Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006363

Physical Location & Seq

Genomic Coordinates Reverse (-)

25045151 .. 25047103

Gene Structure 1953 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G67080.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 663 bp

ATGGGTTTTTCTTCTTTCATTTCTCAGCCTTTGTCTTCATCTCTCTCGGTGATGAAACGCAACGTTTCTGCTAAAAGATCGGAACTTTGTCTTGATTCTTCAAAGATTAGATTAGATCATCGTTGGAGCTTCATTGGAGGATCAAGAATCTCTGTTCAGTCCAATTCTTACACCGTAGTTCACAAGAAATTCTCCGGTGTACGAGCTTCATGGTTAACTACTACTCAGATTGCAAGCAGTGTATTTGCGGTTGGAACTACCGCGGTTTTACCCTTCTATACTCTAATGGTTGTAGCACCAAAAGCTGAAATTACCAAGAAGTGTATGGAGAGTAGCGTACCGTATATCATCTTAGGCGTATTATATGTGTATTTGTTATACATTTCTTGGACACCCGAGACGCTCAAATACATGTTTTCTAGTAAATACATGTTGCCAGAGTTGTCTGGAATAGCTAAAATGTTCTCAAGTGAAATGACTCTTGCTTCTGCTTGGATTCATCTTCTTGTTGTAGATCTTTTCGCTGCACGGCAAGTTTATAATGATGGGTTAGAGAACCAGATCGAGACGAGGCATTCGGTTTCACTTTGCCTTCTCTTCTGTCCGGTTGGAATCGTTTCGCATTTCGTAACCAAAGCTATAATCAACAACCAGTACAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009526 GO:0009536 GO:0009687 GO:0009688 GO:0009941 GO:0009987 GO:0016053 GO:0016106 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016122 GO:0016123 GO:0019222 GO:0019752 GO:0031323 GO:0031967 GO:0031975 GO:0032787 GO:0032928 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046148 GO:0046165 GO:0046394 GO:0050789 GO:0050794 GO:0065007 GO:0071704 GO:0072330 GO:0090322 GO:1901576 GO:1901615 GO:1901617 GO:1902644 GO:1902645 GO:2000377

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4281

Protein Analysis

220

Amino Acids

24.62

Weight (kDa)

9.45

Isoelectric Point (pI)

50.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABA4-like	PF14108	81 - 138	1.8e-12	ABA DEFICIENT 4-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006363)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67080 AT1G67080
fragaria_vesca	FvH4_5g20670 FvH4_5g20670
malus_domestica	MD00G1132400.v1.1 MD06G1045600.v1.1 MD06G1045700.v1.1 MD09G1253000.v1.1
prunus_persica	Prupe.3G157500_v2.0.a1 Prupe.5G053500_v2.0.a1
pyrus_communis	pycom04g04750 pycom06g03870 pycom09g16910
rosa_chinensis	RchiOBHm_Chr7g0193521 RchiOBHm_Chr7g0206351
rosa_laevigata	RLG00000003319
rosa_multiflora	Rmu_sc0003652.1_g000001 Rmu_sc0005065.1_g000015
rosa_roxburghii	Rroxscaffold_3G00251600
rosa_rugosa	Rorug07G0096300 Rorug07G0096300 Rorug07G0096300
rosa_samantha	Rh7AG228400 Rh7BG224800 Rh7CG243000 Rh7DG235700
rosa_wichuraiana	Rw7G019680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	540
AccII	CGCG	1 cut(s)	263
AciI	CCGC	3 cut(s)	248, 261, 263
AclI	AACGTT	1 cut(s)	63
AclWI	GGATC	1 cut(s)	148
AcsI	RAATTY	1 cut(s)	188
AfaI	GTAC	3 cut(s)	201, 339, 656
AflIII	ACRYGT	2 cut(s)	411, 429
AgsI	TTSAA	1 cut(s)	102
AluBI	AGCT	5 cut(s)	129, 206, 305, 455, 638
AluI	AGCT	5 cut(s)	129, 206, 305, 455, 638
Alw26I	GTCTC	2 cut(s)	392, 560
AlwI	GGATC	1 cut(s)	148
Ama87I	CYCGRG	1 cut(s)	395
ApeKI	GCWGC	1 cut(s)	524
ApoI	RAATTY	1 cut(s)	188
ArsI	GACNNNNNNTTYG	2 cut(s)	559, 591
Asp700I	GAANNNNTTC	1 cut(s)	616
AsuHPI	GGTGA	1 cut(s)	61
AvaI	CYCGRG	1 cut(s)	395
BbsI	GAAGAC	1 cut(s)	27
BbvI	GCAGC	1 cut(s)	511
BccI	CCATC	1 cut(s)	539
BceAI	ACGGC	1 cut(s)	545
BcoDI	GTCTC	2 cut(s)	392, 560
BfaI	CTAG	1 cut(s)	420
BglII	AGATCT	1 cut(s)	514
BisI	GCNGC	1 cut(s)	525
BlsI	GCNGC	1 cut(s)	526
BmeT110I	CYCGRG	1 cut(s)	395
BpiI	GAAGAC	1 cut(s)	27
BpuEI	CTTGAG	1 cut(s)	451
BsaJI	CCNNGG	1 cut(s)	261
BsaWI	WCCGGW	2 cut(s)	194, 604
Bse1I	ACTGG	1 cut(s)	652
BseDI	CCNNGG	1 cut(s)	261
BseMII	CTCAG	2 cut(s)	38, 239
BseNI	ACTGG	1 cut(s)	652
BseXI	GCAGC	1 cut(s)	511
BsgI	GTGCAG	1 cut(s)	510
Bsh1236I	CGCG	1 cut(s)	263
BsiHKCI	CYCGRG	1 cut(s)	395
BsiSI	CCGG	2 cut(s)	195, 605
BsmAI	GTCTC	2 cut(s)	392, 560
BsmBI	CGTCTC	2 cut(s)	392, 560
BsmI	GAATGC	1 cut(s)	574
BsoBI	CYCGRG	1 cut(s)	395
Bsp143I	GATC	5 cut(s)	77, 115, 140, 514, 561
BspACI	CCGC	3 cut(s)	248, 261, 263
BspCNI	CTCAG	2 cut(s)	37, 238
BspFNI	CGCG	1 cut(s)	263
BspPI	GGATC	1 cut(s)	148
BsrI	ACTGG	1 cut(s)	652
BssECI	CCNNGG	1 cut(s)	261
BssMI	GATC	5 cut(s)	77, 115, 140, 514, 561
Bst4CI	ACNGT	2 cut(s)	175, 342
Bst6I	CTCTTC	1 cut(s)	602
BstC8I	GCNNGC	1 cut(s)	235
BstDEI	CTNAG	3 cut(s)	24, 225, 352
BstDSI	CCRYGG	1 cut(s)	261
BstFNI	CGCG	1 cut(s)	263
BstKTI	GATC	5 cut(s)	80, 118, 143, 517, 564
BstMAI	GTCTC	2 cut(s)	392, 560
BstMBI	GATC	5 cut(s)	77, 115, 140, 514, 561
BstMWI	GCNNNNNNNGC	1 cut(s)	302
BstNSI	RCATGY	2 cut(s)	415, 433
BstUI	CGCG	1 cut(s)	263
BstV1I	GCAGC	1 cut(s)	511
BstV2I	GAAGAC	1 cut(s)	27
BstX2I	RGATCY	1 cut(s)	514
BstYI	RGATCY	1 cut(s)	514
BtgI	CCRYGG	1 cut(s)	261
BtsI	GCAGTG	1 cut(s)	244
BtsIMutI	CAGTG	1 cut(s)	244
Cac8I	GCNNGC	1 cut(s)	235
Cfr42I	CCGCGG	1 cut(s)	264
CseI	GACGC	1 cut(s)	409
Csp6I	GTAC	3 cut(s)	200, 338, 655
CviAII	CATG	3 cut(s)	210, 412, 430
CviJI	RGCY	6 cut(s)	28, 129, 206, 305, 455, 638
CviKI_1	RGCY	6 cut(s)	28, 129, 206, 305, 455, 638
CviQI	GTAC	3 cut(s)	200, 338, 655
DdeI	CTNAG	3 cut(s)	24, 225, 352
DpnI	GATC	5 cut(s)	79, 117, 142, 516, 563
DpnII	GATC	5 cut(s)	77, 115, 140, 514, 561
Eam1104I	CTCTTC	1 cut(s)	602
EarI	CTCTTC	1 cut(s)	602
Eco88I	CYCGRG	1 cut(s)	395
Esp3I	CGTCTC	2 cut(s)	392, 560
FaeI	CATG	3 cut(s)	213, 415, 433
FatI	CATG	3 cut(s)	209, 411, 429
Fnu4HI	GCNGC	1 cut(s)	525
Fsp4HI	GCNGC	1 cut(s)	525
FspBI	CTAG	1 cut(s)	420
GluI	GCNGC	1 cut(s)	525
HapII	CCGG	2 cut(s)	195, 605
HgaI	GACGC	1 cut(s)	409
Hin1II	CATG	3 cut(s)	213, 415, 433
HincII	GTYRAC	1 cut(s)	216
HindII	GTYRAC	1 cut(s)	216
HinfI	GANTC	5 cut(s)	95, 147, 478, 496, 612
HpaI	GTTAAC	1 cut(s)	216
HpaII	CCGG	2 cut(s)	195, 605
HphI	GGTGA	1 cut(s)	61
Hpy166II	GTNNAC	3 cut(s)	181, 200, 216
Hpy188I	TCNGA	2 cut(s)	82, 228
Hpy188III	TCNNGA	4 cut(s)	92, 144, 447, 565
Hpy8I	GTNNAC	3 cut(s)	181, 200, 216
HpyAV	CCTTC	2 cut(s)	283, 602
HpyCH4III	ACNGT	2 cut(s)	175, 342
HpyCH4IV	ACGT	1 cut(s)	63
HpyCH4V	TGCA	2 cut(s)	233, 527
HpyF10VI	GCNNNNNNNGC	1 cut(s)	302
HpyF3I	CTNAG	3 cut(s)	24, 225, 352
HpySE526I	ACGT	1 cut(s)	63
Hsp92II	CATG	3 cut(s)	213, 415, 433
KspAI	GTTAAC	1 cut(s)	216
KspI	CCGCGG	1 cut(s)	264
Kzo9I	GATC	5 cut(s)	77, 115, 140, 514, 561
LmnI	GCTCC	1 cut(s)	126
LpnPI	CCDG	5 cut(s)	208, 432, 450, 572, 618
Lsp1109I	GCAGC	1 cut(s)	511
MaeI	CTAG	1 cut(s)	420
MaeII	ACGT	1 cut(s)	63
MaeIII	GTNAC	1 cut(s)	628
MalI	GATC	5 cut(s)	79, 117, 142, 516, 563
MboI	GATC	5 cut(s)	77, 115, 140, 514, 561
MboII	GAAGA	5 cut(s)	3, 27, 90, 494, 589
MflI	RGATCY	1 cut(s)	514
MluCI	AATT	3 cut(s)	163, 188, 309
MlyI	GAGTC	1 cut(s)	472
MmeI	TCCRAC	3 cut(s)	104, 232, 589
MnlI	CCTC	2 cut(s)	131, 564
MroXI	GAANNNNTTC	1 cut(s)	616
MseI	TTAA	1 cut(s)	215
MspA1I	CMGCKG	1 cut(s)	263
MspI	CCGG	2 cut(s)	195, 605
Mva1269I	GAATGC	1 cut(s)	574
MvnI	CGCG	1 cut(s)	263
MwoI	GCNNNNNNNGC	1 cut(s)	302
NdeII	GATC	5 cut(s)	77, 115, 140, 514, 561
NlaIII	CATG	3 cut(s)	213, 415, 433
NspI	RCATGY	2 cut(s)	415, 433
PciI	ACATGT	2 cut(s)	411, 429
PctI	GAATGC	1 cut(s)	574
PdmI	GAANNNNTTC	1 cut(s)	616
PfeI	GAWTC	4 cut(s)	95, 147, 496, 612
PkrI	GCNGC	1 cut(s)	526
PleI	GAGTC	1 cut(s)	472
PpsI	GAGTC	1 cut(s)	472
PscI	ACATGT	2 cut(s)	411, 429
PsiI	TTATAA	1 cut(s)	540
Psp1406I	AACGTT	1 cut(s)	63
PsuI	RGATCY	1 cut(s)	514
RsaI	GTAC	3 cut(s)	201, 339, 656
RsaNI	GTAC	3 cut(s)	200, 338, 655
SacII	CCGCGG	1 cut(s)	264
SaqAI	TTAA	1 cut(s)	215
SatI	GCNGC	1 cut(s)	525
Sau3AI	GATC	5 cut(s)	77, 115, 140, 514, 561
SchI	GAGTC	1 cut(s)	472
SetI	ASST	6 cut(s)	66, 131, 208, 307, 457, 640
Sfr303I	CCGCGG	1 cut(s)	264
SgrBI	CCGCGG	1 cut(s)	264
SmlI	CTYRAG	1 cut(s)	466
SmoI	CTYRAG	1 cut(s)	466
Sse9I	AATT	3 cut(s)	163, 188, 309
SsiI	CCGC	3 cut(s)	248, 261, 263
SspMI	CTAG	1 cut(s)	420
TaaI	ACNGT	2 cut(s)	175, 342
TaiI	ACGT	1 cut(s)	66
TaqI	TCGA	1 cut(s)	564
TasI	AATT	3 cut(s)	163, 188, 309
TatI	WGTACW	1 cut(s)	654
TfiI	GAWTC	4 cut(s)	95, 147, 496, 612
Tru1I	TTAA	1 cut(s)	215
Tru9I	TTAA	1 cut(s)	215
TscAI	CASTG	1 cut(s)	244
TseI	GCWGC	1 cut(s)	524
TspDTI	ATGAA	6 cut(s)	7, 27, 68, 121, 198, 488
TspRI	CASTG	1 cut(s)	244
XapI	RAATTY	1 cut(s)	188
XceI	RCATGY	2 cut(s)	415, 433
XcmI	CCANNNNNNNNNTGG	1 cut(s)	322
XmnI	GAANNNNTTC	1 cut(s)	616
XspI	CTAG	1 cut(s)	420

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.