTC 1 cut(s) 1919
EcoRII CCWGG 1 cut(s) 2357
EcoRV GATATC 1 cut(s) 3619
EcoT14I CCWWGG 4 cut(s) 1506, 1753, 3200, 3690
EcoT22I ATGCAT 1 cut(s) 2052
EcoT38I GRGCYC 3 cut(s) 284, 3164, 3342
ErhI CCWWGG 4 cut(s) 1506, 1753, 3200, 3690
FalI AAGNNNNNCTT 2 cut(s) 1193, 1225
FaqI GGGAC 4 cut(s) 562, 1735, 2384, 2590
FauI CCCGC 2 cut(s) 272, 435
FbaI TGATCA 2 cut(s) 819, 1600
FblI GTMKAC 2 cut(s) 639, 2594
FokI GGATG 5 cut(s) 167, 309, 396, 1841, 3017
FriOI GRGCYC 3 cut(s) 284, 3164, 3342
FspBI CTAG 7 cut(s) 231, 1338, 1883, 2423, 2685, 3059, 3351
GlaI GCGC 8 cut(s) 260, 393, 403, 459, 498, 1125, 2532, 3493
GsaI CCCAGC 1 cut(s) 408
GsuI CTGGAG 6 cut(s) 176, 503, 878, 996, 1743, 3078
HaeII RGCGCY 3 cut(s) 262, 461, 500
HaeIII GGCC 4 cut(s) 555, 863, 1972, 3364
HgaI GACGC 2 cut(s) 185, 1737
HhaI GCGC 8 cut(s) 261, 394, 404, 460, 499, 1126, 2533, 3494
Hin1I GRCGYC 1 cut(s) 177
Hin6I GCGC 8 cut(s) 259, 392, 402, 458, 497, 1124, 2531, 3492
HinP1I GCGC 8 cut(s) 259, 392, 402, 458, 497, 1124, 2531, 3492
HindIII AAGCTT 3 cut(s) 368, 1049, 3102
Hpy166II GTNNAC 6 cut(s) 631, 640, 1850, 2497, 2595, 3301
Hpy8I GTNNAC 6 cut(s) 631, 640, 1850, 2497, 2595, 3301
Hpy99I CGWCG 2 cut(s) 179, 2739
HpyCH4III ACNGT 5 cut(s) 869, 1669, 2008, 2682, 3546
HpyCH4IV ACGT 2 cut(s) 627, 873
HpySE526I ACGT 2 cut(s) 627, 873
Hsp92I GRCGYC 1 cut(s) 177
HspAI GCGC 8 cut(s) 259, 392, 402, 458, 497, 1124, 2531, 3492
Kpn2I TCCGGA 1 cut(s) 325
Ksp22I TGATCA 2 cut(s) 819, 1600
Lsp1109I GCAGC 9 cut(s) 805, 973, 1113, 1732, 1942, 2520, 2857, 3053, 3200
MaeI CTAG 7 cut(s) 231, 1338, 1883, 2423, 2685, 3059, 3351
MaeII ACGT 2 cut(s) 627, 873
MaeIII GTNAC 6 cut(s) 869, 1333, 1356, 2056, 2314, 3048
MbiI CCGCTC 2 cut(s) 18, 186
MflI RGATCY 7 cut(s) 233, 599, 1159, 1513, 2411, 2915, 3230
MhlI GDGCHC 4 cut(s) 284, 3164, 3240, 3342
MlyI GAGTC 7 cut(s) 485, 494, 645, 2740, 3286, 3306, 3374
MmeI TCCRAC 7 cut(s) 153, 198, 237, 414, 468, 1890, 2595
Mph1103I ATGCAT 1 cut(s) 2052
MroI TCCGGA 1 cut(s) 325
MroXI GAANNNNTTC 4 cut(s) 45, 422, 932, 3563
MslI CAYNNNNRTG 2 cut(s) 2301, 3726
MspA1I CMGCKG 2 cut(s) 796, 3284
MspCI CTTAAG 3 cut(s) 1766, 2230, 2911
MspR9I CCNGG 6 cut(s) 447, 552, 557, 884, 1969, 2359
MvaI CCWGG 1 cut(s) 2359
MvnI CGCG 3 cut(s) 303, 651, 2345
NciI CCSGG 5 cut(s) 447, 552, 557, 884, 1969
NcoI CCATGG 1 cut(s) 1506
NlaIV GGNNCC 4 cut(s) 14, 330, 3207, 3705
NmeAIII GCCGAG 2 cut(s) 473, 3355
NmuCI GTSAC 4 cut(s) 869, 1356, 2056, 2314
NsiI ATGCAT 1 cut(s) 2052
NspI RCATGY 6 cut(s) 1683, 2300, 2714, 2771, 3182, 3460
PaeI GCATGC 3 cut(s) 1683, 2714, 3460
PaeR7I CTCGAG 1 cut(s) 595
PagI TCATGA 3 cut(s) 1372, 2968, 3483
PaqCI CACCTGC 1 cut(s) 671
PceI AGGCCT 1 cut(s) 863
PciI ACATGT 2 cut(s) 2296, 3178
PcsI WCGNNNNNNNCGW 2 cut(s) 512, 648
PdmI GAANNNNTTC 4 cut(s) 45, 422, 932, 3563
PflFI GACNNNGTC 1 cut(s) 1484
PleI GAGTC 7 cut(s) 485, 493, 644, 2739, 3285, 3305, 3374
PpsI GAGTC 7 cut(s) 485, 493, 644, 2739, 3285, 3305, 3374
PscI ACATGT 2 cut(s) 2296, 3178
PsiI TTATAA 1 cut(s) 1019
Psp124BI GAGCTC 2 cut(s) 284, 3342
Psp6I CCWGG 1 cut(s) 2357
PspFI CCCAGC 1 cut(s) 404
PspGI CCWGG 1 cut(s) 2357
PspN4I GGNNCC 4 cut(s) 14, 330, 3207, 3705
PspPI GGNCC 6 cut(s) 270, 328, 553, 1029, 1807, 1970
PstI CTGCAG 2 cut(s) 2181, 2848
PsuI RGATCY 7 cut(s) 233, 599, 1159, 1513, 2411, 2915, 3230
PsyI GACNNNGTC 1 cut(s) 1484
PvuII CAGCTG 2 cut(s) 796, 3284
RsaI GTAC 4 cut(s) 1578, 1693, 1946, 2647
RsaNI GTAC 4 cut(s) 1577, 1692, 1945, 2646
RseI CAYNNNNRTG 2 cut(s) 2301, 3726
SacI GAGCTC 2 cut(s) 284, 3342
Sau96I GGNCC 6 cut(s) 270, 328, 553, 1029, 1807, 1970
ScaI AGTACT 1 cut(s) 1946
SchI GAGTC 7 cut(s) 485, 494, 645, 2740, 3286, 3306, 3374
ScrFI CCNGG 6 cut(s) 447, 552, 557, 884, 1969, 2359
SduI GDGCHC 4 cut(s) 284, 3164, 3240, 3342
SfcI CTRYAG 3 cut(s) 2177, 2844, 3542
Sfr274I CTCGAG 1 cut(s) 595
SinI GGWCC 4 cut(s) 270, 328, 1029, 1807
SlaI CTCGAG 1 cut(s) 595
SmiMI CAYNNNNRTG 2 cut(s) 2301, 3726
SmlI CTYRAG 5 cut(s) 595, 1608, 1766, 2230, 2911
SmoI CTYRAG 5 cut(s) 595, 1608, 1766, 2230, 2911
SphI GCATGC 3 cut(s) 1683, 2714, 3460
SseBI AGGCCT 1 cut(s) 863
SspMI CTAG 7 cut(s) 231, 1338, 1883, 2423, 2685, 3059, 3351
SstI GAGCTC 2 cut(s) 284, 3342
StuI AGGCCT 1 cut(s) 863
StyD4I CCNGG 6 cut(s) 445, 550, 555, 882, 1967, 2357
StyI CCWWGG 4 cut(s) 1506, 1753, 3200, 3690
TaaI ACNGT 5 cut(s) 869, 1669, 2008, 2682, 3546
TaiI ACGT 2 cut(s) 630, 876
TaqI TCGA 9 cut(s) 596, 669, 675, 851, 1044, 1169, 2287, 3143, 3633
TatI WGTACW 4 cut(s) 1576, 1691, 1944, 2645
TauI GCSGC 3 cut(s) 13, 1961, 2348
TscAI CASTG 7 cut(s) 536, 1039, 1269, 1398, 2221, 2480, 3198
TseFI GTSAC 4 cut(s) 869, 1356, 2056, 2314
TseI GCWGC 9 cut(s) 793, 986, 1126, 1745, 1955, 2533, 2870, 3041, 3188
Tsp45I GTSAC 4 cut(s) 869, 1356, 2056, 2314
TspGWI ACGGA 2 cut(s) 825, 3390
TspRI CASTG 7 cut(s) 536, 1039, 1269, 1398, 2221, 2480, 3198
Tth111I GACNNNGTC 1 cut(s) 1484
Vha464I CTTAAG 3 cut(s) 1766, 2230, 2911
VpaK11BI GGWCC 4 cut(s) 270, 328, 1029, 1807
XagI CCTNNNNNAGG 1 cut(s) 650
XapI RAATTY 6 cut(s) 1102, 1341, 1739, 1919, 2277, 3517
XbaI TCTAGA 1 cut(s) 2422
XceI RCATGY 6 cut(s) 1683, 2300, 2714, 2771, 3182, 3460
XcmI CCANNNNNNNNNTGG 2 cut(s) 2207, 3697
XhoI CTCGAG 1 cut(s) 595
XmiI GTMKAC 2 cut(s) 639, 2594
XmnI GAANNNNTTC 4 cut(s) 45, 422, 932, 3563
XspI CTAG 7 cut(s) 231, 1338, 1883, 2423, 2685, 3059, 3351
ZrmI AGTACT 1 cut(s) 1946
Zsp2I ATGCAT 1 cut(s) 2052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.