FvH4_6g31560

Condensin II non structural maintenance of chromosomes subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0006247
Physical Location & Seq
Forward (+)
24690945 .. 24696228
5284 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g31560.t1

Sequence Viewer

Length: 3732 bp
ATGGAGAAGCGGCTCCGCTCCTCTCTCCAATCCTCCGCCGAAGAGTTTCTCAGCTCCGCCACCAAGCTCTCCCTCAAATCCTCAAAGCCCTCTCTCAAATCCCTAATCCACAAAATCAAACCCTCCTCCGACCTCTCCTCCTCTCTCCCCACCTCCCTGTCCCTCTCCATTTCCGATGCCATCCGCTCCTTCCACACTCTCCTCCAACCCAACCCTAGATCCCCTCGCTCTCCCCCCACCAAGCGCCCCCGCAGGTCCCGCCGCAGCTCCACGACCCGAACCAGACCCGAACCAGACCCGAATCCCGAAGAGGAGAAGCATCAGATTCTCGTGAAGCTTCAGATTCTCGCCTGTATCGCGCAGCTATGCGCTGCACATCCGGCGAAGGCTTTCTCGCCGGAGGATTTGTTGCCGGGAGTTCAAGCGCTTCACGACAATCTGATTGTTCTGGAGTCGGATTCGACGCTGGTTTCGTTGATTGCGAATCTGTGCGAGCATTGGTGGAAGGAGGAGTGTCCCGGCCGTGAATCGCTGATATCTCAGTCGCTTCCGTTCTTGGTTTCGAGGTCTCTGACGCTTAACAAGAAGGCCGACGTCCTCAGAGCCTACGCCCTCCGCGAGGCCTTCACCTGCTTCGATTTCGAAGACGAGAGCATTGAGGACTTGAAGCTGTTGCTGATTCGGTGTGTGATTTCGCCTCTGTTTCTGAAGACAGAGGAGGGGAGGAAGTTTCTGGCGTTTCTGTTCGGGCTGAGTTCGCAGCTTTTGAAGGAGGTTTTGGCTGTGATCAAGTCTCAGATTCCGTTTGGGAGGAAGTCGATGCTGGAGGCTTATGGCGATGTTGTGTTTCGGGGTTGGAAAGTGGCCGAAGAGGAGTTGAGGAGTGAGATTGAGAATGGATTCTTGCAGGTTTTGATTGAGGGAGCTGTACATGCTAGCTCTGGTTCATTTGCTGCTTCCATTAGAAGGGTTTTGGGAGGGTTTATAAACCAGAGGACCACTGCTGGTGTCGAAAAGCTTCTTTTCCGGCTCTCTGAGCCTGTCATATTTCGCTCTTTGCAGGTTGCGAATTCTAATGTTCGTCAAAATGCGCTGCATTTACTTTTGGACTTGTTCCCTCTTGAAGATCCTGATTCGACTAAAGAGGTCAAAGATTCATTGCTTGAGAAGCAGTTCTTTTTATTGGGGAAATTACTTGTAGATGATTGTCCTGAGGTTAGAGTGGTTGCGGTGGAAGGTTCTTGTCGAATTCTTCATCTGTTTTGGGAAGTAATCCCTTCCCCTACCATCACAAAGTTAGTTACTAAAATTTTCGATGATATGTCACGTGATACAAGTCATGAGGTGAGGCTTTCCACACTGAATGGCACTATGTATTTGTTTGGCAACCCCCTTTGTCATCAGTTTCTCAATGTGCTTCTACCCAGATTGGGCCATTTGATGATGGACAATGTCCTATCAGTAAGAGTTGCCATGGCCGATCTCCTCCTTCTCATAAGGGATATTCAAAATTTCCAGTTCCATAAGGTCGTGAAGTTAGATGTACTATTATCGACCCTTGAAAATGATCAACCTCAAGTTGCTCAGAAAATTACAAGGTTGCTTATGCCATCATACTTTCCCTCGAAAGAAACTGTTCAAACAGCCTGCAATCGTTGTACTACACTTGTAAAAAGGTCTCCAATGGCTGGAGCAAGGTTTTGTGAATTTGCTGCGTCCCAAGGGGCATCTCTTAAGTCTCTGATGGAACTTGTTAGGGTAATGATTACTTTGGTCTTGCCACCTAATTATCTGGATGAACAACAAGTTGAGGGTGTACTTCGTTCTTCTTCCAACCTTTGCAACACTCTAGTTAGTCAGCCAGTTTTCAAGAAGGCACTTAAAGAATTCTTGGATGGTGAAAAGTTGAAGTGCTTAATTGCTGCCGCACCTACCAGGCCTGCTCAGTCTTGTGTATTCAACATTGTATCAACTGTCTCTCCTGATGATGTGGCTGGACTTCTTGATGAATGTATGCACCTGGTTACTGATTGTAGTGGTTTATCCAAAAATGTGGAGAAGCAAGCCGAAGTGAGGTCAGCTCACAATATGTTGCTGTCTTGTGATGCTACTGATGGTATGCTGGAAGCTCTAACAGCACTTCTGCAGAAATCAGCCTATCGTTGCCATATTAAATATGGCAGTGAAATTCCGAACTTGAGTGTTTTCTCTGCAAAAAGAAAGAAATCTAAGTCCTCTGGCAAAATGTCAGCTCAACGGAAAAATGTTGGTGGAAAAAAAGTCACCAGCTTTGAGGAGGATTATTCAGTTGCGGCAGGAATAGCCTGGCAAATCAGGGACTTGCTTGTATCTGTCAATACGCGGAAGGCTGTATTGGGATCTCAAACTCTAGAATCCTTACTTATATGTCTAAAGGTCATTTCCGAAGTCAGCATTCTGCAGTGTATGCATTATGAATGTATGGACACATTTCCTGTTTCAGCATATACAACTCTTGCGCTGCATATGTCCCTTCAAAATGTCTCTTCCAATAAGAATGATAGGACTGATTTATCAGGGTCTACTTTGCAGCAGATCGAGTTGGAACAGGCATTGGATCATGTGCTTAATTGTACAGAGAAGCTATGTGGAGTAGGCGATTCTGGACAGTCTAGCAGAGTTCATTCAGAATCTAAGCATACTAGTGATAAGTCTGTGAGTCGTCGTGAAAAAAGGCACAGAGAACCTCAAACACATGCCTCCATTCCAAGTGATAGTGGAAATGTATATACTGAACCAAAGAAGTTGGTTAACAAGGTGAAGATGCTTACTGCAGTTCAAAGGTTCATGGTTGATGCTGCTACAATAGGTTTTGCCCCTCAATCTCAGGGAAGATGCTTAAGATCCACATCAGGTTATATACGATGTGTCAAATCTACTTTGGAGCAACAACCTAGTGAGCAAATTGATTTTGAGGAGGAAGATTTGAAGGATGTAATTGTCTGTTTGAAAAGCTCCTTCACCTATGCAGCAAAATTACTCGCTCTAGCTCTTAAAGATGCTACTGAAGCTTCACCACCTCCAGCAGAAGCTTCCGATCTTGCCAACGATATGCTTGATTTAATCATCTCGATTGAATTATACTTGGGCTCAACCTATGCTGGACATATGGTGGCAGCAGTGAAGCCTTGGGTTCCTGACTTGATTTTGGCATTAGGATCTGGGCACATTATGAAACAGATTATGGGAGAAGAGACACAAACGAGTCCAGCTGATCGCATCAGAGTCCACTTCCCGTCATGGCTCTTAATTTTAGCCAAGACTGAGCTCTCTGAAGCTAGTGAAGTCCAGCCAGAAGATGAAGGAGATTCTGAAACTGAAGAGTTTCCTGCCTTGAAGAAAATTCTCACAATGATTTTCACATTGTTGAAAGCAAATGTCAGCATGCAGGGTGTGTTTGGGGCGATCTTCATGATTGGTGCTGTAGTGGGGCTCGAGAAGAAAAATTTTGGGTTGGTTTTAGGACTTCTACGGTTTGTATGCCTGAAGGTATTCAAGCATGATGACACAGAATGGGGTGATTTGATGCTGGCATTTCTACAAGATATTTACCCTCAGATTGAGAGAGAAATTGAAGAAGATTGTGATGAAGATGGAAGGGAAAAACTGGAAAAGGCCAAGAGCTTGCTGGAACCTATTTGGTTGTATCATCTGCATGAAACTGGAAGGGTCTCTGTGATGGATGATTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Condensin2nSMC

Protein Analysis

1244

Amino Acids

138.33

Weight (kDa)

6.34

Isoelectric Point (pI)

58.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Condensin2nSMC PF12422 228 - 376 1.1e-55 Condensin II non structural maintenance of chromosomes subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 986
AarI CACCTGC 1 cut(s) 638
AatII GACGTC 1 cut(s) 597
Acc36I ACCTGC 4 cut(s) 243, 638, 898, 1051
AccB7I CCANNNNNTGG 1 cut(s) 1688
AccBSI CCGCTC 2 cut(s) 18, 186
AccI GTMKAC 1 cut(s) 2561
AccII CGCG 3 cut(s) 359, 618, 2362
AclWI GGATC 6 cut(s) 213, 1121, 2386, 2604, 2877, 3205
AcoI YGGCCR 3 cut(s) 520, 864, 1476
AcsI RAATTY 9 cut(s) 1069, 1248, 1308, 1510, 1706, 1886, 2187, 3381, 3484
AcuI CTGAAG 6 cut(s) 323, 728, 3066, 3333, 3378, 3545
AcvI CACGTG 1 cut(s) 1328
AcyI GRCGYC 1 cut(s) 594
AfaI GTAC 5 cut(s) 930, 1545, 1660, 1818, 2614
AfeI AGCGCT 1 cut(s) 426
AfiI CCNNNNNNNGG 5 cut(s) 619, 966, 1430, 1688, 2073
AflII CTTAAG 2 cut(s) 1733, 2878
AhlI ACTAGT 1 cut(s) 2681
AjnI CCWGG 3 cut(s) 1934, 2019, 2324
AjuI GAANNNNNNNTTGG 4 cut(s) 761, 793, 2357, 2389
Alw21I GWGCWC 1 cut(s) 3309
Alw26I GTCTC 8 cut(s) 573, 798, 1683, 1743, 1981, 2527, 3227, 3715
AlwI GGATC 6 cut(s) 213, 1121, 2386, 2604, 2877, 3205
Ama87I CYCGRG 1 cut(s) 3473
Aor51HI AGCGCT 1 cut(s) 426
AoxI GGCC 8 cut(s) 520, 588, 621, 864, 1432, 1476, 1937, 3654
ApoI RAATTY 9 cut(s) 1069, 1248, 1308, 1510, 1706, 1886, 2187, 3381, 3484
ArsI GACNNNNNNTTYG 2 cut(s) 454, 486
Asp700I GAANNNNTTC 8 cut(s) 45, 389, 899, 1017, 1172, 1635, 3363, 3530
AspLEI GCGC 6 cut(s) 246, 361, 371, 427, 1093, 2500
AspS9I GGNCC 3 cut(s) 255, 996, 1432
AsuC2I CCSGG 2 cut(s) 414, 519
AsuHPI GGTGA 8 cut(s) 619, 1357, 1910, 2275, 2809, 2992, 3045, 3569
AsuII TTCGAA 1 cut(s) 642
AsuNHI GCTAGC 1 cut(s) 935
AvaI CYCGRG 1 cut(s) 3473
AvaII GGWCC 2 cut(s) 255, 996
AxyI CCTNAGG 1 cut(s) 1212
BaeGI GKGCMC 1 cut(s) 3207
BanII GRGCYC 3 cut(s) 3131, 3309, 3474
BauI CACGAG 1 cut(s) 329
BbrPI CACGTG 1 cut(s) 1328
BbsI GAAGAC 2 cut(s) 651, 716
Bbv12I GWGCWC 1 cut(s) 3309
BccI CCATC 9 cut(s) 188, 1295, 1438, 1618, 1738, 1889, 2108, 3626, 3712
BceAI ACGGC 1 cut(s) 507
BciT130I CCWGG 3 cut(s) 1936, 2021, 2326
BclI TGATCA 2 cut(s) 786, 1567
BcnI CCSGG 2 cut(s) 414, 519
BcoDI GTCTC 8 cut(s) 573, 798, 1683, 1743, 1981, 2527, 3227, 3715
BcuI ACTAGT 1 cut(s) 2681
BfaI CTAG 9 cut(s) 216, 936, 1850, 2390, 2652, 2682, 2934, 3026, 3318
BfmI CTRYAG 4 cut(s) 2144, 2438, 2811, 3462
BfoI RGCGCY 2 cut(s) 247, 428
BfrI CTTAAG 2 cut(s) 1733, 2878
BfuAI ACCTGC 4 cut(s) 243, 638, 898, 1051
Bme1390I CCNGG 5 cut(s) 414, 519, 1936, 2021, 2326
Bme18I GGWCC 2 cut(s) 255, 996
BmeT110I CYCGRG 1 cut(s) 3473
BmgT120I GGNCC 3 cut(s) 255, 996, 1432
BmiI GGNNCC 4 cut(s) 14, 257, 3174, 3672
BmrFI CCNGG 5 cut(s) 414, 519, 1936, 2021, 2326
BmtI GCTAGC 1 cut(s) 939
BpiI GAAGAC 2 cut(s) 651, 716
BplI GAGNNNNNCTC 2 cut(s) 2065, 2097
BpmI CTGGAG 4 cut(s) 470, 845, 1710, 3045
Bpu14I TTCGAA 1 cut(s) 642
BpuEI CTTGAG 3 cut(s) 1184, 1560, 2218
BpuMI CCSGG 2 cut(s) 414, 519
BsaAI YACGTR 1 cut(s) 1328
BsaBI GATNNNNATC 1 cut(s) 2887
BsaHI GRCGYC 1 cut(s) 594
BsaI GGTCTC 3 cut(s) 573, 1683, 3715
BsaJI CCNNGG 3 cut(s) 1473, 1720, 3167
BsaXI ACNNNNNCTCC 6 cut(s) 122, 152, 392, 422, 1963, 1993
Bsc4I CCNNNNNNNGG 5 cut(s) 619, 966, 1430, 1688, 2073
Bse1I ACTGG 4 cut(s) 1516, 1862, 3651, 3706
Bse21I CCTNAGG 1 cut(s) 1212
Bse3DI GCAATG 1 cut(s) 1157
Bse8I GATNNNNATC 1 cut(s) 2887
BseBI CCWGG 3 cut(s) 1936, 2021, 2326
BseDI CCNNGG 3 cut(s) 1473, 1720, 3167
BseGI GGATG 6 cut(s) 180, 376, 1801, 1900, 2977, 3727
BseJI GATNNNNATC 1 cut(s) 2887
BseLI CCNNNNNNNGG 5 cut(s) 619, 966, 1430, 1688, 2073
BseMI GCAATG 1 cut(s) 1157
BseNI ACTGG 4 cut(s) 1516, 1862, 3651, 3706
BseSI GKGCMC 1 cut(s) 3207
BseX3I CGGCCG 1 cut(s) 520
BsgI GTGCAG 1 cut(s) 357
Bsh1236I CGCG 3 cut(s) 359, 618, 2362
Bsh1285I CGRYCG 1 cut(s) 523
BshFI GGCC 8 cut(s) 522, 590, 623, 866, 1434, 1478, 1939, 3656
BsiEI CGRYCG 1 cut(s) 523
BsiHKAI GWGCWC 1 cut(s) 3309
BsiHKCI CYCGRG 1 cut(s) 3473
BsiSI CCGG 5 cut(s) 380, 398, 413, 519, 1027
BslFI GGGAC 6 cut(s) 145, 241, 501, 1702, 2351, 2494
BslI CCNNNNNNNGG 5 cut(s) 619, 966, 1430, 1688, 2073
BsmAI GTCTC 8 cut(s) 573, 798, 1683, 1743, 1981, 2527, 3227, 3715
BsmFI GGGAC 6 cut(s) 145, 241, 501, 1702, 2351, 2494
BsmI GAATGC 1 cut(s) 2433
BsnI GGCC 8 cut(s) 522, 590, 623, 866, 1434, 1478, 1939, 3656
Bso31I GGTCTC 3 cut(s) 573, 1683, 3715
BsoBI CYCGRG 1 cut(s) 3473
Bsp119I TTCGAA 1 cut(s) 642
Bsp1286I GDGCHC 4 cut(s) 3131, 3207, 3309, 3474
Bsp1407I TGTACA 2 cut(s) 928, 2612
Bsp19I CCATGG 1 cut(s) 1473
BspANI GGCC 8 cut(s) 522, 590, 623, 866, 1434, 1478, 1939, 3656
BspFNI CGCG 3 cut(s) 359, 618, 2362
BspHI TCATGA 2 cut(s) 1339, 3450
BspLI GGNNCC 4 cut(s) 14, 257, 3174, 3672
BspMAI CTGCAG 3 cut(s) 2148, 2442, 2815
BspMI ACCTGC 4 cut(s) 243, 638, 898, 1051
BspOI GCTAGC 1 cut(s) 939
BspPI GGATC 6 cut(s) 213, 1121, 2386, 2604, 2877, 3205
BspT104I TTCGAA 1 cut(s) 642
BspTI CTTAAG 2 cut(s) 1733, 2878
BspTNI GGTCTC 3 cut(s) 573, 1683, 3715
BsrBI CCGCTC 2 cut(s) 18, 186
BsrDI GCAATG 1 cut(s) 1157
BsrGI TGTACA 2 cut(s) 928, 2612
BsrI ACTGG 4 cut(s) 1516, 1862, 3651, 3706
BssECI CCNNGG 3 cut(s) 1473, 1720, 3167
BssNI GRCGYC 1 cut(s) 594
BssSI CACGAG 1 cut(s) 329
BssT1I CCWWGG 3 cut(s) 1473, 1720, 3167
Bst2BI CACGAG 1 cut(s) 329
Bst2UI CCWGG 3 cut(s) 1936, 2021, 2326
Bst4CI ACNGT 4 cut(s) 1636, 1975, 2649, 3513
Bst6I CTCTTC 6 cut(s) 36, 303, 864, 2530, 3225, 3354
BstACI GRCGYC 1 cut(s) 594
BstAFI CTTAAG 2 cut(s) 1733, 2878
BstAPI GCANNNNNTGC 1 cut(s) 2446
BstAUI TGTACA 2 cut(s) 928, 2612
BstBAI YACGTR 1 cut(s) 1328
BstBI TTCGAA 1 cut(s) 642
BstC8I GCNNGC 8 cut(s) 494, 937, 1648, 1941, 2064, 3425, 3570, 3665
BstDSI CCRYGG 1 cut(s) 1473
BstENI CCTNNNNNAGG 1 cut(s) 617
BstF5I GGATG 6 cut(s) 180, 376, 1801, 1900, 2977, 3727
BstFNI CGCG 3 cut(s) 359, 618, 2362
BstH2I RGCGCY 2 cut(s) 247, 428
BstHHI GCGC 6 cut(s) 246, 361, 371, 427, 1093, 2500
BstMAI GTCTC 8 cut(s) 573, 798, 1683, 1743, 1981, 2527, 3227, 3715
BstMCI CGRYCG 1 cut(s) 523
BstNI CCWGG 3 cut(s) 1936, 2021, 2326
BstNSI RCATGY 3 cut(s) 935, 2738, 3427
BstSCI CCNGG 5 cut(s) 412, 517, 1934, 2019, 2324
BstSFI CTRYAG 4 cut(s) 2144, 2438, 2811, 3462
BstSLI GKGCMC 1 cut(s) 3207
BstUI CGCG 3 cut(s) 359, 618, 2362
BstV2I GAAGAC 2 cut(s) 651, 716
BstX2I RGATCY 5 cut(s) 218, 1126, 2378, 2882, 3197
BstXI CCANNNNNNTGG 1 cut(s) 2053
BstYI RGATCY 5 cut(s) 218, 1126, 2378, 2882, 3197
BstZI CGGCCG 1 cut(s) 520
Bsu36I CCTNAGG 1 cut(s) 1212
BsuRI GGCC 8 cut(s) 522, 590, 623, 866, 1434, 1478, 1939, 3656
BtgI CCRYGG 1 cut(s) 1473
BtgZI GCGATG 1 cut(s) 852
BtsCI GGATG 6 cut(s) 180, 376, 1801, 1900, 2977, 3727
BtsI GCAGTG 4 cut(s) 999, 2188, 2447, 3165
BtsIMutI CAGTG 5 cut(s) 999, 1358, 2188, 2447, 3165
BveI ACCTGC 4 cut(s) 243, 638, 898, 1051
Cac8I GCNNGC 8 cut(s) 494, 937, 1648, 1941, 2064, 3425, 3570, 3665
CciI TCATGA 2 cut(s) 1339, 3450
CfoI GCGC 6 cut(s) 246, 361, 371, 427, 1093, 2500
Cfr13I GGNCC 3 cut(s) 255, 996, 1432
CseI GACGC 3 cut(s) 472, 583, 1704
CsiI ACCWGGT 1 cut(s) 2019
Csp6I GTAC 5 cut(s) 929, 1544, 1659, 1817, 2613
CviQI GTAC 5 cut(s) 929, 1544, 1659, 1817, 2613
EaeI YGGCCR 3 cut(s) 520, 864, 1476
EagI CGGCCG 1 cut(s) 520
Eam1104I CTCTTC 6 cut(s) 36, 303, 864, 2530, 3225, 3354
EarI CTCTTC 6 cut(s) 36, 303, 864, 2530, 3225, 3354
EciI GGCGGA 2 cut(s) 25, 46
Ecl136II GAGCTC 1 cut(s) 3307
EclXI CGGCCG 1 cut(s) 520
Eco130I CCWWGG 3 cut(s) 1473, 1720, 3167
Eco147I AGGCCT 2 cut(s) 623, 1939
Eco24I GRGCYC 3 cut(s) 3131, 3309, 3474
Eco31I GGTCTC 3 cut(s) 573, 1683, 3715
Eco32I GATATC 1 cut(s) 537
Eco47I GGWCC 2 cut(s) 255, 996
Eco47III AGCGCT 1 cut(s) 426
Eco52I CGGCCG 1 cut(s) 520
Eco53kI GAGCTC 1 cut(s) 3307
Eco57I CTGAAG 6 cut(s) 323, 728, 3066, 3333, 3378, 3545
Eco72I CACGTG 1 cut(s) 1328
Eco81I CCTNAGG 1 cut(s) 1212
Eco88I CYCGRG 1 cut(s) 3473
EcoICRI GAGCTC 1 cut(s) 3307
EcoNI CCTNNNNNAGG 1 cut(s) 617
EcoO109I RGGNCCY 1 cut(s) 255
EcoRI GAATTC 3 cut(s) 1069, 1248, 1886
EcoRII CCWGG 3 cut(s) 1934, 2019, 2324
EcoRV GATATC 1 cut(s) 537
EcoT14I CCWWGG 3 cut(s) 1473, 1720, 3167
EcoT22I ATGCAT 1 cut(s) 2451
EcoT38I GRGCYC 3 cut(s) 3131, 3309, 3474
ErhI CCWWGG 3 cut(s) 1473, 1720, 3167
FalI AAGNNNNNCTT 2 cut(s) 1160, 1192
FaqI GGGAC 6 cut(s) 145, 241, 501, 1702, 2351, 2494
FauI CCCGC 2 cut(s) 257, 266
FauNDI CATATG 2 cut(s) 2505, 3147
FbaI TGATCA 2 cut(s) 786, 1567
FblI GTMKAC 1 cut(s) 2561
FokI GGATG 5 cut(s) 167, 363, 1808, 1907, 2984
FriOI GRGCYC 3 cut(s) 3131, 3309, 3474
FspBI CTAG 9 cut(s) 216, 936, 1850, 2390, 2652, 2682, 2934, 3026, 3318
GlaI GCGC 6 cut(s) 245, 360, 370, 426, 1092, 2499
GsuI CTGGAG 4 cut(s) 470, 845, 1710, 3045
HaeII RGCGCY 2 cut(s) 247, 428
HaeIII GGCC 8 cut(s) 522, 590, 623, 866, 1434, 1478, 1939, 3656
HapII CCGG 5 cut(s) 380, 398, 413, 519, 1027
HgaI GACGC 3 cut(s) 472, 583, 1704
HhaI GCGC 6 cut(s) 246, 361, 371, 427, 1093, 2500
Hin1I GRCGYC 1 cut(s) 594
Hin6I GCGC 6 cut(s) 244, 359, 369, 425, 1091, 2498
HinP1I GCGC 6 cut(s) 244, 359, 369, 425, 1091, 2498
HincII GTYRAC 1 cut(s) 2791
HindII GTYRAC 1 cut(s) 2791
HindIII AAGCTT 4 cut(s) 335, 1016, 3048, 3069
HpaI GTTAAC 1 cut(s) 2791
HpaII CCGG 5 cut(s) 380, 398, 413, 519, 1027
HphI GGTGA 8 cut(s) 619, 1357, 1910, 2275, 2809, 2992, 3045, 3569
Hpy166II GTNNAC 4 cut(s) 1817, 2562, 2791, 3268
Hpy8I GTNNAC 4 cut(s) 1817, 2562, 2791, 3268
Hpy99I CGWCG 3 cut(s) 466, 596, 2706
HpyCH4III ACNGT 4 cut(s) 1636, 1975, 2649, 3513
HpyCH4IV ACGT 2 cut(s) 594, 1327
HpySE526I ACGT 2 cut(s) 594, 1327
Hsp92I GRCGYC 1 cut(s) 594
HspAI GCGC 6 cut(s) 244, 359, 369, 425, 1091, 2498
Ksp22I TGATCA 2 cut(s) 786, 1567
KspAI GTTAAC 1 cut(s) 2791
LmnI GCTCC 9 cut(s) 18, 23, 59, 191, 272, 923, 1691, 2923, 2999
MabI ACCWGGT 1 cut(s) 2019
MaeI CTAG 9 cut(s) 216, 936, 1850, 2390, 2652, 2682, 2934, 3026, 3318
MaeII ACGT 2 cut(s) 594, 1327
MaeIII GTNAC 4 cut(s) 1300, 1323, 2023, 2281
MbiI CCGCTC 2 cut(s) 18, 186
MflI RGATCY 5 cut(s) 218, 1126, 2378, 2882, 3197
MhlI GDGCHC 4 cut(s) 3131, 3207, 3309, 3474
MlyI GAGTC 4 cut(s) 461, 2707, 3253, 3273
MmeI TCCRAC 6 cut(s) 153, 229, 435, 836, 1857, 2562
Mph1103I ATGCAT 1 cut(s) 2451
MroXI GAANNNNTTC 8 cut(s) 45, 389, 899, 1017, 1172, 1635, 3363, 3530
MslI CAYNNNNRTG 2 cut(s) 2682, 3693
MspA1I CMGCKG 1 cut(s) 3251
MspCI CTTAAG 2 cut(s) 1733, 2878
MspI CCGG 5 cut(s) 380, 398, 413, 519, 1027
MspR9I CCNGG 5 cut(s) 414, 519, 1936, 2021, 2326
Mva1269I GAATGC 1 cut(s) 2433
MvaI CCWGG 3 cut(s) 1936, 2021, 2326
MvnI CGCG 3 cut(s) 359, 618, 2362
NciI CCSGG 2 cut(s) 414, 519
NcoI CCATGG 1 cut(s) 1473
NdeI CATATG 2 cut(s) 2505, 3147
NheI GCTAGC 1 cut(s) 935
NlaIV GGNNCC 4 cut(s) 14, 257, 3174, 3672
NmuCI GTSAC 2 cut(s) 1323, 2281
NsiI ATGCAT 1 cut(s) 2451
NspI RCATGY 3 cut(s) 935, 2738, 3427
NspV TTCGAA 1 cut(s) 642
PaeI GCATGC 1 cut(s) 3427
PaeR7I CTCGAG 1 cut(s) 3473
PagI TCATGA 2 cut(s) 1339, 3450
PaqCI CACCTGC 1 cut(s) 638
PceI AGGCCT 2 cut(s) 623, 1939
PcsI WCGNNNNNNNCGW 3 cut(s) 470, 479, 615
PctI GAATGC 1 cut(s) 2433
PdmI GAANNNNTTC 8 cut(s) 45, 389, 899, 1017, 1172, 1635, 3363, 3530
PflFI GACNNNGTC 1 cut(s) 1451
PflMI CCANNNNNTGG 1 cut(s) 1688
PleI GAGTC 4 cut(s) 460, 2706, 3252, 3272
PmaCI CACGTG 1 cut(s) 1328
PmlI CACGTG 1 cut(s) 1328
PpsI GAGTC 4 cut(s) 460, 2706, 3252, 3272
Ppu21I YACGTR 1 cut(s) 1328
PpuMI RGGWCCY 1 cut(s) 255
PsiI TTATAA 1 cut(s) 986
Psp124BI GAGCTC 1 cut(s) 3309
Psp5II RGGWCCY 1 cut(s) 255
Psp6I CCWGG 3 cut(s) 1934, 2019, 2324
PspCI CACGTG 1 cut(s) 1328
PspGI CCWGG 3 cut(s) 1934, 2019, 2324
PspN4I GGNNCC 4 cut(s) 14, 257, 3174, 3672
PspPI GGNCC 3 cut(s) 255, 996, 1432
PspPPI RGGWCCY 1 cut(s) 255
PstI CTGCAG 3 cut(s) 2148, 2442, 2815
PsuI RGATCY 5 cut(s) 218, 1126, 2378, 2882, 3197
PsyI GACNNNGTC 1 cut(s) 1451
PvuII CAGCTG 1 cut(s) 3251
RsaI GTAC 5 cut(s) 930, 1545, 1660, 1818, 2614
RsaNI GTAC 5 cut(s) 929, 1544, 1659, 1817, 2613
RseI CAYNNNNRTG 2 cut(s) 2682, 3693
SacI GAGCTC 1 cut(s) 3309
Sau96I GGNCC 3 cut(s) 255, 996, 1432
SchI GAGTC 4 cut(s) 461, 2707, 3253, 3273
ScrFI CCNGG 5 cut(s) 414, 519, 1936, 2021, 2326
SduI GDGCHC 4 cut(s) 3131, 3207, 3309, 3474
SexAI ACCWGGT 1 cut(s) 2019
SfcI CTRYAG 4 cut(s) 2144, 2438, 2811, 3462
Sfr274I CTCGAG 1 cut(s) 3473
SfuI TTCGAA 1 cut(s) 642
SinI GGWCC 2 cut(s) 255, 996
SlaI CTCGAG 1 cut(s) 3473
SmiMI CAYNNNNRTG 2 cut(s) 2682, 3693
SmlI CTYRAG 6 cut(s) 1163, 1575, 1733, 2197, 2878, 3473
SmoI CTYRAG 6 cut(s) 1163, 1575, 1733, 2197, 2878, 3473
SpeI ACTAGT 1 cut(s) 2681
SphI GCATGC 1 cut(s) 3427
SseBI AGGCCT 2 cut(s) 623, 1939
SspMI CTAG 9 cut(s) 216, 936, 1850, 2390, 2652, 2682, 2934, 3026, 3318
SstI GAGCTC 1 cut(s) 3309
StuI AGGCCT 2 cut(s) 623, 1939
StyD4I CCNGG 5 cut(s) 412, 517, 1934, 2019, 2324
StyI CCWWGG 3 cut(s) 1473, 1720, 3167
TaaI ACNGT 4 cut(s) 1636, 1975, 2649, 3513
TaiI ACGT 2 cut(s) 597, 1330
TatI WGTACW 5 cut(s) 928, 1543, 1658, 1816, 2612
TauI GCSGC 4 cut(s) 13, 264, 1928, 2315
TscAI CASTG 5 cut(s) 1006, 1365, 2188, 2447, 3165
TseFI GTSAC 2 cut(s) 1323, 2281
Tsp45I GTSAC 2 cut(s) 1323, 2281
TspGWI ACGGA 3 cut(s) 540, 792, 2272
TspRI CASTG 5 cut(s) 1006, 1365, 2188, 2447, 3165
Tth111I GACNNNGTC 1 cut(s) 1451
Van91I CCANNNNNTGG 1 cut(s) 1688
Vha464I CTTAAG 2 cut(s) 1733, 2878
VpaK11BI GGWCC 2 cut(s) 255, 996
XagI CCTNNNNNAGG 1 cut(s) 617
XapI RAATTY 9 cut(s) 1069, 1248, 1308, 1510, 1706, 1886, 2187, 3381, 3484
XbaI TCTAGA 1 cut(s) 2389
XceI RCATGY 3 cut(s) 935, 2738, 3427
XcmI CCANNNNNNNNNTGG 2 cut(s) 2174, 3664
XhoI CTCGAG 1 cut(s) 3473
XmiI GTMKAC 1 cut(s) 2561
XmnI GAANNNNTTC 8 cut(s) 45, 389, 899, 1017, 1172, 1635, 3363, 3530
XspI CTAG 9 cut(s) 216, 936, 1850, 2390, 2652, 2682, 2934, 3026, 3318
ZraI GACGTC 1 cut(s) 595
Zsp2I ATGCAT 1 cut(s) 2451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.