RLG00000019748

Condensin II non structural maintenance of chromosomes subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0006247
Physical Location & Seq
Forward (+)
56280673 .. 56285792
5120 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019748

Sequence Viewer

Length: 3756 bp
ATGGAGAAGCGGCTCCGCTCCTCTCTCCAATCCTCCGCCGAAGAGTTTCTGACCTCCGCCACCAAGCTCAGCCTCAAATCCTTAAAGCCCTCTGTCAAAACCCTAATCCACAAAATCAAACCCTCCTCCGACCTCTCCTCCTCTCTCCCCATCTCTCTCTCCCACTCCATTTCCGACGCCATCCTCTCCTTCCAGACCCTTCTTCTTCAACCCAACCCCAACCCTAGATCCCCTCGCTCTCCCCCCACCAAGCGCCCCCGCAGGTCCAGCCGGAGCTCCAAGACCCGACCCGACCGCGAACCCGAACCAGACCTCCATCCGGACCCGAATCCTGAAGAGGAGAAGCATCAACTGCTCTCGAAGCTTCAGATTCTCGCCTGTATCGCCCAACTATGCGCCGGGCATCCGGGGAAGGCGTTCCCGCCGTTGGATTTGTTGCCGGGAGTTCAAGCGCTTCACGACAGTCTGATAATTCTGGAGTCGGACTCGGCGCTGGTATCGGCGATTGCGAGCTTGTGCGAGCAGTGGTGGAAGGAGGAGTTGCCTGGCCGAGAATCGCTGATCTCTCAGTCGCTCCCTTTCTTGCTCTCGAGATCTCTCACTCTGAACAAGAAGGCAGACGTCCACAGAGTCTACGCCCTCCGCGAGGCTTTCACCTGCTTCGATTTCGAGGACGAGAGCATTGAGGACTTGAAGCTGTTGCTAATCCGGTGCGTGATTTCACCGCTGTTTCTGAAAACAGAGGAGGGGAGGAAGTTTCTGGCGTTTCTGTTTGGGCTGAGTTCGCAGCTGTTGAAGGAGGTTTTGGCTGTGATCAAGTCTCAGATTCCATTTGGAAGGAAGTCGATGCTGGAGGCCTACGGCGACGTTTTGTTCCGGGCTTGGAAAGTGGCAGAGGGGGAGCTGAGGAGTGAGATTGAGAACGGGTTCTTGCAGGTTTTGATTGAGGGTGCTATACACGCCAGCTCTGGAGCATTTGCTGCATCTATTAGAAGGGTTTTGGGAGGGTTTATAAACCAGAGGACCACTGCTGGAGTTGAGAAGCTTCTTTTCCAGCTCTCGGAGCCTGTCATATTTCGCTCTTTGCAGGTTGCGAATTCTAATGTTCGTCAAAATGCGCTGCATTTACTTTTGGACTTGTTCCCTCTTGAAGATCCTGATTCGACTAAAGAGGTTAAAGATTCATTGCTTGATAAGCAGTTCTTTTTATTGCGGAAATTACTTGTAGATGATTGTCCAGAGGTGAGAGTGGTTGCAGTGGAAGGTTCTTGTCGTATTCTTCATCTGTTTTGGGAAGTAATCCCTTCGCCTACCATCACAAAGTTAGTTACTAGAATTTTTGATGATATGTCACATGATACAAGTCATGAGGTTAGGCTTTCCACACTGAATGGCACCATGTATTTGTTTGGCAATCCTCTATGTCATCAATTTCTCAATGTGCTTCTACCCAGATTGGGGCATTTGATGATGGACAATGTCCTATCAATAAGAGTTGCCATGGTAGATCTCCTCCTTCTCATAAGGGATATTCAAAATTTCCAGTTCCATAAGGTAGTGAAGTTAGATGTACTATTATCTACCCTTGAAAATGATCAACCTCAAGTTGCTCAGAAAATTACAAGGTTGCTTATGCCATCATACTTTCCCTCAAAAGAAACTGTTGAAACAGCATGCAATCGTTGTACTACACTTGTAAAAAGGTCTCCGATGGCTGGAGCAAGGTTTTGTGAATTTGCTGCGTCCCAAGGGGCATCTCTTAAGTCTCTGATGGAACTTGTTAGGGTAATGATTACTTTGGTCCTTCCACCTAATAATCTGGATGAACAACAAGTTGAGGGTTTACTTACTTCTTCTTCCAACCTTTGCAATACCCTAGCTGGTGATCCAGTTTTCAAGAAGGAGCTTAAAGAGTTTTTTGATGGTGAAAAGTTGAAGTACTTGATTGCTGCCGCACCTACCGGGCCTGCTCAGTCTTGTGTATTCAACATTGTTTCAACTGTCTCTCCTGATGATGTGGCTGGACTTCTTGATGAATGTATGCATCTGGTGACTAATTGTAGTGGTTTATCCAAAAATGTGGAGAAGCAATCTGAAGTGAGGTCTGCTCACAATTTGTTGCTGTCTTGTGATGCGATTGATGGTATGCTGGAAGCTCTAACAGCACTTCTGCAGAAATCAGCCTATCGTTGCCATATTAAATATGGCAGTGAAATTAAGAACTTAAGTGTTTTCTCTGCGAAAAGAAAGAAATCAAAGTCCTCTGGCAAAATTTCAGCTCAACAGAAACATGTTAGTGGAAAAAAAGTCACCAGTTTTGAGGACGATTATTCAGTCGCGGCAGGAATAGCCTGGCAAATCAGGGACTTGCTTGTATCTGTCAATACTCGGAAGGCTATATTGGGATCTCAAACTCTAGAATCTTTACTAATATGTCTAAAGGTCATTTCTGAGGTCACCATTGTGCAGTGCATGGATTATGAATATGTGGACACATTTCCTGTTTCAGCATATACAGCTCTTGCGCTGCATTTGTCGCTTCAAAATGTCTCTTCCAATAAGAATGATAGGATGGATTCATCAGGGTCTACTTTGGAGCAGACCGAGTTGGAACAGGCATTGGATCATGTGCTTAATTGTACAGAGAAGCTATGTGGAATAGGCGATTCTGGACAGTCTAGCAGAGTTTATTCAGAATCTAAGCATGCTAGTGATAAGTCTGCGAGTCGGCGTGAAAAAAGGCACAGAGAACCTCAAACACATGCCTCCATTGCAAGTGATAGTGGAAATGTATATACTGAACCAAAGAAGTTGGCGAACAAGGTGAAGATGCTTACTGCAGTCCAAAGGTTCATGGTTGATGCTGCTACAATAGGTTTTGCTCCTCAAACTCTGGAAAGGTGCTTAAGATCCACATCAGGTTATATACGATGTGTCATATCTACTTTGGAGCAACAACCTCGTGAGCAAATTGATTTTGAGGAGGAAGATTTGAAGGATGTAGTTCTCTGTTTGAAAAGCTCCTCCACCTATGCAGCGAAGTTACTTAATCTAGCTCTTAAAGATGCTACTGAAGCTTCACCACCTCCAGCAGAAGCTTCTGATCTTGCCAACGATATGCTTGATTTAATTATCTCGATTGAATTATACTTGGGCTCAACCTATGCTGGACATGTGGTGGCAGCAGTGAAGCCTTGGGTTCCTGACTTGATTTTGGCATTAGGATCTGGGCACATTATGAAACAGATTATGGGAGAAGAGTCGCAAACGAGTCCAGCTGATCGCATCAGAGTCCACTTTCCATCATGGCTCTTAATTTTAGCCAAGACTGAGCTCTCTGAAGCTAGTGAAGTCCGGCCAGAAGATGATGGAGACTCTGAACCTGAGGAGTTTCCTGCTTTCAAAAAACTTCTTACAATGATTGTCAAATTGTTAAAAGAAAATCTCAGCATGCAGGGTGTGTTTGGGGCGATCTTCATGATCGGCGCTATAGTAGGGCTGGAAAAGAAAAATTTTGGGCTGGTTTTCGGACTTCTACGCTTTGTATGCCTGAAGATATTCAAGCATGATGATAGGGCATGGGGTGATTTGATGTTGGCATTTCTGCAAGATATCTACCCTCGGATCGAGAGAGAAATTGAGGAAGAGTGTGATGAAGATGGAAGGGAAAAACTGGAAAAAGCCGAGGACTTGCTGGAACCTATTTGGTTGTATCATCTGCATGAAACTGGGAGGGTCTCTATGATGGAGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Condensin2nSMC

Protein Analysis

1252

Amino Acids

139.31

Weight (kDa)

5.96

Isoelectric Point (pI)

51.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Condensin2nSMC PF12422 237 - 385 1.2e-56 Condensin II non structural maintenance of chromosomes subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1013
AarI CACCTGC 1 cut(s) 665
AatII GACGTC 1 cut(s) 624
Acc36I ACCTGC 4 cut(s) 252, 665, 925, 1078
AccB1I GGYRCC 1 cut(s) 1394
AccBSI CCGCTC 1 cut(s) 18
AccI GTMKAC 2 cut(s) 633, 2588
AccII CGCG 3 cut(s) 297, 645, 2339
AccIII TCCGGA 1 cut(s) 319
AclWI GGATC 8 cut(s) 222, 1148, 1880, 2413, 2631, 2904, 3232, 3632
AcoI YGGCCR 2 cut(s) 547, 3356
AcsI RAATTY 6 cut(s) 1096, 1335, 1537, 1733, 2271, 3511
AcuI CTGAAG 6 cut(s) 350, 354, 2115, 3093, 3360, 3572
AcyI GRCGYC 2 cut(s) 177, 621
AfaI GTAC 4 cut(s) 1572, 1687, 1940, 2641
AfeI AGCGCT 1 cut(s) 453
AfiI CCNNNNNNNGG 7 cut(s) 319, 427, 646, 1060, 1457, 1458, 1715
AflII CTTAAG 3 cut(s) 1760, 2224, 2905
AflIII ACRYGT 2 cut(s) 2290, 3172
AjnI CCWGG 2 cut(s) 544, 2351
AjuI GAANNNNNNNTTGG 4 cut(s) 788, 820, 2384, 2416
AleI CACNNNNGTG 1 cut(s) 2462
AloI GAACNNNNNNTCC 2 cut(s) 297, 329
Alw21I GWGCWC 2 cut(s) 278, 3336
Alw26I GTCTC 7 cut(s) 825, 1710, 1770, 2008, 2554, 3366, 3742
AlwI GGATC 8 cut(s) 222, 1148, 1880, 2413, 2631, 2904, 3232, 3632
Ama87I CYCGRG 1 cut(s) 589
Aor13HI TCCGGA 1 cut(s) 319
Aor51HI AGCGCT 1 cut(s) 453
AoxI GGCC 4 cut(s) 547, 855, 1964, 3356
ApeKI GCWGC 9 cut(s) 787, 980, 1120, 1739, 1949, 2527, 2864, 3035, 3182
ApoI RAATTY 6 cut(s) 1096, 1335, 1537, 1733, 2271, 3511
Asp700I GAANNNNTTC 4 cut(s) 45, 416, 926, 3557
AspLEI GCGC 7 cut(s) 255, 398, 454, 493, 1120, 2527, 3488
AspS9I GGNCC 5 cut(s) 264, 322, 1023, 1801, 1964
AsuC2I CCSGG 5 cut(s) 400, 408, 441, 878, 1963
AvaI CYCGRG 1 cut(s) 589
AvaII GGWCC 4 cut(s) 264, 322, 1023, 1801
AxyI CCTNAGG 1 cut(s) 3384
BaeGI GKGCMC 1 cut(s) 3234
BanI GGYRCC 1 cut(s) 1394
BanII GRGCYC 3 cut(s) 278, 3158, 3336
BauI CACGAG 1 cut(s) 2961
Bbv12I GWGCWC 2 cut(s) 278, 3336
BbvCI CCTCAGC 1 cut(s) 905
BbvI GCAGC 9 cut(s) 799, 967, 1107, 1726, 1936, 2514, 2851, 3047, 3194
BceAI ACGGC 2 cut(s) 409, 877
BcgI CGANNNNNNTGC 2 cut(s) 2942, 2976
BciT130I CCWGG 2 cut(s) 546, 2353
BclI TGATCA 2 cut(s) 813, 1594
BcnI CCSGG 5 cut(s) 400, 408, 441, 878, 1963
BcoDI GTCTC 7 cut(s) 825, 1710, 1770, 2008, 2554, 3366, 3742
BfaI CTAG 8 cut(s) 225, 1332, 1877, 2417, 2679, 2709, 3053, 3345
BfmI CTRYAG 3 cut(s) 2171, 2838, 3489
BfoI RGCGCY 4 cut(s) 256, 455, 494, 3489
BfrI CTTAAG 3 cut(s) 1760, 2224, 2905
BfuAI ACCTGC 4 cut(s) 252, 665, 925, 1078
BglII AGATCT 2 cut(s) 593, 1507
BlpI GCTNAGC 1 cut(s) 68
BmcAI AGTACT 1 cut(s) 1940
Bme1390I CCNGG 7 cut(s) 400, 408, 441, 546, 878, 1963, 2353
Bme18I GGWCC 4 cut(s) 264, 322, 1023, 1801
BmeT110I CYCGRG 1 cut(s) 589
BmgT120I GGNCC 5 cut(s) 264, 322, 1023, 1801, 1964
BmiI GGNNCC 6 cut(s) 14, 324, 1065, 1396, 3201, 3699
BmrFI CCNGG 7 cut(s) 400, 408, 441, 546, 878, 1963, 2353
BmrI ACTGGG 1 cut(s) 3738
BmuI ACTGGG 1 cut(s) 3738
BplI GAGNNNNNCTC 4 cut(s) 470, 502, 2092, 2124
BpmI CTGGAG 6 cut(s) 497, 872, 990, 1053, 1737, 3072
Bpu10I CCTNAGC 1 cut(s) 905
Bpu1102I GCTNAGC 1 cut(s) 68
BpuEI CTTGAG 1 cut(s) 1587
BpuMI CCSGG 5 cut(s) 400, 408, 441, 878, 1963
BsaBI GATNNNNATC 1 cut(s) 2914
BsaHI GRCGYC 2 cut(s) 177, 621
BsaI GGTCTC 2 cut(s) 1710, 3742
BsaJI CCNNGG 6 cut(s) 407, 1500, 1747, 3194, 3620, 3684
BsaWI WCCGGW 2 cut(s) 319, 708
BsaXI ACNNNNNCTCC 6 cut(s) 122, 152, 297, 327, 1990, 2020
Bsc4I CCNNNNNNNGG 7 cut(s) 319, 427, 646, 1060, 1457, 1458, 1715
Bse1I ACTGG 5 cut(s) 1543, 1889, 2313, 3678, 3733
Bse21I CCTNAGG 1 cut(s) 3384
Bse3DI GCAATG 2 cut(s) 1184, 2769
Bse8I GATNNNNATC 1 cut(s) 2914
BseAI TCCGGA 1 cut(s) 319
BseBI CCWGG 2 cut(s) 546, 2353
BseDI CCNNGG 6 cut(s) 407, 1500, 1747, 3194, 3620, 3684
BseGI GGATG 6 cut(s) 180, 316, 403, 1828, 2577, 3004
BseJI GATNNNNATC 1 cut(s) 2914
BseLI CCNNNNNNNGG 7 cut(s) 319, 427, 646, 1060, 1457, 1458, 1715
BseMI GCAATG 2 cut(s) 1184, 2769
BseNI ACTGG 5 cut(s) 1543, 1889, 2313, 3678, 3733
BseSI GKGCMC 1 cut(s) 3234
BseXI GCAGC 9 cut(s) 799, 967, 1107, 1726, 1936, 2514, 2851, 3047, 3194
BsgI GTGCAG 1 cut(s) 2486
Bsh1236I CGCG 3 cut(s) 297, 645, 2339
Bsh1285I CGRYCG 1 cut(s) 295
BshFI GGCC 4 cut(s) 549, 857, 1966, 3358
BshNI GGYRCC 1 cut(s) 1394
BsiEI CGRYCG 1 cut(s) 295
BsiHKAI GWGCWC 2 cut(s) 278, 3336
BsiHKCI CYCGRG 1 cut(s) 589
BsiSI CCGG 9 cut(s) 271, 320, 399, 407, 440, 709, 877, 1962, 3355
BslFI GGGAC 2 cut(s) 1729, 2378
BslI CCNNNNNNNGG 7 cut(s) 319, 427, 646, 1060, 1457, 1458, 1715
BsmAI GTCTC 7 cut(s) 825, 1710, 1770, 2008, 2554, 3366, 3742
BsmFI GGGAC 2 cut(s) 1729, 2378
BsnI GGCC 4 cut(s) 549, 857, 1966, 3358
Bso31I GGTCTC 2 cut(s) 1710, 3742
BsoBI CYCGRG 1 cut(s) 589
Bsp1286I GDGCHC 4 cut(s) 278, 3158, 3234, 3336
Bsp13I TCCGGA 1 cut(s) 319
Bsp1407I TGTACA 1 cut(s) 2639
Bsp1720I GCTNAGC 1 cut(s) 68
Bsp19I CCATGG 1 cut(s) 1500
BspANI GGCC 4 cut(s) 549, 857, 1966, 3358
BspEI TCCGGA 1 cut(s) 319
BspFNI CGCG 3 cut(s) 297, 645, 2339
BspHI TCATGA 2 cut(s) 1366, 3477
BspLI GGNNCC 6 cut(s) 14, 324, 1065, 1396, 3201, 3699
BspMAI CTGCAG 2 cut(s) 2175, 2842
BspMI ACCTGC 4 cut(s) 252, 665, 925, 1078
BspPI GGATC 8 cut(s) 222, 1148, 1880, 2413, 2631, 2904, 3232, 3632
BspT107I GGYRCC 1 cut(s) 1394
BspTI CTTAAG 3 cut(s) 1760, 2224, 2905
BspTNI GGTCTC 2 cut(s) 1710, 3742
BsrBI CCGCTC 1 cut(s) 18
BsrDI GCAATG 2 cut(s) 1184, 2769
BsrGI TGTACA 1 cut(s) 2639
BsrI ACTGG 5 cut(s) 1543, 1889, 2313, 3678, 3733
BssECI CCNNGG 6 cut(s) 407, 1500, 1747, 3194, 3620, 3684
BssNI GRCGYC 2 cut(s) 177, 621
BssSI CACGAG 1 cut(s) 2961
BssT1I CCWWGG 3 cut(s) 1500, 1747, 3194
Bst2BI CACGAG 1 cut(s) 2961
Bst2UI CCWGG 2 cut(s) 546, 2353
Bst4CI ACNGT 4 cut(s) 464, 1663, 2002, 2676
Bst6I CTCTTC 5 cut(s) 36, 330, 2557, 3252, 3639
BstACI GRCGYC 2 cut(s) 177, 621
BstAFI CTTAAG 3 cut(s) 1760, 2224, 2905
BstAPI GCANNNNNTGC 2 cut(s) 352, 980
BstAUI TGTACA 1 cut(s) 2639
BstC8I GCNNGC 7 cut(s) 511, 521, 964, 1675, 1968, 2706, 3452
BstDSI CCRYGG 1 cut(s) 1500
BstEII GGTNACC 1 cut(s) 2455
BstENI CCTNNNNNAGG 1 cut(s) 644
BstF5I GGATG 6 cut(s) 180, 316, 403, 1828, 2577, 3004
BstFNI CGCG 3 cut(s) 297, 645, 2339
BstH2I RGCGCY 4 cut(s) 256, 455, 494, 3489
BstHHI GCGC 7 cut(s) 255, 398, 454, 493, 1120, 2527, 3488
BstMAI GTCTC 7 cut(s) 825, 1710, 1770, 2008, 2554, 3366, 3742
BstMCI CGRYCG 1 cut(s) 295
BstNI CCWGG 2 cut(s) 546, 2353
BstNSI RCATGY 6 cut(s) 1677, 2294, 2708, 2765, 3176, 3454
BstPI GGTNACC 1 cut(s) 2455
BstSCI CCNGG 7 cut(s) 398, 406, 439, 544, 876, 1961, 2351
BstSFI CTRYAG 3 cut(s) 2171, 2838, 3489
BstSLI GKGCMC 1 cut(s) 3234
BstUI CGCG 3 cut(s) 297, 645, 2339
BstV1I GCAGC 9 cut(s) 799, 967, 1107, 1726, 1936, 2514, 2851, 3047, 3194
BstX2I RGATCY 7 cut(s) 227, 593, 1153, 1507, 2405, 2909, 3224
BstXI CCANNNNNNTGG 1 cut(s) 2080
BstYI RGATCY 7 cut(s) 227, 593, 1153, 1507, 2405, 2909, 3224
Bsu36I CCTNAGG 1 cut(s) 3384
BsuRI GGCC 4 cut(s) 549, 857, 1966, 3358
BtgI CCRYGG 1 cut(s) 1500
BtsCI GGATG 6 cut(s) 180, 316, 403, 1828, 2577, 3004
BtsI GCAGTG 6 cut(s) 530, 1026, 1263, 2215, 2474, 3192
BtsIMutI CAGTG 7 cut(s) 530, 1026, 1263, 1385, 2215, 2474, 3192
BveI ACCTGC 4 cut(s) 252, 665, 925, 1078
Cac8I GCNNGC 7 cut(s) 511, 521, 964, 1675, 1968, 2706, 3452
CciI TCATGA 2 cut(s) 1366, 3477
CfoI GCGC 7 cut(s) 255, 398, 454, 493, 1120, 2527, 3488
Cfr13I GGNCC 5 cut(s) 264, 322, 1023, 1801, 1964
CseI GACGC 2 cut(s) 185, 1731
Csp6I GTAC 4 cut(s) 1571, 1686, 1939, 2640
CviQI GTAC 4 cut(s) 1571, 1686, 1939, 2640
EaeI YGGCCR 2 cut(s) 547, 3356
Eam1104I CTCTTC 5 cut(s) 36, 330, 2557, 3252, 3639
EarI CTCTTC 5 cut(s) 36, 330, 2557, 3252, 3639
EciI GGCGGA 2 cut(s) 25, 46
Ecl136II GAGCTC 2 cut(s) 276, 3334
Eco130I CCWWGG 3 cut(s) 1500, 1747, 3194
Eco147I AGGCCT 1 cut(s) 857
Eco24I GRGCYC 3 cut(s) 278, 3158, 3336
Eco31I GGTCTC 2 cut(s) 1710, 3742
Eco32I GATATC 1 cut(s) 3613
Eco47I GGWCC 4 cut(s) 264, 322, 1023, 1801
Eco47III AGCGCT 1 cut(s) 453
Eco53kI GAGCTC 2 cut(s) 276, 3334
Eco57I CTGAAG 6 cut(s) 350, 354, 2115, 3093, 3360, 3572
Eco81I CCTNAGG 1 cut(s) 3384
Eco88I CYCGRG 1 cut(s) 589
Eco91I GGTNACC 1 cut(s) 2455
EcoICRI GAGCTC 2 cut(s) 276, 3334
EcoNI CCTNNNNNAGG 1 cut(s) 644
EcoO65I GGTNACC 1 cut(s) 2455
EcoRI GAATTC 1 cut(s) 1096
EcoRII CCWGG 2 cut(s) 544, 2351
EcoRV GATATC 1 cut(s) 3613
EcoT14I CCWWGG 3 cut(s) 1500, 1747, 3194
EcoT22I ATGCAT 1 cut(s) 2046
EcoT38I GRGCYC 3 cut(s) 278, 3158, 3336
ErhI CCWWGG 3 cut(s) 1500, 1747, 3194
FalI AAGNNNNNCTT 2 cut(s) 1187, 1219
FaqI GGGAC 2 cut(s) 1729, 2378
FauI CCCGC 2 cut(s) 266, 429
FbaI TGATCA 2 cut(s) 813, 1594
FblI GTMKAC 2 cut(s) 633, 2588
FokI GGATG 6 cut(s) 167, 303, 390, 1835, 2584, 3011
FriOI GRGCYC 3 cut(s) 278, 3158, 3336
FspBI CTAG 8 cut(s) 225, 1332, 1877, 2417, 2679, 2709, 3053, 3345
GlaI GCGC 7 cut(s) 254, 397, 453, 492, 1119, 2526, 3487
GsuI CTGGAG 6 cut(s) 497, 872, 990, 1053, 1737, 3072
HaeII RGCGCY 4 cut(s) 256, 455, 494, 3489
HaeIII GGCC 4 cut(s) 549, 857, 1966, 3358
HapII CCGG 9 cut(s) 271, 320, 399, 407, 440, 709, 877, 1962, 3355
HgaI GACGC 2 cut(s) 185, 1731
HhaI GCGC 7 cut(s) 255, 398, 454, 493, 1120, 2527, 3488
Hin1I GRCGYC 2 cut(s) 177, 621
Hin6I GCGC 7 cut(s) 253, 396, 452, 491, 1118, 2525, 3486
HinP1I GCGC 7 cut(s) 253, 396, 452, 491, 1118, 2525, 3486
HindIII AAGCTT 4 cut(s) 362, 1043, 3075, 3096
HpaII CCGG 9 cut(s) 271, 320, 399, 407, 440, 709, 877, 1962, 3355
Hpy166II GTNNAC 6 cut(s) 625, 634, 1844, 2491, 2589, 3295
Hpy8I GTNNAC 6 cut(s) 625, 634, 1844, 2491, 2589, 3295
Hpy99I CGWCG 2 cut(s) 179, 869
HpyCH4III ACNGT 4 cut(s) 464, 1663, 2002, 2676
HpyCH4IV ACGT 2 cut(s) 621, 867
HpySE526I ACGT 2 cut(s) 621, 867
Hsp92I GRCGYC 2 cut(s) 177, 621
HspAI GCGC 7 cut(s) 253, 396, 452, 491, 1118, 2525, 3486
Kpn2I TCCGGA 1 cut(s) 319
Ksp22I TGATCA 2 cut(s) 813, 1594
Lsp1109I GCAGC 9 cut(s) 799, 967, 1107, 1726, 1936, 2514, 2851, 3047, 3194
MaeI CTAG 8 cut(s) 225, 1332, 1877, 2417, 2679, 2709, 3053, 3345
MaeII ACGT 2 cut(s) 621, 867
MaeIII GTNAC 6 cut(s) 1327, 1350, 2050, 2308, 2455, 3042
MbiI CCGCTC 1 cut(s) 18
MflI RGATCY 7 cut(s) 227, 593, 1153, 1507, 2405, 2909, 3224
MhlI GDGCHC 4 cut(s) 278, 3158, 3234, 3336
MlyI GAGTC 8 cut(s) 479, 488, 639, 2734, 3269, 3280, 3300, 3368
MmeI TCCRAC 6 cut(s) 153, 198, 408, 462, 1884, 2589
Mph1103I ATGCAT 1 cut(s) 2046
MroI TCCGGA 1 cut(s) 319
MroXI GAANNNNTTC 4 cut(s) 45, 416, 926, 3557
MslI CAYNNNNRTG 4 cut(s) 2295, 2462, 2709, 3720
MspA1I CMGCKG 3 cut(s) 727, 790, 3278
MspCI CTTAAG 3 cut(s) 1760, 2224, 2905
MspI CCGG 9 cut(s) 271, 320, 399, 407, 440, 709, 877, 1962, 3355
MspR9I CCNGG 7 cut(s) 400, 408, 441, 546, 878, 1963, 2353
MvaI CCWGG 2 cut(s) 546, 2353
MvnI CGCG 3 cut(s) 297, 645, 2339
NciI CCSGG 5 cut(s) 400, 408, 441, 878, 1963
NcoI CCATGG 1 cut(s) 1500
NlaIV GGNNCC 6 cut(s) 14, 324, 1065, 1396, 3201, 3699
NmeAIII GCCGAG 3 cut(s) 467, 575, 3709
NmuCI GTSAC 4 cut(s) 1350, 2050, 2308, 2455
NsiI ATGCAT 1 cut(s) 2046
NspI RCATGY 6 cut(s) 1677, 2294, 2708, 2765, 3176, 3454
OliI CACNNNNGTG 1 cut(s) 2462
PaeI GCATGC 3 cut(s) 1677, 2708, 3454
PaeR7I CTCGAG 1 cut(s) 589
PagI TCATGA 2 cut(s) 1366, 3477
PaqCI CACCTGC 1 cut(s) 665
PceI AGGCCT 1 cut(s) 857
PciI ACATGT 2 cut(s) 2290, 3172
PcsI WCGNNNNNNNCGW 2 cut(s) 506, 642
PdmI GAANNNNTTC 4 cut(s) 45, 416, 926, 3557
PflFI GACNNNGTC 1 cut(s) 1478
PleI GAGTC 8 cut(s) 479, 487, 638, 2733, 3268, 3279, 3299, 3368
PpsI GAGTC 8 cut(s) 479, 487, 638, 2733, 3268, 3279, 3299, 3368
PscI ACATGT 2 cut(s) 2290, 3172
PsiI TTATAA 1 cut(s) 1013
Psp124BI GAGCTC 2 cut(s) 278, 3336
Psp6I CCWGG 2 cut(s) 544, 2351
PspEI GGTNACC 1 cut(s) 2455
PspGI CCWGG 2 cut(s) 544, 2351
PspN4I GGNNCC 6 cut(s) 14, 324, 1065, 1396, 3201, 3699
PspPI GGNCC 5 cut(s) 264, 322, 1023, 1801, 1964
PstI CTGCAG 2 cut(s) 2175, 2842
PsuI RGATCY 7 cut(s) 227, 593, 1153, 1507, 2405, 2909, 3224
PsyI GACNNNGTC 1 cut(s) 1478
PvuII CAGCTG 2 cut(s) 790, 3278
RsaI GTAC 4 cut(s) 1572, 1687, 1940, 2641
RsaNI GTAC 4 cut(s) 1571, 1686, 1939, 2640
RseI CAYNNNNRTG 4 cut(s) 2295, 2462, 2709, 3720
SacI GAGCTC 2 cut(s) 278, 3336
Sau96I GGNCC 5 cut(s) 264, 322, 1023, 1801, 1964
ScaI AGTACT 1 cut(s) 1940
SchI GAGTC 8 cut(s) 479, 488, 639, 2734, 3269, 3280, 3300, 3368
ScrFI CCNGG 7 cut(s) 400, 408, 441, 546, 878, 1963, 2353
SduI GDGCHC 4 cut(s) 278, 3158, 3234, 3336
SfcI CTRYAG 3 cut(s) 2171, 2838, 3489
Sfr274I CTCGAG 1 cut(s) 589
SinI GGWCC 4 cut(s) 264, 322, 1023, 1801
SlaI CTCGAG 1 cut(s) 589
SmiMI CAYNNNNRTG 4 cut(s) 2295, 2462, 2709, 3720
SmlI CTYRAG 5 cut(s) 589, 1602, 1760, 2224, 2905
SmoI CTYRAG 5 cut(s) 589, 1602, 1760, 2224, 2905
SphI GCATGC 3 cut(s) 1677, 2708, 3454
SseBI AGGCCT 1 cut(s) 857
SspMI CTAG 8 cut(s) 225, 1332, 1877, 2417, 2679, 2709, 3053, 3345
SstI GAGCTC 2 cut(s) 278, 3336
StuI AGGCCT 1 cut(s) 857
StyD4I CCNGG 7 cut(s) 398, 406, 439, 544, 876, 1961, 2351
StyI CCWWGG 3 cut(s) 1500, 1747, 3194
TaaI ACNGT 4 cut(s) 464, 1663, 2002, 2676
TaiI ACGT 2 cut(s) 624, 870
TaqI TCGA 8 cut(s) 359, 590, 663, 669, 845, 1163, 3137, 3627
TaqII GACCGA 1 cut(s) 2618
TatI WGTACW 4 cut(s) 1570, 1685, 1938, 2639
TauI GCSGC 3 cut(s) 13, 1955, 2342
TscAI CASTG 7 cut(s) 530, 1033, 1263, 1392, 2215, 2474, 3192
TseFI GTSAC 4 cut(s) 1350, 2050, 2308, 2455
TseI GCWGC 9 cut(s) 787, 980, 1120, 1739, 1949, 2527, 2864, 3035, 3182
Tsp45I GTSAC 4 cut(s) 1350, 2050, 2308, 2455
TspRI CASTG 7 cut(s) 530, 1033, 1263, 1392, 2215, 2474, 3192
Tth111I GACNNNGTC 1 cut(s) 1478
Vha464I CTTAAG 3 cut(s) 1760, 2224, 2905
VpaK11BI GGWCC 4 cut(s) 264, 322, 1023, 1801
XagI CCTNNNNNAGG 1 cut(s) 644
XapI RAATTY 6 cut(s) 1096, 1335, 1537, 1733, 2271, 3511
XbaI TCTAGA 1 cut(s) 2416
XceI RCATGY 6 cut(s) 1677, 2294, 2708, 2765, 3176, 3454
XcmI CCANNNNNNNNNTGG 1 cut(s) 2201
XhoI CTCGAG 1 cut(s) 589
XmiI GTMKAC 2 cut(s) 633, 2588
XmnI GAANNNNTTC 4 cut(s) 45, 416, 926, 3557
XspI CTAG 8 cut(s) 225, 1332, 1877, 2417, 2679, 2709, 3053, 3345
ZraI GACGTC 1 cut(s) 622
ZrmI AGTACT 1 cut(s) 1940
Zsp2I ATGCAT 1 cut(s) 2046
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.