Condensin II non structural maintenance of chromosomes subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64960 AT1G64960 |
| fragaria_vesca | FvH4_6g31560 FvH4_6g31560 |
| malus_domestica | MD02G1184600.v1.1 |
| prunus_persica | Prupe.6G221900_v2.0.a1 Prupe.6G221900_v2.0.a1 Prupe.6G221900_v2.0.a1 Prupe.6G221900_v2.0.a1 Prupe.6G221900_v2.0.a1 |
| pyrus_communis | pycom02g14970 |
| rosa_chinensis | RchiOBHm_Chr2g0138631 |
| rosa_laevigata | RLG00000019748 |
| rosa_multiflora | Rmu_sc0009453.1_g000003 Rmu_ssc0000210.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00106050 Rroxscaffold_2G00106190 Rroxscaffold_2G00106270 |
| rosa_rugosa | Rorug02G0351800 |
| rosa_samantha | Rh2AG401000 Rh2BG406500 Rh2BG407600 Rh2CG387100 Rh2DG420900 Rh2DG421300 |
| rosa_wichuraiana | Rw2G032560 Rw2G032600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1013 |
| AarI | CACCTGC | 3 cut(s) | 2619, 2633, 2871 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3404 |
| AatII | GACGTC | 1 cut(s) | 624 |
| Acc16I | TGCGCA | 1 cut(s) | 3153 |
| Acc36I | ACCTGC | 4 cut(s) | 1078, 2619, 2633, 2871 |
| AccB1I | GGYRCC | 1 cut(s) | 1856 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1555, 2762 |
| AccBSI | CCGCTC | 1 cut(s) | 92 |
| AccI | GTMKAC | 1 cut(s) | 633 |
| AccII | CGCG | 2 cut(s) | 645, 1275 |
| AccIII | TCCGGA | 2 cut(s) | 267, 3509 |
| AciI | CCGC | 8 cut(s) | 10, 90, 617, 643, 1256, 1955, 2624, 3468 |
| AclWI | GGATC | 6 cut(s) | 24, 311, 1148, 2556, 2613, 3214 |
| AcoI | YGGCCR | 2 cut(s) | 1224, 3211 |
| AcsI | RAATTY | 8 cut(s) | 44, 1096, 1431, 1537, 1900, 2201, 2271, 3493 |
| AcuI | CTGAAG | 5 cut(s) | 626, 1955, 2115, 3017, 3554 |
| AcyI | GRCGYC | 1 cut(s) | 621 |
| AfaI | GTAC | 2 cut(s) | 3131, 3519 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 294, 1457, 1458, 1555, 1715, 2762, 3477 |
| AflIII | ACRYGT | 1 cut(s) | 2493 |
| AjiI | CACGTC | 1 cut(s) | 2496 |
| AjnI | CCWGG | 3 cut(s) | 336, 2046, 2351 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 788, 820, 2384, 2416, 3485, 3517 |
| AleI | CACNNNNGTG | 1 cut(s) | 2078 |
| Alw21I | GWGCWC | 3 cut(s) | 56, 1972, 3005 |
| AlwI | GGATC | 6 cut(s) | 24, 311, 1148, 2556, 2613, 3214 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 454 |
| Ama87I | CYCGRG | 1 cut(s) | 2943 |
| Aor13HI | TCCGGA | 2 cut(s) | 267, 3509 |
| AoxI | GGCC | 4 cut(s) | 648, 1224, 3211, 3338 |
| ApoI | RAATTY | 8 cut(s) | 44, 1096, 1431, 1537, 1900, 2201, 2271, 3493 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2618, 2650 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 755, 2668, 3494, 3539 |
| AspA2I | CCTAGG | 1 cut(s) | 227 |
| AspLEI | GCGC | 4 cut(s) | 264, 454, 1120, 3154 |
| AspS9I | GGNCC | 4 cut(s) | 285, 297, 1023, 2732 |
| AsuC2I | CCSGG | 3 cut(s) | 295, 441, 546 |
| AsuII | TTCGAA | 1 cut(s) | 1534 |
| AsuNHI | GCTAGC | 1 cut(s) | 2690 |
| AvaI | CYCGRG | 1 cut(s) | 2943 |
| AvaII | GGWCC | 4 cut(s) | 285, 297, 1023, 2732 |
| AvrII | CCTAGG | 1 cut(s) | 227 |
| AxyI | CCTNAGG | 3 cut(s) | 1239, 2736, 2828 |
| BalI | TGGCCA | 1 cut(s) | 3213 |
| BanI | GGYRCC | 1 cut(s) | 1856 |
| BanII | GRGCYC | 3 cut(s) | 56, 3005, 3140 |
| BauI | CACGAG | 1 cut(s) | 1367 |
| BbsI | GAAGAC | 2 cut(s) | 693, 1968 |
| Bbv12I | GWGCWC | 3 cut(s) | 56, 1972, 3005 |
| BbvCI | CCTCAGC | 2 cut(s) | 34, 3428 |
| BceAI | ACGGC | 1 cut(s) | 409 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 635, 669, 3082, 3116 |
| BciT130I | CCWGG | 3 cut(s) | 338, 2048, 2353 |
| BclI | TGATCA | 2 cut(s) | 468, 1594 |
| BcnI | CCSGG | 3 cut(s) | 295, 441, 546 |
| BfmI | CTRYAG | 4 cut(s) | 1085, 2171, 2820, 3255 |
| BfoI | RGCGCY | 2 cut(s) | 265, 455 |
| BfuAI | ACCTGC | 4 cut(s) | 1078, 2619, 2633, 2871 |
| BglII | AGATCT | 2 cut(s) | 1507, 2518 |
| BlnI | CCTAGG | 1 cut(s) | 227 |
| BlpI | GCTNAGC | 1 cut(s) | 55 |
| Bme1390I | CCNGG | 6 cut(s) | 295, 338, 441, 546, 2048, 2353 |
| Bme18I | GGWCC | 4 cut(s) | 285, 297, 1023, 2732 |
| BmeT110I | CYCGRG | 1 cut(s) | 2943 |
| BmgBI | CACGTC | 1 cut(s) | 2496 |
| BmgT120I | GGNCC | 4 cut(s) | 285, 297, 1023, 2732 |
| BmiI | GGNNCC | 2 cut(s) | 828, 1858 |
| BmrFI | CCNGG | 6 cut(s) | 295, 338, 441, 546, 2048, 2353 |
| BmrI | ACTGGG | 2 cut(s) | 1971, 3720 |
| BmsI | GCATC | 6 cut(s) | 412, 837, 1763, 2734, 2802, 2833 |
| BmtI | GCTAGC | 1 cut(s) | 2694 |
| BmuI | ACTGGG | 2 cut(s) | 1971, 3720 |
| BoxI | GACNNNNGTC | 2 cut(s) | 841, 1233 |
| BpiI | GAAGAC | 2 cut(s) | 693, 1968 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 262, 294, 887, 919, 2092, 2124 |
| BpmI | CTGGAG | 7 cut(s) | 990, 1737, 1992, 2658, 2673, 2734, 3503 |
| Bpu10I | CCTNAGC | 2 cut(s) | 34, 3428 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 55 |
| Bpu14I | TTCGAA | 1 cut(s) | 1534 |
| BpuEI | CTTGAG | 3 cut(s) | 889, 1587, 2394 |
| BpuMI | CCSGG | 3 cut(s) | 295, 441, 546 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1827 |
| BsaHI | GRCGYC | 1 cut(s) | 621 |
| BsaI | GGTCTC | 3 cut(s) | 825, 1710, 3322 |
| BsaJI | CCNNGG | 5 cut(s) | 227, 545, 1500, 1747, 2942 |
| BsaWI | WCCGGW | 4 cut(s) | 267, 708, 2500, 3509 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 122, 152, 197, 227, 2573, 2603 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 294, 1457, 1458, 1555, 1715, 2762, 3477 |
| Bse1I | ACTGG | 7 cut(s) | 963, 1227, 1543, 1966, 2026, 2751, 3715 |
| Bse21I | CCTNAGG | 3 cut(s) | 1239, 2736, 2828 |
| Bse3DI | GCAATG | 3 cut(s) | 530, 816, 2215 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1827 |
| BseAI | TCCGGA | 2 cut(s) | 267, 3509 |
| BseBI | CCWGG | 3 cut(s) | 338, 2048, 2353 |
| BseDI | CCNNGG | 5 cut(s) | 227, 545, 1500, 1747, 2942 |
| BseGI | GGATG | 9 cut(s) | 180, 403, 679, 871, 1299, 1828, 2774, 3445, 3696 |
| BseJI | GATNNNNATC | 1 cut(s) | 1827 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 294, 1457, 1458, 1555, 1715, 2762, 3477 |
| BseMI | GCAATG | 3 cut(s) | 530, 816, 2215 |
| BseNI | ACTGG | 7 cut(s) | 963, 1227, 1543, 1966, 2026, 2751, 3715 |
| BseRI | GAGGAG | 7 cut(s) | 127, 130, 240, 551, 2978, 2981, 3383 |
| BsgI | GTGCAG | 2 cut(s) | 440, 2486 |
| Bsh1236I | CGCG | 2 cut(s) | 645, 1275 |
| BshFI | GGCC | 4 cut(s) | 650, 1226, 3213, 3340 |
| BshNI | GGYRCC | 1 cut(s) | 1856 |
| BsiHKAI | GWGCWC | 3 cut(s) | 56, 1972, 3005 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2943 |
| BsiSI | CCGG | 7 cut(s) | 268, 295, 441, 545, 709, 2501, 3510 |
| BslFI | GGGAC | 2 cut(s) | 914, 1729 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 294, 1457, 1458, 1555, 1715, 2762, 3477 |
| BsmBI | CGTCTC | 2 cut(s) | 306, 2502 |
| BsmFI | GGGAC | 2 cut(s) | 914, 1729 |
| BsmI | GAATGC | 1 cut(s) | 2042 |
| BsnI | GGCC | 4 cut(s) | 650, 1226, 3213, 3340 |
| Bso31I | GGTCTC | 3 cut(s) | 825, 1710, 3322 |
| BsoBI | CYCGRG | 1 cut(s) | 2943 |
| Bsp119I | TTCGAA | 1 cut(s) | 1534 |
| Bsp1286I | GDGCHC | 4 cut(s) | 56, 1972, 3005, 3140 |
| Bsp13I | TCCGGA | 2 cut(s) | 267, 3509 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 55 |
| Bsp19I | CCATGG | 1 cut(s) | 1500 |
| BspACI | CCGC | 8 cut(s) | 10, 90, 617, 643, 1256, 1955, 2624, 3468 |
| BspANI | GGCC | 4 cut(s) | 650, 1226, 3213, 3340 |
| BspEI | TCCGGA | 2 cut(s) | 267, 3509 |
| BspFNI | CGCG | 2 cut(s) | 645, 1275 |
| BspLI | GGNNCC | 2 cut(s) | 828, 1858 |
| BspMAI | CTGCAG | 4 cut(s) | 1089, 2175, 2824, 3259 |
| BspMI | ACCTGC | 4 cut(s) | 1078, 2619, 2633, 2871 |
| BspOI | GCTAGC | 1 cut(s) | 2694 |
| BspPI | GGATC | 6 cut(s) | 24, 311, 1148, 2556, 2613, 3214 |
| BspQI | GCTCTTC | 2 cut(s) | 25, 2993 |
| BspT104I | TTCGAA | 1 cut(s) | 1534 |
| BspT107I | GGYRCC | 1 cut(s) | 1856 |
| BspTNI | GGTCTC | 3 cut(s) | 825, 1710, 3322 |
| BsrBI | CCGCTC | 1 cut(s) | 92 |
| BsrDI | GCAATG | 3 cut(s) | 530, 816, 2215 |
| BsrI | ACTGG | 7 cut(s) | 963, 1227, 1543, 1966, 2026, 2751, 3715 |
| BssECI | CCNNGG | 5 cut(s) | 227, 545, 1500, 1747, 2942 |
| BssNI | GRCGYC | 1 cut(s) | 621 |
| BssSI | CACGAG | 1 cut(s) | 1367 |
| BssT1I | CCWWGG | 3 cut(s) | 227, 1500, 1747 |
| Bst2BI | CACGAG | 1 cut(s) | 1367 |
| Bst2UI | CCWGG | 3 cut(s) | 338, 2048, 2353 |
| Bst4CI | ACNGT | 3 cut(s) | 1235, 2189, 2621 |
| Bst6I | CTCTTC | 5 cut(s) | 25, 738, 2544, 2993, 3591 |
| BstACI | GRCGYC | 1 cut(s) | 621 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 959, 1683, 2473 |
| BstBI | TTCGAA | 1 cut(s) | 1534 |
| BstDSI | CCRYGG | 1 cut(s) | 1500 |
| BstF5I | GGATG | 9 cut(s) | 180, 403, 679, 871, 1299, 1828, 2774, 3445, 3696 |
| BstFNI | CGCG | 2 cut(s) | 645, 1275 |
| BstH2I | RGCGCY | 2 cut(s) | 265, 455 |
| BstHHI | GCGC | 4 cut(s) | 264, 454, 1120, 3154 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 959, 980, 1195, 1683, 1955, 2162, 2473, 3528 |
| BstNI | CCWGG | 3 cut(s) | 338, 2048, 2353 |
| BstNSI | RCATGY | 6 cut(s) | 962, 1677, 2044, 2149, 2476, 2690 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 841, 1233 |
| BstSCI | CCNGG | 6 cut(s) | 293, 336, 439, 544, 2046, 2351 |
| BstSFI | CTRYAG | 4 cut(s) | 1085, 2171, 2820, 3255 |
| BstUI | CGCG | 2 cut(s) | 645, 1275 |
| BstV2I | GAAGAC | 2 cut(s) | 693, 1968 |
| BstX2I | RGATCY | 4 cut(s) | 1153, 1507, 2518, 3206 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2080 |
| BstYI | RGATCY | 4 cut(s) | 1153, 1507, 2518, 3206 |
| Bsu36I | CCTNAGG | 3 cut(s) | 1239, 2736, 2828 |
| BsuRI | GGCC | 4 cut(s) | 650, 1226, 3213, 3340 |
| BtgI | CCRYGG | 1 cut(s) | 1500 |
| BtrI | CACGTC | 1 cut(s) | 2496 |
| BtsCI | GGATG | 9 cut(s) | 180, 403, 679, 871, 1299, 1828, 2774, 3445, 3696 |
| BtsI | GCAGTG | 2 cut(s) | 1026, 2474 |
| BtsIMutI | CAGTG | 3 cut(s) | 495, 1026, 2474 |
| BveI | ACCTGC | 4 cut(s) | 1078, 2619, 2633, 2871 |
| CaiI | CAGNNNCTG | 1 cut(s) | 454 |
| CfoI | GCGC | 4 cut(s) | 264, 454, 1120, 3154 |
| Cfr13I | GGNCC | 4 cut(s) | 285, 297, 1023, 2732 |
| CpoI | CGGWCCG | 1 cut(s) | 297 |
| CseI | GACGC | 2 cut(s) | 1264, 2905 |
| CsiI | ACCWGGT | 1 cut(s) | 2046 |
| Csp6I | GTAC | 2 cut(s) | 3130, 3518 |
| CspI | CGGWCCG | 1 cut(s) | 297 |
| CviQI | GTAC | 2 cut(s) | 3130, 3518 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3404 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3404 |
| EaeI | YGGCCR | 2 cut(s) | 1224, 3211 |
| Eam1104I | CTCTTC | 5 cut(s) | 25, 738, 2544, 2993, 3591 |
| EarI | CTCTTC | 5 cut(s) | 25, 738, 2544, 2993, 3591 |
| EciI | GGCGGA | 1 cut(s) | 632 |
| Ecl136II | GAGCTC | 2 cut(s) | 54, 3003 |
| Eco130I | CCWWGG | 3 cut(s) | 227, 1500, 1747 |
| Eco147I | AGGCCT | 1 cut(s) | 650 |
| Eco24I | GRGCYC | 3 cut(s) | 56, 3005, 3140 |
| Eco31I | GGTCTC | 3 cut(s) | 825, 1710, 3322 |
| Eco47I | GGWCC | 4 cut(s) | 285, 297, 1023, 2732 |
| Eco53kI | GAGCTC | 2 cut(s) | 54, 3003 |
| Eco57I | CTGAAG | 5 cut(s) | 626, 1955, 2115, 3017, 3554 |
| Eco81I | CCTNAGG | 3 cut(s) | 1239, 2736, 2828 |
| Eco88I | CYCGRG | 1 cut(s) | 2943 |
| EcoICRI | GAGCTC | 2 cut(s) | 54, 3003 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2732 |
| EcoRI | GAATTC | 2 cut(s) | 1096, 1900 |
| EcoRII | CCWGG | 3 cut(s) | 336, 2046, 2351 |
| EcoT14I | CCWWGG | 3 cut(s) | 227, 1500, 1747 |
| EcoT22I | ATGCAT | 2 cut(s) | 2042, 2478 |
| EcoT38I | GRGCYC | 3 cut(s) | 56, 3005, 3140 |
| ErhI | CCWWGG | 3 cut(s) | 227, 1500, 1747 |
| Esp3I | CGTCTC | 2 cut(s) | 306, 2502 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1187, 1219, 2990, 3022 |
| FaqI | GGGAC | 2 cut(s) | 914, 1729 |
| FauI | CCCGC | 1 cut(s) | 97 |
| FauNDI | CATATG | 3 cut(s) | 2532, 3156, 3699 |
| FbaI | TGATCA | 2 cut(s) | 468, 1594 |
| FblI | GTMKAC | 1 cut(s) | 633 |
| FokI | GGATG | 9 cut(s) | 167, 390, 686, 878, 1286, 1835, 2781, 3452, 3703 |
| FriOI | GRGCYC | 3 cut(s) | 56, 3005, 3140 |
| FspI | TGCGCA | 1 cut(s) | 3153 |
| GlaI | GCGC | 4 cut(s) | 263, 453, 1119, 3153 |
| GsuI | CTGGAG | 7 cut(s) | 990, 1737, 1992, 2658, 2673, 2734, 3503 |
| HaeII | RGCGCY | 2 cut(s) | 265, 455 |
| HaeIII | GGCC | 4 cut(s) | 650, 1226, 3213, 3340 |
| HapII | CCGG | 7 cut(s) | 268, 295, 441, 545, 709, 2501, 3510 |
| HgaI | GACGC | 2 cut(s) | 1264, 2905 |
| HhaI | GCGC | 4 cut(s) | 264, 454, 1120, 3154 |
| Hin1I | GRCGYC | 1 cut(s) | 621 |
| Hin6I | GCGC | 4 cut(s) | 262, 452, 1118, 3152 |
| HinP1I | GCGC | 4 cut(s) | 262, 452, 1118, 3152 |
| HincII | GTYRAC | 1 cut(s) | 2383 |
| HindII | GTYRAC | 1 cut(s) | 2383 |
| HindIII | AAGCTT | 3 cut(s) | 1043, 3057, 3078 |
| HpaII | CCGG | 7 cut(s) | 268, 295, 441, 545, 709, 2501, 3510 |
| Hpy166II | GTNNAC | 6 cut(s) | 625, 634, 1844, 2383, 2706, 2895 |
| Hpy8I | GTNNAC | 6 cut(s) | 625, 634, 1844, 2383, 2706, 2895 |
| Hpy99I | CGWCG | 3 cut(s) | 44, 1232, 2715 |
| HpyCH4III | ACNGT | 3 cut(s) | 1235, 2189, 2621 |
| HpyCH4IV | ACGT | 3 cut(s) | 621, 2495, 3147 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 959, 980, 1195, 1683, 1955, 2162, 2473, 3528 |
| HpySE526I | ACGT | 3 cut(s) | 621, 2495, 3147 |
| Hsp92I | GRCGYC | 1 cut(s) | 621 |
| HspAI | GCGC | 4 cut(s) | 262, 452, 1118, 3152 |
| Kpn2I | TCCGGA | 2 cut(s) | 267, 3509 |
| Ksp22I | TGATCA | 2 cut(s) | 468, 1594 |
| LguI | GCTCTTC | 2 cut(s) | 25, 2993 |
| LmnI | GCTCC | 7 cut(s) | 579, 971, 1718, 2639, 2932, 2947, 3008 |
| LweI | GCATC | 6 cut(s) | 412, 837, 1763, 2734, 2802, 2833 |
| MabI | ACCWGGT | 1 cut(s) | 2046 |
| MaeII | ACGT | 3 cut(s) | 621, 2495, 3147 |
| MaeIII | GTNAC | 9 cut(s) | 1350, 1687, 1792, 2017, 2050, 2917, 3024, 3049, 3160 |
| MbiI | CCGCTC | 1 cut(s) | 92 |
| MfeI | CAATTG | 1 cut(s) | 2334 |
| MflI | RGATCY | 4 cut(s) | 1153, 1507, 2518, 3206 |
| MhlI | GDGCHC | 4 cut(s) | 56, 1972, 3005, 3140 |
| MlsI | TGGCCA | 1 cut(s) | 3213 |
| MluNI | TGGCCA | 1 cut(s) | 3213 |
| MlyI | GAGTC | 5 cut(s) | 488, 595, 639, 896, 3267 |
| MmeI | TCCRAC | 7 cut(s) | 153, 240, 408, 462, 873, 1191, 2571 |
| Mox20I | TGGCCA | 1 cut(s) | 3213 |
| Mph1103I | ATGCAT | 2 cut(s) | 2042, 2478 |
| MroI | TCCGGA | 2 cut(s) | 267, 3509 |
| MroXI | GAANNNNTTC | 4 cut(s) | 755, 2668, 3494, 3539 |
| MscI | TGGCCA | 1 cut(s) | 3213 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2078, 3702 |
| Msp20I | TGGCCA | 1 cut(s) | 3213 |
| MspA1I | CMGCKG | 3 cut(s) | 790, 2000, 3260 |
| MspI | CCGG | 7 cut(s) | 268, 295, 441, 545, 709, 2501, 3510 |
| MspR9I | CCNGG | 6 cut(s) | 295, 338, 441, 546, 2048, 2353 |
| MunI | CAATTG | 1 cut(s) | 2334 |
| Mva1269I | GAATGC | 1 cut(s) | 2042 |
| MvaI | CCWGG | 3 cut(s) | 338, 2048, 2353 |
| MvnI | CGCG | 2 cut(s) | 645, 1275 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 959, 980, 1195, 1683, 1955, 2162, 2473, 3528 |
| NciI | CCSGG | 3 cut(s) | 295, 441, 546 |
| NcoI | CCATGG | 1 cut(s) | 1500 |
| NdeI | CATATG | 3 cut(s) | 2532, 3156, 3699 |
| NheI | GCTAGC | 1 cut(s) | 2690 |
| NlaIV | GGNNCC | 2 cut(s) | 828, 1858 |
| NmuCI | GTSAC | 6 cut(s) | 1350, 1687, 2017, 2050, 2917, 3160 |
| NsbI | TGCGCA | 1 cut(s) | 3153 |
| NsiI | ATGCAT | 2 cut(s) | 2042, 2478 |
| NspI | RCATGY | 6 cut(s) | 962, 1677, 2044, 2149, 2476, 2690 |
| NspV | TTCGAA | 1 cut(s) | 1534 |
| OliI | CACNNNNGTG | 1 cut(s) | 2078 |
| PaeI | GCATGC | 5 cut(s) | 1677, 2044, 2149, 2476, 2690 |
| PaqCI | CACCTGC | 3 cut(s) | 2619, 2633, 2871 |
| PceI | AGGCCT | 1 cut(s) | 650 |
| PciSI | GCTCTTC | 2 cut(s) | 25, 2993 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 506, 642 |
| PctI | GAATGC | 1 cut(s) | 2042 |
| PdmI | GAANNNNTTC | 4 cut(s) | 755, 2668, 3494, 3539 |
| PflFI | GACNNNGTC | 2 cut(s) | 295, 1478 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1555, 2762 |
| PleI | GAGTC | 5 cut(s) | 487, 595, 638, 896, 3267 |
| PpsI | GAGTC | 5 cut(s) | 487, 595, 638, 896, 3267 |
| PpuMI | RGGWCCY | 1 cut(s) | 2732 |
| PshAI | GACNNNNGTC | 2 cut(s) | 841, 1233 |
| PsiI | TTATAA | 1 cut(s) | 1013 |
| Psp124BI | GAGCTC | 2 cut(s) | 56, 3005 |
| Psp5II | RGGWCCY | 1 cut(s) | 2732 |
| Psp6I | CCWGG | 3 cut(s) | 336, 2046, 2351 |
| PspGI | CCWGG | 3 cut(s) | 336, 2046, 2351 |
| PspN4I | GGNNCC | 2 cut(s) | 828, 1858 |
| PspPI | GGNCC | 4 cut(s) | 285, 297, 1023, 2732 |
| PspPPI | RGGWCCY | 1 cut(s) | 2732 |
| PstI | CTGCAG | 4 cut(s) | 1089, 2175, 2824, 3259 |
| PstNI | CAGNNNCTG | 1 cut(s) | 454 |
| PsuI | RGATCY | 4 cut(s) | 1153, 1507, 2518, 3206 |
| PsyI | GACNNNGTC | 2 cut(s) | 295, 1478 |
| PvuII | CAGCTG | 3 cut(s) | 790, 2000, 3260 |
| RsaI | GTAC | 2 cut(s) | 3131, 3519 |
| RsaNI | GTAC | 2 cut(s) | 3130, 3518 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2078, 3702 |
| Rsr2I | CGGWCCG | 1 cut(s) | 297 |
| RsrII | CGGWCCG | 1 cut(s) | 297 |
| SacI | GAGCTC | 2 cut(s) | 56, 3005 |
| SapI | GCTCTTC | 2 cut(s) | 25, 2993 |
| Sau96I | GGNCC | 4 cut(s) | 285, 297, 1023, 2732 |
| SchI | GAGTC | 5 cut(s) | 488, 595, 639, 896, 3267 |
| ScrFI | CCNGG | 6 cut(s) | 295, 338, 441, 546, 2048, 2353 |
| SduI | GDGCHC | 4 cut(s) | 56, 1972, 3005, 3140 |
| SexAI | ACCWGGT | 1 cut(s) | 2046 |
| SfaNI | GCATC | 6 cut(s) | 412, 837, 1763, 2734, 2802, 2833 |
| SfcI | CTRYAG | 4 cut(s) | 1085, 2171, 2820, 3255 |
| SfuI | TTCGAA | 1 cut(s) | 1534 |
| SinI | GGWCC | 4 cut(s) | 285, 297, 1023, 2732 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2078, 3702 |
| SmlI | CTYRAG | 3 cut(s) | 904, 1602, 2409 |
| SmoI | CTYRAG | 3 cut(s) | 904, 1602, 2409 |
| SphI | GCATGC | 5 cut(s) | 1677, 2044, 2149, 2476, 2690 |
| SseBI | AGGCCT | 1 cut(s) | 650 |
| SsiI | CCGC | 8 cut(s) | 10, 90, 617, 643, 1256, 1955, 2624, 3468 |
| SspI | AATATT | 1 cut(s) | 2668 |
| SstI | GAGCTC | 2 cut(s) | 56, 3005 |
| StuI | AGGCCT | 1 cut(s) | 650 |
| StyD4I | CCNGG | 6 cut(s) | 293, 336, 439, 544, 2046, 2351 |
| StyI | CCWWGG | 3 cut(s) | 227, 1500, 1747 |
| TaaI | ACNGT | 3 cut(s) | 1235, 2189, 2621 |
| TaiI | ACGT | 3 cut(s) | 624, 2498, 3150 |
| TaqI | TCGA | 8 cut(s) | 592, 669, 845, 1534, 1652, 1831, 2281, 3119 |
| TaqII | GACCGA | 1 cut(s) | 807 |
| TatI | WGTACW | 1 cut(s) | 3129 |
| TauI | GCSGC | 3 cut(s) | 13, 1958, 3470 |
| TscAI | CASTG | 3 cut(s) | 495, 1033, 2474 |
| TseFI | GTSAC | 6 cut(s) | 1350, 1687, 2017, 2050, 2917, 3160 |
| Tsp45I | GTSAC | 6 cut(s) | 1350, 1687, 2017, 2050, 2917, 3160 |
| TspDTI | ATGAA | 7 cut(s) | 1181, 1271, 1839, 2049, 2226, 3236, 3720 |
| TspGWI | ACGGA | 1 cut(s) | 819 |
| TspRI | CASTG | 3 cut(s) | 495, 1033, 2474 |
| Tth111I | GACNNNGTC | 2 cut(s) | 295, 1478 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1555, 2762 |
| VpaK11BI | GGWCC | 4 cut(s) | 285, 297, 1023, 2732 |
| XapI | RAATTY | 8 cut(s) | 44, 1096, 1431, 1537, 1900, 2201, 2271, 3493 |
| XbaI | TCTAGA | 2 cut(s) | 202, 2416 |
| XceI | RCATGY | 6 cut(s) | 962, 1677, 2044, 2149, 2476, 2690 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2201, 3478 |
| XmaJI | CCTAGG | 1 cut(s) | 227 |
| XmiI | GTMKAC | 1 cut(s) | 633 |
| XmnI | GAANNNNTTC | 4 cut(s) | 755, 2668, 3494, 3539 |
| ZraI | GACGTC | 1 cut(s) | 622 |
| Zsp2I | ATGCAT | 2 cut(s) | 2042, 2478 |