Rroxscaffold_2G00106270

Condensin II non structural maintenance of chromosomes subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0006247
Physical Location & Seq
Reverse (-)
29844822 .. 29852710
7889 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00106270.1

Sequence Viewer

Length: 3681 bp
ATGGAGAAGCGGCTCCGCTCCTCTCTCCAATCCTCCGCCGAAGAGTTTCTAACCTCCGCCACCAAGCTCAGCCTCAAATCCTCAAAGCCCTCTCTCAAAACCCTAATCCACAAAATCAAACCCTCCTCCGACCTCTCCTCCTCTCTCCCCATCTCTCTCTCCCACTCCATTTCCGACGCCATCCTCTCCTTCCAGACCCTTCTTCTTCAACCCAACCCCAACCCTAGATCCCCTCGCTCTCCCCCACCAAGCGCCCCCGCAGAGGAGAAGCATCAACTGCTCTCGAAGCTTCAGATTCTCGCCTGTATCGCCCAACTATGCGCCGGGCATCCGGCGAAGGCGTTCCAGCCGTTGGATTTGTTGCCGGGAGTTCAAGCGCTTCACGACAGTCTGATAATTCTGGAGTCGGACTCGGCGCTGGTATCGGCGATTCCGAGCTTGTGCGAGCAGTGGTGGAAGGAGGAGTTGCCGGGCCGAGAATCGCTGATCTCTCAGTCGCTCCCTCTCTTGCTCTCGAGATCTCTCACTCTGAACAAGAAGGCAGACGTCCACAGAGTCTACGCCCTCCGCGAGGCTTTCACCTGCTTCGATTTCGAGGACGAGAGCATTGAGGACTTGAAGCTGTTGCTAATCCGGTGCGTGATTTCGCCGCTGTTTCTGAAAACAGAGGAGGGGAGGAAGTTTCTGGCGTTTCTGTTTGGGTTGAGTTCGCAACTGTTGAAGGAGGTTTTGGCTGTAATCAAGTCTCAGATTCCGTTTGGAAGGAAGTCAATGCTGGAGGCCTACGGTGACGTTTTGTTCCGGGCTTGGAAAGTGGCAGAGGGGGAGCTGAGGAGTGAGATTGAGAACGGGTTCTTGCAGGTTTTGATTGAGGGTGCTATACACGCCAGCTCTGGAGCATTTGCTGCTTCTATTAGAAGGGTTTTGGGAGGGTTTATAAACCAGAGGACCACTGCTGGTGTCGAGAAGCTTCTCTTCCAGCTCTCAGAGCCTGTCATATTTCGCTCTTTGCAGGTTGCGAATTCTAATGTTCGTCAAAATGCGCTGCATTTACTTTTGGACTTGTTCCCTCTTGAAGATCCTGATTCGACTAAAGAGGTTAAAGATTCATTGCTTGATAAGCAGTTCTTTTTATTGGGGAAATTACTTGTAGATGATTGTCCAGAGGTGAGGGTGGTTGCAGTGGAAGGTTCTTGTCGTATTCTTCATCTGTTTTGGGAAGTAATCCCTTCGCCTACCATCACAAAGTTAGTTACTAGAATTTTTGATGATATGTCACATGATACAAGTCATGAGGTCAGGCTTTCCACACTGAATGGCACTATGTATTTGTTTGGCAATCCTCTATGTCATCAATTTCTCAATGTGCTGCTACCCAGATTGGGGCATTTGATGATGGACAATGTCCTATCAATAAGAGTTGCCATGGTAGATCTCCTCCTTCTCATAAGGGATATTCAAAACTTCCAGTTCCATAAGGTAGTGAAGTTAGATGTACTATTATCTACCCTTGAAAATGATCAATCTCAAGTTGCTCAGAAAATTACAAGGTTGCTTATGCCATCATACTTTCCCTCAAAAGAAACTGTTGAAACAGCATGCAATCGTTGTACTACACTTGTAAAAAGGTCTCCGATGGCTGGAGCAAGGTTTTGTGAATTTGCTGCGTCCCAAGGGGCATCTCTTAAGTCTCTGATGGAACTTGTTAGGGTAATGATTACTTTGGTCCTTCCACCTAATAATCTGGATGAACAACAAGTTGAGGGTTTACTTACTTCTTCTTCCAACCTTTGCAATACCCTAGCTGGTGATCCAGTTTTCAAGAAGGAGCTTAAAGAATTCTTTGATGGTGAAAAGTTGAAGTACTTGATTGCTGCTGCACCTACCGGGCCTGCTCAGTCTTGTGTATTCAACATTGTTTCAACTGTCTCTCCTGATGATGTGGCTGGACTTCTTGATGAATGTATGCATCTGGTGACTAATTGTAGTGGTTTATCCAAAAATGTGGAGAAGCAATCTGAAGTGAGGTCTGCTCACAATTTGTTGCTGTCTTGTGATGCGATTGATGGTATGCTGGAAGCTCTAACAGCACTTCTGCAGAAATCAGCCTATCGTTGCCATATTAAATATGGCAGTGAAATTAAGAACTTAAGTGTTTTCTCTGCGAAAAGAAAGAAATCAAAGTCCTCTGGCAAAATTTCAGCTCGACAGAAACATGTTAGTGGAAAAAAAGTCACCAGTTTTGAGGACGATTATTCAGTCGCGGCAGGAATAGCCTGGCAAATCAGGGACTTGCTTGTATCTGTCAATACTCGGAAGGCTATATTGGGATCTCAAACTCTAGAATCTTTACTAATATGTCTAAAGGTCATTTCTGAGGTCAGCATTGTGCAGTGCATGGATTATGAATATGTGGACACATTTCCTGTTTCAGCATATACAGCTCTTGCGCTGCATTTGTCGGTTCAAAATGTCTCTTCCAATAAGAATGACGGGACGGATTCATCAGGGTCTACTTTGGAGCAGACCAAGTTGGAACCGGCATTGGATCATGTGCTTAATTGTACAGAGAAGCTATGTGGAATAGGCGATTCTGGACAGTCTAGCAGAGTTTATTCAGAATCTAAGCATGCTAGTGATAAGTCTGCGAGTCGTCGTGAAAAAAGGCACAGAGAACCTCAAACACATGCCTCCATTGCAAGTGATAGTGGAAATGTATATACTGAACCAAAGAAGTTGGCGAACAAGGTGAAGATGCTTACTGCAGTACAAAGGTTCATGGTTGATGCTGCTACAATAGGTTTTGCTCCTCAAACTCTGGAAAGGTGCTTAAGATCCACATCAGGTCATATACGATGTGTCATATCTACTTTGGAGCAACAACCTCGTGAGCAAATTGATTTTGAGGAGGAAGATTTGAAGGATGTAGTTCTCTGTTTGAAAAGCTCCTCCACCTATGCAGCAAAGTTACTTAATCTAGCTCTTAAAGATGCTACTGAAGCTTCACCACCTCCAGCAGAAGCTTCTGATCTTGCCAACGATATGCTTGATTTAATTATCTCGATTGAATTATATTTGGGCTCAACCTATGCTGGACATGTGGTGGCAGCAGTGAAGCCTTGGGTTCCTGACTTGATTTTGGCATTAGGATCTGGACACATTATGAAACAGATTATAGGAGAAGAGGGTCAAACGAGTCCAGCTGATCGCATCAGAGTCCACTTTCCATCATGGTTCTTAATTTTAGCCAAGAATGAGCTCTCTGAAGCTAGTGAAGTCCGGCCAGAAGATGATGGAGACTCTGAACCTGAGGAGTTTCCTGCTTTCAAAAAACTTCTTACAATGATTGCCAAATTGTTAAAAGAAAATCTCAGCATGCAGGGTGTGTTTGGGGCGATCTTAATGATTGGCGCTATAGTAGGGCTGGAAAAGAAAAATTTTGGGCTGGTTTTCGGACTTCTACAGTTTGTATGCCTGAAGATATTCAAGCATGATGATAGAGAATGGGGTGATTTGACGTTGGCATTTCTGCAAGATATCTACCCTCAGATCGAGAGAGAAATTGAGGAAGAGTGTGATGAAGATGGAAGGGAAAAACTGGAAAAAGCCAAGGACTTGCTGGAACCTATTTGGTTGTATCATCTGCATGAAACTGGGAGGGTCTCTATGAGGGAGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Condensin2nSMC

Protein Analysis

1226

Amino Acids

135.88

Weight (kDa)

5.91

Isoelectric Point (pI)

50.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Condensin2nSMC PF12422 212 - 360 1.1e-56 Condensin II non structural maintenance of chromosomes subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 938
AarI CACCTGC 1 cut(s) 590
AatII GACGTC 1 cut(s) 549
Acc36I ACCTGC 3 cut(s) 590, 850, 1003
AccB7I CCANNNNNTGG 1 cut(s) 352
AccBSI CCGCTC 1 cut(s) 18
AccI GTMKAC 2 cut(s) 558, 2513
AccII CGCG 2 cut(s) 570, 2264
AciI CCGC 8 cut(s) 10, 16, 36, 57, 258, 568, 650, 2264
AclWI GGATC 7 cut(s) 222, 1073, 1805, 2338, 2556, 2829, 3157
AcoI YGGCCR 1 cut(s) 3281
AcsI RAATTY 6 cut(s) 1021, 1260, 1658, 1838, 2196, 3436
AcuI CTGAAG 5 cut(s) 275, 2040, 3018, 3285, 3497
AcyI GRCGYC 2 cut(s) 177, 546
AfaI GTAC 5 cut(s) 1497, 1612, 1865, 2566, 2769
AfeI AGCGCT 1 cut(s) 378
AfiI CCNNNNNNNGG 6 cut(s) 262, 352, 571, 1382, 1383, 1640
AflII CTTAAG 3 cut(s) 1685, 2149, 2830
AflIII ACRYGT 2 cut(s) 2215, 3097
AjnI CCWGG 1 cut(s) 2276
AjuI GAANNNNNNNTTGG 4 cut(s) 713, 745, 2309, 2341
Alw21I GWGCWC 1 cut(s) 3261
Alw26I GTCTC 7 cut(s) 750, 1635, 1695, 1933, 2479, 3291, 3667
AlwI GGATC 7 cut(s) 222, 1073, 1805, 2338, 2556, 2829, 3157
AlwNI CAGNNNCTG 1 cut(s) 992
Ama87I CYCGRG 1 cut(s) 514
Aor51HI AGCGCT 1 cut(s) 378
AoxI GGCC 4 cut(s) 472, 780, 1889, 3281
ApoI RAATTY 6 cut(s) 1021, 1260, 1658, 1838, 2196, 3436
Asp700I GAANNNNTTC 4 cut(s) 45, 341, 851, 3482
AspLEI GCGC 7 cut(s) 254, 323, 379, 418, 1045, 2452, 3413
AspS9I GGNCC 4 cut(s) 472, 948, 1726, 1889
AsuC2I CCSGG 5 cut(s) 325, 366, 471, 803, 1888
AvaI CYCGRG 1 cut(s) 514
AvaII GGWCC 2 cut(s) 948, 1726
AxyI CCTNAGG 1 cut(s) 3309
BanII GRGCYC 2 cut(s) 3083, 3261
BauI CACGAG 1 cut(s) 2886
Bbv12I GWGCWC 1 cut(s) 3261
BbvCI CCTCAGC 1 cut(s) 830
BceAI ACGGC 1 cut(s) 334
BcgI CGANNNNNNTGC 2 cut(s) 2867, 2901
BciT130I CCWGG 1 cut(s) 2278
BclI TGATCA 1 cut(s) 1519
BcnI CCSGG 5 cut(s) 325, 366, 471, 803, 1888
BcoDI GTCTC 7 cut(s) 750, 1635, 1695, 1933, 2479, 3291, 3667
BfaI CTAG 8 cut(s) 225, 1257, 1802, 2342, 2604, 2634, 2978, 3270
BfmI CTRYAG 4 cut(s) 2096, 2763, 3414, 3461
BfoI RGCGCY 4 cut(s) 255, 380, 419, 3414
BfrI CTTAAG 3 cut(s) 1685, 2149, 2830
BfuAI ACCTGC 3 cut(s) 590, 850, 1003
BglII AGATCT 2 cut(s) 518, 1432
BlpI GCTNAGC 1 cut(s) 68
BmcAI AGTACT 1 cut(s) 1865
Bme1390I CCNGG 6 cut(s) 325, 366, 471, 803, 1888, 2278
Bme18I GGWCC 2 cut(s) 948, 1726
BmeT110I CYCGRG 1 cut(s) 514
BmgT120I GGNCC 4 cut(s) 472, 948, 1726, 1889
BmiI GGNNCC 4 cut(s) 14, 2538, 3126, 3624
BmrFI CCNGG 6 cut(s) 325, 366, 471, 803, 1888, 2278
BmrI ACTGGG 1 cut(s) 3663
BmsI GCATC 9 cut(s) 280, 337, 1688, 1978, 2047, 2745, 2776, 2980, 3219
BmuI ACTGGG 1 cut(s) 3663
BplI GAGNNNNNCTC 4 cut(s) 395, 427, 2017, 2049
BpmI CTGGAG 5 cut(s) 422, 797, 915, 1662, 2997
Bpu10I CCTNAGC 1 cut(s) 830
Bpu1102I GCTNAGC 1 cut(s) 68
BpuEI CTTGAG 1 cut(s) 1512
BpuMI CCSGG 5 cut(s) 325, 366, 471, 803, 1888
BsaBI GATNNNNATC 1 cut(s) 2839
BsaHI GRCGYC 2 cut(s) 177, 546
BsaI GGTCTC 2 cut(s) 1635, 3667
BsaJI CCNNGG 4 cut(s) 1425, 1672, 3119, 3609
BsaWI WCCGGW 1 cut(s) 633
BsaXI ACNNNNNCTCC 4 cut(s) 122, 152, 1915, 1945
Bsc4I CCNNNNNNNGG 6 cut(s) 262, 352, 571, 1382, 1383, 1640
Bse118I RCCGGY 1 cut(s) 2539
Bse1I ACTGG 5 cut(s) 1468, 1814, 2238, 3603, 3658
Bse21I CCTNAGG 1 cut(s) 3309
Bse3DI GCAATG 2 cut(s) 1109, 2694
Bse8I GATNNNNATC 1 cut(s) 2839
BseBI CCWGG 1 cut(s) 2278
BseDI CCNNGG 4 cut(s) 1425, 1672, 3119, 3609
BseGI GGATG 4 cut(s) 180, 328, 1753, 2929
BseJI GATNNNNATC 1 cut(s) 2839
BseLI CCNNNNNNNGG 6 cut(s) 262, 352, 571, 1382, 1383, 1640
BseMI GCAATG 2 cut(s) 1109, 2694
BseNI ACTGG 5 cut(s) 1468, 1814, 2238, 3603, 3658
BsgI GTGCAG 2 cut(s) 1863, 2411
Bsh1236I CGCG 2 cut(s) 570, 2264
BshFI GGCC 4 cut(s) 474, 782, 1891, 3283
BsiHKAI GWGCWC 1 cut(s) 3261
BsiHKCI CYCGRG 1 cut(s) 514
BsiSI CCGG 9 cut(s) 324, 332, 365, 470, 634, 802, 1887, 2540, 3280
BslFI GGGAC 3 cut(s) 1654, 2303, 2509
BslI CCNNNNNNNGG 6 cut(s) 262, 352, 571, 1382, 1383, 1640
BsmAI GTCTC 7 cut(s) 750, 1635, 1695, 1933, 2479, 3291, 3667
BsmFI GGGAC 3 cut(s) 1654, 2303, 2509
BsnI GGCC 4 cut(s) 474, 782, 1891, 3283
Bso31I GGTCTC 2 cut(s) 1635, 3667
BsoBI CYCGRG 1 cut(s) 514
Bsp1286I GDGCHC 2 cut(s) 3083, 3261
Bsp1407I TGTACA 1 cut(s) 2564
Bsp1720I GCTNAGC 1 cut(s) 68
Bsp19I CCATGG 1 cut(s) 1425
BspACI CCGC 8 cut(s) 10, 16, 36, 57, 258, 568, 650, 2264
BspANI GGCC 4 cut(s) 474, 782, 1891, 3283
BspFNI CGCG 2 cut(s) 570, 2264
BspHI TCATGA 1 cut(s) 1291
BspLI GGNNCC 4 cut(s) 14, 2538, 3126, 3624
BspMAI CTGCAG 2 cut(s) 2100, 2767
BspMI ACCTGC 3 cut(s) 590, 850, 1003
BspPI GGATC 7 cut(s) 222, 1073, 1805, 2338, 2556, 2829, 3157
BspTI CTTAAG 3 cut(s) 1685, 2149, 2830
BspTNI GGTCTC 2 cut(s) 1635, 3667
BsrBI CCGCTC 1 cut(s) 18
BsrDI GCAATG 2 cut(s) 1109, 2694
BsrFI RCCGGY 1 cut(s) 2539
BsrGI TGTACA 1 cut(s) 2564
BsrI ACTGG 5 cut(s) 1468, 1814, 2238, 3603, 3658
BssAI RCCGGY 1 cut(s) 2539
BssECI CCNNGG 4 cut(s) 1425, 1672, 3119, 3609
BssNI GRCGYC 2 cut(s) 177, 546
BssSI CACGAG 1 cut(s) 2886
BssT1I CCWWGG 4 cut(s) 1425, 1672, 3119, 3609
Bst2BI CACGAG 1 cut(s) 2886
Bst2UI CCWGG 1 cut(s) 2278
Bst4CI ACNGT 7 cut(s) 389, 717, 788, 1588, 1927, 2601, 3465
Bst6I CTCTTC 5 cut(s) 36, 980, 2482, 3177, 3564
BstACI GRCGYC 2 cut(s) 177, 546
BstAFI CTTAAG 3 cut(s) 1685, 2149, 2830
BstAPI GCANNNNNTGC 2 cut(s) 277, 905
BstAUI TGTACA 1 cut(s) 2564
BstC8I GCNNGC 6 cut(s) 446, 889, 1600, 1893, 2631, 3377
BstDSI CCRYGG 1 cut(s) 1425
BstENI CCTNNNNNAGG 1 cut(s) 569
BstF5I GGATG 4 cut(s) 180, 328, 1753, 2929
BstFNI CGCG 2 cut(s) 570, 2264
BstH2I RGCGCY 4 cut(s) 255, 380, 419, 3414
BstHHI GCGC 7 cut(s) 254, 323, 379, 418, 1045, 2452, 3413
BstMAI GTCTC 7 cut(s) 750, 1635, 1695, 1933, 2479, 3291, 3667
BstNI CCWGG 1 cut(s) 2278
BstNSI RCATGY 6 cut(s) 1602, 2219, 2633, 2690, 3101, 3379
BstSCI CCNGG 6 cut(s) 323, 364, 469, 801, 1886, 2276
BstSFI CTRYAG 4 cut(s) 2096, 2763, 3414, 3461
BstUI CGCG 2 cut(s) 570, 2264
BstX2I RGATCY 7 cut(s) 227, 518, 1078, 1432, 2330, 2834, 3149
BstXI CCANNNNNNTGG 1 cut(s) 2005
BstYI RGATCY 7 cut(s) 227, 518, 1078, 1432, 2330, 2834, 3149
Bsu36I CCTNAGG 1 cut(s) 3309
BsuRI GGCC 4 cut(s) 474, 782, 1891, 3283
BtgI CCRYGG 1 cut(s) 1425
BtsCI GGATG 4 cut(s) 180, 328, 1753, 2929
BtsI GCAGTG 6 cut(s) 455, 951, 1188, 2140, 2399, 3117
BtsIMutI CAGTG 7 cut(s) 455, 951, 1188, 1310, 2140, 2399, 3117
BveI ACCTGC 3 cut(s) 590, 850, 1003
Cac8I GCNNGC 6 cut(s) 446, 889, 1600, 1893, 2631, 3377
CaiI CAGNNNCTG 1 cut(s) 992
CciI TCATGA 1 cut(s) 1291
CfoI GCGC 7 cut(s) 254, 323, 379, 418, 1045, 2452, 3413
Cfr10I RCCGGY 1 cut(s) 2539
Cfr13I GGNCC 4 cut(s) 472, 948, 1726, 1889
CseI GACGC 2 cut(s) 185, 1656
Csp6I GTAC 5 cut(s) 1496, 1611, 1864, 2565, 2768
CviQI GTAC 5 cut(s) 1496, 1611, 1864, 2565, 2768
EaeI YGGCCR 1 cut(s) 3281
Eam1104I CTCTTC 5 cut(s) 36, 980, 2482, 3177, 3564
EarI CTCTTC 5 cut(s) 36, 980, 2482, 3177, 3564
EciI GGCGGA 2 cut(s) 25, 46
Ecl136II GAGCTC 1 cut(s) 3259
Eco130I CCWWGG 4 cut(s) 1425, 1672, 3119, 3609
Eco147I AGGCCT 1 cut(s) 782
Eco24I GRGCYC 2 cut(s) 3083, 3261
Eco31I GGTCTC 2 cut(s) 1635, 3667
Eco32I GATATC 1 cut(s) 3538
Eco47I GGWCC 2 cut(s) 948, 1726
Eco47III AGCGCT 1 cut(s) 378
Eco53kI GAGCTC 1 cut(s) 3259
Eco57I CTGAAG 5 cut(s) 275, 2040, 3018, 3285, 3497
Eco81I CCTNAGG 1 cut(s) 3309
Eco88I CYCGRG 1 cut(s) 514
EcoICRI GAGCTC 1 cut(s) 3259
EcoNI CCTNNNNNAGG 1 cut(s) 569
EcoRI GAATTC 2 cut(s) 1021, 1838
EcoRII CCWGG 1 cut(s) 2276
EcoRV GATATC 1 cut(s) 3538
EcoT14I CCWWGG 4 cut(s) 1425, 1672, 3119, 3609
EcoT22I ATGCAT 1 cut(s) 1971
EcoT38I GRGCYC 2 cut(s) 3083, 3261
ErhI CCWWGG 4 cut(s) 1425, 1672, 3119, 3609
FalI AAGNNNNNCTT 4 cut(s) 959, 991, 1112, 1144
FaqI GGGAC 3 cut(s) 1654, 2303, 2509
FauI CCCGC 1 cut(s) 265
FbaI TGATCA 1 cut(s) 1519
FblI GTMKAC 2 cut(s) 558, 2513
FokI GGATG 4 cut(s) 167, 315, 1760, 2936
FriOI GRGCYC 2 cut(s) 3083, 3261
FspBI CTAG 8 cut(s) 225, 1257, 1802, 2342, 2604, 2634, 2978, 3270
GlaI GCGC 7 cut(s) 253, 322, 378, 417, 1044, 2451, 3412
GsuI CTGGAG 5 cut(s) 422, 797, 915, 1662, 2997
HaeII RGCGCY 4 cut(s) 255, 380, 419, 3414
HaeIII GGCC 4 cut(s) 474, 782, 1891, 3283
HapII CCGG 9 cut(s) 324, 332, 365, 470, 634, 802, 1887, 2540, 3280
HgaI GACGC 2 cut(s) 185, 1656
HhaI GCGC 7 cut(s) 254, 323, 379, 418, 1045, 2452, 3413
Hin1I GRCGYC 2 cut(s) 177, 546
Hin6I GCGC 7 cut(s) 252, 321, 377, 416, 1043, 2450, 3411
HinP1I GCGC 7 cut(s) 252, 321, 377, 416, 1043, 2450, 3411
HindIII AAGCTT 4 cut(s) 287, 968, 3000, 3021
HpaII CCGG 9 cut(s) 324, 332, 365, 470, 634, 802, 1887, 2540, 3280
Hpy166II GTNNAC 6 cut(s) 550, 559, 1769, 2416, 2514, 3220
Hpy8I GTNNAC 6 cut(s) 550, 559, 1769, 2416, 2514, 3220
Hpy99I CGWCG 2 cut(s) 179, 2658
HpyCH4III ACNGT 7 cut(s) 389, 717, 788, 1588, 1927, 2601, 3465
HpyCH4IV ACGT 3 cut(s) 546, 792, 3518
HpySE526I ACGT 3 cut(s) 546, 792, 3518
Hsp92I GRCGYC 2 cut(s) 177, 546
HspAI GCGC 7 cut(s) 252, 321, 377, 416, 1043, 2450, 3411
Ksp22I TGATCA 1 cut(s) 1519
LweI GCATC 9 cut(s) 280, 337, 1688, 1978, 2047, 2745, 2776, 2980, 3219
MaeI CTAG 8 cut(s) 225, 1257, 1802, 2342, 2604, 2634, 2978, 3270
MaeII ACGT 3 cut(s) 546, 792, 3518
MaeIII GTNAC 6 cut(s) 788, 1252, 1275, 1975, 2233, 2967
MbiI CCGCTC 1 cut(s) 18
MflI RGATCY 7 cut(s) 227, 518, 1078, 1432, 2330, 2834, 3149
MhlI GDGCHC 2 cut(s) 3083, 3261
MlyI GAGTC 7 cut(s) 404, 413, 564, 2659, 3205, 3225, 3293
MmeI TCCRAC 6 cut(s) 153, 198, 333, 387, 1809, 2514
Mph1103I ATGCAT 1 cut(s) 1971
MroXI GAANNNNTTC 4 cut(s) 45, 341, 851, 3482
MslI CAYNNNNRTG 3 cut(s) 2220, 2634, 3645
MspA1I CMGCKG 2 cut(s) 652, 3203
MspCI CTTAAG 3 cut(s) 1685, 2149, 2830
MspI CCGG 9 cut(s) 324, 332, 365, 470, 634, 802, 1887, 2540, 3280
MspR9I CCNGG 6 cut(s) 325, 366, 471, 803, 1888, 2278
MvaI CCWGG 1 cut(s) 2278
MvnI CGCG 2 cut(s) 570, 2264
NciI CCSGG 5 cut(s) 325, 366, 471, 803, 1888
NcoI CCATGG 1 cut(s) 1425
NlaIV GGNNCC 4 cut(s) 14, 2538, 3126, 3624
NmeAIII GCCGAG 2 cut(s) 392, 500
NmuCI GTSAC 4 cut(s) 788, 1275, 1975, 2233
NsiI ATGCAT 1 cut(s) 1971
NspI RCATGY 6 cut(s) 1602, 2219, 2633, 2690, 3101, 3379
PaeI GCATGC 3 cut(s) 1602, 2633, 3379
PaeR7I CTCGAG 1 cut(s) 514
PagI TCATGA 1 cut(s) 1291
PaqCI CACCTGC 1 cut(s) 590
PceI AGGCCT 1 cut(s) 782
PciI ACATGT 2 cut(s) 2215, 3097
PcsI WCGNNNNNNNCGW 2 cut(s) 431, 567
PdmI GAANNNNTTC 4 cut(s) 45, 341, 851, 3482
PflFI GACNNNGTC 1 cut(s) 1403
PflMI CCANNNNNTGG 1 cut(s) 352
PleI GAGTC 7 cut(s) 404, 412, 563, 2658, 3204, 3224, 3293
PpsI GAGTC 7 cut(s) 404, 412, 563, 2658, 3204, 3224, 3293
PscI ACATGT 2 cut(s) 2215, 3097
PsiI TTATAA 1 cut(s) 938
Psp124BI GAGCTC 1 cut(s) 3261
Psp6I CCWGG 1 cut(s) 2276
PspGI CCWGG 1 cut(s) 2276
PspN4I GGNNCC 4 cut(s) 14, 2538, 3126, 3624
PspPI GGNCC 4 cut(s) 472, 948, 1726, 1889
PstI CTGCAG 2 cut(s) 2100, 2767
PstNI CAGNNNCTG 1 cut(s) 992
PsuI RGATCY 7 cut(s) 227, 518, 1078, 1432, 2330, 2834, 3149
PsyI GACNNNGTC 1 cut(s) 1403
PvuII CAGCTG 1 cut(s) 3203
RsaI GTAC 5 cut(s) 1497, 1612, 1865, 2566, 2769
RsaNI GTAC 5 cut(s) 1496, 1611, 1864, 2565, 2768
RseI CAYNNNNRTG 3 cut(s) 2220, 2634, 3645
SacI GAGCTC 1 cut(s) 3261
Sau96I GGNCC 4 cut(s) 472, 948, 1726, 1889
ScaI AGTACT 1 cut(s) 1865
SchI GAGTC 7 cut(s) 404, 413, 564, 2659, 3205, 3225, 3293
ScrFI CCNGG 6 cut(s) 325, 366, 471, 803, 1888, 2278
SduI GDGCHC 2 cut(s) 3083, 3261
SfaNI GCATC 9 cut(s) 280, 337, 1688, 1978, 2047, 2745, 2776, 2980, 3219
SfcI CTRYAG 4 cut(s) 2096, 2763, 3414, 3461
Sfr274I CTCGAG 1 cut(s) 514
SinI GGWCC 2 cut(s) 948, 1726
SlaI CTCGAG 1 cut(s) 514
SmiMI CAYNNNNRTG 3 cut(s) 2220, 2634, 3645
SmlI CTYRAG 5 cut(s) 514, 1527, 1685, 2149, 2830
SmoI CTYRAG 5 cut(s) 514, 1527, 1685, 2149, 2830
SphI GCATGC 3 cut(s) 1602, 2633, 3379
SseBI AGGCCT 1 cut(s) 782
SsiI CCGC 8 cut(s) 10, 16, 36, 57, 258, 568, 650, 2264
SspMI CTAG 8 cut(s) 225, 1257, 1802, 2342, 2604, 2634, 2978, 3270
SstI GAGCTC 1 cut(s) 3261
StuI AGGCCT 1 cut(s) 782
StyD4I CCNGG 6 cut(s) 323, 364, 469, 801, 1886, 2276
StyI CCWWGG 4 cut(s) 1425, 1672, 3119, 3609
TaaI ACNGT 7 cut(s) 389, 717, 788, 1588, 1927, 2601, 3465
TaiI ACGT 3 cut(s) 549, 795, 3521
TaqI TCGA 9 cut(s) 284, 515, 588, 594, 963, 1088, 2206, 3062, 3552
TatI WGTACW 5 cut(s) 1495, 1610, 1863, 2564, 2767
TauI GCSGC 3 cut(s) 13, 652, 2267
TscAI CASTG 7 cut(s) 455, 958, 1188, 1317, 2140, 2399, 3117
TseFI GTSAC 4 cut(s) 788, 1275, 1975, 2233
Tsp45I GTSAC 4 cut(s) 788, 1275, 1975, 2233
TspGWI ACGGA 2 cut(s) 744, 2513
TspRI CASTG 7 cut(s) 455, 958, 1188, 1317, 2140, 2399, 3117
Tth111I GACNNNGTC 1 cut(s) 1403
Van91I CCANNNNNTGG 1 cut(s) 352
Vha464I CTTAAG 3 cut(s) 1685, 2149, 2830
VpaK11BI GGWCC 2 cut(s) 948, 1726
XagI CCTNNNNNAGG 1 cut(s) 569
XapI RAATTY 6 cut(s) 1021, 1260, 1658, 1838, 2196, 3436
XbaI TCTAGA 1 cut(s) 2341
XceI RCATGY 6 cut(s) 1602, 2219, 2633, 2690, 3101, 3379
XcmI CCANNNNNNNNNTGG 2 cut(s) 2126, 3616
XhoI CTCGAG 1 cut(s) 514
XmiI GTMKAC 2 cut(s) 558, 2513
XmnI GAANNNNTTC 4 cut(s) 45, 341, 851, 3482
XspI CTAG 8 cut(s) 225, 1257, 1802, 2342, 2604, 2634, 2978, 3270
ZraI GACGTC 1 cut(s) 547
ZrmI AGTACT 1 cut(s) 1865
Zsp2I ATGCAT 1 cut(s) 1971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.