AT1G68040

methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0008919
Physical Location & Seq
Forward (+)
25502864 .. 25505263
2400 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G68040.1

Sequence Viewer

Length: 1092 bp
ATGGGAAAAGTGGAGATTGTTCGTAACTCACTTCCTATGAGTGGGGGAGATGGTCCGAACAGCTACTCTAAGAATTCTCATTTGCAGAGAAAAACAACAAGTTTGTTGAAAGAGAAAATAGACAAACTGGTATTAGAGAAACTCAATGCAAAAACCCTAATCTCATCTGACTCCAACACATTCCGGATAGCCGATCTTGGTTGTGCAACTGGACCAAATACATTCTTTCTCGTTGACAACATCATCAAATCCATTGAAACCAGCTTAAGAAAATCAAACTCGTCAAAACCAGAGTTTCTTGTCTTCTTCAACGACCTCCCACAAAACGACTTCAACACTCTCTTCACATCTCTCCCTCAAGACCGGAGTTACTTGGCGGTCGGAGTCCCGGGTTCGTTCTACGGCCGTGTCCTTCCTCAATCCTCCGTTCATATTGTAGTGACGATGGGGGCCACACACTGGCTATCGAGTGTACCAAAAGAGGTGTTGGACAAAAGCTCCAAGGCGTGGAATAAAGGCAAGGTTCACTACTCAAATGCCGCGGATGAAGTTGTGAAGGCTTATAGAGATCAGTTTGGTCGGGACATGGAGAAGTTTCTAGAAGCTAGGGCTACAGAAATAGTAAGTGGAGGTCTTTTGGTTGTTGGAATGTGTGGGATTCCTAAAGGAATGCCTTTCTCCAATCTTGCCGACAGTATCATGTATACGTCCATGGCTGATGTTCTCACTCAAATGCATTCCGAGGGTTTGATCAGCGAAGAGCAAGTCGATACCTTCAACATACCTATCTACTCAGCAACGCCTGAGGAGGTAACAGTCCTGGTAGTGAAAAATGGATGCTTCACTGTCGAATCTATGGAGCTGATGGACCCAACGGCCTGGCTCAAACGGCCGACGAACGTGGAGGATGTTAGGCATTGGATGGTTTGCATAAAGGCAACAATGGGATCTCTCTTCATCAACCATTTTGGTGAACATCTCCTCGACGATGTCTTCGACCGTCTCACCGCAAAACTGGTTGGACTCACCGAGAAAATTGAATCCAGCTACCGTGAGAAGGTCATGTTGTTCTTTGCGTTGCAACGAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_7

Protein Analysis

363

Amino Acids

40.49

Weight (kDa)

6.47

Isoelectric Point (pI)

37.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_7 PF03492 55 - 362 6.9e-102 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 459, 507
AccI GTMKAC 1 cut(s) 704
AccII CGCG 1 cut(s) 542
AccIII TCCGGA 1 cut(s) 183
AciI CCGC 4 cut(s) 377, 540, 542, 1008
AclWI GGATC 1 cut(s) 955
AcoI YGGCCR 2 cut(s) 403, 890
AcsI RAATTY 1 cut(s) 73
AfaI GTAC 1 cut(s) 474
AfiI CCNNNNNNNGG 4 cut(s) 41, 459, 507, 1057
AflII CTTAAG 1 cut(s) 265
AgsI TTSAA 6 cut(s) 109, 257, 310, 334, 778, 1040
AjnI CCWGG 2 cut(s) 819, 878
AluBI AGCT 6 cut(s) 63, 264, 498, 605, 862, 1047
AluI AGCT 6 cut(s) 63, 264, 498, 605, 862, 1047
Alw26I GTCTC 1 cut(s) 1007
AlwI GGATC 1 cut(s) 955
Ama87I CYCGRG 1 cut(s) 388
Aor13HI TCCGGA 1 cut(s) 183
AoxI GGCC 4 cut(s) 403, 450, 876, 890
ApoI RAATTY 1 cut(s) 73
ArsI GACNNNNNNTTYG 4 cut(s) 750, 782, 977, 1009
AspS9I GGNCC 4 cut(s) 53, 212, 450, 868
AsuC2I CCSGG 2 cut(s) 389, 390
AsuHPI GGTGA 3 cut(s) 983, 997, 1018
AvaI CYCGRG 1 cut(s) 388
AvaII GGWCC 3 cut(s) 53, 212, 868
AxyI CCTNAGG 1 cut(s) 804
BbsI GAAGAC 2 cut(s) 295, 985
BccI CCATC 4 cut(s) 44, 439, 859, 916
BceAI ACGGC 4 cut(s) 390, 418, 891, 905
BciT130I CCWGG 2 cut(s) 821, 880
BclI TGATCA 1 cut(s) 750
BcnI CCSGG 2 cut(s) 389, 390
BcoDI GTCTC 1 cut(s) 1007
BfaI CTAG 2 cut(s) 599, 606
BfmI CTRYAG 1 cut(s) 612
BfrI CTTAAG 1 cut(s) 265
BisI GCNGC 1 cut(s) 540
BlsI GCNGC 1 cut(s) 541
Bme1390I CCNGG 4 cut(s) 389, 390, 821, 880
Bme18I GGWCC 3 cut(s) 53, 212, 868
BmeT110I CYCGRG 1 cut(s) 388
BmgT120I GGNCC 4 cut(s) 53, 212, 450, 868
BmiI GGNNCC 2 cut(s) 451, 870
BmrFI CCNGG 4 cut(s) 389, 390, 821, 880
BmsI GCATC 1 cut(s) 827
BpiI GAAGAC 2 cut(s) 295, 985
BpuEI CTTGAG 1 cut(s) 342
BpuMI CCSGG 2 cut(s) 389, 390
BsaJI CCNNGG 5 cut(s) 388, 501, 540, 711, 741
BsaWI WCCGGW 2 cut(s) 183, 363
BsaXI ACNNNNNCTCC 2 cut(s) 482, 512
Bsc4I CCNNNNNNNGG 4 cut(s) 41, 459, 507, 1057
Bse1I ACTGG 4 cut(s) 132, 214, 464, 1020
Bse21I CCTNAGG 1 cut(s) 804
BseAI TCCGGA 1 cut(s) 183
BseBI CCWGG 2 cut(s) 821, 880
BseDI CCNNGG 5 cut(s) 388, 501, 540, 711, 741
BseGI GGATG 4 cut(s) 550, 842, 913, 927
BseLI CCNNNNNNNGG 4 cut(s) 41, 459, 507, 1057
BseMII CTCAG 2 cut(s) 795, 807
BseNI ACTGG 4 cut(s) 132, 214, 464, 1020
BseRI GAGGAG 2 cut(s) 821, 971
BseX3I CGGCCG 2 cut(s) 403, 890
Bsh1236I CGCG 1 cut(s) 542
Bsh1285I CGRYCG 4 cut(s) 381, 406, 893, 1000
BshFI GGCC 4 cut(s) 405, 452, 878, 892
BsiEI CGRYCG 4 cut(s) 381, 406, 893, 1000
BsiHKCI CYCGRG 1 cut(s) 388
BsiSI CCGG 3 cut(s) 184, 364, 389
BslFI GGGAC 2 cut(s) 371, 596
BslI CCNNNNNNNGG 4 cut(s) 41, 459, 507, 1057
BsmAI GTCTC 1 cut(s) 1007
BsmBI CGTCTC 1 cut(s) 1007
BsmFI GGGAC 2 cut(s) 371, 596
BsmI GAATGC 2 cut(s) 675, 736
BsnI GGCC 4 cut(s) 405, 452, 878, 892
BsoBI CYCGRG 1 cut(s) 388
Bsp13I TCCGGA 1 cut(s) 183
Bsp143I GATC 4 cut(s) 193, 568, 750, 947
Bsp19I CCATGG 1 cut(s) 711
BspACI CCGC 4 cut(s) 377, 540, 542, 1008
BspANI GGCC 4 cut(s) 405, 452, 878, 892
BspCNI CTCAG 2 cut(s) 796, 806
BspEI TCCGGA 1 cut(s) 183
BspFNI CGCG 1 cut(s) 542
BspLI GGNNCC 2 cut(s) 451, 870
BspPI GGATC 1 cut(s) 955
BspQI GCTCTTC 1 cut(s) 753
BspTI CTTAAG 1 cut(s) 265
BsrI ACTGG 4 cut(s) 132, 214, 464, 1020
BssECI CCNNGG 5 cut(s) 388, 501, 540, 711, 741
BssMI GATC 4 cut(s) 193, 568, 750, 947
BssNAI GTATAC 1 cut(s) 705
BssT1I CCWWGG 2 cut(s) 501, 711
Bst1107I GTATAC 1 cut(s) 705
Bst2UI CCWGG 2 cut(s) 821, 880
Bst4CI ACNGT 5 cut(s) 695, 817, 847, 1001, 1052
Bst6I CTCTTC 3 cut(s) 347, 753, 959
BstAFI CTTAAG 1 cut(s) 265
BstDEI CTNAG 3 cut(s) 69, 793, 804
BstDSI CCRYGG 2 cut(s) 540, 711
BstF5I GGATG 4 cut(s) 550, 842, 913, 927
BstFNI CGCG 1 cut(s) 542
BstKTI GATC 4 cut(s) 196, 571, 753, 950
BstMAI GTCTC 1 cut(s) 1007
BstMBI GATC 4 cut(s) 193, 568, 750, 947
BstMCI CGRYCG 4 cut(s) 381, 406, 893, 1000
BstMWI GCNNNNNNNGC 1 cut(s) 889
BstNI CCWGG 2 cut(s) 821, 880
BstSCI CCNGG 4 cut(s) 387, 388, 819, 878
BstSFI CTRYAG 1 cut(s) 612
BstUI CGCG 1 cut(s) 542
BstV2I GAAGAC 2 cut(s) 295, 985
BstX2I RGATCY 1 cut(s) 947
BstXI CCANNNNNNTGG 1 cut(s) 879
BstYI RGATCY 1 cut(s) 947
BstZ17I GTATAC 1 cut(s) 705
BstZI CGGCCG 2 cut(s) 403, 890
Bsu36I CCTNAGG 1 cut(s) 804
BsuRI GGCC 4 cut(s) 405, 452, 878, 892
BtgI CCRYGG 2 cut(s) 540, 711
BtsCI GGATG 4 cut(s) 550, 842, 913, 927
BtsIMutI CAGTG 2 cut(s) 457, 843
Cfr13I GGNCC 4 cut(s) 53, 212, 450, 868
Cfr42I CCGCGG 1 cut(s) 543
Cfr9I CCCGGG 1 cut(s) 388
Csp6I GTAC 1 cut(s) 473
CviAII CATG 4 cut(s) 586, 700, 712, 1063
CviQI GTAC 1 cut(s) 473
DdeI CTNAG 3 cut(s) 69, 793, 804
DpnI GATC 4 cut(s) 195, 570, 752, 949
DpnII GATC 4 cut(s) 193, 568, 750, 947
EaeI YGGCCR 2 cut(s) 403, 890
EagI CGGCCG 2 cut(s) 403, 890
Eam1104I CTCTTC 3 cut(s) 347, 753, 959
EarI CTCTTC 3 cut(s) 347, 753, 959
EclXI CGGCCG 2 cut(s) 403, 890
Eco130I CCWWGG 2 cut(s) 501, 711
Eco47I GGWCC 3 cut(s) 53, 212, 868
Eco52I CGGCCG 2 cut(s) 403, 890
Eco81I CCTNAGG 1 cut(s) 804
Eco88I CYCGRG 1 cut(s) 388
EcoRI GAATTC 1 cut(s) 73
EcoRII CCWGG 2 cut(s) 819, 878
EcoT14I CCWWGG 2 cut(s) 501, 711
EcoT22I ATGCAT 1 cut(s) 738
ErhI CCWWGG 2 cut(s) 501, 711
Esp3I CGTCTC 1 cut(s) 1007
FaeI CATG 4 cut(s) 589, 703, 715, 1066
FaqI GGGAC 2 cut(s) 371, 596
FatI CATG 4 cut(s) 585, 699, 711, 1062
FbaI TGATCA 1 cut(s) 750
FblI GTMKAC 1 cut(s) 704
Fnu4HI GCNGC 1 cut(s) 540
FokI GGATG 4 cut(s) 557, 849, 920, 934
Fsp4HI GCNGC 1 cut(s) 540
FspBI CTAG 2 cut(s) 599, 606
GluI GCNGC 1 cut(s) 540
HaeIII GGCC 4 cut(s) 405, 452, 878, 892
HapII CCGG 3 cut(s) 184, 364, 389
Hin1II CATG 4 cut(s) 589, 703, 715, 1066
HincII GTYRAC 1 cut(s) 235
HindII GTYRAC 1 cut(s) 235
HinfI GANTC 6 cut(s) 170, 384, 658, 851, 1023, 1040
HpaII CCGG 3 cut(s) 184, 364, 389
HphI GGTGA 3 cut(s) 983, 997, 1018
Hpy166II GTNNAC 5 cut(s) 235, 473, 526, 705, 974
Hpy188I TCNGA 4 cut(s) 57, 169, 383, 742
Hpy188III TCNNGA 4 cut(s) 184, 359, 581, 599
Hpy8I GTNNAC 5 cut(s) 235, 473, 526, 705, 974
Hpy99I CGWCG 2 cut(s) 898, 989
HpyAV CCTTC 4 cut(s) 422, 550, 784, 1051
HpyCH4III ACNGT 5 cut(s) 695, 817, 847, 1001, 1052
HpyCH4IV ACGT 2 cut(s) 707, 900
HpyCH4V TGCA 6 cut(s) 85, 149, 206, 736, 930, 1081
HpyF10VI GCNNNNNNNGC 1 cut(s) 889
HpyF3I CTNAG 3 cut(s) 69, 793, 804
HpySE526I ACGT 2 cut(s) 707, 900
Hsp92II CATG 4 cut(s) 589, 703, 715, 1066
Kpn2I TCCGGA 1 cut(s) 183
Ksp22I TGATCA 1 cut(s) 750
KspI CCGCGG 1 cut(s) 543
Kzo9I GATC 4 cut(s) 193, 568, 750, 947
LguI GCTCTTC 1 cut(s) 753
LmnI GCTCC 2 cut(s) 503, 859
LweI GCATC 1 cut(s) 827
MaeI CTAG 2 cut(s) 599, 606
MaeII ACGT 2 cut(s) 707, 900
MaeIII GTNAC 4 cut(s) 23, 368, 439, 811
MalI GATC 4 cut(s) 195, 570, 752, 949
MboI GATC 4 cut(s) 193, 568, 750, 947
MboII GAAGA 6 cut(s) 295, 298, 334, 770, 946, 985
MflI RGATCY 1 cut(s) 947
MluCI AATT 2 cut(s) 73, 1035
MlyI GAGTC 3 cut(s) 164, 393, 1017
MmeI TCCRAC 5 cut(s) 198, 361, 468, 625, 1000
Mph1103I ATGCAT 1 cut(s) 738
MroI TCCGGA 1 cut(s) 183
MseI TTAA 1 cut(s) 266
MslI CAYNNNNRTG 2 cut(s) 731, 969
MspA1I CMGCKG 1 cut(s) 542
MspCI CTTAAG 1 cut(s) 265
MspI CCGG 3 cut(s) 184, 364, 389
MspR9I CCNGG 4 cut(s) 389, 390, 821, 880
Mva1269I GAATGC 2 cut(s) 675, 736
MvaI CCWGG 2 cut(s) 821, 880
MvnI CGCG 1 cut(s) 542
MwoI GCNNNNNNNGC 1 cut(s) 889
NciI CCSGG 2 cut(s) 389, 390
NcoI CCATGG 1 cut(s) 711
NdeII GATC 4 cut(s) 193, 568, 750, 947
NlaIII CATG 4 cut(s) 589, 703, 715, 1066
NlaIV GGNNCC 2 cut(s) 451, 870
NmuCI GTSAC 1 cut(s) 439
NsiI ATGCAT 1 cut(s) 738
PciSI GCTCTTC 1 cut(s) 753
PcsI WCGNNNNNNNCGW 1 cut(s) 993
PctI GAATGC 2 cut(s) 675, 736
PfeI GAWTC 3 cut(s) 658, 851, 1040
PflFI GACNNNGTC 1 cut(s) 989
PflMI CCANNNNNTGG 2 cut(s) 459, 507
PkrI GCNGC 1 cut(s) 541
PleI GAGTC 3 cut(s) 164, 392, 1017
PpsI GAGTC 3 cut(s) 164, 392, 1017
Psp6I CCWGG 2 cut(s) 819, 878
PspGI CCWGG 2 cut(s) 819, 878
PspN4I GGNNCC 2 cut(s) 451, 870
PspPI GGNCC 4 cut(s) 53, 212, 450, 868
PsuI RGATCY 1 cut(s) 947
PsyI GACNNNGTC 1 cut(s) 989
RsaI GTAC 1 cut(s) 474
RsaNI GTAC 1 cut(s) 473
RseI CAYNNNNRTG 2 cut(s) 731, 969
SacII CCGCGG 1 cut(s) 543
SapI GCTCTTC 1 cut(s) 753
SaqAI TTAA 1 cut(s) 266
SatI GCNGC 1 cut(s) 540
Sau3AI GATC 4 cut(s) 193, 568, 750, 947
Sau96I GGNCC 4 cut(s) 53, 212, 450, 868
SchI GAGTC 3 cut(s) 164, 393, 1017
ScrFI CCNGG 4 cut(s) 389, 390, 821, 880
SfaNI GCATC 1 cut(s) 827
SfcI CTRYAG 1 cut(s) 612
Sfr303I CCGCGG 1 cut(s) 543
SgrBI CCGCGG 1 cut(s) 543
SinI GGWCC 3 cut(s) 53, 212, 868
SmaI CCCGGG 1 cut(s) 390
SmiMI CAYNNNNRTG 2 cut(s) 731, 969
SmlI CTYRAG 2 cut(s) 265, 357
SmoI CTYRAG 2 cut(s) 265, 357
Sse9I AATT 2 cut(s) 73, 1035
SsiI CCGC 4 cut(s) 377, 540, 542, 1008
SspMI CTAG 2 cut(s) 599, 606
StyD4I CCNGG 4 cut(s) 387, 388, 819, 878
StyI CCWWGG 2 cut(s) 501, 711
TaaI ACNGT 5 cut(s) 695, 817, 847, 1001, 1052
TaiI ACGT 2 cut(s) 710, 903
TaqI TCGA 5 cut(s) 467, 768, 849, 984, 996
TasI AATT 2 cut(s) 73, 1035
TauI GCSGC 1 cut(s) 542
TfiI GAWTC 3 cut(s) 658, 851, 1040
Tru1I TTAA 1 cut(s) 266
Tru9I TTAA 1 cut(s) 266
TscAI CASTG 2 cut(s) 464, 850
TseFI GTSAC 1 cut(s) 439
Tsp45I GTSAC 1 cut(s) 439
TspDTI ATGAA 3 cut(s) 419, 561, 946
TspGWI ACGGA 1 cut(s) 415
TspMI CCCGGG 1 cut(s) 388
TspRI CASTG 2 cut(s) 464, 850
Tth111I GACNNNGTC 1 cut(s) 989
Van91I CCANNNNNTGG 2 cut(s) 459, 507
Vha464I CTTAAG 1 cut(s) 265
VpaK11BI GGWCC 3 cut(s) 53, 212, 868
XapI RAATTY 1 cut(s) 73
XbaI TCTAGA 1 cut(s) 598
XmaI CCCGGG 1 cut(s) 388
XmiI GTMKAC 1 cut(s) 704
XspI CTAG 2 cut(s) 599, 606
Zsp2I ATGCAT 1 cut(s) 738
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.